GENSCAN 1.0	Date run:  6-Nov-116	Time: 03:25:04

Sequence gi568815591f:66671881_66909281 : 237401 bp : 45.76% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  10189  10378  190  0  1   39   80   185 0.750   9.97
 1.02 Intr +  10580  10694  115  0  1   90   18    95 0.048   2.21
 1.03 Intr +  20844  21061  218  0  2   90   90    89 0.086   7.45
 1.04 Term +  21609  21787  179  1  2   82   49    55 0.383  -1.15
 1.05 PlyA +  24095  24100    6                               1.05

 2.00 Prom +  48651  48690   40                              -3.06
 2.01 Init +  55337  55425   89  1  2   22   96    88 0.857   3.11
 2.02 Term +  56520  57090  571  0  1    2   54   541 0.579  36.01
 2.03 PlyA +  63552  63557    6                               1.05

 3.04 PlyA -  65008  65003    6                               1.05
 3.03 Term -  68956  68498  459  1  0   74   43   216 0.847  10.79
 3.02 Intr -  69413  69263  151  1  1   97   81    73 0.918   7.66
 3.01 Init -  77176  77142   35  1  2   58  101    16 0.718  -0.76
 3.00 Prom -  80760  80721   40                              -5.86

 4.00 Prom +  85645  85684   40                              -5.66
 4.01 Init +  92980  92990   11  0  2   79   86    11 0.423  -0.78
 4.02 Intr +  97085  97145   61  2  1   70  115    39 0.369   3.54
 4.03 Intr +  98217  98250   34  2  1  103   86    10 0.522   0.10
 4.04 Intr + 100003 100198  196  2  1   64   40   170 0.844   8.27
 4.05 Intr + 103347 103513  167  0  2   68   57   232 0.995  17.70
 4.06 Intr + 111792 111961  170  1  2   50   73   108 0.405   5.17
 4.07 Intr + 118018 118295  278  0  2   43   26   228 0.001   8.41
 4.08 Intr + 121938 122001   64  0  1   88   78    60 0.227   3.72
 4.09 Intr + 123631 123712   82  0  1  107   87   100 0.992  11.01
 4.10 Intr + 125494 125626  133  2  1   70   68   113 0.975   7.20
 4.11 Intr + 127443 127534   92  0  2   98   82    90 0.994   9.04
 4.12 Intr + 133260 133516  257  1  2   89  105   333 0.982  32.26
 4.13 Term + 137006 137404  399  1  0  105   43   289 0.999  21.22
 4.14 PlyA + 137576 137581    6                               1.05

 5.12 PlyA - 137957 137952    6                               1.05
 5.11 Term - 139041 138917  125  1  2   98   49    20 0.229  -2.35
 5.10 Intr - 144056 144000   57  0  0  102  116    37 0.866   6.76
 5.09 Intr - 144322 144273   50  0  2  103   75    50 0.410   3.52
 5.08 Intr - 152301 152118  184  1  1   36   94   337 0.150  27.95
 5.07 Intr - 160600 160520   81  2  0  135   82   102 0.107  13.91
 5.06 Intr - 164920 164855   66  2  0   81  101   105 0.375   9.98
 5.05 Intr - 165914 165867   48  0  0   99   72    50 0.891   3.15
 5.04 Intr - 167749 167660   90  2  0   48  110    38 0.762   1.97
 5.03 Intr - 168054 168017   38  2  2  126   94    38 0.937   6.11
 5.02 Intr - 172944 172710  235  1  1  -25   79   252 0.356   9.75
 5.01 Init - 173066 172946  121  2  1   47   74   235 0.453  18.35
 5.00 Prom - 204751 204712   40                              -3.36

 6.06 PlyA - 204823 204818    6                               1.05
 6.05 Term - 207603 207547   57  0  0   89   54    72 0.654   1.59
 6.04 Intr - 208562 208445  118  1  1   30  123    51 0.235   3.27
 6.03 Intr - 234687 234595   93  2  0   71   76    52 0.093   1.38
 6.02 Intr - 236954 236713  242  2  2  114   69    98 0.889   6.85
 6.01 Init - 237163 237026  138  1  0   87  108    56 0.814   7.66

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  20625  20676   52  2  1   93  103    46 0.888   7.93
S.002 Term - 160600 160482  119  2  2  135   55   129 0.892  13.00


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591f:66671881_66909281|GENSCAN_predicted_peptide_1|233_aa
MFARRALRACAGGAGGAGQAGGVCEAGADWGTQTCRATWASGDLDHGADAGELRLGRQRT
RGRVRGLSVQRARCRHLQRPAVPRRPDLDHFLAASLSGGSPRQALMSYIPLSLGWELPPK
EPPHSQGGHGDSKKGSDSTESTQLLRSQLAPGTYILAGPYPPGLRAEARIMGVSETQPSV
WSPDYSSSPPSAASPPGSQALTHPALSHGVKNPGGAKVFHTYQCSETLRTWTC

>gi568815591f:66671881_66909281|GENSCAN_predicted_CDS_1|702_bp
atgtttgcgcgccgtgcgttacgggcgtgcgctggcggtgccgggggggcggggcaagca
gggggtgtgtgtgaggctggagcggactggggaacccagacctgccgagcgacgtgggcg
agcggtgacctggaccacggcgcagacgcgggcgagctgcggctcggacgccagcggaca
cgcgggcgagtgcgcggcctctccgtccaacgtgctcgttgccggcatctccagcgcccg
gccgtgccccgacggcctgacctggatcacttcctggccgcctccctgtccggcggctcc
cctcgccaagcactgatgtcctacatccccctgagcctaggatgggaactccctcctaag
gaacctccacattcccaaggaggacatggagactccaaaaaaggaagtgattccacagag
tccacacagctgctgagaagtcagctggctcctggcacctacatcctggctggaccctac
cccccaggcttgagggctgaggcaaggatcatgggagtttcagagacacagccaagtgtc
tggtcccctgactactcctcctcccctccctcggctgccagccctcctggctcccaggcc
ctcacccaccctgccctctcccatggagttaagaatcctggaggagcaaaagttttccac
acttaccagtgctcagaaacattgagaacttggacctgctag

>gi568815591f:66671881_66909281|GENSCAN_predicted_peptide_2|219_aa
MEGGVDLKNPVTQLPDLPVELALVLVRGTGFEVHGGTWVKNYSQEVASACSCSHHNHDLR
FHDPQWHSHFTIAITSVFTIFTISSTITSILISTSTSIPNFIFTSILIILASTFSSVLTS
TFTSILIILTSTFSSVLTSTFTSILTSTLTAILTSTLTFTSILTSTFTSILKTTFTYTYT
SILTSTFNSTLISKLTSTLTCIFTSIQISIFTSTFFFFF

>gi568815591f:66671881_66909281|GENSCAN_predicted_CDS_2|660_bp
atggaaggtggggtggacctcaaaaatccagttactcaactacctgatttgccagtggag
ctggccctggttcttgtccgtgggacaggcttcgaggttcatggagggacctgggtcaag
aactattctcaggaagttgcctctgcttgttcctgttcccaccataaccatgaccttcga
tttcatgacccacaatggcattcccatttcaccattgccatcaccagtgtcttcaccatt
tttaccatttcttccaccatcacctccatccttatctccacctccacctctatccccaac
ttcattttcacctccatcctcatcatcctcgcctcgactttcagctctgtcctcacctcc
accttcacctccatcctcatcatcctcacctcaactttcagctctgtcctcacctccacc
ttcacctccatcctcacctcgaccctcaccgccatcctcacctccaccctcaccttcacc
tccatcctcacctccaccttcacctccatcctcaagaccaccttcacctacacctacacg
tctatcctcacctccaccttcaactccactctcatctccaaactcacctccacgctcacc
tgcatcttcacctccatccaaatctccatcttcacctccactttttttttttttttttga

>gi568815591f:66671881_66909281|GENSCAN_predicted_peptide_3|214_aa
MPPPGLQWRKSRVTWDQVPAPLPRPGAVVWVRASHTSAFRGGCGRGPVRPQTLLRSQRPG
RKLRAEQLSAPVRPLRTSPASPPASKPPLARFARVGLGSAASSRLTPTLLLAPPPAPPAN
ARYARRVNVTSGAFDSGREEVRVDPKGRAEWGTALTPKSKWKRAASGVKVGRWGAPEKPA
FPSLSLSPCFRLPTRNSWRATLAPRRLLGLRPRW

>gi568815591f:66671881_66909281|GENSCAN_predicted_CDS_3|645_bp
atgccaccaccagggcttcagtggaggaagtcacgggtgacgtgggatcaagtccccgcg
cccctgccgcggccgggggctgtggtctgggtccgagcgtcccataccagcgctttccgg
ggaggttgtgggaggggccccgtgcgaccacagacgctgcttcggagccagcggcctgga
cggaagctgagagccgagcagctctcagccccagtccgtccgctccgtacctcgcccgcg
tctccgccggcgtccaaaccaccgctcgcccgcttcgcccgggtaggtctgggctccgcg
gccagctcccgcctcacacccaccctcctgctcgccccgcccccggcaccgccagcgaac
gcacgttacgcgcggcgcgtaaacgtcacttccggggcctttgactctggacgggaggaa
gtgcgagtggatccaaagggtcgagcggagtggggtaccgccctgacgcccaagagcaaa
tggaagagggcggcctccggggtaaaggtggggcgctggggagccccggagaaaccggcg
tttcctagtctgtcgctcagtccctgcttccggcttccgacgcgcaacagctggagggcg
acgctggctccgcggcgactcctggggctgcggccgcggtggtag

>gi568815591f:66671881_66909281|GENSCAN_predicted_peptide_4|647_aa
MALYHSCRQSTRLLGTVAQEKEEMSACTFGYELHEVVSRKKMSLKSERRGIHVDQSDLLC
KKGCGYYGNPAWQGFCSKCWREEYHKARQKQIQEDWELAERLQREEEEAFASSQSSQGAQ
SLTFSKFEEKKTNEKTRKVTTVKKFFSASSRVGSKKAEIQEAKAPSPSINRQTSIETDRV
SKEFIEFLKTFHKTGQEIYKQTKLFLEGMHYKRLQNKRTVASTWKRMWIQTKWRTDTPST
DKILMEEVKLEEQLKEAVEEDKQALADTEDLQQISQKLVEEANMYSIQGFCKDSLEVADV
LEKATQVKPDGQTAVGFHRMYRPLACEDLSIEEQSECAQDFYHNVAERMQTRGKVPPERV
EKIMDQIEKYIMTRLYKYVFCPETTDDEKKDLAIQKRIRALRWVTPQMLCVPVNEDIPEV
SDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIFNAIKITKNEPASADDFLPTLIYIVL
KGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKLDAQSLNLSQEDFDRY
MSGQTSPRKQEAESWSPDACLGVKQMYKNLDLLSQLNERQERIMNEAKKLEKDLIDWTDG
IAREVQDIVEKYPLEIKPPNQPLAAIDSENVENDKLPPPLQPQVYAG

>gi568815591f:66671881_66909281|GENSCAN_predicted_CDS_4|1944_bp
atggctttgtaccatagctgcagacaaagcacacgattgctgggcactgtggctcaagag
aaggaggagatgtctgcctgtacttttggttatgagcttcatgaggtggttagcaggaag
aagatgagccttaagtctgaacgccgaggaattcatgtggatcaatcggatctcctgtgc
aagaaaggatgtggttactacggcaaccctgcctggcagggtttctgctccaagtgctgg
agggaagagtaccacaaagccaggcagaagcagattcaggaggactgggagctggcggag
cgactccagcgggaggaagaagaggcctttgccagcagtcagagcagccaaggggcccaa
tccctcacattctccaagtttgaagaaaagaaaaccaacgagaagacccgcaaggttacc
acagtgaagaaattcttcagtgcatcttccagggtcggatcaaagaaggcagaaattcag
gaagcaaaagctcccagtccttccataaaccggcaaaccagcattgaaacggatagagtg
tctaaggagttcatagaatttctcaagaccttccacaagacaggccaagaaatctataaa
cagaccaagctgtttttggaaggaatgcattacaaaaggctacaaaacaaaagaacagtt
gccagcacttggaagaggatgtggatccaaaccaaatggaggacagatactccctctacg
gacaagatactcatggaagaagtcaagttagaagagcagctgaaggaggctgtagaagaa
gataagcaagcattggcagatactgaggacttgcagcagatcagccaaaaattggtggag
gaggcaaatatgtatagcattcagggcttctgcaaggactcgttagaggttgcagatgtt
ttggagaaggcaacacaagttaagccagatggtcagactgctgtgggcttccacaggatg
tatcggcccttggcgtgtgaggatctaagcattgaagaacagtcagagtgtgctcaggat
ttctaccacaatgtggccgaaaggatgcaaactcgtgggaaagtgcctccagaaagagtc
gagaagataatggatcagattgaaaagtacatcatgactcgtctctataaatatgtattc
tgtccagaaactactgatgatgagaagaaagatcttgccattcaaaagagaatcagagcc
ctgcgctgggttacgcctcagatgctgtgtgtccctgttaatgaagacatcccagaagtg
tctgatatggtggtgaaggcgatcacagatatcattgaaatggattccaagcgtgtgcct
cgagacaagctggcctgcatcaccaagtgcagcaagcacatcttcaatgccatcaagatc
accaagaatgagccggcgtcagcggatgacttcctccccaccctcatctacattgttttg
aagggcaaccccccacgccttcagtctaatatccagtatatcacgcgcttctgcaatcca
agccgactgatgactggagaggatggctactatttcaccaatctgtgctgtgctgtggct
ttcattgagaagctagacgcccagtctttgaatctaagtcaggaggattttgatcgctac
atgtctggccagacctctcccaggaagcaagaagctgagagttggtctcctgatgcttgc
ttaggcgtcaagcaaatgtataagaacttggatctcttgtctcagttgaatgaacgacaa
gaaaggatcatgaatgaagccaagaaactggaaaaagacctcatagattggacagatgga
attgcaagagaagttcaagacatcgttgagaaatacccactggaaattaagcctccgaat
caaccgttagcagctattgactctgaaaacgttgaaaatgataaacttcctccaccactg
caacctcaagtttatgcaggatga

>gi568815591f:66671881_66909281|GENSCAN_predicted_peptide_5|364_aa
MWNQSELEERLPGRPEARMRRRVATAGRSVFAGSDPAANTISYKEELSHCLCYYYRRDFP
ACSVGRSKGLTLSEQALHTKRLSPGGHKQKVGQKLLNGHCKPASSGCSRCRTLASPEAGS
DKGSMCEDCGPDPSPTSEEMTDSMAGHLPSEDSDCGMEMLTDKGLSEDPRPEERPVEDSQ
GDVIRPLWKQVELLFNTRYGTSGELGWLKPIKIEPEDLDIIAVTVPTKAIGILEPVKMPY
SKFLMHPEELFVVGLSEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPELLTEGVKEPI
IDSQERDSRDPLVGESLKRQGFQVRDDTDVSSLIDLICKFKNKKFYTHPGFIPKLLLCNF
GLHP

>gi568815591f:66671881_66909281|GENSCAN_predicted_CDS_5|1095_bp
atgtggaaccaatcggaactcgaggagcggctgccgggtcgtccagaagcgcgcatgcgc
agacgcgtggccacagccggccggtcagtgttcgcaggctccgacccggcggccaacacc
ataagctacaaggaggagctttcccactgcctgtgctactactaccggcgcgacttccca
gcctgcagcgtagggcgcagcaagggcctgacgctgagcgagcaggcgctgcacaccaag
cggttgtcgcctggcgggcacaaacagaaggtcgggcagaagctccttaatggccactgc
aagccggctagctccggctgcagccgttgccgcacactcgcctcacctgaggctgggtca
gacaagggcagcatgtgtgaagactgcgggccagacccgtcaccaacctctgaggaaatg
acagactcaatggctgggcacctgccatcggaggattctgattgtgggatggagatgctg
acagacaaaggcctgagtgaggacccacggcctgaggagaggcccgtggaggacagtcaa
ggtgacgtgatccggcccctgtggaagcaggtggagctgctcttcaacacaagatacgga
acctccggggagctgggttggctgaagccaatcaaaattgagccagaggatctggacatc
attgcggtcactgtcccaaccaaggccattggcatcttggaaccagtcaagatgccgtac
tccaagtttctgatgcacccggaggagctgtttgtggtggggttgtctgaaggcatctcc
ctccgcaggcccaactgcttcgggatcgccaagctctggaagattctggaggccagcaac
agcatccagtttgtcatcaagaggcctgagctgctcactgagggagtcaaagagcccatc
attgacagtcaagagagggattccagggaccctctggtgggcgagagcctgaagagacag
ggctttcaagtgcgtgatgacacagatgtgtcaagcttaatagatcttatatgtaaattt
aagaataagaagttttatacccaccctggttttattccaaagttactgctctgcaatttt
gggctccatccttag

>gi568815591f:66671881_66909281|GENSCAN_predicted_peptide_6|215_aa
MRPELPVMNWCFLTHLAIKWVVHSSIPSSDGGGIYVIGLQLVLKAQPEMMASWGVPYDQL
TEEEKTRGWFTGGSARYAGTTQKWTAAALQPLSGTSLMDSSEEKSFQWTELQAVHLVVHF
AWKEMARTSDSKFFRFGTQNGFLAPQLADSLLWNLVILNDRNPLHTAVAPGSLCILIKRQ
GSCSKTGGVYDATKQRSAATGKVDSKGTIPCVTDK

>gi568815591f:66671881_66909281|GENSCAN_predicted_CDS_6|648_bp
atgagacctgaactacctgtcatgaactggtgttttctgacccacctagccataaagtgg
gtcgtgcacagcagcattccatcatcagatggaggtggtatatatgtgatcgggctccag
ctggtcctgaaggcacaacctgaaatgatggcctcatggggagttccctatgatcagttg
acagaggaagagaagactaggggctggttcacaggtggttctgcacgatatgcaggcacc
acccaaaaatggacagctgcagcactacagcccctttctgggacatcccttatggacagc
agtgaagaaaaatctttccagtggacagaacttcaagcagtgcacctggttgtgcacttt
gcatggaaggaaatggccagaacatcggactccaagttcttcaggtttgggactcagaat
ggcttccttgctcctcagcttgcagacagcctattgtggaaccttgtgatcctaaatgac
cgaaatccactccatacagcagtggcccctggcagcctttgcattctcatcaagaggcag
ggtagctgttcaaagacaggtggtgtctatgatgcaactaagcagcgctcggcagccacg
gggaaagtggacagcaaagggaccattccctgtgtcactgataagtga