GENSCAN 1.0	Date run:  2-Nov-116	Time: 22:11:18

Sequence gi568815591r:99828853_100029620 : 200768 bp : 44.18% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   9676   9725   50  0  2   68  100    18 0.468   1.42
 1.02 Intr +  15291  15390  100  0  1   83   66   119 0.719   9.31
 1.03 Intr +  27981  28047   67  2  1   98   86    19 0.769   1.18
 1.04 Intr +  30978  31138  161  1  2   96  116   172 0.999  20.51
 1.05 Intr +  32761  32987  227  0  2  100   82   161 0.792  13.48
 1.06 Intr +  34685  34847  163  2  1   13   82   104 0.606   2.28
 1.07 Term +  35683  35700   18  0  0   84   33    28 0.199  -4.78
 1.08 PlyA +  36262  36267    6                               1.05

 2.02 PlyA -  36991  36986    6                               1.05
 2.01 Sngl -  48181  47210  972  1  0   68   40   642 0.942  54.15
 2.00 Prom -  61188  61149   40                              -2.76

 3.00 Prom +  67670  67709   40                              -5.96
 3.01 Init +  68252  68498  247  1  1   68  100   167 0.850  13.66
 3.02 Term +  70598  70695   98  0  2   76   40    50 0.560  -2.87
 3.03 PlyA +  71639  71644    6                               1.05

 4.11 PlyA -  71668  71663    6                               1.05
 4.10 Term -  72198  71909  290  1  2   13   39   104 0.064  -6.46
 4.09 Intr -  74463  74366   98  2  2   58  105    66 0.216   4.95
 4.08 Intr -  74746  74724   23  1  2  113   85    14 0.451  -0.06
 4.07 Intr -  79960  79730  231  1  0   17   94   264 0.838  17.87
 4.06 Intr -  80808  80713   96  0  0   84   90    81 0.873   8.11
 4.05 Intr -  87927  87850   78  0  0   85   75    43 0.719   2.45
 4.04 Intr -  90558  90157  402  0  0   90   88   655 0.603  60.32
 4.03 Intr - 100769 100475  295  1  1   98   10   335 0.181  23.71
 4.02 Intr - 117644 117512  133  0  1   59   69    82 0.006   3.10
 4.01 Init - 127475 127427   49  2  1   86   58    18 0.006  -2.29
 4.00 Prom - 130428 130389   40                              -7.36

 5.05 PlyA - 137906 137901    6                               1.05
 5.04 Term - 138434 138151  284  0  2   99   49   298 0.989  22.59
 5.03 Intr - 139578 139303  276  1  0  -11   73   272 0.162  13.29
 5.02 Intr - 143154 142894  261  1  0  126   73   246 0.990  24.36
 5.01 Init - 147168 147093   76  0  1   72  101   160 0.936  14.95
 5.00 Prom - 148333 148294   40                              -5.56

 6.00 Prom + 149729 149768   40                              -5.26
 6.01 Init + 151921 151996   76  0  1   72  101   158 0.735  14.75
 6.02 Intr + 154292 154552  261  0  0  116   73   291 0.925  27.86
 6.03 Intr + 158406 158685  280  1  1  104   91   296 0.990  28.04
 6.04 Intr + 163544 163841  298  2  1   78   10   289 0.139  16.98
 6.05 Intr + 168727 168934  208  0  1    7   75   156 0.556   4.85
 6.06 Term + 172203 172342  140  1  2   66   41   138 0.945   5.03
 6.07 PlyA + 172758 172763    6                               1.05

 7.00 Prom + 194600 194639   40                              -6.26
 7.01 Init + 194658 195080  423  2  0   61   98   457 0.594  40.35
 7.02 Intr + 195302 195455  154  1  1   87   94    54 0.289   5.55

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 184663 184728   66  0  0   84   39   117 0.920   4.34


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591r:99828853_100029620|GENSCAN_predicted_peptide_1|261_aa
MKTHQKDNELLSVHRQKLYEGQQPMLVIMDPDMIKTVLVKECYSVFTNQMHRVDFFQQMI
DSQNSKETKSHKALSDLELVAQSIIIIFAAYDTTSTTLPFIMYELATHPDVQQKLQEEID
AVLPNKAPVTYDALVQMEYLDMVVNETLRLFPVVSRVTRVCKKDIEINGVFIPKGLAVMV
PIYALHHDPKYWTEPEKFCPERFSKKNKDSIDLYRYIPFGAGPRNCIGMRFALTNIKLAV
IRALQNFSFKPCKETQAVIIT

>gi568815591r:99828853_100029620|GENSCAN_predicted_CDS_1|786_bp
atgaaaacacatcagaaagacaatgagttgcttagtgttcatagacagaagctgtatgag
gggcaacagcccatgctggtcatcatggatcccgacatgatcaaaacagtgttagtgaaa
gaatgttactctgtcttcacaaaccagatgcatcgagtagatttctttcaacagatgatc
gactcccagaattccaaagaaacaaagtcccataaagctctgtctgatctggagcttgtg
gcccagtcaattatcatcatttttgctgcctatgacacaactagcaccactctccccttc
attatgtatgaactggccactcaccctgatgtccagcagaaactgcaggaggagattgac
gcagttttacccaataaggcacctgtcacctacgatgccctggtacagatggagtacctt
gacatggtggtgaatgaaacgctcagattattcccagttgttagtagagttacgagagtc
tgcaagaaagatattgaaatcaatggagtgttcattcccaaagggttagcagtgatggtt
ccaatctatgctcttcaccatgacccaaagtactggacagagcctgagaagttctgccct
gaaaggttcagtaagaagaacaaggacagcatagatctttacagatacataccttttgga
gctggaccccgaaactgcattggcatgaggtttgctctcacaaacataaaacttgctgtc
attagagcactgcagaacttctccttcaaaccttgtaaagagactcaggctgttatcatc
acctaa

>gi568815591r:99828853_100029620|GENSCAN_predicted_peptide_2|323_aa
MWQKNQTSLADFILEGLFDDSLTHLFLFSLTMVVFLIAVSGNTLTILLICIDPQLHTPMY
FLLSQLSLMDLMHVSTIILKMATNYLSGKKSISFVGCATQHFLYLCLGGAECFLLAVMSY
DRYVAICHPLRYAVLMNKKVGLMMAVMSWLGASVNSLIHMAILMHFPFCGPRKVYHFYCE
FPAVVKLVCGDITVYETTVYISSILLLLPIFLISTSYVFILQSVIQMRSSGSKRNAFATC
GSHLTVVSLWFGACIFSYMRPRSQCTLLQNKVGSVFYSIITPTLNSLIYTLRNKDVAKAL
RRVLRRDVITQCIQRLQLWLPRV

>gi568815591r:99828853_100029620|GENSCAN_predicted_CDS_2|972_bp
atgtggcagaagaatcagacctctctggcagacttcatccttgaggggctcttcgatgac
tcccttacccaccttttccttttctccttgaccatggtggtcttccttattgcggtgagt
ggcaacaccctcaccattctcctcatctgcattgatccccagcttcatacaccaatgtat
ttcctgctcagccagctctccctcatggatctgatgcatgtctccacaatcatcctgaag
atggctaccaactacctatctggcaagaaatctatctcctttgtgggctgtgcaacccag
cacttcctctatttgtgtctaggtggtgctgaatgttttctcttagctgtcatgtcctat
gaccgctatgttgccatctgtcatccactgcgctatgctgtgctcatgaacaagaaggtg
ggactgatgatggctgtcatgtcatggttgggggcatccgtgaactccctaattcacatg
gcgatcttgatgcacttccctttctgtgggcctcggaaagtctaccacttctactgtgag
ttcccagctgttgtgaagttggtatgtggcgacatcactgtgtatgagaccacagtgtac
atcagcagcattctcctcctcctccccatcttcctgatttctacatcctatgtcttcatc
cttcaaagtgtcattcagatgcgctcatctgggagcaagagaaatgcctttgccacttgt
ggctcccacctcacggtggtttctctttggtttggtgcctgcatcttctcctacatgaga
cccaggtcccagtgcactctattgcagaacaaagttggttctgtgttctacagcatcatt
acgcccacattgaattctctgatttatactctccggaataaagatgtagctaaggctctg
agaagagtgctgaggagagatgttatcacccagtgcattcaacgactgcaattgtggttg
ccccgagtgtag

>gi568815591r:99828853_100029620|GENSCAN_predicted_peptide_3|114_aa
MTKLSWNPKSWDPVKRSSGREDEDWDESIEVPILSACLMVTTKIKEDQPHPQRVALQDLP
PPERRQTTTMQDYTAVEMVKLGNLLFGLSDTVPSLMKSVGDWHKYTPFYQSPFK

>gi568815591r:99828853_100029620|GENSCAN_predicted_CDS_3|345_bp
atgactaaattgtcctggaaccctaagtcctgggaccccgtgaagagatctagtggcagg
gaggatgaggactgggatgagtccatagaggttcccatcctctcagcatgtctgatggtc
actaccaagataaaagaagaccaaccacacccacagagggtagccctacaagacttgcct
ccacctgaaagaaggcagaccaccacaatgcaggattataccgctgtggaaatggtgaag
ctgggaaatctcctcttcggcctttcagacacggtgccatccttaatgaagtcagtaggg
gactggcacaagtatacacctttttatcagtctcccttcaagtga

>gi568815591r:99828853_100029620|GENSCAN_predicted_peptide_4|564_aa
MGFHHVGQAGLKLLTSGSQRLSLPAFKTIVEEGLIAGVGSGLKPGEDFTGPKHSGVEKVT
KMCGRFLRRLLAEESRRSTPVGRLLLPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPG
CKAACFDAFHPLSPLRFWVFQVILVAVPSALYMGFTLYHGSSMEAEDIQEELTCPICLDY
FQDPVSIECGHNFCRGCLHRNWAPGGGPFPCPECRHPSAPAALRPNWALARLTEKTQRRR
LGPVPPGLCGRHWEPLRLFCEDDQRPVCLVCRESQEHQTHAMAPIDEAFESYRTGNFDIH
VDEWKRRLIRLLLYHFKQEEKLLKSQRNLVAKMKKVMHLQDVEVKNATQWKDKIKSQRMR
ISTEFSKLHNFLVEEEDLFLQRLNKEEEETKKKLNENTLKLNQTIASLKKLILEVGEKSQ
APTLELLQNPKEVLTRSEIQDVNYSLEAVKVKTVCQIPLMKEMLKRFQERSGEGDGIGKI
LEDIMAKDFLNIIKTKSTDPRCSTNPEYEKYEEKYAKAHHNLLETSVKKKILNATRGEDS
YLQWNKDEVDITLLIGNNASKQTL

>gi568815591r:99828853_100029620|GENSCAN_predicted_CDS_4|1695_bp
atggggtttcaccatgttggccaggctggtctcaaactcctgacctcaggatcccagaga
ctcagccttcctgcattcaaaaccatagtggaagaaggcctgattgctggggtgggcagt
ggcctgaaacctggggaggacttcactgggcctaaacattctggtgtagagaaagtcact
aagatgtgtggcaggttcctgcggcggctgctggcggaggagagccggcgctccaccccc
gtggggcgcctcttgcttcccgtgctcctgggattccgccttgtgctgctggctgccagt
gggcctggagtctatggtgatgagcagagtgaattcgtgtgtcacacccagcagccgggc
tgcaaggctgcctgcttcgatgccttccaccccctctccccgctgcgtttctgggtcttc
caggtcatcttggtggctgtacccagcgccctctatatgggtttcactctgtatcacgga
agcagcatggaagctgaggacatccaggaggagttgacctgccccatctgcctggactat
ttccaggacccggtgtccatcgagtgcggccacaacttctgccgcggctgcctgcaccgc
aactgggcgccgggcggcggcccgttcccctgccccgaatgtcggcacccatcggcgccc
gccgcgctgcgacccaactgggccctggccaggctgactgagaagacgcagcgccggcgc
ctgggccccgtgcccccgggcctgtgcggccgccactgggagccgctgcggctcttctgc
gaggacgaccagcggccagtgtgcctggtgtgcagggagtcccaggagcaccagactcac
gccatggcacccatcgacgaggccttcgagagctaccggacaggtaactttgacatccac
gtggatgaatggaagagaagactaattaggctgctcttgtaccattttaagcaggaggag
aaacttcttaagtctcagcgtaatctcgtggccaagatgaagaaagtcatgcatttacag
gatgtagaagtgaagaacgccacacagtggaaggataagataaagagtcagcgaatgaga
atcagcacggagttttcaaagctgcacaacttcctggttgaagaagaggacctgtttctt
cagagattgaacaaagaagaagaagagacgaagaagaagctgaatgagaacacgttaaaa
ctcaatcaaactatcgcttcattgaagaagctcatcttagaggtgggggagaagagccag
gctcccaccctggagctgcttcagaatccaaaagaagtgttgaccaggagtgagatccag
gatgtgaactattctcttgaagctgtaaaggtgaagacagtgtgccagataccattgatg
aaggaaatgctaaagcgattccaagagaggagtggggagggagatggaataggaaaaata
cttgaagacataatggccaaagattttctgaatataataaaaactaagtccacagatcca
agatgctcaacaaaccctgagtatgagaaatatgaagaaaaatatgccaaggctcatcat
aacttgctggaaaccagtgttaaaaagaaaatcttaaatgcaaccaggggagaggatagt
tacttgcagtggaacaaagacgaagttgacattacacttctcattggaaacaatgccagt
aagcaaactctttaa

>gi568815591r:99828853_100029620|GENSCAN_predicted_peptide_5|298_aa
MVRMVPVLLSLLLLLGPAVPQENQDGRYSLTYIYTGLSKHVEDVPAFQALGSLNDLQFFR
YNSKDRKSQPMGLWRQVEGMEDWKQDSQLQKAREDIFMETLKDIVEYYNDSNGSHVLQGR
FGCEIENNRSSGAFWKYYYDGKDYIEFNKEIPAWVPFDPAAQITKQKWEAEPVYVQRAKA
YLEEECPATLRKYLKYSKNILDRQDPPSVVVTSHQAPGEKKKLKCLAYDFYPGKIDVHWT
RAGEVQEPELRGDVLHNGNGTYQSWVVVAVPPQDTAPYSCHVQHSSLAQPLVVPWEAS

>gi568815591r:99828853_100029620|GENSCAN_predicted_CDS_5|897_bp
atggtaagaatggtgcctgtcctgctgtctctgctgctgcttctgggtcctgctgtcccc
caggagaaccaagatggtcgttactctctgacctatatctacactgggctgtccaagcat
gttgaagacgtccccgcgtttcaggcccttggctcactcaatgacctccagttctttaga
tacaacagtaaagacaggaagtctcagcccatgggactctggagacaggtggaaggaatg
gaggattggaagcaggacagccaacttcagaaggccagggaggacatctttatggagacc
ctgaaagacatcgtggagtattacaacgacagtaacgggtctcacgtattgcagggaagg
tttggttgtgagatcgagaataacagaagcagcggagcattctggaaatattactatgat
ggaaaggactacattgaattcaacaaagaaatcccagcctgggtccccttcgacccagca
gcccagataaccaagcagaagtgggaggcagaaccagtctacgtgcagcgggccaaggct
tacctggaggaggagtgccctgcgactctgcggaaatacctgaaatacagcaaaaatatc
ctggaccggcaagatcctccctctgtggtggtcaccagccaccaggccccaggagaaaag
aagaaactgaagtgcctggcctacgacttctacccagggaaaattgatgtgcactggact
cgggccggcgaggtgcaggagcctgagttacggggagatgttcttcacaatggaaatggc
acttaccagtcctgggtggtggtggcagtgcccccgcaggacacagccccctactcctgc
cacgtgcagcacagcagcctggcccagcccctcgtggtgccctgggaggccagctag

>gi568815591r:99828853_100029620|GENSCAN_predicted_peptide_6|420_aa
MVRMVSVLLSLLLLLGPAVLQETRDGHYSLTYLYTGLSRSGKGTHRLQGTVFLNGHAFFH
YNSEDRKAEPLGPWRHAEGVEDWEKQSQVQKAREDIFMETLNNIMEYYNDGNDPPSVVVT
SHQAPGEKKKLKCLAYDFYPGKIDVHWTRAGEVQEPELRGDVLHGGNGTYLTWLLVHVPP
QDTAPYSCHVQHSSLAQPLVVPGEARMCGRFLRWWLLAEESWHSTPVGRLLFPVLLGFRL
VLLAASGPGVYGDEQSEFVCHTQQPGCKAACFDAFHPLSPLRFWVFQVILVAVPSVLYMG
FTLYHAPVVGYTPWESGVFQYREPPRCGPSEVLERAPRPPAPATLPAFVGRSDGGLRLSV
LFVAVTAVCSCQRLASKMYYGNLDIYELPCNGKVVTATSRVPAKFYPEWNKLLIVPFPGF

>gi568815591r:99828853_100029620|GENSCAN_predicted_CDS_6|1263_bp
atggtaagaatggtgtctgtcctgctgtctctgctgctgcttctgggtcctgctgtcctc
caggagacccgagatggtcattactctctgacctatctctacactgggctgtccaggtct
ggcaaaggcacccacaggctgcagggcactgtcttcctcaatggccatgccttcttccac
tacaacagtgaagacaggaaggctgagcccctgggaccatggagacatgcggaaggagta
gaggactgggagaagcagagccaagttcagaaggccagggaggacatctttatggagacc
ctgaacaacatcatggagtattacaacgacggtaacgatcctccctctgtggtggtcacc
agccaccaggccccaggagaaaagaagaaactgaagtgcctggcctacgacttctaccca
gggaaaattgatgtgcactggactcgggccggcgaggtgcaggagcctgagttacgggga
gatgttcttcacggtggaaacggcacttacctgacctggttgttggtgcatgtgcccccg
caggacacagccccctactcctgccacgtgcagcacagcagcctggcccagcccctcgtg
gtgcccggggaggccaggatgtgtggcaggttcctgaggtggtggctgctggcggaggag
agctggcactccacccccgtggggcgcctcctgtttcccgtgctcctgggattccgcctt
gtgctgctggctgccagtgggcctggagtctatggcgatgagcagagtgaattcgtgtgt
cacacccagcagccgggctgcaaggctgcctgcttcgatgccttccacccgctctccccg
ctgcgtttctgggtcttccaggtcatcttggtggctgtacctagcgtcctctacatgggt
ttcactctgtatcacgcccccgtcgtagggtacacgccctgggaatcgggggtcttccag
tatagggaaccaccgagatgcgggccctccgaagtcctagagagggcgcctcggccgccg
gcacccgccacacttccggcctttgtgggccgcagcgacggcggtctgcggctgtcggtt
ctgtttgttgctgtcactgctgtttgttcttgccagcggctagcctccaagatgtactat
ggaaatttagacatttatgaattgccttgcaatggaaaggtagtaacagcaacttcgaga
gttcctgccaagttctaccccgagtggaacaagttgctgattgttcccttccctggattt
taa

>gi568815591r:99828853_100029620|GENSCAN_predicted_peptide_7|193_aa
MTAESREATGLSPQAAQEKDGIVIVKVEEEDEEDHMWGQDSTLQDTPPPDPEIFRQRFRR
FCYQNTFGPREALSRLKELCHQWLRPEINTKEQILELLVLEQFLSILPKELQVWLQEYRP
DSGEEAVTLLEDLELDLSGQQVPGQVHGPEMLARGMVPLDPVQESSSFDLHHEATQSHFK
HSSRKPRLLQSRX

>gi568815591r:99828853_100029620|GENSCAN_predicted_CDS_7|579_bp
atgactgctgaatcacgggaagccacgggtctgtccccacaggctgcacaggagaaggat
ggtatcgtaatagtgaaggtggaagaggaagatgaggaagaccacatgtgggggcaggat
tccaccctacaggacacgcctcctccagacccagagatattccgccaacgcttcaggcgc
ttctgttaccagaacacttttgggccccgagaggctctcagtcggctgaaggaactttgt
catcagtggctgcggccagaaataaacaccaaggaacagatcctggagcttctggtgcta
gagcagtttctttccatcctgcccaaggagctccaggtctggctgcaggaataccgcccc
gatagtggagaggaggccgtgacccttctagaagacttggagcttgatttatcaggacaa
caggtcccaggtcaagttcatggacctgagatgctcgcaagggggatggtgcctctggat
ccagttcaggagtcctcgagctttgaccttcatcacgaggccacccagtcccacttcaaa
cattcgtctcggaaaccccgcctcttacagtcacgagnn