Result of FASTA (ccds) for pF1KE0630
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0630, 371 aa
  1>>>pF1KE0630 371 - 371 aa - 371 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.3236+/-0.000717; mu= 9.6551+/- 0.043
 mean_var=155.0021+/-31.120, 0's: 0 Z-trim(115.5): 26  B-trim: 3 in 1/52
 Lambda= 0.103016
 statistics sampled from 16004 (16025) to 16004 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.803), E-opt: 0.2 (0.492), width:  16
 Scan time:  2.740

The best scores are:                                      opt bits E(32554)
CCDS10455.1 NOXO1 gene_id:124056|Hs108|chr16       ( 371) 2548 389.7 2.1e-108
CCDS10454.1 NOXO1 gene_id:124056|Hs108|chr16       ( 370) 2530 387.1 1.4e-107
CCDS42101.1 NOXO1 gene_id:124056|Hs108|chr16       ( 376) 2528 386.8 1.7e-107
CCDS58406.1 NOXO1 gene_id:124056|Hs108|chr16       ( 375) 2510 384.1 1.1e-106


>>CCDS10455.1 NOXO1 gene_id:124056|Hs108|chr16            (371 aa)
 initn: 2548 init1: 2548 opt: 2548  Z-score: 2059.6  bits: 389.7 E(32554): 2.1e-108
Smith-Waterman score: 2548; 100.0% identity (100.0% similar) in 371 aa overlap (1-371:1-371)

               10        20        30        40        50        60
pF1KE0 MAGPRYPVSVQGAALVQIKRLQTFAFSVRWSDGSDTFVRRSWDEFRQLKKTLKETFPVEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MAGPRYPVSVQGAALVQIKRLQTFAFSVRWSDGSDTFVRRSWDEFRQLKKTLKETFPVEA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 GLLRRSDRVLPKLLDAPLLGRVGRTSRGLARLQLLETYSRRLLATAERVARSPTITGFFA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 GLLRRSDRVLPKLLDAPLLGRVGRTSRGLARLQLLETYSRRLLATAERVARSPTITGFFA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 PQPLDLEPALPPGSRVILPTPEEQPLSRAAGRLSIHSLEAQSLRCLQPFCTQDTRDRPFQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 PQPLDLEPALPPGSRVILPTPEEQPLSRAAGRLSIHSLEAQSLRCLQPFCTQDTRDRPFQ
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE0 AQAQESLDVLLRHPSGWWLVENEDRQTAWFPAPYLEEAAPGQGREGGPSLGSSGPQFCAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 AQAQESLDVLLRHPSGWWLVENEDRQTAWFPAPYLEEAAPGQGREGGPSLGSSGPQFCAS
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE0 RAYESSRADELSVPAGARVRVLETSDRGWWLCRYGDRAGLLPAVLLRPEGLGALLSGTGF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 RAYESSRADELSVPAGARVRVLETSDRGWWLCRYGDRAGLLPAVLLRPEGLGALLSGTGF
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE0 RGGDDPAGEARGFPEPSQATAPPPTVPTRPSPGAIQSRCCTVTRRALERRPRRQGRPRGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 RGGDDPAGEARGFPEPSQATAPPPTVPTRPSPGAIQSRCCTVTRRALERRPRRQGRPRGC
              310       320       330       340       350       360

              370 
pF1KE0 VDSVPHPTTEQ
       :::::::::::
CCDS10 VDSVPHPTTEQ
              370 

>>CCDS10454.1 NOXO1 gene_id:124056|Hs108|chr16            (370 aa)
 initn: 2215 init1: 2215 opt: 2530  Z-score: 2045.1  bits: 387.1 E(32554): 1.4e-107
Smith-Waterman score: 2530; 99.7% identity (99.7% similar) in 371 aa overlap (1-371:1-370)

               10        20        30        40        50        60
pF1KE0 MAGPRYPVSVQGAALVQIKRLQTFAFSVRWSDGSDTFVRRSWDEFRQLKKTLKETFPVEA
       ::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::
CCDS10 MAGPRYPVSVQGAALVQIKRLQTFAFSVRWSDGSDTFVRRSWDEFRQLK-TLKETFPVEA
               10        20        30        40         50         

               70        80        90       100       110       120
pF1KE0 GLLRRSDRVLPKLLDAPLLGRVGRTSRGLARLQLLETYSRRLLATAERVARSPTITGFFA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 GLLRRSDRVLPKLLDAPLLGRVGRTSRGLARLQLLETYSRRLLATAERVARSPTITGFFA
      60        70        80        90       100       110         

              130       140       150       160       170       180
pF1KE0 PQPLDLEPALPPGSRVILPTPEEQPLSRAAGRLSIHSLEAQSLRCLQPFCTQDTRDRPFQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 PQPLDLEPALPPGSRVILPTPEEQPLSRAAGRLSIHSLEAQSLRCLQPFCTQDTRDRPFQ
     120       130       140       150       160       170         

              190       200       210       220       230       240
pF1KE0 AQAQESLDVLLRHPSGWWLVENEDRQTAWFPAPYLEEAAPGQGREGGPSLGSSGPQFCAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 AQAQESLDVLLRHPSGWWLVENEDRQTAWFPAPYLEEAAPGQGREGGPSLGSSGPQFCAS
     180       190       200       210       220       230         

              250       260       270       280       290       300
pF1KE0 RAYESSRADELSVPAGARVRVLETSDRGWWLCRYGDRAGLLPAVLLRPEGLGALLSGTGF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 RAYESSRADELSVPAGARVRVLETSDRGWWLCRYGDRAGLLPAVLLRPEGLGALLSGTGF
     240       250       260       270       280       290         

              310       320       330       340       350       360
pF1KE0 RGGDDPAGEARGFPEPSQATAPPPTVPTRPSPGAIQSRCCTVTRRALERRPRRQGRPRGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 RGGDDPAGEARGFPEPSQATAPPPTVPTRPSPGAIQSRCCTVTRRALERRPRRQGRPRGC
     300       310       320       330       340       350         

              370 
pF1KE0 VDSVPHPTTEQ
       :::::::::::
CCDS10 VDSVPHPTTEQ
     360       370

>>CCDS42101.1 NOXO1 gene_id:124056|Hs108|chr16            (376 aa)
 initn: 2065 init1: 2065 opt: 2528  Z-score: 2043.4  bits: 386.8 E(32554): 1.7e-107
Smith-Waterman score: 2528; 98.7% identity (98.7% similar) in 376 aa overlap (1-371:1-376)

               10        20        30        40        50        60
pF1KE0 MAGPRYPVSVQGAALVQIKRLQTFAFSVRWSDGSDTFVRRSWDEFRQLKKTLKETFPVEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MAGPRYPVSVQGAALVQIKRLQTFAFSVRWSDGSDTFVRRSWDEFRQLKKTLKETFPVEA
               10        20        30        40        50        60

               70             80        90       100       110     
pF1KE0 GLLRRSDRVLPKLL-----DAPLLGRVGRTSRGLARLQLLETYSRRLLATAERVARSPTI
       ::::::::::::::     :::::::::::::::::::::::::::::::::::::::::
CCDS42 GLLRRSDRVLPKLLGQASLDAPLLGRVGRTSRGLARLQLLETYSRRLLATAERVARSPTI
               70        80        90       100       110       120

         120       130       140       150       160       170     
pF1KE0 TGFFAPQPLDLEPALPPGSRVILPTPEEQPLSRAAGRLSIHSLEAQSLRCLQPFCTQDTR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 TGFFAPQPLDLEPALPPGSRVILPTPEEQPLSRAAGRLSIHSLEAQSLRCLQPFCTQDTR
              130       140       150       160       170       180

         180       190       200       210       220       230     
pF1KE0 DRPFQAQAQESLDVLLRHPSGWWLVENEDRQTAWFPAPYLEEAAPGQGREGGPSLGSSGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 DRPFQAQAQESLDVLLRHPSGWWLVENEDRQTAWFPAPYLEEAAPGQGREGGPSLGSSGP
              190       200       210       220       230       240

         240       250       260       270       280       290     
pF1KE0 QFCASRAYESSRADELSVPAGARVRVLETSDRGWWLCRYGDRAGLLPAVLLRPEGLGALL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 QFCASRAYESSRADELSVPAGARVRVLETSDRGWWLCRYGDRAGLLPAVLLRPEGLGALL
              250       260       270       280       290       300

         300       310       320       330       340       350     
pF1KE0 SGTGFRGGDDPAGEARGFPEPSQATAPPPTVPTRPSPGAIQSRCCTVTRRALERRPRRQG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 SGTGFRGGDDPAGEARGFPEPSQATAPPPTVPTRPSPGAIQSRCCTVTRRALERRPRRQG
              310       320       330       340       350       360

         360       370 
pF1KE0 RPRGCVDSVPHPTTEQ
       ::::::::::::::::
CCDS42 RPRGCVDSVPHPTTEQ
              370      

>>CCDS58406.1 NOXO1 gene_id:124056|Hs108|chr16            (375 aa)
 initn: 2384 init1: 2065 opt: 2510  Z-score: 2029.0  bits: 384.1 E(32554): 1.1e-106
Smith-Waterman score: 2510; 98.4% identity (98.4% similar) in 376 aa overlap (1-371:1-375)

               10        20        30        40        50        60
pF1KE0 MAGPRYPVSVQGAALVQIKRLQTFAFSVRWSDGSDTFVRRSWDEFRQLKKTLKETFPVEA
       ::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::
CCDS58 MAGPRYPVSVQGAALVQIKRLQTFAFSVRWSDGSDTFVRRSWDEFRQLK-TLKETFPVEA
               10        20        30        40         50         

               70             80        90       100       110     
pF1KE0 GLLRRSDRVLPKLL-----DAPLLGRVGRTSRGLARLQLLETYSRRLLATAERVARSPTI
       ::::::::::::::     :::::::::::::::::::::::::::::::::::::::::
CCDS58 GLLRRSDRVLPKLLGQASLDAPLLGRVGRTSRGLARLQLLETYSRRLLATAERVARSPTI
      60        70        80        90       100       110         

         120       130       140       150       160       170     
pF1KE0 TGFFAPQPLDLEPALPPGSRVILPTPEEQPLSRAAGRLSIHSLEAQSLRCLQPFCTQDTR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 TGFFAPQPLDLEPALPPGSRVILPTPEEQPLSRAAGRLSIHSLEAQSLRCLQPFCTQDTR
     120       130       140       150       160       170         

         180       190       200       210       220       230     
pF1KE0 DRPFQAQAQESLDVLLRHPSGWWLVENEDRQTAWFPAPYLEEAAPGQGREGGPSLGSSGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 DRPFQAQAQESLDVLLRHPSGWWLVENEDRQTAWFPAPYLEEAAPGQGREGGPSLGSSGP
     180       190       200       210       220       230         

         240       250       260       270       280       290     
pF1KE0 QFCASRAYESSRADELSVPAGARVRVLETSDRGWWLCRYGDRAGLLPAVLLRPEGLGALL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 QFCASRAYESSRADELSVPAGARVRVLETSDRGWWLCRYGDRAGLLPAVLLRPEGLGALL
     240       250       260       270       280       290         

         300       310       320       330       340       350     
pF1KE0 SGTGFRGGDDPAGEARGFPEPSQATAPPPTVPTRPSPGAIQSRCCTVTRRALERRPRRQG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 SGTGFRGGDDPAGEARGFPEPSQATAPPPTVPTRPSPGAIQSRCCTVTRRALERRPRRQG
     300       310       320       330       340       350         

         360       370 
pF1KE0 RPRGCVDSVPHPTTEQ
       ::::::::::::::::
CCDS58 RPRGCVDSVPHPTTEQ
     360       370     




371 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Wed Nov  2 19:35:31 2016 done: Wed Nov  2 19:35:31 2016
 Total Scan time:  2.740 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]
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