GENSCAN 1.0	Date run:  2-Nov-116	Time: 19:14:43

Sequence gi568815586r:42213070_42424102 : 211033 bp : 39.93% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Sngl +  13960  14283  324  0  0   72   55   156 0.731   6.49
 1.02 PlyA +  16337  16342    6                               1.05

 2.06 PlyA -  16402  16397    6                               1.05
 2.05 Term -  22928  22727  202  1  1   24   54   124 0.929  -1.52
 2.04 Intr -  24655  24530  126  0  0   83  117   214 0.995  22.67
 2.03 Intr -  25707  25236  472  1  1   74   50   282 0.763  14.21
 2.02 Intr -  33613  33446  168  2  0   52   55   151 0.332   7.20
 2.01 Init -  34318  34312    7  1  1   83   58     4 0.336  -2.15
 2.00 Prom -  36324  36285   40                              -2.75

 3.02 PlyA -  37084  37079    6                               1.05
 3.01 Sngl -  38596  37442 1155  1  0   60   48   382 0.987  27.39
 3.00 Prom -  39535  39496   40                              -6.15

 4.04 PlyA -  39692  39687    6                               1.05
 4.03 Term -  40871  40729  143  0  2   34   42   145 0.679   1.61
 4.02 Intr -  41411  41282  130  2  1   59   39   103 0.606   1.85
 4.01 Init -  47633  47538   96  2  0   79  115    27 0.803   4.86
 4.00 Prom -  51181  51142   40                              -4.45

 5.04 PlyA -  51925  51920    6                               1.05
 5.03 Term -  58056  57950  107  1  2  107   50    97 0.485   5.39
 5.02 Intr -  60080  59934  147  0  0   19   43   138 0.331   1.69
 5.01 Init -  61192  60856  337  1  1   59   49   213 0.687  10.00
 5.00 Prom -  61459  61420   40                              -7.05

 6.00 Prom +  65644  65683   40                              -3.65
 6.01 Init +  73845  74519  675  2  0   64   41   826 0.808  70.71
 6.02 Intr +  74627  74873  247  1  1   11   38   218 0.581   5.21
 6.03 Term +  74932  75491  560  2  2   63   55   611 0.976  48.82
 6.04 PlyA +  76882  76887    6                               1.05

 7.09 PlyA -  77618  77613    6                               1.05
 7.08 Term -  90084  89926  159  0  0   35   41   146 0.015   1.56
 7.07 Intr - 104378 104271  108  2  0   58   98   124 0.992   9.96
 7.06 Intr - 104829 104718  112  2  1   92  115    24 0.811   4.96
 7.05 Intr - 109377 109349   29  0  2   92  106    24 0.603   0.60
 7.04 Intr - 111035 110950   86  0  2   87  114     5 0.297   1.62
 7.03 Intr - 113286 113176  111  1  0   43   93    71 0.257   2.53
 7.02 Intr - 113887 113773  115  1  1   67   70    30 0.316  -1.80
 7.01 Init - 117336 117232  105  0  0   62   94   132 0.993  11.47
 7.00 Prom - 121811 121772   40                              -8.75

 8.00 Prom + 121958 121997   40                              -4.55
 8.01 Init + 122834 122905   72  1  0   61   84   129 0.972  10.92
 8.02 Intr + 138816 138980  165  2  0  100   30   150 0.657   9.64
 8.03 Intr + 171871 171927   57  0  0   86  105    37 0.689   3.36
 8.04 Intr + 180501 180620  120  2  0   54   94   127 0.998   9.67
 8.05 Intr + 185785 185925  141  0  0   58   94   127 0.977   9.93
 8.06 Intr + 188975 189049   75  1  0   87   62    43 0.401   0.39
 8.07 Intr + 194855 194902   48  1  0   53   97    51 0.238   0.46
 8.08 Term + 198201 198356  156  2  0   29   53    95 0.303  -2.95
 8.09 PlyA + 198537 198542    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  65819  65894   76  1  1   83   99    45 0.904   6.40
S.002 Init + 161805 162005  201  2  0   75   47   140 0.902   7.52


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:42213070_42424102|GENSCAN_predicted_peptide_1|107_aa
MKRSRCRDRPQPPPPDRREDGVQRAAELSQSLPPRRRAPPGRQRLEERTGPTGPEGKEQP
PALASQSAEIAASARPPPRLGSEECLCLAAHRLRREEPLCLAAQSGK

>gi568815586r:42213070_42424102|GENSCAN_predicted_CDS_1|324_bp
atgaagcggagccgctgccgcgaccgaccgcagccgccgccgcccgaccgccgggaggat
ggagttcagcgggcagcggagctgtctcagtctttgccgccgcgccggcgagcgccgccc
gggaggcagcggctggaggagcggacgggccccacggggcccgagggcaaggagcagccg
cctgccttggcctcccaaagtgccgagattgcagcctctgcccggccgccaccccgtctg
ggaagtgaggagtgtctctgcctggccgcccatcgtctgcgacgtgaggagcccctctgc
ctggctgcccagtctggaaagtga

>gi568815586r:42213070_42424102|GENSCAN_predicted_peptide_2|324_aa
MDVLSLLLQASLQQQQFLSLAEAESTLHFSRYLQNQLNKTLSETPASVGHSAALSEVWGG
GWVAKDSGGQESRSTWRSRAGTSVQTWTGLRTPAGPTLDQASHGMTEHPLPVGGTDVFLL
RGALEREAVPGSRGYQGGNGGTARRGGAGARGSRGHRGHPRTARRLTRRGCWAALAAFEV
SGAAAGWPARVTCAQAGVSPTAGGCVGSGGGSRARRPKRQPKPSSDEGYWDCSVCTFRNS
AEAFKCMMCDVRKGTSTRDSKEGGKLVSYSTASLGVRGTLRNRVGGGSSEEKKQAEYLAP
GRRRNIVHRGVGPGQRSGPSLKEA

>gi568815586r:42213070_42424102|GENSCAN_predicted_CDS_2|975_bp
atggacgtcctctccctgctcctccaagcatcgctccagcagcagcagttcctttctttg
gcagaggcagaatccactttacacttttcccggtacttgcagaaccagctgaataagacc
ttgtcagagacaccagcatcagtgggccacagtgctgccctttcagaggtgtggggcggg
ggctgggtagctaaggacagcggaggccaggaaagtcgttctacctggagatcccgggct
ggcacttctgtccagacctggacaggcctccgaacgccggccggccctaccttggaccag
gcttcgcacgggatgacggagcatcccctgccagtcggtgggacagacgttttcctcctc
agaggggctctggagcgcgaggcagtccccggcagccgggggtaccaagggggcaacggg
ggaacagcgcggagaggcggcgccggcgcccgaggcagccgcggccaccgcggccacccc
cgcaccgcccgccggctaactcgccgcgggtgctgggccgcgctggccgcgtttgaagtc
tccggcgcggctgctggttggccggcgagggtcacgtgcgcccaggcaggagtttccccg
acagctggaggctgcgtgggatccggcggcggctcccgagcgcggcggccgaagcggcag
ccgaagccgtcctcggatgagggttactgggactgtagcgtctgcaccttccggaacagc
gccgaggccttcaagtgcatgatgtgcgatgtgcggaagggcacctccacccgggacagc
aaggaaggggggaagctggtgtcctactccacagccagtcttggggttagaggaaccctg
agaaatagagtaggtggtggcagctcagaagagaagaaacaggctgaatacctggcacct
ggaagaagaaggaatatagtacacaggggagttggcccaggacagagaagtgggcctagt
ttaaaagaggcttga

>gi568815586r:42213070_42424102|GENSCAN_predicted_peptide_3|384_aa
MDKFLDTYTLPRLNQEEVESLSRPITGSEIEAIFNSLPTKKSPGQDRCTAEFYQRYKEEL
VPFLLKQLQSTEKEGILPNSFYEASIILIPKPGRDTTKKENFRPISLMNINVKILNKILP
NQIQQHIKKLIHHDQVGFIPGMQGWFNICKSINKIHHLNRTNDENQMIISIDAEKAFDKI
QQPFMLKTLNKPRIDGTYLKIIRTIYDRPTANIILNGQKLKAFPLKPSTRQGCPLSPLLF
NIVLEDLVREIRQEKEIKGIQLGKEEVKLSLFADDMIVYLENPIVSAQNLLKLLSNFSKV
SGYKLNVQKSQAFLYTNNRQTESQIMSELPFTITAKRIKYLGIQLTRDVKGLFKVNYKPL
LNEIKEDTNKWKNIPCSWLEESIS

>gi568815586r:42213070_42424102|GENSCAN_predicted_CDS_3|1155_bp
atggataaattcctggacacatacaccctcccaagactaaaccaggaagaagttgaatct
ctgagtagaccaataacaggttctgaaattgaggcaatatttaatagcctaccaaccaaa
aaaagtccaggacaagacagatgcacagctgaattctaccagaggtacaaagaggagctg
gtaccattccttctgaaacaattacaatcaacagaaaaagagggaatcctccctaactca
ttttatgaggccagcatcatcctgataccaaagcctggcagagacacaacaaaaaaagag
aattttaggccaatatccctgatgaacatcaatgtgaaaatcctcaataaaatactgcca
aaccaaatccagcagcacatcaaaaagcttatccaccatgatcaagtgggcttcatccct
gggatgcaaggctggttcaacatatgcaaatcaattaacaaaatccatcacttaaacaga
accaatgacgaaaaccaaatgattatctcaatagatgcagaaaaggcctttgacaaaatt
caacaacccttcatgctaaaaactctcaataaaccacgtattgatggaacgtatctcaaa
ataataagaactatttatgacagacccacagccaatatcatactgaatgggcaaaaactg
aaagcattccctttgaaacccagcacaagacaaggatgccctctctcaccactcctattc
aatatagtgttggaagatctggtcagggaaatcaggcaagagaaagaaataaagggtatt
caattaggaaaagaggaagtcaaattgtctctgtttgcagatgacatgattgtatattta
gaaaaccccatcgtctcagcccaaaatctccttaagctgctaagcaacttcagcaaagtc
tcaggatacaaactcaacgtgcaaaaatcacaagcattcctatacaccaataacagacaa
acagagagccaaatcatgagtgaactcccattcacaattactgcaaagagaataaaatac
ctaggaattcaacttacaagggatgtgaagggcctctttaaggtgaactacaaaccactg
ctcaatgaaataaaagaggacacaaacaaatggaagaacattccatgctcttggttagaa
gaatcaatatcatga

>gi568815586r:42213070_42424102|GENSCAN_predicted_peptide_4|122_aa
MGYLTIPLSCLGFHESEERKEQCSFSSPSGTQGISEQKAADSFSRPKRPCLTALKRAAVL
PARRSSSENGQTASSRSQLLASKEQNWMENKFDELTEVGIRRSVITNISELKEHVLTHHK
EA

>gi568815586r:42213070_42424102|GENSCAN_predicted_CDS_4|369_bp
atgggctacctgacaattccactaagctgtttgggcttccatgagtcagaggaaagaaaa
gagcaatgctccttttcaagccccagtggcactcagggcatatcagaacaaaaggcagca
gacagtttcagcagacctaaacgtccctgtctgacagctctgaagagagcagcggttctc
ccagcacggcgttcaagctctgagaacggacagactgcctcctcaagatcgcagctcctc
gccagtaaggaacaaaactggatggagaataagtttgatgaattgacagaagtaggcatc
agaaggtcggtaataacaaacatctctgagctaaaggagcatgttctaacccatcacaag
gaagcttaa

>gi568815586r:42213070_42424102|GENSCAN_predicted_peptide_5|196_aa
MTACWQPSQPSMALGASLASANILAALEEPFSLLLHGGSPSLGWPRSELAPSACGEVWRE
RHERELGLHPVLAGQLEFRVGVGLVGPTLGGAGRSCWSWAARGLTPAPAAAEANLVGKWR
TFVSSSGIVNAPISTLSKRTNQLSVKQTNRLSAKWTNQRDPGCERMNNVFSMGCRQSVIR
GQPVKTRAGETHSGEN

>gi568815586r:42213070_42424102|GENSCAN_predicted_CDS_5|591_bp
atgacagcgtgctggcagccctcgcagccctcgatggctctgggtgcctccttggcctcc
gcgaacattctggctgcgcttgaggagcccttcagcctgctgctgcacggtggaagccct
tctctgggctggccgaggtcggagctggctccctcggcttgcggggaggtgtggagggag
aggcatgagcgggaactggggctgcacccagtgcttgcgggccagctggagttccgggtg
ggtgtgggcttggtgggccccacactcggaggggccggccggtcctgctggtcctgggca
gcaaggggcttaacacccgcgccagcagctgcggaggctaatctagtggggaagtggaga
acttttgtgtctagctcagggattgtaaatgcaccaatcagcaccctgtcaaaacggacc
aatcagctctctgtaaaacagaccaatcggctctctgcaaaatggaccaatcagcgggat
ccggggtgtgagaggatgaacaacgtcttctcaatgggttgtagacaaagtgtgataaga
gggcagccagtgaagacaagagcaggggagacacattcaggggaaaactga

>gi568815586r:42213070_42424102|GENSCAN_predicted_peptide_6|493_aa
MNKLFIGNLSPAVTAEDLRQLFGDRKLPLAGQVLLKSRYAFVDYPDQNWAIRTIETLSGQ
VELHGKIMEVDYSVSIKLRSRNIPIRNIPPHLQWEVLDGLLAQYGTVENVEQVNTDTETA
VVNVTYATKEEVKIAMKKLSGHQFENHYFKISYIPDDEVSCPSPPQRAQRGDHSSWEQGQ
APGGSSQARQIDFPLRVLFPTQFVGAIIGKEGLTIKNITKQSRSRKEADEAKLAEEIPLK
ILAHNGLVGRLIGKEGRNLKKNEHETGTKITISSSQDLSIYNPERTITVKGTVEVCASAE
IEIMKKLPCTPIASLARSRIITLIQSRRLSISSSQPRVWAPSSGRKGHTSNSWRDSWEPP
SRSPLRQRKVIITWPPESQFKAQGRIFGKLKEENFFNPKEDVKLETHIRVPSSTAGRVIG
KGGKTVNELQNLISAEVIVPRDQTPDENEEMIVRIIGHFFASQTAQRKIREIVQQVKQQE
QKYPQGVASQRSK

>gi568815586r:42213070_42424102|GENSCAN_predicted_CDS_6|1482_bp
atgaacaagcttttcatcgggaacctgagccccgccgtcaccgccgaagacctccggcag
ctctttggggacaggaagctgcccctggcgggacaggtcctgctcaagtcccgctacgcc
ttcgtggactaccccgaccagaactgggccatccgcaccatcgagaccctctcgggtcaa
gtggaattgcatgggaaaatcatggaagttgattattcagtctctataaagctaaggagc
aggaacattccgattcgaaatatccctcctcacctgcagtgggaggtgttggatggactt
ttggctcaatatgggacagtggagaatgtggaacaagtcaacacagacacagagaccgct
gttgtcaacgtcacatatgcaacaaaagaagaagtaaaaatagccatgaagaagctaagc
gggcatcagtttgagaaccactacttcaagatttcctacatcccggatgacgaggtgagc
tgcccttcgccccctcagcgagcccagcgtggggaccactcttcctgggagcaaggccaa
gcccctgggggctcttctcaggccagacagattgatttcccactgcgtgtcctgttcccc
acccagtttgttggtgccatcatcggaaaggagggcttgaccataaagaacatcactaag
cagagccggtcccggaaagaggcagatgaggccaaactagccgaagagattcctctgaaa
atcttggcccacaatggcttggttggaagactgattggaaaagaaggcagaaatttgaag
aaaaatgaacatgaaacagggaccaagataacaatctcatcttcgcaggatttgagcata
tacaacccggaaagaaccatcactgtgaagggcacagtcgaggtctgtgccagtgctgag
atagagattatgaagaagctgccctgtacccccatcgccagtttggcccgttcccgcatc
atcactcttatccagagcaggagattgtcaatctcttcatcccaacccagggtgtgggcg
ccatcatcgggaagaaaggggcacacatcaaacagctggcgagattcgtgggagcctcca
tcaagatcgcccctgcgtcagcggaaggtcatcatcacctggccaccggaatcccagttc
aaggcccagggacggatctttgggaaactgaaagaagaaaacttttttaaccccaaagaa
gacgtgaagctggaaacccatatcagagtgccctcttccaccgctggccgggtgattggc
aaagggggcaagaccgtgaatgaactgcagaatttaatcagtgcagaagtcatcgtgcct
cgtgaccaaacgccagatgaaaatgaggaaatgatcgtcagaattatcgggcacttcttt
gctagccagactgcacagcgcaagatcagggaaattgtacaacaggtgaagcagcaggag
cagaaataccctcagggagtcgcctcacagcgcagcaagtga

>gi568815586r:42213070_42424102|GENSCAN_predicted_peptide_7|274_aa
MASWDEKDLTVPQPDTHEGSVLRRISKRGRPLAVEKTSASLWIDCAGSRRGCGFQAAGTQ
APREWLEAWSVCAELSHNSKAGESRTRHRKLPPTPPRLAARTRSASISGKEMSGGLAPSK
STVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQNCTR
AINNKQLFGRVIKASIAIDNGRAAEFIRRRNYFDKSKCYECGFVCDLILLGRWTRAWHIE
SCHTGPVPLQKGRGSTELVNTEVVHGRQGQKGTL

>gi568815586r:42213070_42424102|GENSCAN_predicted_CDS_7|825_bp
atggcctcgtgggacgagaaagacctgaccgtcccccagcccgacacccatgaagggtct
gtgctgaggaggatcagtaaaagaggaaggcctcttgcggttgagaagacatcggcttca
ctctggattgattgtgcaggctccaggagaggctgtgggttccaggctgctggaacgcag
gctcccagggagtggttagaggcctggtctgtatgtgctgaattgtcacacaattcaaag
gcaggagaatccaggacccgacacagaaaactcccgcccactcccccccgtttagcagcc
cgcacacgctctgcatccatctctgggaaagaaatgagtggtggattggctccaagtaag
agcacagtgtatgtatccaacttgcctttttccctgacaaacaatgacttgtaccggata
ttttccaagtatggcaaagttgtaaaggttaccatcatgaaagataaagataccaggaag
agtaaaggggttgcatttattttatttttggataaagactctgcacaaaactgtaccagg
gcaataaacaacaaacagttatttggtagagtgataaaagcaagcattgctattgacaat
ggaagagcagctgagttcatccgaaggcgaaactactttgataaatctaagtgttatgaa
tgtgggttcgtgtgtgacctgattcttctgggacgctggacaagagcctggcatatagag
agctgtcacactggccctgtgcccttgcagaaaggcagagggtccactgagctggttaac
actgaagttgtccacggacggcaaggccaaaagggcacactgtaa

>gi568815586r:42213070_42424102|GENSCAN_predicted_peptide_8|277_aa
MWSEGRYEYERIPRERAPPRSHPSDGYNRLVNIVPKKPPLLDRPGEGSYNRYYSHVDYRD
YDEGRSFSHDRRSGPPHRGSPCVLVPPTNGRMKEILKEVLDKPSRLTEKELAEAASKWAA
EKLEKSDESNLPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIASKT
KEIEQRWDFTLLPMLVANFWAREIYPPITGSMDVKPIDTQSQLYQKLLEYKWLLVIWMNC
IATLVADCRSYYLRWSLQQLLLLLLETVITAVTTVTA

>gi568815586r:42213070_42424102|GENSCAN_predicted_CDS_8|834_bp
atgtggtctgagggacgatatgaatatgaaagaattccgagagaacgagcacctcctcga
agtcatcccagtgatggctacaatagactagttaatattgtgccaaagaaaccaccactg
ctagacagacctggtgaaggaagctacaatagatattacagtcatgttgattaccgagac
tatgacgagggccgcagtttttctcatgatcgaagaagtggtccacctcacagaggaagt
ccgtgcgtcctggtgcctcctacaaacggcagaatgaaggaaatcctgaaagaggtgtta
gacaaacccagtaggctaactgaaaaggaacttgctgaggctgcaagcaagtgggctgct
gaaaagctagagaaatcagatgaaagtaacttgcctgaaatttctgagtatgaggcggga
tccacagcaccattgtttactgaccagccagaggaacctgagtcaaacacaacacatggg
atagaattatttgaagatagtcagctaaccactcgctctaaagcaatagcatcaaaaacc
aaagagattgaacagagatgggatttcaccttgttacccatgttggtcgccaacttctgg
gctcgagagatctacccacctattacaggctccatggatgtgaaacccatagatactcag
agccaactgtaccagaagcttttagagtacaagtggcttttagttatttggatgaattgt
atagccacacttgtggctgactgccgcagttactacttgagatggtcactacagcagtta
ctactgttactacttgagactgtcattacagcagttactactgttactgcttga