GENSCAN 1.0	Date run:  6-Nov-116	Time: 02:09:27

Sequence gi568815593r:156929736_157157943 : 228208 bp : 42.12% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 PlyA -    242    237    6                               1.05
 1.05 Term -   8328   8189  140  1  2   47   34   139 0.579   1.54
 1.04 Intr -  19996  19916   81  2  0  124   75    81 0.815   9.09
 1.03 Intr -  22055  21777  279  0  0   50  101   299 0.999  23.93
 1.02 Intr -  25021  24680  342  2  0  110   99   141 0.649  11.88
 1.01 Init -  33463  33406   58  1  1   72   80    24 0.482   1.53
 1.00 Prom -  33530  33491   40                              -7.45

 2.00 Prom +  51054  51093   40                              -6.75
 2.01 Init +  55747  55892  146  0  2   81   58   116 0.757   7.54
 2.02 Intr +  64774  64813   40  1  1   93   84    22 0.009  -0.39
 2.03 Term +  77878  78156  279  0  0   71   41   250 0.813  13.06
 2.04 PlyA +  79704  79709    6                               1.05

 3.00 Prom +  83618  83657   40                              -3.65
 3.01 Init +  85439  85518   80  1  2   83   47    55 0.148   1.48
 3.02 Intr +  93981  94089  109  0  1  109   91    25 0.628   4.27
 3.03 Term +  95685  95840  156  2  0   65   48    77 0.553  -1.65
 3.04 PlyA +  96245  96250    6                               1.05

 4.11 PlyA -  98880  98875    6                               1.05
 4.10 Term - 100106  99998  109  1  1   76   47   119 0.913   3.60
 4.09 Intr - 103152 103119   34  1  1   82  121    16 0.935   0.66
 4.08 Intr - 107626 107512  115  1  1   88  106    84 0.976   9.30
 4.07 Intr - 107803 107704  100  0  1   36  106    39 0.149  -0.31
 4.06 Intr - 118353 118169  185  0  2   55  110    39 0.065   0.46
 4.05 Intr - 118849 118719  131  2  2   89   98    -9 0.059  -0.31
 4.04 Intr - 122919 122626  294  1  0   70   98   407 0.073  35.96
 4.03 Intr - 125798 125466  333  0  0  130  113   122 0.989  13.52
 4.02 Intr - 128220 128163   58  0  1  101  111     2 0.550   1.34
 4.01 Init - 130674 130564  111  0  0   58   61    93 0.455   3.86
 4.00 Prom - 154729 154690   40                              -3.65

 5.08 PlyA - 155102 155097    6                              -0.45
 5.07 Term - 157527 157367  161  1  2  102   36   228 0.969  16.12
 5.06 Intr - 165724 165517  208  1  1   88   -6   161 0.000   4.43
 5.05 Intr - 169166 169123   44  0  2  102   98    -9 0.242  -1.46
 5.04 Intr - 177227 176892  336  0  0   97  109   373 0.752  34.87
 5.03 Intr - 203662 203618   45  2  0   63   87    73 0.036   2.16
 5.02 Intr - 208054 207971   84  2  0   98   56    92 0.103   5.87
 5.01 Init - 209696 209072  625  2  1   81   40   511 0.521  41.15
 5.00 Prom - 213387 213348   40                              -5.15

 6.03 PlyA - 213981 213976    6                               1.05
 6.02 Term - 223091 222979  113  0  2   36   48   144 0.893   2.94
 6.01 Init - 226456 226444   13  1  1   86  100    -2 0.332   1.32

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 122914 122631  284  2  2   10   46   566 0.906  39.20
S.002 Intr - 165724 165571  154  1  1   88  101   221 0.999  22.12
S.003 Init - 179248 179191   58  1  1   35  108    77 0.976   4.10
S.004 Sngl - 212987 212724  264  2  0   91   38   177 0.843   8.12


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593r:156929736_157157943|GENSCAN_predicted_peptide_1|299_aa
MSKEPLILWLMIEFWWLYLTPVTSETVVTEVLGHRVTLPCLYSSWSHNSNSMCWGKDQCP
YSGCKEALIRTDGMRVTSRKSAKYRLQGTIPRGDVSLTILNPSESDSGVYCCRIEVPGWF
NDVKINVRLNLQRASTTTHRTATTTTRRTTTTSPTTTRQMTTTPAALPTTVVTTPDLTTG
TPLQMTTIAVFTTANTCLSLTPSTLPEEATGLLTPEPSKEGPILTAESETVLPSDSWSSV
ESTSADTVLLTSKGHGKVVGGIAILSASSAEGTEKGRGMKETTFVLTNAIVRKKEIGCT

>gi568815593r:156929736_157157943|GENSCAN_predicted_CDS_1|900_bp
atgtccaaagaacctctcattctctggctgatgattgagttttggtggctttacctgaca
ccagtcacttcagagactgttgtgacggaggttttgggtcaccgggtgactttgccctgt
ctgtactcatcctggtctcacaacagcaacagcatgtgctgggggaaagaccagtgcccc
tactccggttgcaaggaggcgctcatccgcactgatggaatgagggtgacctcaagaaag
tcagcaaaatatagacttcaggggactatcccgagaggtgatgtctccttgaccatctta
aaccccagtgaaagtgacagcggtgtgtactgctgccgcatagaagtgcctggctggttc
aacgatgtaaagataaacgtgcgcctgaatctacagagagcctcaacaaccacgcacaga
acagcaaccaccaccacacgcagaacaacaacaacaagccccaccaccacccgacaaatg
acaacaaccccagctgcacttccaacaacagtcgtgaccacacccgatctcacaaccgga
acaccactccagatgacaaccattgccgtcttcacaacagcaaacacgtgcctttcacta
accccaagcacccttccggaggaagccacaggtcttctgactcccgagccttctaaggaa
gggcccatcctcactgcagaatcagaaactgtcctccccagtgattcctggagtagtgtt
gagtctacttctgctgacactgtcctgctgacatccaaagggcatggaaaagttgtagga
ggaattgccattctcagtgcaagttcagcagaaggaacagagaaaggcagaggaatgaag
gaaaccacatttgtactcaccaatgccattgttaggaagaaagaaattggatgcacttga

>gi568815593r:156929736_157157943|GENSCAN_predicted_peptide_2|154_aa
MKKNQSKKAENSQNQNGSSPKDHNSSPAREQNWTVNEFDELTEEVSEDRLYKTNPTPHIM
PSGCRLLVVPPCWNLDSGSLIPTTPLGSAQLGTLYEGSNPTFHLGIVTVEALAGKGSTPQ
QASAWAPRLSHSTSETQVEAAKPSSLLHSVHLQA

>gi568815593r:156929736_157157943|GENSCAN_predicted_CDS_2|465_bp
atgaagaaaaaccagagcaaaaaggctgaaaattcccaaaaccagaatggctcttctcca
aaggatcacaactcctctccagcaagggaacaaaactggacggtgaatgaatttgatgaa
ttgacagaggaggtttcagaagatagattgtataaaacaaatcctacacctcatatcatg
ccatctggttgccggctgctggtggtgccaccatgctggaatctggacagtggcagtctt
attccaacaactccactaggcagtgcccaactggggactctgtatgagggctccaacccc
acatttcaccttggtattgtgacagtagaggctcttgcagggaagggctccaccccgcag
caggcttctgcctgggcacccaggctttcccattcaacctctgaaacccaggtagaagct
gccaagccttcttcactcttgcattctgtacacctacaggcctaa

>gi568815593r:156929736_157157943|GENSCAN_predicted_peptide_3|114_aa
MDEAGNHHSQQTITRTENQTLDVLTHREHYEPVTNIHKLDHENQSVNKLPLHFLGLPIFW
RLQKQPLTNQLKLHHFLPPNKHPLPQWFSTVPAGTLSVVTTGGCDWHLVGGGQG

>gi568815593r:156929736_157157943|GENSCAN_predicted_CDS_3|345_bp
atggatgaagctggaaaccatcattctcagcaaactatcacaagaacagaaaaccaaaca
ctggatgttctcactcatagagagcactacgaacctgtaacaaacatccacaaactagac
catgaaaaccagagtgtaaataagcttcccctacattttttgggtcttcctatattttgg
agactccagaagcagccgctgaccaaccagctaaagctacaccacttcctaccccccaac
aaacaccctctacctcagtggttctcaactgtgcccgcagggacattgtcagttgtcacc
actggaggatgtgactggcatctagtgggtggaggccagggatga

>gi568815593r:156929736_157157943|GENSCAN_predicted_peptide_4|489_aa
MENTATEKALGLRQVGKKALVAGAESAGERVVEEIYGADPIMHPQVVILSLILHLADSVA
GSVKVGGEAGPSVTLPCHYSGAVTSMCWNRGSCSLFTCQNGIVWTNGTHVTYRKDTRYKL
LGDLSRRDVSLTIENTAVSDSGVYCCRVEHRGWFNDMKITVSLEIVPPKVTTTPIVTTVP
TVTTVRTSTTVPTTTTVPMTTVPTTTVPTTMSIPTTTTVLTTMTVSTTTSVPTTTSIPTT
TSVPVTTTVSTFVPPMPLPRQNHEPVLGLQASATVPSCFVICKKDVIPRSCRMLVRIKWD
ERFGTWLQGGNSQTGFSVSSHTTSTTIINSDEDFCDRMCGVFSPYIKQWTPAVSLIQFLH
CLPGERVISHSCPRFSPYGYKLRSFGLTLMFQKSPSTNTGKCGWQLFLEHSLLTANTTKG
IYAGVCISVLVLLALLGVIIAKKYFFKKEVQQLSVSFSSLQIKALQNAVEKEVQAEDNIY
IENSLYATD

>gi568815593r:156929736_157157943|GENSCAN_predicted_CDS_4|1470_bp
atggagaacacagccacggaaaaggccttagggttgaggcaagttggaaagaaagctcta
gtagctggggctgagtcagcaggggagagagtggtagaagaaatctatggggctgatccc
ataatgcatcctcaagtggtcatcttaagcctcatcctacatctggcagattctgtagct
ggttctgtaaaggttggtggagaggcaggtccatctgtcacactaccctgccactacagt
ggagctgtcacatccatgtgctggaatagaggctcatgttctctattcacatgccaaaat
ggcattgtctggaccaatggaacccacgtcacctatcggaaggacacacgctataagcta
ttgggggacctttcaagaagggatgtctctttgaccatagaaaatacagctgtgtctgac
agtggcgtatattgttgccgtgttgagcaccgtgggtggttcaatgacatgaaaatcacc
gtatcattggagattgtgccacccaaggtcacgactactccaattgtcacaactgttcca
accgtcacgactgttcgaacgagcaccactgttccaacgacaacgactgttccaatgacg
actgttccaacgacaactgttccaacaacaatgagcattccaacgacaacgactgttctg
acgacaatgactgtttcaacgacaacgagcgttccaacgacaacgagcattccaacaaca
acaagtgttccagtgacaacaactgtctctacctttgttcctccaatgcctttgcccagg
cagaaccatgaaccagtgctgggattacaggcatcagccaccgtgcccagctgttttgtc
atttgtaaaaaggatgtaataccaagatcttgcagaatgcttgtgaggatcaaatgggat
gaaagatttgggacatggttacaggggggaaactcccaaactgggttttctgtctcttct
cacaccacgtcaacaacaatcatcaactcagatgaagacttctgtgaccgaatgtgtgga
gttttttccccatacatcaagcagtggacaccggctgtgtctttaattcagttcttacac
tgtctacccggagagagggtcatatcccacagttgtcctagattttcaccgtatggttat
aaactgagatcatttggtcttacccttatgttccagaagtccccaagcaccaatacaggt
aaatgtggctggcaactgttcctagaacatagtctactgacggccaataccactaaagga
atctatgctggagtctgtatttctgtcttggtgcttcttgctcttttgggtgtcatcatt
gccaaaaagtatttcttcaaaaaggaggttcaacaactaagtgtttcatttagcagcctt
caaattaaagctttgcaaaatgcagttgaaaaggaagtccaagcagaagacaatatctac
attgagaatagtctttatgccacggactaa

>gi568815593r:156929736_157157943|GENSCAN_predicted_peptide_5|500_aa
MGEPQQVSALPPPPMQYIKEYTDENIQEGLAPKPPPPIKDSYMMFGNQFQCDDLIIRPLE
SQGIERLHPMQFDHKKELRKLNMSILINFLDLLDILIRSPGSIKREEKLEDLKLLFVHVH
HLINEYRPHQARETLRVMMEVQKRQRLETAERFQKHLERVIEMIQNCLASLPDDLPHSEA
GMRVKTEPMDADDSNNCTGQNEHQRENSAAGWTVVSRISLEATEDGKDCQSGSLNDQQSC
EEPSKSDGIYGWSSEVEYRAEVGQNAYLPCFYTPAAPGNLVPVCWGKGACPVFECGNVVL
RTDERDVNYWTSRYWLNGDFRKGDVSLTIENVTLADSGIYCCRIQIPGIMNDEKFNLKLV
IKPAETQTLGSLPDINLTQISTLANELRDSRLANDLRDSGATIRIGIYIGAGICAGLALA
LIFGALIFKCKCFCFSLPLITNSSVRTRLANAVAEGIRSEENIYTIEENVYEVEEPNEYY
CYVSSRQQPSQPLGCRFAMP

>gi568815593r:156929736_157157943|GENSCAN_predicted_CDS_5|1503_bp
atgggtgaaccacagcaagtgagtgcacttccaccacctccaatgcaatatatcaaggaa
tatacggatgaaaatattcaagaaggcttagctcccaagcctccccctccaataaaagac
agttacatgatgtttggcaatcagttccaatgtgatgatcttatcatccgccctttggaa
agtcagggcatcgaacggcttcatcctatgcagtttgatcacaagaaagaactgagaaaa
cttaatatgtctatccttattaatttcttggaccttttagatattttaataaggagccct
gggagtataaaacgagaagagaaactagaagatcttaagctgctttttgtacacgtgcat
catcttataaatgaataccgaccccaccaagcaagagagaccttgagagtcatgatggag
gtccagaaacgtcaacggcttgaaacagctgagagatttcaaaagcacctggaacgagta
attgaaatgattcagaattgcttggcttctttgcctgatgatttgcctcattcagaagca
ggaatgagagtaaaaactgaaccaatggatgctgatgatagcaacaattgtactggacag
aatgaacatcaaagagaaaattcagctgctggttggacggtcgtatccaggataagtttg
gaagccaccgaagatggcaaagattgtcagtctggttctttgaatgaccaacaatcctgt
gaagaaccttctaaatctgatggtatttatggctggtcctcagaagtggaatacagagcg
gaggtcggtcagaatgcctatctgccctgcttctacaccccagccgccccagggaacctc
gtgcccgtctgctggggcaaaggagcctgtcctgtgtttgaatgtggcaacgtggtgctc
aggactgatgaaagggatgtgaattattggacatccagatactggctaaatggggatttc
cgcaaaggagatgtgtccctgaccatagagaatgtgactctagcagacagtgggatctac
tgctgccggatccaaatcccaggcataatgaatgatgaaaaatttaacctgaagttggtc
atcaaaccagcagagacacagacactggggagcctccctgatataaatctaacacaaata
tccacattggccaatgagttacgggactctagattggccaatgacttacgggactctgga
gcaaccatcagaataggcatctacatcggagcagggatctgtgctgggctggctctggct
cttatcttcggcgctttaattttcaaatgtaagtgtttttgtttctctctccctctgata
acaaattcttcagtgagaaccagattggcaaatgcagtagcagagggaattcgctcagaa
gaaaacatctataccattgaagagaacgtatatgaagtggaggagcccaatgagtattat
tgctatgtcagcagcaggcagcaaccctcacaacctttgggttgtcgctttgcaatgcca
tag

>gi568815593r:156929736_157157943|GENSCAN_predicted_peptide_6|41_aa
MENRMYNTKSEDQCELWTSGTNDASMSAHQNQMNHSGAGCR

>gi568815593r:156929736_157157943|GENSCAN_predicted_CDS_6|126_bp
atggaaaacagaatgtataacaccaagagtgaagaccagtgtgaactatggacttcaggt
actaatgatgcgtcaatgtcagctcatcaaaatcaaatgaaccactctggtgcaggatgt
cgatga