GENSCAN 1.0	Date run:  6-Nov-116	Time: 04:37:07

Sequence gi568815588r:124347432_124549943 : 202512 bp : 49.97% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1133   1259  127  2  1   59   90    57 0.578   3.68
 1.02 Intr +   5863   5974  112  0  1   74   98    65 0.176   6.05
 1.03 Intr +  16366  16494  129  2  0   27  115    96 0.201   6.87
 1.04 Intr +  18816  18896   81  1  0  119  100    17 0.823   5.61
 1.05 Intr +  22075  22133   59  2  2   58   90    23 0.196  -1.90
 1.06 Intr +  23512  23652  141  0  0   78   42    57 0.159   0.65
 1.07 Intr +  27465  27567  103  2  1   59   77    71 0.602   2.85
 1.08 Intr +  38183  38278   96  0  0   73   61    88 0.375   4.58
 1.09 Intr +  41944  42068  125  2  2   64    1   139 0.540   3.10
 1.10 Term +  46681  46740   60  0  0  122   54    33 0.507   1.10
 1.11 PlyA +  48752  48757    6                               1.05

 2.12 PlyA -  49895  49890    6                               1.05
 2.11 Term -  50671  50511  161  2  2   63   55   172 0.999   9.50
 2.10 Intr -  53553  53409  145  0  1   57   86   134 0.999   9.96
 2.09 Intr -  54408  54295  114  0  0   81   88   141 0.999  14.04
 2.08 Intr -  55624  55496  129  1  0   77   95    78 0.996   8.29
 2.07 Intr -  58132  58005  128  2  2  104   53   146 0.999  13.10
 2.06 Intr -  61206  61111   96  1  0   86   91    46 0.933   4.68
 2.05 Intr -  61534  61310  225  2  0  105   98   112 0.998  11.86
 2.04 Intr -  64769  64542  228  0  0  102  102    57 0.815   6.34
 2.03 Intr -  71772  71699   74  2  2   43   92    51 0.526   0.05
 2.02 Intr -  72360  72237  124  1  1   67  106    47 0.185   4.04
 2.01 Init -  86824  86776   49  1  1   82   58    46 0.542   0.11
 2.00 Prom -  95230  95191   40                              -3.96

 3.04 PlyA -  95447  95442    6                               1.05
 3.03 Term - 100716  99998  719  1  2   99   41   741 0.986  64.15
 3.02 Intr - 102637 102299  339  2  0  101   99   199 0.813  17.75
 3.01 Init - 104761 104722   40  1  1  106   86   -30 0.321  -2.56
 3.00 Prom - 106503 106464   40                              -3.26

 4.00 Prom + 111254 111293   40                              -6.46
 4.01 Init + 114432 114556  125  2  2  106  109   352 0.977  36.74
 4.02 Intr + 114705 114793   89  0  2   66   92   -26 0.040  -4.79
 4.03 Intr + 121333 121461  129  2  0   77   36   105 0.014   4.87
 4.04 Intr + 125698 125848  151  2  1   71   42    81 0.012   1.02
 4.05 Intr + 127468 127585  118  1  1  107   49    49 0.012   3.37
 4.06 Intr + 134282 134376   95  1  2   78   98    31 0.046   1.86
 4.07 Intr + 136708 136895  188  1  2   91   78   257 0.948  24.33
 4.08 Intr + 140991 141144  154  1  1  126  110   184 0.996  23.53
 4.09 Intr + 147368 147498  131  2  2   52   86    63 0.184   2.84
 4.10 Intr + 149433 149593  161  1  2   56   66   182 0.245  12.51
 4.11 Intr + 150605 150697   93  1  0   98   96    49 0.975   6.86
 4.12 Term + 157343 157519  177  1  0   78   54   113 0.817   4.59
 4.13 PlyA + 157957 157962    6                               1.05

 5.00 Prom + 163812 163851   40                              -4.16
 5.01 Init + 169755 169840   86  2  2   85   82   138 0.454  13.24
 5.02 Intr + 173859 173955   97  0  1  105   89    35 0.747   5.31
 5.03 Term + 174868 175053  186  0  0   96   54   103 0.363   5.19
 5.04 PlyA + 175682 175687    6                               1.05

 6.12 PlyA - 176638 176633    6                               1.05
 6.11 Term - 179863 179816   48  1  0  119   44    37 0.141  -0.30
 6.10 Intr - 183563 183479   85  1  1   79   81    32 0.293   1.42
 6.09 Intr - 184895 184703  193  0  1   76   89    76 0.726   5.05
 6.08 Intr - 185402 185331   72  0  0   49   92    62 0.270   2.08
 6.07 Intr - 192754 192683   72  2  0   45   97    89 0.876   4.88
 6.06 Intr - 192957 192891   67  0  1   40   48    89 0.765  -1.42
 6.05 Intr - 194527 194471   57  1  0   83   91    41 0.756   2.98
 6.04 Intr - 195052 194974   79  0  1   48   94    58 0.359   1.95
 6.03 Intr - 196022 195685  338  2  2  103   68    48 0.383  -1.38
 6.02 Intr - 196703 196571  133  1  1   56   85    59 0.306   3.05
 6.01 Init - 202341 202262   80  0  2   84   67    51 0.033   1.14

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588r:124347432_124549943|GENSCAN_predicted_peptide_1|344_aa
XAAWLRAAPKPFQQQNRSAKAQGGLTAQIQRVLPPPDTPSPLQAASGDPALKSPGMATCP
SVPVGDPPSLSPMGAESTGQGKKKGVRCADSTGHMDEDQPRHFPPRKFGVFVAMQKSGSF
LQPVCLSFLTAWQLVSKKARGDTAKPLRVQAPIIPTCPGKDLVGGNCIMEGPSTGGLGKQ
SLDRPARILTPLPGKPLSAAGGKAKTGSIKMRIPVPAGVFEKQINPSDNRAAAWVLVYCS
FNGVVTSLRGQAYLENVNGFTQCTEYVSEPASGHPRAEGTPISGRPGSNALRAAPPAVPT
RVGPYGCEQFRPKAPGPGLGVIDLRGTKCRQQVPAHLFTTGHRP

>gi568815588r:124347432_124549943|GENSCAN_predicted_CDS_1|1035_bp
nnggccgcctggttgagagcagcaccaaagccattccaacagcagaaccgcagtgccaag
gctcaaggtgggctaacagctcagattcagcgagttctacctcccccagacacccccagc
cctctgcaggcagcttctggagatcccgccctcaagagtccaggcatggccacctgcccc
tcagtccccgtgggagatcctccgagcctgagccccatgggtgcagagagtactggccaa
ggaaagaagaaaggtgtgcgctgtgcagacagcaccggtcacatggatgaggaccaaccc
agacatttcccaccacgcaaattcggggtctttgttgcaatgcagaagtcgggatctttc
ctgcaaccagtctgcctcagcttccttacagcatggcagctggtttccaagaaagcaaga
ggggacactgctaagcctcttcgagttcaagctcccataattcccacatgtcctgggaag
gacctggtgggaggtaactgcatcatggagggtccaagcacaggtggacttggtaagcag
agcctcgacagacctgcccgcatactgacacccctgccagggaagcccctcagtgcagcg
gggggcaaagcgaaaacgggaagtatcaagatgaggattccagtccctgctggagtcttt
gagaagcaaattaacccctcggacaacagggcagcagcctgggtacttgtttactgttcc
ttcaatggcgttgtcacgtcccttcgtgggcaagcgtacctggagaatgtgaatggattt
acacagtgcaccgagtacgtgagcgagcctgcctccggtcaccccagggctgaagggacc
cccatctcaggacggccgggaagcaacgctttgcgggcagcgccccctgccgtcccaacg
cgcgtggggccctatggctgcgagcagttccggccaaaagccccaggacccggacttggg
gttattgacttgcgcggcactaagtgccgtcagcaggttcctgcccacctgttcaccact
ggacataggccctga

>gi568815588r:124347432_124549943|GENSCAN_predicted_peptide_2|490_aa
MGFCYVGQAGLELLTSAGPPTGHCGLMECGAGSCQRLPSERGGEGHTGPDCPYCWMTGLL
VSKGGQGLFSSRQRRRPRGLSSDLWFFYLKDTMFSKLAHLQRFAVLSRGVHSSVASATSV
ATKKTVQGPPTSDDIFEREYKYGAHNYHPLPVALERGKGIYLWDVEGRKYFDFLSSYSAV
NQGHCHPKIVNALKSQVDKLTLTSRAFYNNVLGEYEEYITKLFNYHKVLPMNTGVEAGET
ACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIP
YNDLPALEVLFIADEIQTGLARTGRWLAVDYENVRPDIVLLGKALSGGLYPVSAVLCDDD
IMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEEENLAENADKLGIILRNELMKLPSDVVT
AVRGKGLLNAIVIKETKDWDAWKVCLRLRDNGLLAKPTHGDIIRFAPPLVIKEDELRESI
EIINKTILSF

>gi568815588r:124347432_124549943|GENSCAN_predicted_CDS_2|1473_bp
atgggcttttgctatgttggccaggctggtctcgaactcctgacctcagctgggcccccg
actggtcattgtggtctaatggagtgtggtgccggcagctgccagcgcctgccctctgag
aggggtggcgaggggcacacaggaccagactgcccctactgttggatgactggtcttctc
gtcagcaagggcggacaaggactcttctcgtcccgccagaggaggcgaccgaggggcctg
agctcagatctgtggtttttctacttgaaggacacaatgttttccaaactagcacatttg
cagaggtttgctgtacttagtcgcggagttcattcttcagtggcttctgctacatctgtt
gcaactaaaaaaacagtccaaggccctccaacctctgatgacatttttgaaagggaatat
aagtatggtgcacacaactaccatcctttacctgtagccctggagagaggaaaaggtatt
tacttatgggatgtagaaggcagaaaatattttgacttcctgagttcttacagtgctgtc
aaccaagggcattgtcaccccaagattgtgaatgctctgaagagtcaagtggacaaattg
accttaacatctagagctttctataataacgtacttggtgaatatgaggagtatattact
aaacttttcaactaccacaaagttcttcctatgaatacaggagtggaggctggagagact
gcctgtaaactagctcgtaagtggggctataccgtgaagggcattcagaaatacaaagca
aagattgtttttgcagctgggaacttctggggtaggacgttgtctgctatctccagttcc
acagacccaaccagttacgatggttttggaccatttatgccgggattcgacatcattccc
tataatgatctgcccgcactggaggttctctttattgctgatgaaatacagacaggattg
gccagaactggtagatggctggctgttgattatgaaaatgtcagacctgatatagtcctc
cttggaaaggccctttctgggggcttataccctgtgtctgcagtgctgtgtgatgatgac
atcatgctgaccattaagccaggggagcatgggtccacatacggtggcaatccactaggc
tgccgagtggccatcgcagcccttgaggttttagaagaagaaaaccttgctgaaaatgca
gacaaattgggcattatcttgagaaatgaactcatgaagctaccttctgatgttgtaact
gccgtaagaggaaaaggattattaaacgctattgtcattaaagaaaccaaagattgggat
gcttggaaggtgtgtctacgacttcgagataatggacttctggccaagccaacccatggc
gacattatcaggtttgcgcctccgctggtgatcaaggaggatgagcttcgagagtccatt
gaaattattaacaagaccatcttgtctttctga

>gi568815588r:124347432_124549943|GENSCAN_predicted_peptide_3|365_aa
MAHACNLSTLRTQASLGSADPAPGWKATAKPQPKASPSGAIPNPAPPTAGPWATGMLAWQ
DGGAKAAPSHHKISFSVLDILDPQKFTRAALPAVRPAPREARKSLAEVEAGKDASSRDPV
RQLETPDAAGPGAGQASPLEGSEAEEEEDAEDPRRPRLRERAARLLPGLARSPDAPAGAL
ASGEPCEDGGGGPVRSPPGSPGSPRPRRRRLEPNCAKPRRARTAFTYEQLVALENKFRAT
RYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGADGAAQVGGGAPQPGAAGGGG
GGGSGGSPGPPGTGALHFQTFPSYSAANVLFPSAASFPLTAAAPGSPFAPFLGPSYLTPF
YAPRL

>gi568815588r:124347432_124549943|GENSCAN_predicted_CDS_3|1098_bp
atggctcatgcctgtaatctcagcactttgagaacccaagcttcacttggcagcgcggac
ccggctcctggctggaaagctaccgccaagccacagccgaaggcaagcccgagcggcgcc
atccccaaccccgcgccgccgaccgccggcccgtgggcgacgggcatgctggcatggcag
gacggcggggccaaggcggctccctcccaccacaagatttctttctctgtcctggacatc
ctggacccacagaaattcacccgcgcagcgctccctgccgtgcgcccggctccccgggaa
gccaggaaaagtttggcggaggtcgaagcggggaaagatgccagctccagggaccctgtc
cgacagctggagacccctgatgctgcgggcccaggcgccggccaggcgtcccccctggag
ggttccgaggcggaagaggaggaggatgcggaggatccgaggaggccgcggctgcgggag
cgggctgcgcgcttgctgccgggcctagcgcgctcacctgacgccccggccggggcattg
gcgtctggggagccctgcgaggacggcgggggcggccctgtgaggtcccccccgggatcc
cccggctccccgcgtcccaggcgccggcgcctggagcccaactgcgccaagccgcggcgc
gcgcgcaccgccttcacctacgagcagctggtggccttggagaacaagttccgggccacg
cgctacctgtcagtgtgcgagcgcctgaacctcgcgctgtctctcagcctcaccgagacg
caggtcaaaatctggttccagaatcgcaggaccaagtggaagaagcagaacccgggtgcc
gacggcgcggcgcaggtggggggtggcgcgccccagccaggggcggcggggggcggcggc
ggcggcggctcggggggcagtcctggccctcccggcaccggcgctctgcacttccagact
ttcccctcctactccgcggccaatgtcctcttcccgtccgccgcctccttcccgctgacg
gctgccgcccccgggagccctttcgcgccgttccttgggccttcctacctgacccccttc
tacgccccgcgtctatga

>gi568815588r:124347432_124549943|GENSCAN_predicted_peptide_4|536_aa
MAPWGKRLAGVRGVLLDISGVLYDSGAGGGTAIAGSVEAVASADHGRPHCCPRRAPGLCW
LGLRGQTGRPPGQGPSTLAQCLWGQIITLRAREAPYTLPRMPVGLVADAQSGCEGAASGW
KPLANYKGSVAQVTKLMNGVLPLPPVPHNVQEAILAKQCHTCPLWAPGFLSECTCPNSGF
VRDVVVIVTTTAITAIYLVFEMCQPHFLAPPSTYPTLLEFFLSERVGPVHTCLCARLKRS
RLKVRFCTNESQKSRAELVGQLQRLGFDISEQEVTAPAPAACQILKEQGLRPYLLIHDGV
RSEFDQIDTSNPNCVVIADAGESFSYQNMNNAFQVLMELEKPVLISLGKGLSVGFFASPP
DCESLWSRLGLGVSLSPAKGCGASGIVNAKGDQASGTGPVLSSRYLASCGQLPVLSIPCS
VLLSPRRYYKETSGLMLDVGPYMKALEYACGIKAEVVGKPSPEFFKSALQAIGVEAHQLF
SQSASFTFRMRYSPPHRRKKTPHGGLVNLGLSFSDAGAVRLGGSGAVDSWWVTVAA

>gi568815588r:124347432_124549943|GENSCAN_predicted_CDS_4|1611_bp
atggcaccgtggggcaagcggctggctggcgtgcgcggggtgctgcttgacatctcgggc
gtgctgtacgacagcggcgcgggcggcggcacggccatcgccggctcggtggaggcggtg
gccagtgctgaccacggacgaccccactgttgcccccggcgagcaccaggactctgctgg
ttagggctgcgcggtcagacagggcggccacctgggcaaggcccctccactctggcccag
tgcctctggggccagatcatcaccctcagggcccgggaagctccgtacaccctccctcgc
atgcctgtggggctcgtggcagatgcccagagtggctgcgaaggtgctgcctctggttgg
aagcccttggccaattacaaggggagtgtggcacaagttacaaagctcatgaatggagtc
ctgcccctacccccagtgccccacaacgtgcaagaagccatattggcaaagcagtgccac
acctgcccactgtgggcacctggcttcctctcagaatgtacctgccccaacagtgggttt
gtcagagacgtggttgtcattgtcaccaccacagcaattactgccatttatttagtattt
gaaatgtgccagcctcatttcctggctccaccttccacataccccacgctgctcgagttc
tttctatccgagagggtggggccagtgcacacctgcctgtgcgcaagactgaagcgttcc
cggctgaaggtgaggttctgcaccaacgagtcgcagaagtcccgggcagagctggtgggg
cagcttcagaggctgggatttgacatctctgagcaggaggtgaccgccccggcaccagct
gcctgccagatcctgaaggagcaaggcctgcgaccatacctgctcatccatgacggagtc
cgctcagaatttgatcagatcgacacatccaacccaaactgtgtggtaattgcagacgca
ggagaaagcttttcttatcaaaacatgaataacgccttccaggtgctcatggagctggaa
aaacctgtgctcatatcactgggaaaaggtttgtctgtgggcttctttgcttccccacca
gactgtgagtccctgtggagcaggctggggctgggagtatccctgagtcctgcaaagggc
tgtggagcatctgggatcgttaatgccaagggggaccaagccagcgggacaggcccggtg
ctcagctcccgatacttagcatcctgcggtcagctccccgtgctcagcatcccgtgctcc
gttctgctctctcctaggcgttactacaaggagacctctggcctgatgctggacgttggt
ccctacatgaaggcgcttgagtatgcctgtggcatcaaagccgaggtggtggggaagcct
tctcctgagtttttcaagtctgccctgcaagcgataggagtggaagcccaccagttattt
tcacagtcagcttccttcacatttcgaatgagatacagcccacctcaccgccgaaagaag
acccctcatgggggtctggtgaatctgggtttgtcgttttcggatgctggggcagtgcgt
ctgggagggagcggggctgtggattcctggtgggtcaccgtggctgcttga

>gi568815588r:124347432_124549943|GENSCAN_predicted_peptide_5|122_aa
MIGDDIVGDVGGAQRCGMRALQVRTGKFRKYPQPGSMEQHLALPGPPPALWHLSTAPFCT
ADSWRIGHGCSPRLLEVPSSHSVPAAQALDNSVSSVGGPVPWVANPHDAMSPAAPEGAAA
LP

>gi568815588r:124347432_124549943|GENSCAN_predicted_CDS_5|369_bp
atgattggggacgatatcgtgggcgacgtcggcggtgcccagcggtgtggaatgagagcg
ctgcaggtgcgcaccgggaagttcaggaaatacccccagccaggctctatggagcagcac
ctcgcccttccagggccacccccagccctctggcacctcagcacggccccattctgcaca
gcggactcctggcgcattggacatggctgctcccccagactcctcgaggtcccatccagc
cacagcgttcctgctgcccaggccctggacaacagtgtctcctccgtggggggtcctgtg
ccatgggtggcaaatcctcatgatgccatgagtcctgcagccccagagggtgctgctgcc
ctgccgtga

>gi568815588r:124347432_124549943|GENSCAN_predicted_peptide_6|407_aa
MPFPAMPTPAMPTGPEAGPAWQPLPQISAGLSASAIRGASQGHPTAVTRLGCEARVRQLW
EGTITVPGEELGTSAVPSQHITAATVQPPAPALSSLERWLWDAGRPRTWADRGCLGVWRT
GSVYPQVGHKLLSLWGVRPANPCGGHTGRSSQGGGVWEDEGLYCPSWNGGIFSPSQPSDK
ALSRETLDLSTQAGNRLPGPKSHLLAASPQGQHVGTGHSANDQMSASPQPGHEAKREKPG
WVPGRKSLPPPASPPKRTDTETARRCMNGWARAPAGAIGTVGTDMLALSCYTLTSWVMLG
PEQQCPETTQAHLGPWAEILNSALHWKELGLLGEMADSRAEAKTEQMNLKHLFGPKCKEG
LKEREHWEAPNAQSVFLGLSLTRCQGDKKDGLAGKDVAIKGSKMQIP

>gi568815588r:124347432_124549943|GENSCAN_predicted_CDS_6|1224_bp
atgcctttcccggccatgcccaccccggccatgcccacagggccagaggcaggcccagcc
tggcagccccttccccagatctctgctgggctctcagcatcagccatccgaggggcctcg
cagggtcaccccactgctgtcaccaggcttggctgcgaggccagggtgcggcagctctgg
gaaggcacaatcactgtcccaggagaggaactgggcacctctgccgttcccagtcagcac
atcaccgcagccacggtacagccacctgcgcctgcactgtcctcgctggaaagatggctg
tgggatgcgggcagaccccgcacctgggccgaccgggggtgtctaggggtctggaggaca
ggcagtgtctaccctcaggttggccacaaactcctgtccctctggggagtgcgccctgcc
aacccctgtgggggccatacaggaaggagcagccagggaggtggagtctgggaggatgaa
ggcttgtactgcccgagctggaacgggggcattttctctcccagtcaaccctcggacaag
gccctgtccagggagaccctggacctgagcacacaggctggaaacagactgccagggccc
aagtcccacctgctggctgcatcccctcagggacagcatgtgggcacagggcactctgcg
aatgaccagatgtcagcatctccccagcctggccacgaagcaaagcgggagaaaccaggc
tgggtccccggccgcaagtccctgccgccccctgcatctccaccgaagcgcacagacaca
gaaacagcacggcgctgcatgaacggctgggccagggcacctgcaggggccatagggaca
gttgggacagacatgctggcactgtcctgctacacccttaccagctgggtgatgctgggg
cctgagcagcaatgcccagagacaacacaagcacacctggggccctgggctgagattcta
aacagtgccctccactggaaggaactggggctccttggagaaatggccgattccagggct
gaagcaaagactgaacaaatgaacctgaaacatctttttgggccaaaatgcaaggaaggg
ctcaaagaacgggaacactgggaggcccccaatgcccagagcgtgttcttaggcctctct
ctgacaaggtgccagggagacaagaaggacgggctggctggaaaagatgtagcaatcaaa
gggtcaaaaatgcagattccctga