GENSCAN 1.0	Date run:  2-Nov-116	Time: 21:18:43

Sequence gi568815597f:198132581_198419519 : 286939 bp : 36.24% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  24412  24516  105  0  0   59   59   148 0.988   7.49
 1.02 Term +  24937  25101  165  0  0   36   45   279 0.932  15.33
 1.03 PlyA +  25703  25708    6                               1.05

 2.05 PlyA -  26194  26189    6                               1.05
 2.04 Term -  26387  26316   72  2  0  118   41    36 0.266  -1.17
 2.03 Intr -  26707  26597  111  1  0  128   19    53 0.219   2.06
 2.02 Intr -  32255  32126  130  1  1   28   94    81 0.168   2.48
 2.01 Init -  33374  33205  170  2  2   48   34   194 0.269   9.05
 2.00 Prom -  49439  49400   40                              -1.45

 3.05 PlyA -  50102  50097    6                               1.05
 3.04 Term -  65448  65209  240  0  0   72   41   164 0.010   5.14
 3.03 Intr -  80252  79944  309  2  0  116   47    86 0.103   2.88
 3.02 Intr -  87786  87694   93  0  0   49   62    87 0.260   1.44
 3.01 Init -  96072  95872  201  0  0   60   86   111 0.505   7.02
 3.00 Prom -  99199  99160   40                              -4.65

 4.02 PlyA - 100313 100308    6                               1.05
 4.01 Sngl - 118234 117215 1020  1  0   58   48   352 0.803  24.99
 4.00 Prom - 118391 118352   40                              -9.85

 5.00 Prom + 120055 120094   40                              -9.45
 5.01 Init + 120478 120600  123  0  0   64  110    74 0.707   7.42
 5.02 Intr + 129995 130057   63  1  0   81   86    91 0.942   6.20
 5.03 Intr + 131545 131655  111  0  0   76  115   100 0.997  11.16
 5.04 Intr + 160365 160459   95  2  2   95   92    64 0.152   5.34
 5.05 Intr + 164525 164660  136  2  1   18  100    35 0.060  -2.65
 5.06 Term + 166291 166452  162  0  0   13   33   171 0.231   1.05
 5.07 PlyA + 166739 166744    6                               1.05

 6.02 PlyA - 166986 166981    6                               1.05
 6.01 Sngl - 180474 179071 1404  0  0   44   40   494 0.424  35.94
 6.00 Prom - 180567 180528   40                              -6.15

 7.07 PlyA - 180736 180731    6                               1.05
 7.06 Term - 182065 181218  848  2  2   18   48   727 0.002  53.75
 7.05 Intr - 196429 196277  153  2  0   18   62   133 0.260   2.82
 7.04 Intr - 198169 198029  141  2  0   29  100    83 0.148   3.00
 7.03 Intr - 205103 204906  198  0  0   10   33   153 0.161   0.40
 7.02 Intr - 208651 208526  126  2  0   55   74   128 0.492   7.83
 7.01 Init - 223060 222862  199  1  1   95  100    73 0.583   8.32
 7.00 Prom - 225994 225955   40                              -4.15

 8.09 PlyA - 226284 226279    6                               1.05
 8.08 Term - 247091 246917  175  1  1   77   42    80 0.016  -1.45
 8.07 Intr - 252610 252460  151  2  1   79   37    86 0.129   0.90
 8.06 Intr - 263960 263809  152  1  2    3  102    95 0.158   1.29
 8.05 Intr - 272216 272081  136  0  1   44   65    98 0.405   1.81
 8.04 Intr - 272671 272508  164  0  2   68   89   123 0.535   9.10
 8.03 Intr - 281643 281419  225  2  0   20   69   173 0.509   4.78
 8.02 Intr - 283958 283753  206  2  2   53   93   114 0.681   5.48
 8.01 Init - 285438 285364   75  0  0   76   58    63 0.377   3.24

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  15357  15423   67  2  1   89   80    63 0.866   6.89
S.002 Sngl - 181973 181218  756  2  0   88   48   688 0.997  60.69
S.003 Term + 186832 186942  111  0  0  124   41   148 0.982  11.28


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:198132581_198419519|GENSCAN_predicted_peptide_1|89_aa
MFTLLTAAAAGGGSGVAGGWAAARLALRTRLAVRRRPEAAKGAAVTKKLRGHGGGGNRSL
VSGPEELKRSPAFRRMLIGDVGYLSLADW

>gi568815597f:198132581_198419519|GENSCAN_predicted_CDS_1|270_bp
atgtttacactcctgacagcggcggcagcaggaggaggatcgggagtcgcgggaggatgg
gccgccgctaggctcgcactccggacgcgcctcgcagtgcgcaggaggcccgaggccgcc
aagggcgccgcggtaactaagaaactccgtggccacggcggcggcggcaacaggtctttg
gtttcgggacccgaggaacttaagcgaagtcccgccttccggcggatgctcattggcgac
gtcggttatttatctctcgcggattggtga

>gi568815597f:198132581_198419519|GENSCAN_predicted_peptide_2|160_aa
MQVEAAIAEVEATASYPEDLAKIIDKGGYTKQQISNMDKTAFYLKKMPSRTFIAREREIF
HERKSQLMWQALWLSTFKKTTQPPAFSDRHRNHLAAINIEAGPQPGAPSADIPRKRTNAA
FSEPRAGVGSTRPPEREAFLSPHTVTAPLTPPRGKAFSKL

>gi568815597f:198132581_198419519|GENSCAN_predicted_CDS_2|483_bp
atgcaagttgaagcagcaattgctgaagtagaagctacagcaagttatccagaagatcta
gctaagatcattgataaaggtggctacactaaacaacagatttccaatatggataaaaca
gccttctatttgaaaaagatgccatctaggacttttatagctagagagagagaaattttt
catgaaagaaagagtcaattgatgtggcaagctttatggttgtctacttttaagaaaacg
acacagccaccagccttcagtgaccgtcaccgtaatcatttagcagccatcaacattgag
gctggccctcagcctggcgccccttccgcagacatccctagaaaaagaactaacgcggcc
ttctccgagcccagggctggagtaggaagtacccgccctcccgaacgcgaggccttcctc
tcaccccatacagttactgcccctttgactcctccgagaggcaaagctttttcaaagctc
taa

>gi568815597f:198132581_198419519|GENSCAN_predicted_peptide_3|280_aa
MSELPFTIASKRIKYLGIQLTRDVKDLFKENYKPLFNEIKEDTKKWKNIPCSWVGRINIV
KMAILPKELGLFGEMIGSRTQAEKEQAESETFCCAKDKMLKWTVLVGLQPGGGTCKRGSA
VVVTADFLLALCWGGTLVFQAMGWAMELPNVPVHCVTLQGQIEEQNQVWAGSGKSMLWLP
TCRHKQWPQWGSEGSSLAAGGVGPLILCHSQGIQDANPRVPTLLHTHHLPLDASCESLGS
WHVRTRSDRGQEDADENEESSQKDAQAPRAWQAFLLLFHQ

>gi568815597f:198132581_198419519|GENSCAN_predicted_CDS_3|843_bp
atgagtgaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaactt
acaagggacgtgaaggacctcttcaaggagaactacaaaccactgttcaatgaaataaaa
gaggatacaaagaaatggaagaacattccatgctcatgggtaggaagaatcaatatcgtg
aaaatggccatactgcccaaggaattagggctttttggagagatgattggttctaggact
caggctgagaaagaacaagctgagtctgaaacattttgttgtgccaaagacaagatgttg
aaatggactgtgctggttggcctccagccgggaggtggcacttgcaaaagaggatcagcc
gtagtggtgacagcagattttctgcttgccttatgttggggtggtactctggtatttcag
gcaatgggctgggccatggagctcccaaatgtccctgtccattgtgttaccctacaaggg
cagatagaggagcaaaaccaggtgtgggctgggtcaggcaagtccatgctctggctcccc
acgtgcaggcacaagcagtggccccagtggggatcagagggcagttccctggctgctggc
ggggtgggccccctcatcctgtgccacagccagggtatccaggatgccaatcctcgggtc
cctaccctcctccatacccaccacctgcccctggatgcctcctgtgaatcccttggctcc
tggcatgttcggactaggagtgatagaggacaagaagatgcagatgaaaatgaagaaagc
tcacaaaaagatgcacaagcaccacgagcatggcaagcattcctcctcctcttccatcag
tga

>gi568815597f:198132581_198419519|GENSCAN_predicted_peptide_4|339_aa
MIVYLENPIVSAQNLLKLISNFSKVSGYKINVQKSQAFLYTNNRQTESQIMSELPFTIAS
KRIKYLGIQLTRDVKDLFKENYKPLLKEIKEDTNKWKNIPCSWVGRINIVKMAILPKVIY
RFNAVPIKLPMTFFTELEKTALKFIWNQKRARIAKSILSQKNKAGGITLPDFKLYYKATV
TKTAWYWYQNRDIDQWNRTEPSEIMPHIYNYLIFDKPEKNKQWGKHSLFNKRCWENWLAI
CRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKSLEENLGVTIQDIGMGKDFMSKTPKAMA
TKAKIDKWDLIKLKSTAKETTISEQATYKMGENFRNPLI

>gi568815597f:198132581_198419519|GENSCAN_predicted_CDS_4|1020_bp
atgattgtatatctagaaaaccccattgtctcagcccaaaatctccttaagctgataagc
aacttcagcaaagtctcaggatacaaaatcaatgtacaaaaatcacaagcattcttatac
accaataacagacaaacagagagccaaatcatgagtgaactcccattcacaattgcttca
aagagaataaaatacctaggaatccaacttacaagggatgtgaaggacctcttcaaggag
aactacaaaccactgctcaaggaaataaaagaggatacaaacaaatggaagaacattcca
tgctcatgggtaggaagaatcaatatcgtgaaaatggccatactgcccaaggtaatttat
agattcaatgccgttcccatcaagctaccaatgactttcttcacagaattggaaaaaact
gctttaaagttcatatggaaccaaaaaagagcccgcatcgccaagtcaattctaagccaa
aagaacaaagctggaggcatcacactacctgacttcaaactatactacaaggctacagta
accaaaacagcatggtactggtaccaaaacagagatatagaccaatggaacagaacagag
ccctcagaaataatgccacatatctacaactatctgatctttgacaaacctgagaaaaac
aagcaatggggaaagcattccctatttaataaacggtgctgggaaaactggctagccata
tgtagaaagctgaaactggatcccttccttacaccttatacaaaaatcaattcaagatgg
attaaagacttaaacgttagacctaaaaccataaaaagcctagaagaaaacctaggcgtt
accattcaggacataggcatgggcaaggacttcatgtctaaaacaccaaaagcaatggca
acaaaagccaaaattgacaaatgggatctaattaaactaaagagcacagcaaaagaaact
accatcagtgaacaggcaacctacaaaatgggagaaaattttcgcaacccactcatctga

>gi568815597f:198132581_198419519|GENSCAN_predicted_peptide_5|229_aa
MGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDL
LKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKLVRLITCLQREYMKMDTTSNL
TSGLLAVYYMSFIGGILQMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEEDFND
DTTSGSLKSACLQGYFTAAKCEVGYADSQPRGKYQSLAQIEGLRVGKGK

>gi568815597f:198132581_198419519|GENSCAN_predicted_CDS_5|690_bp
atgggctataatacattagccaactttcgaatagaaaagaaaattggtcgcggacaattt
agtgaagtttatagagcagcctgtctcttggatggagtaccagtagctttaaaaaaagtg
cagatatttgatttaatggatgccaaagcacgtgctgattgcatcaaagaaatagatctt
cttaagcaactcaaccatccaaatgtaataaaatattatgcatcattcattgaagataat
gaactaaacatagttttggaactagcagatgctggcgacctatccagaatgatcaagttg
gtacgccttattacatgtctccagagagaatacatgaaaatggatacaacttcaaatctg
acatctggtctcttggctgtctactatatgagtttcattgggggcattttacagatggct
gcattacaaagtcctttctatggtgacaaaatgaatttatactcactgtgtaagaagata
gaacagtgtgactacccacctcttccttcagatcactattcagaagaagattttaatgat
gataccactagtggttcgttgaagtcggcctgcctgcagggctacttcactgcagctaag
tgtgaagttggatatgcggattctcagccaaggggcaaatatcaaagtctggcccagata
gaaggtcttagagttgggaaaggaaaatag

>gi568815597f:198132581_198419519|GENSCAN_predicted_peptide_6|467_aa
MGDFNTPLSTLDRSTRQKVNKDTQELNSALHQADLIDIYRTLQPKSTENTFFSAPRHTYS
KIDHILGSKALLSKCKRTEIITNYLSDHSAIKLELRIKNLTQNRSTTWKLNNLLLNDYWV
HNEMKAEIKMFFETNENKDTTYKNLWDSFKAVCRGQFIALNAHKRNQERSKTDTLTSQLK
ELEKQEQTHSKASTRQEITKIRAELKEIETQKTLQKINESRSWFFERINKIDRLLARLIK
KKREKNQIDAIKNDKGDITTDPTEIQTTIREYYKHLYANKLENLEEMDKFLDTYTLPRLN
QEEVESLNKPITGAEIVAIINSLPTKKSPGPDGFTAEFYQRYKEEQVPFLLKLFQSIEKE
RILPNSFYEASIILIPKPGRDTTKKGNFRPISLMNIDAKILNKILANRIQQHIKKLIHHD
QVGFIPGMQGWFNIHKSINVIQHINRTKQKNHMIISIDAEKAFDKIQ

>gi568815597f:198132581_198419519|GENSCAN_predicted_CDS_6|1404_bp
atgggagactttaacaccccactgtcaacattagacagatcaacgagacagaaagtcaac
aaggatacccaggaattgaactcagctctacaccaagcggacctaatagacatctacaga
actctccaacccaaatcaacagaaaatacatttttttcagcaccacgccacacctattcc
aaaattgaccacatacttggaagtaaagctctcctcagcaaatgtaaaagaacagaaatt
ataacaaactatctctcagaccacagtgcaatcaaactagaactcaggattaagaatctc
actcaaaatcgctcaactacatggaaactgaacaacctgctcctgaatgactactgggta
cataacgaaatgaaggcagaaataaagatgttctttgaaaccaacgagaacaaagacaca
acatacaagaatctctgggactcatttaaagcagtgtgtagagggcaatttatagcacta
aatgcccacaagagaaaccaggaaagatccaaaactgacaccctaacatcacaattaaaa
gaactagaaaagcaagagcaaacacattcaaaagctagcacaaggcaagaaataactaaa
atcagagcagaactgaaggaaatagagacgcaaaaaacccttcaaaaaattaatgaatcc
aggagctggttttttgaaaggatcaacaaaattgatagactgctagcaagactaataaag
aaaaaaagagagaagaatcaaatagatgcaataaaaaatgataaaggggatatcaccacc
gatcccacagaaatacaaactaccatcagagaatactacaaacacctctacgcaaataaa
ctagaaaatctagaagaaatggataaattccttgacacatacactctcccaagactaaac
caggaagaagttgaatctctgaataaaccaataacaggagctgaaattgtggcaataatc
aatagcttaccaaccaaaaagagtccaggaccagatggatttacagccgaattctaccag
aggtacaaggaggaacaggtaccattccttctgaaactattccaatcaatagaaaaagag
agaatcctccctaactcattttatgaggccagcatcatcctgataccaaagccgggcaga
gacacaaccaaaaaagggaattttagaccaatatccttgatgaacattgatgcaaaaatc
ctcaataaaatactggcaaaccgaatccagcagcacatcaaaaagcttatccaccatgat
caagtgggcttcatccctgggatgcaaggctggttcaacatacacaaatcaatcaatgta
atccagcatataaacagaaccaaacagaaaaaccacatgattatctcaatagatgcagaa
aaggcctttgacaaaattcaataa

>gi568815597f:198132581_198419519|GENSCAN_predicted_peptide_7|554_aa
MAEGKAEAATFFTRQQRECQTVIKPSDLMRTHSLSREQHGGNHPHDSIASTWFLPQHLKI
MGITIQGFQEFFPPRPSSTPPPPSRVSAVYRSSLGMAAAQQTQELGAHVHSCTAIKNYLR
LGIYKEKRFNWLLVPQAVPEACWGGLRKLAIMAEGKEERGTAYMGGAGKESEGGESDQVN
KVRDAGGKVVGDIILDSIVWEVLFKREPLNISGRKELAKRKDRAGAVCRTTAPEDIGDEE
AAAPAGHPGLRQRRWWKSASLRQGGCPSQAAVEGKLTNRNDIHTKNPPVHHHHQRPKVDK
TTKMGKKQSRKTGNSKKQSASPPPKECSSSPATEQSWTDNDFDKLREEDFRRSNYSELRE
DIQTKGKEVENFEKNLEECITRITITEKCLKELMELKTKARELREECRSLRSQCNQLEER
VSAMEDEMNEMKREGKFREKRIKRNEQSLQEIWDYVKGPNLRLIGVPESDGENGTKLENT
LQDIIRENFPNLARQVNIQIQEIQRMPQRYSSRRATPRHIIVTKVEMKEKMLGAAREKGR
VTLKGKPIRLTADL

>gi568815597f:198132581_198419519|GENSCAN_predicted_CDS_7|1665_bp
atggcggaaggcaaagcagaagcagctaccttcttcacaaggcagcagcgggaatgccag
acggttataaaaccatcagatctcatgagaactcactcactatcacgagaacagcacgga
ggaaaccacccccatgattcaattgcctccacctggttcctccctcaacacctgaaaatt
atggggattacaattcaagggtttcaagagttctttcctcctcgtccttcctcaacacct
ccaccaccatcaagggtgtcagcggtttacagaagtagtctgggaatggcagctgcccag
caaactcaagaacttggggctcatgtccattcttgcactgctataaagaactacctgaga
ctgggtatttataaagaaaagaggtttaattggctcctggttccacaggctgtaccagaa
gcatgctggggcggtctcaggaaacttgcaatcatggcagaaggcaaagaggaaagaggc
acagcttacatgggtggagcaggaaaagagagtgaagggggagagagtgaccaagtcaac
aaggtcagggatgctggaggaaaggtggttggtgacatcatattagatagcatagtctgg
gaagtcctcttcaagagggagcctttgaacatcagtggtaggaaggaattggctaagaga
aaagatagggctggagctgtctgcaggactacggctccagaggacattggagatgaggag
gcagctgcgcctgcagggcatccagggctgagacagaggaggtggtggaagtctgcaagt
ctgcgccaaggaggttgtccgagccaagcagcagtcgaaggaaaactaacaaacagaaac
gacatccacaccaaaaacccacctgtacatcaccatcatcaaagaccaaaagtagataaa
accacaaagatggggaaaaaacagagcagaaaaactggaaactctaaaaagcagagcgcc
tctcctcctccaaaggaatgcagttcctcaccagcaacggaacaaagctggactgacaat
gactttgacaagctgagagaagaagacttcagacgatcaaattactccgagctacgggag
gacattcaaaccaaaggcaaagaagttgaaaactttgaaaaaaatttagaagaatgtata
actagaataaccattacagagaagtgcttaaaggagctgatggagctgaaaaccaaggct
cgagaactacgtgaagaatgcagaagcctcaggagccaatgcaatcaactggaagaaagg
gtatcagcgatggaagatgaaatgaatgaaatgaagcgagaagggaagtttagagaaaaa
agaataaaaagaaacgagcaaagcctccaagaaatatgggactatgtgaaaggaccaaat
ctacgtctgattggtgtacctgaaagtgacggggagaatggaaccaagttggaaaacact
ctgcaggatattatccgggagaacttccccaatctagcaaggcaggtcaacattcagatt
caggaaatacaaagaatgccacaaagatactcctcgagaagagcaactccaagacacata
attgtcaccaaagttgaaatgaaggaaaaaatgttaggggcagccagagagaaaggtcga
gttaccctcaaagggaagcccatcagactaacagcggatctctag

>gi568815597f:198132581_198419519|GENSCAN_predicted_peptide_8|427_aa
MMFRQPTALEQDAELDIPIGTISRQLCMGKDLPNYISHILLPADSLLGSANRTALAGDEE
AGLEIRTLLLIQIVVALADSCWRCSSGTEGRMKRIQLLDCEDLSIAHGKVHLVIRNIDIQ
ATASEELTFAPADDFSPGQHLDCYLMRDSGPEPPSKAAPGFLTLRNTVNGFVVSLTSGVK
LQMQTLAVSVTAHKGGMSRVVCSSQWVHGLTDFRNEAADADPRARHRALIGAFLQSADWC
VYNPLARQKSSPSSHWTQEVQLASPLTVRISSAISDELGMLDRNKQDKERKHSKPKMLCD
EAGPCSPHCAQGTFQPFIKGPLATFHVVHYTDEAENLPVYLSVMSTTEAWLPLRNGGNSK
AIGCSLYLSRHSGLADHSIYHTVLQMPVHFSICTPSRNYVYLLHFISSVLATVSGPLQAL
SKYLSNE

>gi568815597f:198132581_198419519|GENSCAN_predicted_CDS_8|1284_bp
atgatgttcagacaacctacggcactagagcaggatgcggaacttgacatacctatagga
actatctccagacaactttgtatgggcaaggatttgccaaattacatttcccacattctt
ttgccagctgactctctgttaggttctgccaataggacagcactggcgggagatgaggag
gctggactggagataagaaccctgcttctgattcagatagttgttgcacttgctgacagt
tgctggaggtgctctagtggcactgagggtaggatgaaaagaatccaactgctagattgt
gaggatctttcaattgcccatggaaaggtgcaccttgtgataaggaacatagacatccag
gcaacagccagtgaggaactaacgtttgctcctgcagatgatttcagccctggccaacac
cttgactgctaccttatgagagactctggaccagaaccacccagtaaagcagcacctgga
ttcctgactctcagaaacactgttaatgggttcgtggtctcgctgacttcaggagtgaag
ctgcagatgcagactctggcagtgagtgttacagctcataaaggtggcatgtccagagtt
gtttgttcctcccagtgggttcatggtctcactgacttcaggaatgaagctgcagacgca
gaccctcgtgctagacacagagcgttgattggtgcatttttacagagtgctgattggtgc
gtttacaatcctttagctagacagaaaagttctccaagctcccactggacccaggaagtc
cagctggcttcacctctcacagttagaatatcttctgccatcagtgatgagcttggaatg
ttggatcgtaataaacaagacaaggagaggaaacacagcaaaccaaagatgctttgtgat
gaggcagggccatgcagcccacactgtgctcagggcacttttcagccatttatcaaagga
cccctggccacgtttcatgtggttcactacactgatgaagctgaaaatttgccagtctac
ctttcagtgatgagcaccacagaagcgtggttacctctcagaaatggaggcaacagcaag
gccattggatgcagtctttatttgtccaggcattcaggccttgctgatcatagcatttat
cacacagtattacaaatgcctgttcacttctctatttgcaccccaagcaggaactatgtc
taccttcttcactttatatcctcagtgcttgccacagtgtctggcccattgcaggcactc
agtaaatacctgtcaaatgaatga