GENSCAN 1.0	Date run:  6-Nov-116	Time: 04:21:43

Sequence gi568815583f:41131383_41379386 : 248004 bp : 44.25% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    379    584  206  2  2   63  115    42 0.424   3.32
 1.02 Term +   2161   2604  444  0  0   20   44   189 0.666   2.94
 1.03 PlyA +   5087   5092    6                               1.05

 2.00 Prom +   9716   9755   40                              -3.96
 2.01 Init +  31780  32061  282  0  0   89    2   297 0.350  18.28
 2.02 Term +  32540  32992  453  1  0   80   36   315 0.906  20.66
 2.03 PlyA +  34004  34009    6                               1.05

 3.10 PlyA -  34031  34026    6                               1.05
 3.09 Term -  52674  52652   23  1  2   97   47    16 0.539  -3.13
 3.08 Intr -  53211  52884  328  0  1   86   53   179 0.833   9.47
 3.07 Intr -  58746  58555  192  0  0   56   92   101 0.898   6.99
 3.06 Intr -  60203  60060  144  2  0   74   94     9 0.564   0.58
 3.05 Intr -  64473  64393   81  0  0  116   88    27 0.963   5.33
 3.04 Intr -  64655  64551  105  2  0   64  115    21 0.854   2.81
 3.03 Intr -  78205  78119   87  1  0  105   67    62 0.486   5.97
 3.02 Intr -  84451  84393   59  2  2   35  115    63 0.887   2.30
 3.01 Init -  85382  85286   97  2  1   56   68    67 0.465   1.97
 3.00 Prom -  93069  93030   40                              -4.46

 4.00 Prom +  96877  96916   40                              -7.26
 4.01 Init + 100001 100067   67  1  1   80   68   169 0.871  15.33
 4.02 Intr + 112285 112357   73  2  1   57   96   102 0.314   6.36
 4.03 Intr + 125528 125608   81  2  0   47   84   135 0.655   7.75
 4.04 Intr + 131374 131501  128  1  2   36   65   129 0.945   5.72
 4.05 Intr + 139175 139236   62  0  2  116   91   100 0.978  11.55
 4.06 Intr + 147385 147507  123  0  0  107   81   132 0.998  15.18
 4.07 Term + 147954 148007   54  2  0  119   43    91 0.997   5.26
 4.08 PlyA + 150480 150485    6                               1.05

 5.00 Prom + 156078 156117   40                              -3.66
 5.01 Init + 160451 160623  173  1  2   62   63   133 0.852   7.12
 5.02 Intr + 200774 201148  375  2  0  131   66   194 0.022  15.63
 5.03 Intr + 210309 210360   52  0  1   41   74    26 0.023  -4.59
 5.04 Intr + 211004 211072   69  1  0   65  109    53 0.744   4.48
 5.05 Intr + 217716 217859  144  2  0   62   68   103 0.902   6.18
 5.06 Intr + 219651 219747   97  2  1   19   97    77 0.319   1.28
 5.07 Intr + 226767 226876  110  1  2   34   95    75 0.572   2.80
 5.08 Intr + 234020 234207  188  1  2   60  103    21 0.505  -0.71
 5.09 Intr + 240145 240302  158  1  2   86   58   106 0.762   7.05
 5.10 Intr + 244330 244446  117  2  0   61   95    25 0.139   0.94

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815583f:41131383_41379386|GENSCAN_predicted_peptide_1|216_aa
XLFLTQSLFGRLFTRTHVTFGAEDPGQGESFRRLVPCPRPHSMRSSTYDLGSSDQPAQGT
FNISPISNQKLQKLDSGPQTPQQDLINFAFKVYDNREEAAKRQRISELRLVASTVRETPA
TSPAHKNFKTPKLQQPGIPPGPPPPGSCFKCQKSGQWAKECPQPGIPPKLCPICAGPHWK
LDCPTCLAATPRAPRALAQGSLTDSFLDLLGLAAED

>gi568815583f:41131383_41379386|GENSCAN_predicted_CDS_1|651_bp
nctttgttcctcacacaaagcctgtttggtcgtctcttcacacggactcatgtgacattt
ggtgccgaagacccgggacagggggagtccttcaggagactggtcccctgtcctcgccct
cactccatgaggagctccacctatgatctcgggtcctcagaccaaccagcccaaggaaca
tttaacatctcaccaatttcaaatcagaaactccaaaagctagactccggccctcaaacc
ccacaacaagacttaattaactttgccttcaaggtgtacgataatagagaagaggcagcc
aagcggcaacgtatttctgagttgcgattagttgcctccactgtgagagaaaccccagcc
acatctccagcacacaagaacttcaaaacgcctaaactgcagcagccaggcattcctcca
gggcctcctcccccaggatcttgtttcaagtgccagaaatctggccaatgggccaaggaa
tgcccacagcccgggattcctcctaagctgtgtcccatctgtgcaggaccccactggaaa
ttggactgtccaacttgcctggcagccactcccagagcccccagagcactggcccaaggc
tctctgactgactccttcctagatctgctcggcttagcggctgaagactga

>gi568815583f:41131383_41379386|GENSCAN_predicted_peptide_2|244_aa
MMRCTLENRNAQTKQLQTAVSNVEKHFGELCQIFAAYVRKTARLRDKADHLVNEINAYAA
TETPHLKLGLMNFDDEFAKLQDYRQAEVERLEAKAETELQRTAMDASRTSRHLEETINNF
ERQKMKDIKTIFSEFITIEMLFHGKALEVYTAAYRNIQNIDEDEDLEVFRNSLYAPDYSS
CLDTVRANSKSPLQRSLSAKCVSGTRQVSTCRLRKDQQAEDDEDEELDVTEEENFLNYTF
PFSS

>gi568815583f:41131383_41379386|GENSCAN_predicted_CDS_2|735_bp
atgatgaggtgcaccctggaaaatcggaacgctcaaacgaaacaactgcaaacagctgtc
tcaaatgtggagaagcattttggagaactgtgccaaatcttcgctgcctatgtgcggaaa
actgccaggctgagagacaaagcagaccacctggtgaatgaaatcaatgcgtatgctgct
acagagaccccacatttaaagctgggcctgatgaactttgatgatgagtttgccaaactt
caggattatcgacaagcagaggttgaaagacttgaagccaaagcagaaacggaattacag
agaactgcaatggatgctagccgaacaagtcgtcatctggaggaaactattaacaacttt
gaaaggcagaaaatgaaggatataaagactatattttctgaatttatcacaatcgaaatg
ttatttcacggcaaagctttagaggtctacactgctgcctaccggaatatacaaaacatt
gatgaagatgaagatttagaggttttccgaaattctctgtatgcaccagattattcatct
tgtttagatactgtaagagcgaattcaaagtcacctcttcagagatcactgtcagctaag
tgtgtatctggaacaagacaggtatccacttgtcgactaagaaaggatcaacaagcagaa
gatgatgaggatgaagagttagatgttacagaagaagaaaattttcttaactacacattt
ccattttcatcataa

>gi568815583f:41131383_41379386|GENSCAN_predicted_peptide_3|371_aa
MKVEDLNVCEPASPAPEAPATSLLNDLKYSPSEEEEVTYTVINQFQQKFGAAILHIKKQN
VLSVAAEGANVCRHGKLCWLQVATNCRVYLFDIFLLGSRAFHNGLQMILEDKRILKVIHD
CRWLSDCLSHQYGILLNNVFDTQVADVLQFSMETGGYLPNCITTLQESLIKHLQVAPKYL
SFLEKRQKLIQENPEVWFIRPVSPSLLKILALEATYLLPLRLALLDEMMSDLTTLVDGYL
NTYREGSADRLGGTEPTCMELPEELLQLKDFQKQRREKAAREYRVNAQGLLIRTVLQPKK
LVTETAGKEEKVKGFLFGKNFRIDKAPSFTSQDFHGDVNLLKEESLNKQATNPQHLPPTE
EGETRNQSVSK

>gi568815583f:41131383_41379386|GENSCAN_predicted_CDS_3|1116_bp
atgaaagttgaagacctaaatgtatgtgagcctgcttctcctgcccctgaagcaccagct
acctctctgctgaatgacctcaagtacagcccatcagaggaagaggaggtgacatacaca
gtcattaatcaattccagcagaagtttggtgctgcgatactccatatcaagaagcagaat
gtcctgagtgtggcagcagaaggagcgaatgtatgtcgccatggcaaactgtgctggctg
caggtggccacaaattgccgagtttacttatttgacattttccttctgggaagtcgagct
ttccacaatggacttcagatgatactagaagacaagagaattttgaaggttatccatgat
tgtcgttggctttctgattgcctctctcatcagtatggaattttgctgaataatgtcttt
gacacacaggtagcagatgtacttcagttttccatggaaacgggtggctatcttccaaac
tgcatcactactttgcaggagagtttaatcaaacaccttcaagtagcccctaaatatctc
tcctttctagaaaagagacaaaaactaattcaggaaaatccagaagtatggttcatccga
cctgtttcaccctctttactgaaaattttggccctggaagctacctacctgttacccctt
cgcttggcactcctagatgagatgatgtctgacctaaccaccctggtggatggttaccta
aacacgtatcgcgaagggtctgcagaccggcttggaggcactgagcctacatgtatggag
ctgccagaggaactgcttcaactcaaggacttccagaagcagcgcagggagaaagctgca
agagaatatagggtgaatgcacagggactcctgataaggacagtgctacagccaaagaaa
ttagtgacagagacagcagggaaagaggagaaagtcaaaggcttcttatttggtaaaaat
tttaggatagataaagctccaagttttacatctcaagactttcacggggatgtgaattta
ctgaaagaagaatctttgaataaacaagctacaaatcctcaacatctacctcccacagag
gaaggggaaaccagaaaccagagtgtctccaagtga

>gi568815583f:41131383_41379386|GENSCAN_predicted_peptide_4|195_aa
MGSRASTLLRDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAIN
PLGDRIINAFFPEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFR
LYDLDKDEKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVL
EKVDVEQKMSIRFLH

>gi568815583f:41131383_41379386|GENSCAN_predicted_CDS_4|588_bp
atgggttctcgggcctccacgttactgcgggacgaagagctcgaggagatcaagaaggag
accggcttttcccacagtcaaatcactcgcctctacagccggttcaccagcctggacaaa
ggagagaatgggactctcagccgggaagatttccagaggattccagaacttgccatcaac
ccactgggggaccggatcatcaatgccttctttccagagggagaggaccaggtaaacttc
cgtggattcatgcgaactttggctcatttccgccccattgaggataatgaaaagagcaaa
gatgtgaatggacccgaaccactcaacagccgaagcaacaaactgcactttgcttttcga
ctatatgatttggataaagatgaaaagatctcccgtgatgagctgttacaggtgctacgc
atgatggtcggagtaaatatctcagatgagcagctgggcagcatcgcagacaggaccatt
caggaggctgatcaggatggggacagtgccatatctttcacagaatttgttaaggttttg
gagaaggtggatgtagaacagaaaatgagcatccgatttcttcactaa

>gi568815583f:41131383_41379386|GENSCAN_predicted_peptide_5|495_aa
MVLNKTVLTSDASCTSEVPPATCIFDQVATDLESPMTLLEPAFDFVGFLIVFSSFKVRWF
SATRWRKREHPLGLASAFPERFTALTGEDHGPEGPRQVPGEVHRVGEHCVTLCALEHSAP
LRLQPRRQLRAGGWLLSPQPCGAERRGPLHHLRIPLHGGRKRSLVNRPLSATTKVPPGRR
CTTPQHFWLIPIKCILHIVQATKLLKALKGYIKHEARKGNENQDESQTSASSCDETEIQI
SNQEEAERQPLGHVTKTRRRCKTVRVDPDSQNHEKQESQDLRATAKVPSPPDEHQEAENA
VSSDFKKLHEAHFKEMESIDQYIERKKKHFEEHNSMNELKQQPINKGGVRTPVPPRGRLS
VASTPISQRRSQGRSCGPASQSTLGLKGSLKRSAISAAKTGVRFSAATKDNEHKRSLTKT
PARKSAHVTVSGGTPKGEAVLGTHKLKTITGNSAAVITPFKLTTEATQTPVSNKKPVFDL
KASLSRPLNYEPHKX

>gi568815583f:41131383_41379386|GENSCAN_predicted_CDS_5|1485_bp
atggtcctcaacaagactgtcctcacttcagatgccagctgtacttcggaggtaccccca
gccacctgcattttcgaccaagtggctacagatttggagagtcccatgaccctcttagaa
ccagcttttgatttcgttggttttcttattgtttttagttcctttaaagttaggtggttc
tccgccacccggtggagaaagcgggaacaccctctcgggctagcctctgcctttcccgaa
cgcttcactgcactcactggagaagaccacggccccgagggaccgcgacaggtcccaggc
gaggtgcaccgagtcggcgagcactgcgtgacactgtgcgcactggaacacagcgcacct
ctcaggctgcagccaagacggcagctgcgggccggcggctggctcctcagcccccagccc
tgcggggccgagcggcgaggaccccttcaccacctgcgtatcccactccatggaggtcgt
aaaagaagcttggtcaatcgccctctcagtgccaccacaaaagtccccccggggcggcgt
tgcacaacgccacagcatttctggctcatccccatcaaatgcatcttgcacattgtgcag
gcaaccaagttgttaaaagccttgaaaggctacattaaacatgaggcaagaaaaggaaat
gagaatcaggatgaaagtcaaacttctgcatcctcttgtgatgagactgagatacagatc
agcaaccaggaagaagctgagagacagccacttggccatgtcaccaaaacaaggagaagg
tgcaagactgtccgtgtggaccctgactcacagaatcatgaaaagcaggaaagccaggat
ctcagagctactgcaaaagttccttctccaccagacgagcaccaagaagctgagaatgct
gtttcctcagactttaagaagcttcatgaagctcattttaaggaaatggagtccattgat
caatatattgagagaaaaaagaaacattttgaagaacacaattccatgaatgaactgaag
cagcagcccatcaataagggaggggtcaggactccagtacctccaagaggaagactctct
gtggcttctactcccatcagccaacgacgctcgcaaggccggtcttgtggccctgcaagt
cagagtaccttgggtctgaaggggtcactcaagcgctctgctatctctgcagctaaaacg
ggtgtcaggttttcagctgctactaaagataatgagcataagcgttcactgaccaagact
ccagccagaaagtctgcacatgtgaccgtgtctgggggcaccccaaaaggcgaggctgtg
cttgggacacacaaattaaagaccatcacggggaattctgctgctgttattaccccattc
aagttgacaactgaggcaacgcagactccagtctccaataagaaaccagtgtttgatctt
aaagcaagtttgtctcgtcccctcaactatgaaccacacaaagnn