GENSCAN 1.0	Date run:  2-Nov-116	Time: 22:30:41

Sequence gi568815595f:97987173_98188099 : 200927 bp : 36.68% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.11 PlyA -    177    172    6                               1.05
 1.10 Term -   2653   2432  222  1  0   26   47   162 0.521   1.83
 1.09 Intr -   5876   5680  197  0  2   49   87   224 0.017  16.61
 1.08 Intr -  20732  20592  141  0  0   46   92   113 0.959   6.90
 1.07 Intr -  21866  21784   83  1  2  105   87    37 0.994   3.66
 1.06 Intr -  25395  25172  224  0  2   97  110   111 0.433  10.20
 1.05 Intr -  30550  30483   68  2  2   72  115    53 0.283   4.11
 1.04 Intr -  34978  34874  105  2  0   46   74    64 0.126   0.07
 1.03 Intr -  38507  38395  113  1  2   -6  105   117 0.490   3.10
 1.02 Intr -  39009  38898  112  1  1   98   61    36 0.429   0.42
 1.01 Init -  39537  39408  130  0  1   56   38   301 0.354  22.26
 1.00 Prom -  42604  42565   40                              -3.75

 2.06 PlyA -  43134  43129    6                               1.05
 2.05 Term -  51443  51349   95  0  2  107   42    91 0.522   3.41
 2.04 Intr -  52540  52400  141  2  0   57   51    99 0.378   2.50
 2.03 Intr -  53800  53740   61  1  1  126   25    35 0.080  -1.61
 2.02 Intr -  77413  77333   81  1  0    6   87   101 0.007   0.72
 2.01 Init -  90627  90391  237  0  0   36   59   159 0.078   5.86
 2.00 Prom - 103414 103375   40                              -3.65

 3.03 PlyA - 103894 103889    6                               1.05
 3.02 Term - 104937 104514  424  2  1   55   48   128 0.592  -0.72
 3.01 Init - 108364 108141  224  1  2   88   72   201 0.774  16.58
 3.00 Prom - 117368 117329   40                              -3.95

 4.00 Prom + 119493 119532   40                              -4.65
 4.01 Init + 139675 139740   66  0  0   65  108     6 0.068   1.42
 4.02 Intr + 145508 145790  283  1  1   60   52   130 0.109   2.67
 4.03 Intr + 146136 146341  206  1  2  102    4   112 0.273   2.20
 4.04 Intr + 162196 162478  283  0  1   61   52   147 0.071   4.47
 4.05 Intr + 162824 163101  278  0  2  124   29    70 0.112   1.01
 4.06 Intr + 167739 167862  124  2  1   53   63    97 0.360   2.94
 4.07 Intr + 177145 177248  104  2  2   65   50    80 0.094   0.87
 4.08 Intr + 181510 181792  283  0  1   52   52   122 0.102   1.07
 4.09 Intr + 182138 182300  163  0  1  102   48    57 0.162   1.21
 4.10 Intr + 190354 190479  126  1  0   31   72   105 0.074   2.07
 4.11 Intr + 191175 192613 1439  0  2   44   60   281 0.066   9.19
 4.12 Intr + 199718 199828  111  0  0   69   68    73 0.018   2.83

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  46217  46079  139  1  1   59   47   147 0.922   4.15
S.002 Init -  47815  47691  125  1  2   74   99    28 0.820   2.19
S.003 Sngl -  90627  90256  372  0  0   36   38   201 0.830   5.77


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595f:97987173_98188099|GENSCAN_predicted_peptide_1|464_aa
MTRIHLVEPSGSCVIAPAAHDDDDDDDDDDDDDDDDSHLFLEGEHCLNLFTILRSFRFLA
VFVQRLFSPSDPKDHLGSLFSKQETRMKKDDSTKARPQKYEQLLHIEDNDFAMRPGFGVK
SFQYADTGYRVKTKAKVIKAACTVFACQRRGLYWSPVPVGIDVHVESIDSISETNMDFTM
TFYLRHYWKDERLSFPSTANKSMTFDHRLTRKIWVPDIFFVHSKRSFIHDTTMENIMLRV
HPDGNVLLSLRITVSAMCFMDFSRFPLDTQNCSLELESYAYNEDDLMLYWKHGNKSLNTE
EHMSLSQFFIEDFSASSGLAFYSSTGITTVLTMSTIITAVSASMPQVSYLKAVDVYLWVS
SLFVFLSVIEYAAVNYLTTVEERKQFKKTGKLKCTHCLGHWQNKNVQAYPWKDSISLLHF
REKTWTPMRTPNGGLKRDRAKRASFFSQTATVEWPKDDEKGLEC

>gi568815595f:97987173_98188099|GENSCAN_predicted_CDS_1|1395_bp
atgactaggatccacttagtagagccctcagggtcttgcgttattgctcctgctgcccac
gatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgacagccaccttttt
ctggaaggagaacactgccttaatctgtttacaatcttgcggtcctttcgttttctcgct
gtcttcgtgcagagattgttcagccccagtgaccccaaggatcacctaggtagcttgttc
agcaaacaagaaactagaatgaagaaagatgacagtaccaaagcgcggcctcagaaatat
gagcaacttctccatatagaggacaacgatttcgcaatgagacctggatttggagtgaaa
tcatttcagtatgcagatactggctacagagtcaagacaaaagctaaagttataaaagct
gcttgcacagtctttgcttgtcaaaggagaggactatactggtctccagtgccagtaggt
atagatgtccatgttgaaagcattgacagcatttcagagactaacatggactttacaatg
actttttatctcaggcattactggaaagacgagaggctctcctttcctagcacagcaaac
aaaagcatgacatttgatcatagattgaccagaaagatctgggtgcctgatatctttttt
gtccactctaaaagatccttcatccatgatacaactatggagaatatcatgctgcgcgta
caccctgatggaaacgtcctcctaagtctcaggataacggtttcggccatgtgctttatg
gatttcagcaggtttcctcttgacactcaaaattgttctcttgaactggaaagctatgcc
tacaatgaggatgacctaatgctatactggaaacacggaaacaagtccttaaatactgaa
gaacatatgtccctttctcagttcttcattgaagacttcagtgcatctagtggattagct
ttctatagcagcacaggaatcaccacagtgctgaccatgtccacaatcatcactgctgtg
agcgcctccatgccccaggtgtcctacctcaaggctgtggatgtgtacctgtgggtcagc
tccctctttgtgttcctgtcagtcattgagtatgcagctgtgaactacctcaccacagtg
gaagagcggaaacaattcaagaagacaggaaagcttaaatgtactcactgtcttggtcac
tggcaaaacaagaatgttcaggcctatccctggaaggacagtatctctttacttcatttc
agagaaaagacctggacaccaatgcggacaccaaatggaggactcaaaagggacagagct
aaacgtgccagtttcttctcccagactgctacagtagagtggccaaaggatgatgagaaa
gggctggaatgttag

>gi568815595f:97987173_98188099|GENSCAN_predicted_peptide_2|204_aa
MNGEKLKAFPLRIGTRQGCPLSPLLFNVVLEVLARAITQEKEIKGIQISKQEVKPLLFAD
DTIIHQENLKDSSKKLLELGDEVDDQEHQEQGRLQPWMICESCEDKMESSLRNMGIFLNG
TRAQKVEQDSSGVLTRITADSVCQEGCDKRLKQGSWGGRWSTGYEKTMIYWLSGKIMATY
PKIGDTAILSKFSLYVAAKEIKTG

>gi568815595f:97987173_98188099|GENSCAN_predicted_CDS_2|615_bp
atgaatggggaaaagttgaaagcattccccctgagaattggaacaagacaaggatgccca
ctttcaccacttctattcaacgtagtactggaagtcctagccagagcaatcacacaagag
aaagaaataaagggcatccaaattagtaaacaagaagtcaaaccattgctgtttgctgat
gatacaatcatacaccaagaaaaccttaaagactcatccaaaaagctcctagaactgggt
gatgaggtagatgaccaagaacaccaggaacaggggcgcctgcagccctggatgatctgt
gagtcctgtgaggacaaaatggagtcttctctgagaaatatgggcatatttctcaatggt
accagggcccagaaagtagagcaagattcttcaggtgtcctcactcgtatcacagctgat
tctgtatgccaggaaggatgtgataagagactgaaacaagggtcgtgggggggacgatgg
tctactgggtatgaaaaaacgatgatctactggttatctggcaaaataatggctacatac
cccaagattggcgacacagccatcctttccaaattttctctttatgtcgctgccaaagaa
ataaaaactggctga

>gi568815595f:97987173_98188099|GENSCAN_predicted_peptide_3|215_aa
MGRNQTRKAENSKNQSASSPPKDRSSSPVREQNWMESVFDKLTEVGFRRSLITNFSELKK
HVLTHRKEAKILEKSVGSSGQGNQARERNKEYSIRKRGSQNVSVCRDMIVYLENPIVSGQ
NLLKLISNFSKVSGYKISVQKSQAFLYTNNRQTESQIMSQLPFTIATKRIKYLGIQLTRD
VKDLFKENYKPLLNEIKQDMYKWKNIPCSWIESIS

>gi568815595f:97987173_98188099|GENSCAN_predicted_CDS_3|648_bp
atggggagaaatcagaccagaaaagctgaaaattccaaaaaccagagtgcttcttctcct
ccaaaggaccgcagctcctcaccagtaagggaacaaaactggatggagagcgtgtttgac
aagttgacagaagtaggcttcagaaggtcactaataacaaacttctctgagctaaagaag
catgttctaacccatcgcaaggaagctaaaatccttgaaaaaagtgttggaagttctggc
cagggcaatcaggcaagagaaagaaataaagagtattcaattaggaaaagaggaagtcaa
aacgtctctgtttgcagagacatgattgtatatttagaaaaccccatcgtctcaggccaa
aatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcagtgtgcaa
aaatcacaagcattcctatacacaaacaatagacaaacagagagccaaatcatgagccaa
ctcccattcacaattgctacaaagagaataaaatacctaggaatccaacttacaagggat
gtgaaggacctcttcaaggagaactacaaaccactgctcaatgaaataaaacaggacatg
tacaaatggaagaacattccatgctcatggatagaatcaatatcgtga

>gi568815595f:97987173_98188099|GENSCAN_predicted_peptide_4|1156_aa
MGQAQNKYLNSKREKRRNNRSQRACCEDMEEENATLLTEFVLTGFLYQPQWKIPLFLAFL
VIYLITIMGNLGLIAVIWKDPHLHIPMYLLLGNLAFVDAWISSTVTPKMLNNFLAKSSIQ
VFSIVTILVSYTFVLFAILKKKSDKGVRKAFSTCGAHLFSVSLYYGPLLFIYVGPASPQA
DDQDMRTCSEDMEEENATLLTEFVLTGFLYQPQWKIPLFLAFLVIYLITIMGNLGLIAVI
WKDPHLHIPMYLLLGNLAFVDALLSSSVTLKMLINFLAKSSIQVFTIGTVLISYIFVLYT
ILKKKSVKGMRKAFSTCGAHLLSVSLYYGPLAFMYMGSASPQADDQDMMESLFYTVIVPL
LNPMIYSLRNKQIITRLEIMAPDHHATGGHGILTFLTAPTDNIPIVKSKIGVQERSCSTA
ATYFGQCLNMLYNHRYPGPRLLFCSQLIRTCSEDMEEENATLLTEFVLTGFLYQPQWKIP
LFLAFLVIYLITIMGNLGLIAVIWKDPHLHIPMYLLLGNLAFVDAWISSTVTPKMLNNFL
AKSSIQVFSIVTILISYTFVLFTVLEKKSDKGVRKAFSTCGAHLFSVCLYYGPLLLILNQ
EEVEFLNRPTGFEIVAIINSLLTKKSPGPDGFTAEFYQRPKSPSVYKQLQQSLRIQNHVQ
KSQAFLYTNNRQTESQIMSDLPFTIASKRIKYLGIQLTRDVKDLFKENYKPLLNEIKEDT
NKWKNIPCSWVGRTNIMKMAILPKVIYRFNAIPNKLPMAFFTELEKTTLKFIWSQKRAHI
TKSVLSQKNKAGGSTLPDFKLYYKATVTKTAWYWYQNRDIDQWNRTQPSEIMPHIYNHLI
FDKPDKNKKWGKDSLFNKWCWENWLAICRKLKLDPFLTPYTKVNSRWIKDLHVRHKTIKT
LEENLGNTIQDIGMGKDFMSKTPKATATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKW
EKIFATYSSDKGLISRIYNELKQIYKKKTNNPIKKWAKDMNRHFSKEDIYAAKKHMKKCS
SSLAIREMQIKTTMRYHLTPVRMTIIKMSGNNRCWRRCGEIGTLLHCWLDCKLVQPLWKS
VWRFLRDLELEIPFDPAIPLLGIYPKDYKSCCYKDTCTRTDLAQEDSHHCKMAETKTQYC
HAVTGHVPKDMKQDGX

>gi568815595f:97987173_98188099|GENSCAN_predicted_CDS_4|3468_bp
atgggccaagcacagaacaaatatttaaattccaaaagagagaaaagaaggaataacagg
tctcaaagggcatgctgtgaggacatggaagaggaaaatgcaacattgctgacagagttt
gttctcacaggatttttatatcaaccacagtggaaaatacccctgttcctggcattcttg
gtaatatatctcatcaccatcatggggaatcttggtctgattgctgtcatctggaaagac
cctcaccttcatatcccaatgtacttactccttgggaatttagcttttgtggatgcttgg
atatcatccacagtgaccccaaagatgctgaataacttcttagctaagagttcaattcag
gtattcagcattgtgactattcttgtatcttatacatttgttctcttcgcaatcttaaaa
aagaaatctgataaaggtgtaaggaaagccttttccacctgtggagcccatctcttctct
gtctctttatactatggaccccttctcttcatttatgtgggccctgcatctccgcaagca
gatgatcaagatatgaggacatgcagtgaggacatggaagaggaaaatgcaacattgctg
acagagtttgttctcacaggatttttatatcaaccacagtggaaaatacccctgttcctg
gcattcttggtaatatatctcatcaccatcatggggaatcttggtctgattgctgtcatc
tggaaagaccctcatcttcatatcccaatgtacttactccttgggaatttagcttttgtg
gatgctttgttatcatcctcagtgactctgaagatgctgatcaacttcttagctaagagt
tcaattcaagtttttaccatagggactgttcttatatcttacatatttgtcctctataca
atcttgaaaaagaagtctgtcaaaggtatgagaaaagccttctccacctgtggagctcat
ctcttatctgtatctttatactatgggcccctcgccttcatgtatatgggctctgcatcc
ccacaggctgatgaccaagatatgatggagtctctattttacactgtcatagttccttta
ttaaatcccatgatctacagcctgagaaacaagcaaattatcacaagattagaaattatg
gctcctgatcatcatgcaactggaggccatggaattctaaccttcctaactgctcccaca
gataatattcctattgtgaaatctaagattggtgttcaagaaaggagctgtagtactgca
gccacctactttgggcagtgcctgaatatgttgtacaatcatcggtatccaggtccacgt
cttctcttctgctctcaattgattaggacatgcagtgaggacatggaagaggaaaatgca
acattgctgacagagtttgttctcacaggatttttatatcaaccacagtggaaaataccc
ctgttcttggcattcttggtaatatatctcatcaccatcatggggaatcttggtctgatt
gctgtcatctggaaagaccctcaccttcatatcccaatgtacttactccttgggaattta
gcttttgtggatgcttggatatcatccacagtgaccccaaagatgctgaataacttctta
gctaagagttcaattcaggtattcagcattgtgactattcttatatcttacacatttgtt
ctcttcacagtcttagaaaagaaatctgataagggtgtaaggaaagccttttccacctgt
ggagcccatctcttctctgtctgtttatactatggcccccttctcttaatactaaaccag
gaagaagttgaatttctgaatagaccaacaggctttgaaattgtggcaataattaatagc
ttgctaaccaaaaaaagtccaggaccagatggattcacagctgaattctaccagaggcca
aaatctccttcagtttataagcaacttcagcaaagtctcaggatacaaaatcatgtacaa
aaatcacaagcattcttatacaccaacaacagacaaacagagagccaaatcatgagtgac
ctcccattcacaattgcttcaaagagaataaaatacctaggaatccaacttacaagggat
gtgaaggacctcttcaaggagaactacaaaccactgctcaatgaaataaaagaggataca
aacaaatggaagaacattccatgctcatgggtaggaagaaccaatatcatgaaaatggcc
atactgcccaaggtaatttatagattcaatgccatccccaacaagctaccaatggctttc
ttcacagaattggaaaaaactactttaaagttcatatggagccaaaaaagagcccacatc
accaagtctgtcctaagccaaaagaacaaagctggaggcagcacgctacctgacttcaaa
ctatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaacagagatata
gatcaatggaacagaacacagccctcagaaataatgccgcatatctacaaccatctgatc
tttgacaaacctgacaaaaacaagaaatggggaaaggattccctatttaataaatggtgc
tgggaaaactggctagccatatgtagaaagctgaaactggatcccttccttacaccttat
acaaaagttaattcaagatggattaaagacttacatgttagacataaaaccataaaaacc
ctagaagaaaacctagggaataccattcaggacataggcatgggcaaggacttcatgtct
aaaacaccaaaagcaacggcaacaaaagccaaaattgacaaatgggatctaattaaacta
aagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacctacaaaatgg
gagaaaatttttgcaacctactcatctgacaaagggctaatatccagaatctacaatgaa
ctcaaacaaatttacaagaaaaaaacaaacaaccccatcaaaaagtgggcaaaggatatg
aacagacacttctcaaaagaagacatttatgcagcaaaaaaacacatgaaaaaatgctca
tcatcactggccatcagagaaatgcaaatcaaaaccacaatgagataccatctcacacca
gttagaatgacgatcattaaaatgtcaggaaacaataggtgctggagaagatgtggagaa
ataggaacacttttacactgttggttggactgtaaactagttcaaccattgtggaagtca
gtgtggcgattccttagggatctagaactggaaataccatttgacccagccatcccatta
ctgggaatatacccaaaggattataaatcatgctgctataaagacacatgcacacgaact
gacttagcacaagaagacagccaccattgtaaaatggcggagactaaaacacagtattgc
catgcggttacaggtcatgttcccaaagacatgaaacaagacggagnn