Result of FASTA (omim) for pF1KE0613
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0613, 172 aa
  1>>>pF1KE0613 172 - 172 aa - 172 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.0740+/-0.000299; mu= 14.5947+/- 0.019
 mean_var=95.2140+/-22.570, 0's: 0 Z-trim(118.3): 608  B-trim: 2966 in 2/52
 Lambda= 0.131439
 statistics sampled from 30371 (31148) to 30371 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.751), E-opt: 0.2 (0.365), width:  16
 Scan time:  5.420

The best scores are:                                      opt bits E(85289)
NP_001191150 (OMIM: 616348) zinc finger protein 69 ( 172) 1154 228.2 4.9e-60
NP_065127 (OMIM: 616348) zinc finger protein 695 i ( 515)  874 175.7 9.9e-44
NP_942596 (OMIM: 600398) zinc finger protein 160 i ( 818)  287 64.6 4.3e-10
NP_001309065 (OMIM: 600398) zinc finger protein 16 ( 818)  287 64.6 4.3e-10
NP_001309064 (OMIM: 600398) zinc finger protein 16 ( 818)  287 64.6 4.3e-10
NP_150630 (OMIM: 600398) zinc finger protein 160 i ( 818)  287 64.6 4.3e-10
NP_001096073 (OMIM: 600398) zinc finger protein 16 ( 818)  287 64.6 4.3e-10
NP_001309058 (OMIM: 600398) zinc finger protein 16 ( 818)  287 64.6 4.3e-10
NP_001309063 (OMIM: 600398) zinc finger protein 16 ( 818)  287 64.6 4.3e-10
NP_001309062 (OMIM: 600398) zinc finger protein 16 ( 818)  287 64.6 4.3e-10
XP_016882935 (OMIM: 600398) PREDICTED: zinc finger ( 818)  287 64.6 4.3e-10
NP_001309059 (OMIM: 600398) zinc finger protein 16 ( 818)  287 64.6 4.3e-10
NP_001309057 (OMIM: 600398) zinc finger protein 16 ( 818)  287 64.6 4.3e-10
NP_001309060 (OMIM: 600398) zinc finger protein 16 ( 818)  287 64.6 4.3e-10
NP_001309061 (OMIM: 600398) zinc finger protein 16 ( 818)  287 64.6 4.3e-10
XP_016882934 (OMIM: 600398) PREDICTED: zinc finger ( 837)  287 64.6 4.4e-10
XP_016881888 (OMIM: 606427) PREDICTED: zinc finger ( 509)  266 60.4   5e-09
XP_016881885 (OMIM: 606427) PREDICTED: zinc finger ( 509)  266 60.4   5e-09
XP_016881889 (OMIM: 606427) PREDICTED: zinc finger ( 509)  266 60.4   5e-09
XP_016881882 (OMIM: 606427) PREDICTED: zinc finger ( 509)  266 60.4   5e-09
XP_016881886 (OMIM: 606427) PREDICTED: zinc finger ( 509)  266 60.4   5e-09
NP_997216 (OMIM: 606427) zinc finger protein 320 [ ( 509)  266 60.4   5e-09
XP_016881883 (OMIM: 606427) PREDICTED: zinc finger ( 509)  266 60.4   5e-09
XP_016881887 (OMIM: 606427) PREDICTED: zinc finger ( 509)  266 60.4   5e-09
XP_006723122 (OMIM: 606427) PREDICTED: zinc finger ( 509)  266 60.4   5e-09
XP_016881884 (OMIM: 606427) PREDICTED: zinc finger ( 509)  266 60.4   5e-09
NP_001008801 (OMIM: 616841) zinc finger protein 46 ( 522)  264 60.0 6.6e-09
XP_016882932 (OMIM: 616841) PREDICTED: zinc finger ( 541)  264 60.0 6.7e-09
NP_001264049 (OMIM: 616841) zinc finger protein 46 ( 127)  255 57.6 8.4e-09
NP_001309054 (OMIM: 600398) zinc finger protein 16 ( 147)  254 57.5 1.1e-08
XP_016882937 (OMIM: 600398) PREDICTED: zinc finger ( 147)  254 57.5 1.1e-08
NP_001309055 (OMIM: 600398) zinc finger protein 16 ( 147)  254 57.5 1.1e-08
XP_016882936 (OMIM: 600398) PREDICTED: zinc finger ( 166)  254 57.6 1.1e-08
NP_003432 (OMIM: 194648,615226) zinc finger protei ( 474)  256 58.4 1.8e-08
XP_016864080 (OMIM: 194648,615226) PREDICTED: zinc ( 534)  252 57.7 3.2e-08
XP_011511864 (OMIM: 194648,615226) PREDICTED: zinc ( 502)  244 56.2 8.9e-08
NP_001284553 (OMIM: 613910) zinc finger protein 48 ( 492)  243 56.0   1e-07
NP_115799 (OMIM: 615580) zinc finger protein 528 [ ( 628)  244 56.3   1e-07
NP_653285 (OMIM: 613910) zinc finger protein 480 i ( 535)  243 56.0 1.1e-07
XP_011524767 (OMIM: 613910) PREDICTED: zinc finger ( 535)  243 56.0 1.1e-07
XP_006723481 (OMIM: 615580) PREDICTED: zinc finger ( 712)  244 56.4 1.1e-07
XP_011525694 (OMIM: 615580) PREDICTED: zinc finger ( 712)  244 56.4 1.1e-07
NP_001287880 (OMIM: 603971) zinc finger protein 91 (1159)  245 56.8 1.4e-07
NP_003421 (OMIM: 603971) zinc finger protein 91 is (1191)  245 56.8 1.4e-07
XP_016881862 (OMIM: 603980) PREDICTED: zinc finger (  86)  231 52.9 1.5e-07
NP_001316903 (OMIM: 603977) zinc finger protein 20 ( 112)  232 53.2 1.6e-07
NP_001316900 (OMIM: 603977) zinc finger protein 20 ( 140)  232 53.3 1.8e-07
NP_001316902 (OMIM: 603977) zinc finger protein 20 ( 141)  232 53.3 1.8e-07
NP_001316901 (OMIM: 603977) zinc finger protein 20 ( 163)  232 53.4   2e-07
NP_001243101 (OMIM: 603899) zinc finger protein 85 (  87)  228 52.3 2.3e-07


>>NP_001191150 (OMIM: 616348) zinc finger protein 695 is  (172 aa)
 initn: 1154 init1: 1154 opt: 1154  Z-score: 1198.8  bits: 228.2 E(85289): 4.9e-60
Smith-Waterman score: 1154; 99.4% identity (100.0% similar) in 172 aa overlap (1-172:1-172)

               10        20        30        40        50        60
pF1KE0 MGLLAFRDVALEFSPEEWECLDPAQRSLYRDVMLENYRNLISLGEDSFNMQFLFHSLAMS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGLLAFRDVALEFSPEEWECLDPAQRSLYRDVMLENYRNLISLGEDSFNMQFLFHSLAMS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 KPELIICLEARKEPWNVNTEKTARHSVLSSYLTEDILPEQGLQVSFQKVMLRRYERCCLE
       :::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::
NP_001 KPELIICLEARKEPWNVNTEKTAKHSVLSSYLTEDILPEQGLQVSFQKVMLRRYERCCLE
               70        80        90       100       110       120

              130       140       150       160       170  
pF1KE0 KLRLRNDWEIPCEDVLASPLPSAMILSFLRPPQKQKHVKPTEPVQSSTIELL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KLRLRNDWEIPCEDVLASPLPSAMILSFLRPPQKQKHVKPTEPVQSSTIELL
              130       140       150       160       170  

>>NP_065127 (OMIM: 616348) zinc finger protein 695 isofo  (515 aa)
 initn: 874 init1: 874 opt: 874  Z-score: 906.1  bits: 175.7 E(85289): 9.9e-44
Smith-Waterman score: 874; 99.2% identity (100.0% similar) in 130 aa overlap (1-130:1-130)

               10        20        30        40        50        60
pF1KE0 MGLLAFRDVALEFSPEEWECLDPAQRSLYRDVMLENYRNLISLGEDSFNMQFLFHSLAMS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 MGLLAFRDVALEFSPEEWECLDPAQRSLYRDVMLENYRNLISLGEDSFNMQFLFHSLAMS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 KPELIICLEARKEPWNVNTEKTARHSVLSSYLTEDILPEQGLQVSFQKVMLRRYERCCLE
       :::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::
NP_065 KPELIICLEARKEPWNVNTEKTAKHSVLSSYLTEDILPEQGLQVSFQKVMLRRYERCCLE
               70        80        90       100       110       120

              130       140       150       160       170          
pF1KE0 KLRLRNDWEIPCEDVLASPLPSAMILSFLRPPQKQKHVKPTEPVQSSTIELL        
       ::::::::::                                                  
NP_065 KLRLRNDWEIVGEWKGQKASYNGLDLCSATTHSKNFQCNKCVKGFSKFANLNKCKISHTG
              130       140       150       160       170       180

>>NP_942596 (OMIM: 600398) zinc finger protein 160 isofo  (818 aa)
 initn: 283 init1: 246 opt: 287  Z-score: 302.1  bits: 64.6 E(85289): 4.3e-10
Smith-Waterman score: 287; 39.2% identity (68.0% similar) in 125 aa overlap (4-125:8-132)

                   10        20        30        40        50      
pF1KE0     MGLLAFRDVALEFSPEEWECLDPAQRSLYRDVMLENYRNLISLGEDSFNMQFLFHS
              :.:::::.::: :::.::::::: :::::::::: ::.:::   :.:...   
NP_942 MALTQVRLTFRDVAIEFSQEEWKCLDPAQRILYRDVMLENYWNLVSLGLCHFDMNIISML
               10        20        30        40        50        60

         60         70        80        90       100         110   
pF1KE0 LAMSKPELII-CLEARKEPWNVNTEKTARHSVLSSYLTEDILPEQ--GLQVSFQKVMLRR
          ..:  .  :..  ..: . .  : .  ..  .   .:.::..  . .. :. :.:.:
NP_942 EEGKEPWTVKSCVKIARKPRTPECVKGVVTDIPPKCTIKDLLPKEKSSTEAVFHTVVLER
               70        80        90       100       110       120

           120       130       140       150       160       170   
pF1KE0 YERCCLEKLRLRNDWEIPCEDVLASPLPSAMILSFLRPPQKQKHVKPTEPVQSSTIELL 
       .:   .: . ..                                                
NP_942 HESPDIEDFSFKEPQKNVHDFECQWRDDTGNYKGVLMAQKEGKRDQRDRRDIENKLMNNQ
              130       140       150       160       170       180

>>NP_001309065 (OMIM: 600398) zinc finger protein 160 is  (818 aa)
 initn: 283 init1: 246 opt: 287  Z-score: 302.1  bits: 64.6 E(85289): 4.3e-10
Smith-Waterman score: 287; 39.2% identity (68.0% similar) in 125 aa overlap (4-125:8-132)

                   10        20        30        40        50      
pF1KE0     MGLLAFRDVALEFSPEEWECLDPAQRSLYRDVMLENYRNLISLGEDSFNMQFLFHS
              :.:::::.::: :::.::::::: :::::::::: ::.:::   :.:...   
NP_001 MALTQVRLTFRDVAIEFSQEEWKCLDPAQRILYRDVMLENYWNLVSLGLCHFDMNIISML
               10        20        30        40        50        60

         60         70        80        90       100         110   
pF1KE0 LAMSKPELII-CLEARKEPWNVNTEKTARHSVLSSYLTEDILPEQ--GLQVSFQKVMLRR
          ..:  .  :..  ..: . .  : .  ..  .   .:.::..  . .. :. :.:.:
NP_001 EEGKEPWTVKSCVKIARKPRTPECVKGVVTDIPPKCTIKDLLPKEKSSTEAVFHTVVLER
               70        80        90       100       110       120

           120       130       140       150       160       170   
pF1KE0 YERCCLEKLRLRNDWEIPCEDVLASPLPSAMILSFLRPPQKQKHVKPTEPVQSSTIELL 
       .:   .: . ..                                                
NP_001 HESPDIEDFSFKEPQKNVHDFECQWRDDTGNYKGVLMAQKEGKRDQRDRRDIENKLMNNQ
              130       140       150       160       170       180

>>NP_001309064 (OMIM: 600398) zinc finger protein 160 is  (818 aa)
 initn: 283 init1: 246 opt: 287  Z-score: 302.1  bits: 64.6 E(85289): 4.3e-10
Smith-Waterman score: 287; 39.2% identity (68.0% similar) in 125 aa overlap (4-125:8-132)

                   10        20        30        40        50      
pF1KE0     MGLLAFRDVALEFSPEEWECLDPAQRSLYRDVMLENYRNLISLGEDSFNMQFLFHS
              :.:::::.::: :::.::::::: :::::::::: ::.:::   :.:...   
NP_001 MALTQVRLTFRDVAIEFSQEEWKCLDPAQRILYRDVMLENYWNLVSLGLCHFDMNIISML
               10        20        30        40        50        60

         60         70        80        90       100         110   
pF1KE0 LAMSKPELII-CLEARKEPWNVNTEKTARHSVLSSYLTEDILPEQ--GLQVSFQKVMLRR
          ..:  .  :..  ..: . .  : .  ..  .   .:.::..  . .. :. :.:.:
NP_001 EEGKEPWTVKSCVKIARKPRTPECVKGVVTDIPPKCTIKDLLPKEKSSTEAVFHTVVLER
               70        80        90       100       110       120

           120       130       140       150       160       170   
pF1KE0 YERCCLEKLRLRNDWEIPCEDVLASPLPSAMILSFLRPPQKQKHVKPTEPVQSSTIELL 
       .:   .: . ..                                                
NP_001 HESPDIEDFSFKEPQKNVHDFECQWRDDTGNYKGVLMAQKEGKRDQRDRRDIENKLMNNQ
              130       140       150       160       170       180

>>NP_150630 (OMIM: 600398) zinc finger protein 160 isofo  (818 aa)
 initn: 283 init1: 246 opt: 287  Z-score: 302.1  bits: 64.6 E(85289): 4.3e-10
Smith-Waterman score: 287; 39.2% identity (68.0% similar) in 125 aa overlap (4-125:8-132)

                   10        20        30        40        50      
pF1KE0     MGLLAFRDVALEFSPEEWECLDPAQRSLYRDVMLENYRNLISLGEDSFNMQFLFHS
              :.:::::.::: :::.::::::: :::::::::: ::.:::   :.:...   
NP_150 MALTQVRLTFRDVAIEFSQEEWKCLDPAQRILYRDVMLENYWNLVSLGLCHFDMNIISML
               10        20        30        40        50        60

         60         70        80        90       100         110   
pF1KE0 LAMSKPELII-CLEARKEPWNVNTEKTARHSVLSSYLTEDILPEQ--GLQVSFQKVMLRR
          ..:  .  :..  ..: . .  : .  ..  .   .:.::..  . .. :. :.:.:
NP_150 EEGKEPWTVKSCVKIARKPRTPECVKGVVTDIPPKCTIKDLLPKEKSSTEAVFHTVVLER
               70        80        90       100       110       120

           120       130       140       150       160       170   
pF1KE0 YERCCLEKLRLRNDWEIPCEDVLASPLPSAMILSFLRPPQKQKHVKPTEPVQSSTIELL 
       .:   .: . ..                                                
NP_150 HESPDIEDFSFKEPQKNVHDFECQWRDDTGNYKGVLMAQKEGKRDQRDRRDIENKLMNNQ
              130       140       150       160       170       180

>>NP_001096073 (OMIM: 600398) zinc finger protein 160 is  (818 aa)
 initn: 283 init1: 246 opt: 287  Z-score: 302.1  bits: 64.6 E(85289): 4.3e-10
Smith-Waterman score: 287; 39.2% identity (68.0% similar) in 125 aa overlap (4-125:8-132)

                   10        20        30        40        50      
pF1KE0     MGLLAFRDVALEFSPEEWECLDPAQRSLYRDVMLENYRNLISLGEDSFNMQFLFHS
              :.:::::.::: :::.::::::: :::::::::: ::.:::   :.:...   
NP_001 MALTQVRLTFRDVAIEFSQEEWKCLDPAQRILYRDVMLENYWNLVSLGLCHFDMNIISML
               10        20        30        40        50        60

         60         70        80        90       100         110   
pF1KE0 LAMSKPELII-CLEARKEPWNVNTEKTARHSVLSSYLTEDILPEQ--GLQVSFQKVMLRR
          ..:  .  :..  ..: . .  : .  ..  .   .:.::..  . .. :. :.:.:
NP_001 EEGKEPWTVKSCVKIARKPRTPECVKGVVTDIPPKCTIKDLLPKEKSSTEAVFHTVVLER
               70        80        90       100       110       120

           120       130       140       150       160       170   
pF1KE0 YERCCLEKLRLRNDWEIPCEDVLASPLPSAMILSFLRPPQKQKHVKPTEPVQSSTIELL 
       .:   .: . ..                                                
NP_001 HESPDIEDFSFKEPQKNVHDFECQWRDDTGNYKGVLMAQKEGKRDQRDRRDIENKLMNNQ
              130       140       150       160       170       180

>>NP_001309058 (OMIM: 600398) zinc finger protein 160 is  (818 aa)
 initn: 283 init1: 246 opt: 287  Z-score: 302.1  bits: 64.6 E(85289): 4.3e-10
Smith-Waterman score: 287; 39.2% identity (68.0% similar) in 125 aa overlap (4-125:8-132)

                   10        20        30        40        50      
pF1KE0     MGLLAFRDVALEFSPEEWECLDPAQRSLYRDVMLENYRNLISLGEDSFNMQFLFHS
              :.:::::.::: :::.::::::: :::::::::: ::.:::   :.:...   
NP_001 MALTQVRLTFRDVAIEFSQEEWKCLDPAQRILYRDVMLENYWNLVSLGLCHFDMNIISML
               10        20        30        40        50        60

         60         70        80        90       100         110   
pF1KE0 LAMSKPELII-CLEARKEPWNVNTEKTARHSVLSSYLTEDILPEQ--GLQVSFQKVMLRR
          ..:  .  :..  ..: . .  : .  ..  .   .:.::..  . .. :. :.:.:
NP_001 EEGKEPWTVKSCVKIARKPRTPECVKGVVTDIPPKCTIKDLLPKEKSSTEAVFHTVVLER
               70        80        90       100       110       120

           120       130       140       150       160       170   
pF1KE0 YERCCLEKLRLRNDWEIPCEDVLASPLPSAMILSFLRPPQKQKHVKPTEPVQSSTIELL 
       .:   .: . ..                                                
NP_001 HESPDIEDFSFKEPQKNVHDFECQWRDDTGNYKGVLMAQKEGKRDQRDRRDIENKLMNNQ
              130       140       150       160       170       180

>>NP_001309063 (OMIM: 600398) zinc finger protein 160 is  (818 aa)
 initn: 283 init1: 246 opt: 287  Z-score: 302.1  bits: 64.6 E(85289): 4.3e-10
Smith-Waterman score: 287; 39.2% identity (68.0% similar) in 125 aa overlap (4-125:8-132)

                   10        20        30        40        50      
pF1KE0     MGLLAFRDVALEFSPEEWECLDPAQRSLYRDVMLENYRNLISLGEDSFNMQFLFHS
              :.:::::.::: :::.::::::: :::::::::: ::.:::   :.:...   
NP_001 MALTQVRLTFRDVAIEFSQEEWKCLDPAQRILYRDVMLENYWNLVSLGLCHFDMNIISML
               10        20        30        40        50        60

         60         70        80        90       100         110   
pF1KE0 LAMSKPELII-CLEARKEPWNVNTEKTARHSVLSSYLTEDILPEQ--GLQVSFQKVMLRR
          ..:  .  :..  ..: . .  : .  ..  .   .:.::..  . .. :. :.:.:
NP_001 EEGKEPWTVKSCVKIARKPRTPECVKGVVTDIPPKCTIKDLLPKEKSSTEAVFHTVVLER
               70        80        90       100       110       120

           120       130       140       150       160       170   
pF1KE0 YERCCLEKLRLRNDWEIPCEDVLASPLPSAMILSFLRPPQKQKHVKPTEPVQSSTIELL 
       .:   .: . ..                                                
NP_001 HESPDIEDFSFKEPQKNVHDFECQWRDDTGNYKGVLMAQKEGKRDQRDRRDIENKLMNNQ
              130       140       150       160       170       180

>>NP_001309062 (OMIM: 600398) zinc finger protein 160 is  (818 aa)
 initn: 283 init1: 246 opt: 287  Z-score: 302.1  bits: 64.6 E(85289): 4.3e-10
Smith-Waterman score: 287; 39.2% identity (68.0% similar) in 125 aa overlap (4-125:8-132)

                   10        20        30        40        50      
pF1KE0     MGLLAFRDVALEFSPEEWECLDPAQRSLYRDVMLENYRNLISLGEDSFNMQFLFHS
              :.:::::.::: :::.::::::: :::::::::: ::.:::   :.:...   
NP_001 MALTQVRLTFRDVAIEFSQEEWKCLDPAQRILYRDVMLENYWNLVSLGLCHFDMNIISML
               10        20        30        40        50        60

         60         70        80        90       100         110   
pF1KE0 LAMSKPELII-CLEARKEPWNVNTEKTARHSVLSSYLTEDILPEQ--GLQVSFQKVMLRR
          ..:  .  :..  ..: . .  : .  ..  .   .:.::..  . .. :. :.:.:
NP_001 EEGKEPWTVKSCVKIARKPRTPECVKGVVTDIPPKCTIKDLLPKEKSSTEAVFHTVVLER
               70        80        90       100       110       120

           120       130       140       150       160       170   
pF1KE0 YERCCLEKLRLRNDWEIPCEDVLASPLPSAMILSFLRPPQKQKHVKPTEPVQSSTIELL 
       .:   .: . ..                                                
NP_001 HESPDIEDFSFKEPQKNVHDFECQWRDDTGNYKGVLMAQKEGKRDQRDRRDIENKLMNNQ
              130       140       150       160       170       180




172 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Wed Nov  2 20:24:30 2016 done: Wed Nov  2 20:24:31 2016
 Total Scan time:  5.420 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]
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