Result of FASTA (omim) for pF1KE0608
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0608, 359 aa
  1>>>pF1KE0608 359 - 359 aa - 359 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.7565+/-0.000349; mu= 9.1976+/- 0.022
 mean_var=110.9696+/-22.175, 0's: 0 Z-trim(117.0): 165  B-trim: 27 in 1/55
 Lambda= 0.121751
 statistics sampled from 28360 (28562) to 28360 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.708), E-opt: 0.2 (0.335), width:  16
 Scan time:  9.000

The best scores are:                                      opt bits E(85289)
NP_004279 (OMIM: 604448) cytohesin-interacting pro ( 359) 2358 425.0 1.3e-118
XP_016860875 (OMIM: 604448) PREDICTED: cytohesin-i ( 253) 1669 303.9 2.6e-82
NP_859062 (OMIM: 612027) general receptor for phos ( 395)  542 106.0 1.5e-22
XP_005268748 (OMIM: 612027) PREDICTED: general rec ( 265)  408 82.4 1.3e-15
XP_011536298 (OMIM: 612027) PREDICTED: general rec ( 265)  408 82.4 1.3e-15
NP_001258785 (OMIM: 612027) general receptor for p ( 252)  332 69.0 1.3e-11
NP_001188255 (OMIM: 603831) Na(+)/H(+) exchange re ( 408)  178 42.1  0.0027
XP_011507921 (OMIM: 603831) PREDICTED: Na(+)/H(+)  ( 409)  178 42.1  0.0027
XP_016856954 (OMIM: 603831) PREDICTED: Na(+)/H(+)  ( 409)  178 42.1  0.0027
XP_016856955 (OMIM: 603831) PREDICTED: Na(+)/H(+)  ( 409)  178 42.1  0.0027
XP_011507920 (OMIM: 603831) PREDICTED: Na(+)/H(+)  ( 508)  178 42.1  0.0032
XP_011507918 (OMIM: 603831) PREDICTED: Na(+)/H(+)  ( 512)  178 42.1  0.0032
XP_016856953 (OMIM: 603831) PREDICTED: Na(+)/H(+)  ( 519)  178 42.1  0.0033
NP_002605 (OMIM: 603831) Na(+)/H(+) exchange regul ( 519)  178 42.1  0.0033
NP_001188254 (OMIM: 603831) Na(+)/H(+) exchange re ( 519)  178 42.1  0.0033
NP_055831 (OMIM: 612258) microtubule-associated se (1309)  184 43.4  0.0034
XP_006722763 (OMIM: 612258) PREDICTED: microtubule (1314)  184 43.4  0.0034
XP_005259884 (OMIM: 612258) PREDICTED: microtubule (1315)  184 43.4  0.0034
XP_016881999 (OMIM: 612258) PREDICTED: microtubule (1403)  184 43.5  0.0036
XP_016882005 (OMIM: 612258) PREDICTED: microtubule (1409)  184 43.5  0.0036
XP_016881998 (OMIM: 612258) PREDICTED: microtubule (1410)  184 43.5  0.0036
XP_016882004 (OMIM: 612258) PREDICTED: microtubule (1243)  180 42.7  0.0052
XP_016882003 (OMIM: 612258) PREDICTED: microtubule (1243)  180 42.7  0.0052
XP_006722761 (OMIM: 612258) PREDICTED: microtubule (1243)  180 42.7  0.0052
XP_016882002 (OMIM: 612258) PREDICTED: microtubule (1317)  180 42.7  0.0055
XP_016882001 (OMIM: 612258) PREDICTED: microtubule (1318)  180 42.7  0.0055
XP_005259883 (OMIM: 612258) PREDICTED: microtubule (1323)  180 42.7  0.0055
XP_005259882 (OMIM: 612258) PREDICTED: microtubule (1324)  180 42.7  0.0055
XP_005259881 (OMIM: 612258) PREDICTED: microtubule (1325)  180 42.7  0.0055
XP_005259880 (OMIM: 612258) PREDICTED: microtubule (1331)  180 42.7  0.0055
XP_016882000 (OMIM: 612258) PREDICTED: microtubule (1347)  180 42.7  0.0056
XP_011526125 (OMIM: 612258) PREDICTED: microtubule (1355)  180 42.7  0.0056
XP_016881997 (OMIM: 612258) PREDICTED: microtubule (1411)  180 42.8  0.0058
XP_016881996 (OMIM: 612258) PREDICTED: microtubule (1412)  180 42.8  0.0058
XP_016881995 (OMIM: 612258) PREDICTED: microtubule (1418)  180 42.8  0.0058
XP_006722762 (OMIM: 612258) PREDICTED: microtubule (1419)  180 42.8  0.0058


>>NP_004279 (OMIM: 604448) cytohesin-interacting protein  (359 aa)
 initn: 2358 init1: 2358 opt: 2358  Z-score: 2250.5  bits: 425.0 E(85289): 1.3e-118
Smith-Waterman score: 2358; 100.0% identity (100.0% similar) in 359 aa overlap (1-359:1-359)

               10        20        30        40        50        60
pF1KE0 MSLQRLLQHSSNGNLADFCAGPAYSSYSTLTGSLTMDDNRRIQMLADTVATLPRGRKQLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MSLQRLLQHSSNGNLADFCAGPAYSSYSTLTGSLTMDDNRRIQMLADTVATLPRGRKQLA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 LTRSSSLSDFSWSQRKLVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 LTRSSSLSDFSWSQRKLVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 HCAGLQAGDVLANINGVSTEGFTYKQVVDLIRSSGNLLTIETLNGTMILKRTELEAKLQV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 HCAGLQAGDVLANINGVSTEGFTYKQVVDLIRSSGNLLTIETLNGTMILKRTELEAKLQV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE0 LKQTLKQKWVEYRSLQLQEHRLLHGDAANCPSLENMDLDELSLFGPLPGPGPALVDRNRL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 LKQTLKQKWVEYRSLQLQEHRLLHGDAANCPSLENMDLDELSLFGPLPGPGPALVDRNRL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE0 SSESSCKSWLSSMTMDSEDGYQTCVSEDSSRGAFSRQTSTDDECFIPKEGDDFLRRSSSR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 SSESSCKSWLSSMTMDSEDGYQTCVSEDSSRGAFSRQTSTDDECFIPKEGDDFLRRSSSR
              250       260       270       280       290       300

              310       320       330       340       350         
pF1KE0 RNRSISNTSSGSMSPLWEGNLSSMFGTLPRKSRKGSVRKQLLKFIPGLHRAVEEEESRF
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 RNRSISNTSSGSMSPLWEGNLSSMFGTLPRKSRKGSVRKQLLKFIPGLHRAVEEEESRF
              310       320       330       340       350         

>>XP_016860875 (OMIM: 604448) PREDICTED: cytohesin-inter  (253 aa)
 initn: 1669 init1: 1669 opt: 1669  Z-score: 1598.7  bits: 303.9 E(85289): 2.6e-82
Smith-Waterman score: 1669; 100.0% identity (100.0% similar) in 253 aa overlap (107-359:1-253)

         80        90       100       110       120       130      
pF1KE0 LVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAGLQAGDVLANING
                                     ::::::::::::::::::::::::::::::
XP_016                               MFTLICKIQEDSPAHCAGLQAGDVLANING
                                             10        20        30

        140       150       160       170       180       190      
pF1KE0 VSTEGFTYKQVVDLIRSSGNLLTIETLNGTMILKRTELEAKLQVLKQTLKQKWVEYRSLQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VSTEGFTYKQVVDLIRSSGNLLTIETLNGTMILKRTELEAKLQVLKQTLKQKWVEYRSLQ
               40        50        60        70        80        90

        200       210       220       230       240       250      
pF1KE0 LQEHRLLHGDAANCPSLENMDLDELSLFGPLPGPGPALVDRNRLSSESSCKSWLSSMTMD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LQEHRLLHGDAANCPSLENMDLDELSLFGPLPGPGPALVDRNRLSSESSCKSWLSSMTMD
              100       110       120       130       140       150

        260       270       280       290       300       310      
pF1KE0 SEDGYQTCVSEDSSRGAFSRQTSTDDECFIPKEGDDFLRRSSSRRNRSISNTSSGSMSPL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SEDGYQTCVSEDSSRGAFSRQTSTDDECFIPKEGDDFLRRSSSRRNRSISNTSSGSMSPL
              160       170       180       190       200       210

        320       330       340       350         
pF1KE0 WEGNLSSMFGTLPRKSRKGSVRKQLLKFIPGLHRAVEEEESRF
       :::::::::::::::::::::::::::::::::::::::::::
XP_016 WEGNLSSMFGTLPRKSRKGSVRKQLLKFIPGLHRAVEEEESRF
              220       230       240       250   

>>NP_859062 (OMIM: 612027) general receptor for phosphoi  (395 aa)
 initn: 667 init1: 349 opt: 542  Z-score: 526.0  bits: 106.0 E(85289): 1.5e-22
Smith-Waterman score: 643; 39.8% identity (68.3% similar) in 334 aa overlap (45-359:71-395)

           20        30        40        50        60        70    
pF1KE0 LADFCAGPAYSSYSTLTGSLTMDDNRRIQMLADTVATLPRGRKQLALTRSSSLSDFSWSQ
                                     :: . .:::: ::  .. : ..::.   .:
NP_859 PPAAAATPGPPADELYAALEDYHPAELYRALAVSGGTLPR-RKGSGF-RWKNLSQSPEQQ
               50        60        70        80          90        

           80        90       100       110       120       130    
pF1KE0 RKLVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAGLQAGDVLANI
       ::..:.::.::.:::::::.:  ....    :: :..:...:.:::. :::  ::..:..
NP_859 RKVLTLEKEDNQTFGFEIQTYGLHHREEQRVEMVTFVCRVHESSPAQLAGLTPGDTIASV
      100       110       120       130       140       150        

          140       150       160       170       180       190    
pF1KE0 NGVSTEGFTYKQVVDLIRSSGNLLTIETLNGTMILKRTELEAKLQVLKQTLKQKWVEYRS
       ::...::. ....::.:..:::.: .::: :: : ...::::.:: ::::: .:: ::::
NP_859 NGLNVEGIRHREIVDIIKASGNVLRLETLYGTSI-RKAELEARLQYLKQTLYEKWGEYRS
      160       170       180       190        200       210       

          200       210        220           230        240        
pF1KE0 LQLQEHRLLHGDAANCPSL-ENMDLDELSLFGP--LPG--P-GPALVDRNRLSSESSCKS
       :..::.::.:: ... ::. ....  .  :.:   :::  : :: :.  .:       ..
NP_859 LMVQEQRLVHGLVVKDPSIYDTLESVRSCLYGAGLLPGSLPFGPLLAVPGRP------RG
       220       230       240       250       260             270 

      250       260        270                280       290        
pF1KE0 WLSSMTMDSEDG-YQTCVSEDSSRGAF------SRQTS---TDDECFIPKEGDDF-LRRS
              :..:. :.::   ::   :.      .:  .   ..     :  :    : ::
NP_859 GARRARGDADDAVYHTCFFGDSEPPALPPPPPPARAFGPGPAETPAVGPGPGPRAALSRS
             280       290       300       310       320       330 

       300       310         320       330       340       350     
pF1KE0 SSRRNRSISNTSSGSM-SPLW-EGNLSSMFGTLPRKSRKGSVRKQLLKFIPGLHRAVEEE
       .: :  . .. ..:.  . :: :.  ... :   ::..  : :..::::::::.:..:::
NP_859 ASVRCAGPGGGGGGGAPGALWTEAREQALCGPGLRKTKYRSFRRRLLKFIPGLNRSLEEE
             340       350       360       370       380       390 

           
pF1KE0 ESRF
       ::..
NP_859 ESQL
           

>>XP_005268748 (OMIM: 612027) PREDICTED: general recepto  (265 aa)
 initn: 549 init1: 231 opt: 408  Z-score: 401.3  bits: 82.4 E(85289): 1.3e-15
Smith-Waterman score: 509; 38.6% identity (66.9% similar) in 272 aa overlap (107-359:1-265)

         80        90       100       110       120       130      
pF1KE0 LVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAGLQAGDVLANING
                                     : :..:...:.:::. :::  ::..:..::
XP_005                               MVTFVCRVHESSPAQLAGLTPGDTIASVNG
                                             10        20        30

        140       150       160       170       180       190      
pF1KE0 VSTEGFTYKQVVDLIRSSGNLLTIETLNGTMILKRTELEAKLQVLKQTLKQKWVEYRSLQ
       ...::. ....::.:..:::.: .::: :: : ...::::.:: ::::: .:: :::::.
XP_005 LNVEGIRHREIVDIIKASGNVLRLETLYGTSI-RKAELEARLQYLKQTLYEKWGEYRSLM
               40        50        60         70        80         

        200       210        220           230        240       250
pF1KE0 LQEHRLLHGDAANCPSL-ENMDLDELSLFGP--LPG--P-GPALVDRNRLSSESSCKSWL
       .::.::.:: ... ::. ....  .  :.:   :::  : :: :.  .:       ..  
XP_005 VQEQRLVHGLVVKDPSIYDTLESVRSCLYGAGLLPGSLPFGPLLAVPGRP------RGGA
      90       100       110       120       130             140   

              260        270                280       290          
pF1KE0 SSMTMDSEDG-YQTCVSEDSSRGAF------SRQTS---TDDECFIPKEGDDF-LRRSSS
            :..:. :.::   ::   :.      .:  .   ..     :  :    : ::.:
XP_005 RRARGDADDAVYHTCFFGDSEPPALPPPPPPARAFGPGPAETPAVGPGPGPRAALSRSAS
           150       160       170       180       190       200   

     300       310         320       330       340       350       
pF1KE0 RRNRSISNTSSGSM-SPLW-EGNLSSMFGTLPRKSRKGSVRKQLLKFIPGLHRAVEEEES
        :  . .. ..:.  . :: :.  ... :   ::..  : :..::::::::.:..:::::
XP_005 VRCAGPGGGGGGGAPGALWTEAREQALCGPGLRKTKYRSFRRRLLKFIPGLNRSLEEEES
           210       220       230       240       250       260   

         
pF1KE0 RF
       ..
XP_005 QL
         

>>XP_011536298 (OMIM: 612027) PREDICTED: general recepto  (265 aa)
 initn: 549 init1: 231 opt: 408  Z-score: 401.3  bits: 82.4 E(85289): 1.3e-15
Smith-Waterman score: 509; 38.6% identity (66.9% similar) in 272 aa overlap (107-359:1-265)

         80        90       100       110       120       130      
pF1KE0 LVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAGLQAGDVLANING
                                     : :..:...:.:::. :::  ::..:..::
XP_011                               MVTFVCRVHESSPAQLAGLTPGDTIASVNG
                                             10        20        30

        140       150       160       170       180       190      
pF1KE0 VSTEGFTYKQVVDLIRSSGNLLTIETLNGTMILKRTELEAKLQVLKQTLKQKWVEYRSLQ
       ...::. ....::.:..:::.: .::: :: : ...::::.:: ::::: .:: :::::.
XP_011 LNVEGIRHREIVDIIKASGNVLRLETLYGTSI-RKAELEARLQYLKQTLYEKWGEYRSLM
               40        50        60         70        80         

        200       210        220           230        240       250
pF1KE0 LQEHRLLHGDAANCPSL-ENMDLDELSLFGP--LPG--P-GPALVDRNRLSSESSCKSWL
       .::.::.:: ... ::. ....  .  :.:   :::  : :: :.  .:       ..  
XP_011 VQEQRLVHGLVVKDPSIYDTLESVRSCLYGAGLLPGSLPFGPLLAVPGRP------RGGA
      90       100       110       120       130             140   

              260        270                280       290          
pF1KE0 SSMTMDSEDG-YQTCVSEDSSRGAF------SRQTS---TDDECFIPKEGDDF-LRRSSS
            :..:. :.::   ::   :.      .:  .   ..     :  :    : ::.:
XP_011 RRARGDADDAVYHTCFFGDSEPPALPPPPPPARAFGPGPAETPAVGPGPGPRAALSRSAS
           150       160       170       180       190       200   

     300       310         320       330       340       350       
pF1KE0 RRNRSISNTSSGSM-SPLW-EGNLSSMFGTLPRKSRKGSVRKQLLKFIPGLHRAVEEEES
        :  . .. ..:.  . :: :.  ... :   ::..  : :..::::::::.:..:::::
XP_011 VRCAGPGGGGGGGAPGALWTEAREQALCGPGLRKTKYRSFRRRLLKFIPGLNRSLEEEES
           210       220       230       240       250       260   

         
pF1KE0 RF
       ..
XP_011 QL
         

>>NP_001258785 (OMIM: 612027) general receptor for phosp  (252 aa)
 initn: 473 init1: 167 opt: 332  Z-score: 329.5  bits: 69.0 E(85289): 1.3e-11
Smith-Waterman score: 433; 37.5% identity (66.0% similar) in 253 aa overlap (126-359:7-252)

         100       110       120       130       140       150     
pF1KE0 RPQNQNACSSEMFTLICKIQEDSPAHCAGLQAGDVLANINGVSTEGFTYKQVVDLIRSSG
                                     ..::..:..::...::. ....::.:..::
NP_001                         MTLLPSKGGDTIASVNGLNVEGIRHREIVDIIKASG
                                       10        20        30      

         160       170       180       190       200       210     
pF1KE0 NLLTIETLNGTMILKRTELEAKLQVLKQTLKQKWVEYRSLQLQEHRLLHGDAANCPSL-E
       :.: .::: :: : ...::::.:: ::::: .:: :::::..::.::.:: ... ::. .
NP_001 NVLRLETLYGTSI-RKAELEARLQYLKQTLYEKWGEYRSLMVQEQRLVHGLVVKDPSIYD
         40         50        60        70        80        90     

          220           230        240       250       260         
pF1KE0 NMDLDELSLFGP--LPG--P-GPALVDRNRLSSESSCKSWLSSMTMDSEDG-YQTCVSED
       ...  .  :.:   :::  : :: :.  .:       ..       :..:. :.::   :
NP_001 TLESVRSCLYGAGLLPGSLPFGPLLAVPGRP------RGGARRARGDADDAVYHTCFFGD
         100       110       120             130       140         

      270                280       290        300       310        
pF1KE0 SSRGAF------SRQTS---TDDECFIPKEGDDF-LRRSSSRRNRSISNTSSGSM-SPLW
       :   :.      .:  .   ..     :  :    : ::.: :  . .. ..:.  . ::
NP_001 SEPPALPPPPPPARAFGPGPAETPAVGPGPGPRAALSRSASVRCAGPGGGGGGGAPGALW
     150       160       170       180       190       200         

        320       330       340       350         
pF1KE0 -EGNLSSMFGTLPRKSRKGSVRKQLLKFIPGLHRAVEEEESRF
        :.  ... :   ::..  : :..::::::::.:..:::::..
NP_001 TEAREQALCGPGLRKTKYRSFRRRLLKFIPGLNRSLEEEESQL
     210       220       230       240       250  

>>NP_001188255 (OMIM: 603831) Na(+)/H(+) exchange regula  (408 aa)
 initn: 380 init1: 147 opt: 178  Z-score: 180.2  bits: 42.1 E(85289): 0.0027
Smith-Waterman score: 178; 32.7% identity (63.6% similar) in 107 aa overlap (82-188:14-112)

              60        70        80        90       100       110 
pF1KE0 LPRGRKQLALTRSSSLSDFSWSQRKLVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLI
                                     ::.....:: ..  .  . .        :.
NP_001                  MTSTFNPRECKLSKQEGQNYGFFLRIEKDTEGH--------LV
                                10        20        30             

             120       130       140       150       160       170 
pF1KE0 CKIQEDSPAHCAGLQAGDVLANINGVSTEGFTYKQVVDLIRSSGNLLTIETLNGTMILKR
         ... :::. :::: :: .  :::: ..   . :::::.:.::: .:. .:.:    : 
NP_001 RVVEKCSPAEKAGLQDGDRVLRINGVFVDKEEHMQVVDLVRKSGNSVTLLVLDGDSYEKA
          40        50        60        70        80        90     

             180       190       200       210       220       230 
pF1KE0 TELEAKLQVLKQTLKQKWVEYRSLQLQEHRLLHGDAANCPSLENMDLDELSLFGPLPGPG
       .. .. :. : :. :..                                           
NP_001 VKTRVDLKELGQSQKEQGLSDNILSPVMNGGVQTWTQPRLCYLVKEGGSYGFSLKTVQGQ
         100       110       120       130       140       150     

>>XP_011507921 (OMIM: 603831) PREDICTED: Na(+)/H(+) exch  (409 aa)
 initn: 193 init1: 170 opt: 178  Z-score: 180.2  bits: 42.1 E(85289): 0.0027
Smith-Waterman score: 178; 32.7% identity (63.6% similar) in 107 aa overlap (82-188:14-112)

              60        70        80        90       100       110 
pF1KE0 LPRGRKQLALTRSSSLSDFSWSQRKLVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLI
                                     ::.....:: ..  .  . .        :.
XP_011                  MTSTFNPRECKLSKQEGQNYGFFLRIEKDTEGH--------LV
                                10        20        30             

             120       130       140       150       160       170 
pF1KE0 CKIQEDSPAHCAGLQAGDVLANINGVSTEGFTYKQVVDLIRSSGNLLTIETLNGTMILKR
         ... :::. :::: :: .  :::: ..   . :::::.:.::: .:. .:.:    : 
XP_011 RVVEKCSPAEKAGLQDGDRVLRINGVFVDKEEHMQVVDLVRKSGNSVTLLVLDGDSYEKA
          40        50        60        70        80        90     

             180       190       200       210       220       230 
pF1KE0 TELEAKLQVLKQTLKQKWVEYRSLQLQEHRLLHGDAANCPSLENMDLDELSLFGPLPGPG
       .. .. :. : :. :..                                           
XP_011 VKTRVDLKELGQSQKEQGLSDNILSPVMNGGVQTWTQPRLCYLVKEGGSYGFSLKTVQGK
         100       110       120       130       140       150     

>>XP_016856954 (OMIM: 603831) PREDICTED: Na(+)/H(+) exch  (409 aa)
 initn: 193 init1: 170 opt: 178  Z-score: 180.2  bits: 42.1 E(85289): 0.0027
Smith-Waterman score: 178; 32.7% identity (63.6% similar) in 107 aa overlap (82-188:14-112)

              60        70        80        90       100       110 
pF1KE0 LPRGRKQLALTRSSSLSDFSWSQRKLVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLI
                                     ::.....:: ..  .  . .        :.
XP_016                  MTSTFNPRECKLSKQEGQNYGFFLRIEKDTEGH--------LV
                                10        20        30             

             120       130       140       150       160       170 
pF1KE0 CKIQEDSPAHCAGLQAGDVLANINGVSTEGFTYKQVVDLIRSSGNLLTIETLNGTMILKR
         ... :::. :::: :: .  :::: ..   . :::::.:.::: .:. .:.:    : 
XP_016 RVVEKCSPAEKAGLQDGDRVLRINGVFVDKEEHMQVVDLVRKSGNSVTLLVLDGDSYEKA
          40        50        60        70        80        90     

             180       190       200       210       220       230 
pF1KE0 TELEAKLQVLKQTLKQKWVEYRSLQLQEHRLLHGDAANCPSLENMDLDELSLFGPLPGPG
       .. .. :. : :. :..                                           
XP_016 VKTRVDLKELGQSQKEQGLSDNILSPVMNGGVQTWTQPRLCYLVKEGGSYGFSLKTVQGK
         100       110       120       130       140       150     

>>XP_016856955 (OMIM: 603831) PREDICTED: Na(+)/H(+) exch  (409 aa)
 initn: 193 init1: 170 opt: 178  Z-score: 180.2  bits: 42.1 E(85289): 0.0027
Smith-Waterman score: 178; 32.7% identity (63.6% similar) in 107 aa overlap (82-188:14-112)

              60        70        80        90       100       110 
pF1KE0 LPRGRKQLALTRSSSLSDFSWSQRKLVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLI
                                     ::.....:: ..  .  . .        :.
XP_016                  MTSTFNPRECKLSKQEGQNYGFFLRIEKDTEGH--------LV
                                10        20        30             

             120       130       140       150       160       170 
pF1KE0 CKIQEDSPAHCAGLQAGDVLANINGVSTEGFTYKQVVDLIRSSGNLLTIETLNGTMILKR
         ... :::. :::: :: .  :::: ..   . :::::.:.::: .:. .:.:    : 
XP_016 RVVEKCSPAEKAGLQDGDRVLRINGVFVDKEEHMQVVDLVRKSGNSVTLLVLDGDSYEKA
          40        50        60        70        80        90     

             180       190       200       210       220       230 
pF1KE0 TELEAKLQVLKQTLKQKWVEYRSLQLQEHRLLHGDAANCPSLENMDLDELSLFGPLPGPG
       .. .. :. : :. :..                                           
XP_016 VKTRVDLKELGQSQKEQGLSDNILSPVMNGGVQTWTQPRLCYLVKEGGSYGFSLKTVQGK
         100       110       120       130       140       150     




359 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Wed Nov  2 20:29:58 2016 done: Wed Nov  2 20:29:59 2016
 Total Scan time:  9.000 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]
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