GENSCAN 1.0	Date run:  6-Nov-116	Time: 05:27:22

Sequence gi568815588r:32169066_32446915 : 277850 bp : 40.71% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   8346   8478  133  2  1  106   65    46 0.722   4.46
 1.02 Intr +   9931   9993   63  2  0   80   96    48 0.100   2.57
 1.03 Term +  13575  13717  143  1  2   75   54    91 0.056   1.51
 1.04 PlyA +  15744  15749    6                               1.05

 2.03 PlyA -  18135  18130    6                               1.05
 2.02 Term -  19683  19255  429  0  0   77   38   457 0.999  33.92
 2.01 Init -  23486  23433   54  2  0   79  115    41 0.633   7.23
 2.00 Prom -  24324  24285   40                              -6.95

 3.03 PlyA -  24466  24461    6                               1.05
 3.02 Term -  30749  30660   90  2  0   93   45    60 0.317  -1.06
 3.01 Init -  40188  39799  390  0  0   71   13   204 0.329   8.02
 3.00 Prom -  40242  40203   40                              -5.65

 4.05 PlyA -  40359  40354    6                               1.05
 4.04 Term -  41178  40963  216  0  0   67   54   179 0.463   8.56
 4.03 Intr -  58369  58327   43  0  1   89   92    25 0.017   0.32
 4.02 Intr -  58812  58678  135  2  0  103   -4   112 0.042   2.26
 4.01 Init -  61253  61123  131  2  2   59   92   102 0.948   7.37
 4.00 Prom -  70539  70500   40                              -5.75

 5.02 PlyA -  70548  70543    6                               1.05
 5.01 Sngl -  74035  73610  426  1  0   44   32   220 0.957   8.04
 5.00 Prom -  78165  78126   40                              -5.05

 6.16 PlyA -  79343  79338    6                               1.05
 6.15 Term -  84669  84509  161  1  2  101   44    64 0.084   0.42
 6.14 Intr -  84914  84742  173  1  2   67   31    87 0.012  -0.44
 6.13 Intr - 102852 102489  364  1  1  100  113   228 0.900  19.82
 6.12 Intr - 103102 102961  142  1  1   85  110   155 0.975  16.41
 6.11 Intr - 104216 104098  119  0  2   60   94   162 0.961  13.26
 6.10 Intr - 115985 115633  353  1  2   82   76    84 0.325   0.64
 6.09 Intr - 117777 117629  149  0  2   54  116    26 0.971   0.11
 6.08 Intr - 117950 117861   90  2  0   72   87    94 0.990   6.97
 6.07 Intr - 118209 118033  177  0  0   78   87   233 0.999  21.39
 6.06 Intr - 122257 122098  160  0  1   83   55   154 0.952  10.67
 6.05 Intr - 123579 123431  149  0  2   49   80    96 0.979   3.01
 6.04 Intr - 124129 123923  207  1  0   19  106   219 0.993  15.15
 6.03 Intr - 124672 124527  146  2  2   56   87   220 0.996  17.78
 6.02 Intr - 136866 136707  160  0  1  121   94    96 0.969  12.14
 6.01 Init - 149590 149513   78  1  0   43   36   101 0.271   1.51
 6.00 Prom - 163606 163567   40                              -5.65

 7.00 Prom + 174874 174913   40                              -5.65
 7.01 Init + 176568 176619   52  2  1   60   98    51 0.955   4.67
 7.02 Intr + 177343 178007  665  2  2   70   39   537 0.992  37.55
 7.03 Intr + 188101 188193   93  0  0   24   98    78 0.211   1.64
 7.04 Term + 195864 196019  156  2  0  105   50    57 0.279   0.55
 7.05 PlyA + 196276 196281    6                               1.05

 8.00 Prom + 197603 197642   40                              -6.05
 8.01 Init + 200074 200172   99  0  0   61   63   143 0.888   9.41
 8.02 Intr + 210031 210156  126  0  0   65   77   110 0.180   7.56
 8.03 Intr + 210472 210544   73  0  1   90   91    23 0.179   0.86
 8.04 Term + 210688 210743   56  2  2   63   47    22 0.103  -7.66
 8.05 PlyA + 210777 210782    6                               1.05

 9.04 PlyA - 211547 211542    6                               1.05
 9.03 Term - 212230 212202   29  2  2  127   43    50 0.848   1.66
 9.02 Intr - 215444 215346   99  0  0   67  116    93 0.918   9.16
 9.01 Init - 220838 220736  103  2  1   74   58    90 0.438   5.05
 9.00 Prom - 231022 230983   40                              -3.65

10.07 PlyA - 231890 231885    6                               1.05
10.06 Term - 240017 239878  140  0  2   65   54   108 0.484   2.24
10.05 Intr - 266625 266475  151  0  1    8   82   167 0.188   6.91
10.04 Intr - 268843 268777   67  0  1  101   65    57 0.175   2.69
10.03 Intr - 269299 269204   96  0  0   76   86    52 0.576   2.01
10.02 Intr - 272352 272316   37  1  1   88   86    14 0.096  -2.40
10.01 Init - 277085 276944  142  2  1   53   33   155 0.113   5.26

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  58812  58659  154  2  1  103   42   119 0.926   5.21


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588r:32169066_32446915|GENSCAN_predicted_peptide_1|112_aa
MDLFWGATQIWVEVTQEVQVTPTPCYCPQSRSPQVRLHGIPNEEGKGSRSIPQERFLDVT
QEITQGGRPQLLPRVGGEMPAGNFISADTATARQPHRTGDKTRNKLLLPPHL

>gi568815588r:32169066_32446915|GENSCAN_predicted_CDS_1|339_bp
atggacttgttctggggagcaactcagatttgggtggaggtaactcaggaggttcaagtc
acacccactccctgctactgtccccagagtaggagtccccaagtcaggctccatggtatc
cccaatgaagagggaaaggggtcccgatccataccccaagagaggttcttggatgtcaca
caagaaataactcagggaggaagaccccagctgctgccccgggtgggtggggagatgcca
gcgggaaacttcatctccgcagacacagcaactgcccgacagccccacaggactggggac
aagacacgaaataaattgcttctcccaccacacctctga

>gi568815588r:32169066_32446915|GENSCAN_predicted_peptide_2|160_aa
MVVQQCECTLMPLKMAKMLFADKFPKTAENFRALSTGEKGFSYKGSCFHRIIPGFMYQGR
DFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGK
HVVFGKVKEGMNIMEAMERFGSRNGKTSKKITIADCGQLE

>gi568815588r:32169066_32446915|GENSCAN_predicted_CDS_2|483_bp
atggttgtacaacaatgtgaatgtaccttaatgccgcttaaaatggctaaaatgctgttt
gcagacaagttcccaaagacagcagaaaattttcgtgctctgagcactggagagaaagga
tttagttataagggttcctgctttcacagaattattccagggtttatgtatcagggtcgt
gacttcacacgccataatggcactggtggcaagtccatctatggggagaaatttgaagat
gagaacttcatcctaaagcatacaggtcctggcatcttgtccatggcaaatgctggaccc
aacacaaatggttcccagtttttcatctgcactgccaagactgagtggttggatggcaag
catgtggtctttggcaaagtgaaagaaggcatgaatattatggaggccatggagcgcttt
gggtccaggaatggcaagaccagcaagaagatcaccattgctgactgtggacaactcgaa
taa

>gi568815588r:32169066_32446915|GENSCAN_predicted_peptide_3|159_aa
MGKDFMAKTSKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTEWEKIFAIYPSDKGL
ISRIYKELKQIYKKKTNNPIKKWVKDMNRHFSKEDIYAANGHMKKCSSSLAIREMQIKTT
MTYHLTPVRMLMINNKCPMQKVQGPQLKEIFHQNAINAL

>gi568815588r:32169066_32446915|GENSCAN_predicted_CDS_3|480_bp
atgggcaaggacttcatggctaaaacatcaaaagcaatggcaacaaaagccaaaattgac
aaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactaccatcagagtg
aacaggcaacctacagaatgggagaaaatttttgcaatctacccatctgacaaagggcta
atatccagaatctacaaagaacttaaacaaatttacaagaaaaaaacaaacaaccccatc
aaaaagtgggtgaaggatatgaacagacacttctcaaaagaagacatttatgcagccaac
ggacacatgaaaaaatgctcatcatcactggccatcagagaaatgcaaatcaaaaccaca
atgacataccatctcacaccagttagaatgctaatgattaataataagtgccccatgcaa
aaagtacaaggtcctcagctaaaggaaatctttcaccaaaatgccatcaatgcactttga

>gi568815588r:32169066_32446915|GENSCAN_predicted_peptide_4|174_aa
MQTGPKAAQAESWLPVRRENFRELPGLKRPHGGKQWTSRVLLHGLQVPAHQTPSSSAFGL
LDLHQWFARDSRAFGHRPKAALMASLLLSPVLTCKMLETHIKQFNHVRKSKATVLNLPAL
QNALEGLLKPRLLGSTHSVSASVGLRRDWRICIAPASQVMPMLLTGDHTLRSIA

>gi568815588r:32169066_32446915|GENSCAN_predicted_CDS_4|525_bp
atgcagacaggaccaaaggcagcccaggctgagtcctggttaccagtgagacgtgaaaac
ttcagagagctgccagggctgaaaaggccacatggagggaaacagtggacctctcgggtc
ctcctgcatggactccaagttcctgcccatcagactccaagttcctcagcttttggactc
ttggacttacaccagtggtttgccagggactctcgggcctttggccacagaccgaaagct
gcactgatggcttccctacttttgagcccagttttgacttgtaaaatgttggagacgcac
atcaaacagttcaaccacgttcgaaaatctaaagcaacagttctcaatttaccagcgctt
cagaatgccctggagggcttgttaaaacctagattgctgggcagcacccacagtgtgtcc
gcttcagtaggtctgaggcgggactggagaatttgcattgctcctgcttcccaggtgatg
ccgatgctgctgactggggaccacactttgagaagcattgcttga

>gi568815588r:32169066_32446915|GENSCAN_predicted_peptide_5|141_aa
MEGATAVSGGLLFRGSQQPLTLKTSTAIAAIMDSAEKEMCLPTEGATTGLLELELSPSFL
LPATTCMPGLQSYGCSTHTCASDPSPQPLTSIHAAETDTAASVGMPEPQTLKLPPQQAHL
RLGPWSHNCSSLEKKRTGGPQ

>gi568815588r:32169066_32446915|GENSCAN_predicted_CDS_5|426_bp
atggaaggtgccacagcagtctccggtggcctgctcttcagaggatcccaacaacctttg
acactgaagacctcaacagccattgcagctatcatggattctgcagaaaaagagatgtgc
ctccctacagaaggagccaccactgggctccttgagctggagctttcaccttccttcctc
ctgcctgcaaccacatgtatgcctggactccagagctatggctgctccacacacacctgt
gcttcagaccccagcccacagccactcacgagcatccatgctgcagaaacagacactgct
gcctcagtgggcatgcctgaacctcaaacattgaagctaccaccacagcaggcacacctg
cgccttgggccctggagccataattgctcctcattggagaaaaagagaacaggaggacct
cagtaa

>gi568815588r:32169066_32446915|GENSCAN_predicted_peptide_6|875_aa
MTVKLADVGQEEEQIWRVMEQGCRCYEHHLQRAISAQQVYGEKRDNMVIPVPEAESNIAY
YESIYPGEFKMPKQLIHIQPFSLDAEQPDYDLDSEDEVFVNKLKKKMDICPLQFEEMIDR
LEKGSGQQPVSLQEAKLLLKEDDELIREVYEYWIKKRKNCRGPSLIPSVKQEKRDGSSTN
DPYVAFRRRTEKMQTRKNRKNDEASYEKMLKLRRDLSRAVTILEMIKRREKSKRELLHLT
LEIMEKRYNLGDYNGEIMSEVMAQRQPMKPTYAIPIIPITNSSQFKHQEAMDVKEFKVNK
QDKADLIRPKRKYEKKPKVLPSSAAATPQQTSPAALPVFNAKDLNQYDFPSSDEEPLSQV
LSGSSEAEEDNDPDGPFAFRRKAGCQYYAPHLDQTGNWPWTSPKDGGLGDVRYRYCLTTL
TVPQRCIGFARRRVGRGGRVLLDRAHSDYDSVFHHLDLEMLSSPQHSPVNQFANTSETNT
SDKSFSKDLSQILVNIKSCRWRHFRPRTPSLHDSDNDELSCRKLYRSINRTGTAQPGTQT
CSTSTQSKSSSGSAHFAFTAEQYQQHQQQLALMQKQQLAQIQQQQANSNSSTNTSQGFVS
KTLDSASAQFAASALVTSEQLMGFKMKDDVVLGIGVNGVLPASGVYKGLHLSSTTPTALV
HTSPSTAGSALLQPSNITQTSSSHSALSHQVTAANSATTQVLIGNNIRLTVPSSVATVNS
IAPINARHIPRTLSAVPSSALKLAAAANCQVSKVPSSSSVDSVPRVKGQDRHWFTLSSTA
LAVSFWLPLSRPYGSLGQWGREDSPPYVLSSQLASGGLQTPRNPWPLPPANKIILSTRCL
GQKDLNQQMLFAVFAGTACRSQTGAPSLGEAELRW

>gi568815588r:32169066_32446915|GENSCAN_predicted_CDS_6|2628_bp
atgacagtgaaacttgctgacgtaggtcaggaggaggaacagatttggagagtcatggag
caggggtgtcgatgttatgaacatcatcttcagcgggctatttcagcacagcaggtgtat
ggcgagaagagggataatatggttataccggtcccagaggcagaaagtaatattgcttac
tatgagtctatatatcctggggaatttaagatgccaaagcagctcattcacatacagcct
tttagtttggatgctgaacagcctgattatgatttggattctgaagatgaagtatttgtg
aataaactgaaaaagaaaatggacatctgcccattgcaatttgaggagatgattgaccgc
ctagaaaaaggcagtggtcagcagccagtcagtctgcaggaagccaaactactgctaaaa
gaagatgatgaactaattagagaagtttatgaatattggattaaaaagagaaaaaactgt
cgagggccatctcttattccatcagtaaaacaagagaagcgagatggttccagcacaaat
gatccttatgtggcttttagaaggcgtactgaaaaaatgcagactcgaaaaaatcgcaaa
aatgatgaagcctcttacgaaaaaatgcttaagctgcgacgagatctaagtcgagctgtt
actattctagagatgataaaaagaagagaaaaaagtaaaagagagctattgcacttaaca
ctggaaattatggaaaagaggtataatttgggcgactacaatggagagatcatgtctgag
gttatggcacagagacagccaatgaaacctacttatgccatccccatcatccctattact
aatagcagtcaatttaaacaccaggaagcaatggatgtgaaggagttcaaagttaataag
caagataaagccgatcttatccgaccgaaacggaaatatgaaaagaagcccaaagtctta
ccatcgtctgccgctgctactccccaacagacgagtcctgctgcactgccagtcttcaat
gctaaagatctgaatcagtatgactttcccagctcagacgaagaacctctctcccaggtt
ttgtctggctcttcggaagctgaggaagacaatgatcctgatggtccttttgctttccgt
aggaaagcaggctgtcagtactatgctcctcacttagaccaaactggcaactggccttgg
actagtcctaaagatggaggattaggggatgtgcgatatagatactgcttaactactctc
accgtaccccaaaggtgtattggatttgcacgaagacgggttgggcgcggtggaagggtc
ttactggacagagctcattcagactatgacagtgtgtttcaccatctggatttggaaatg
ctttcctcaccacaacattctccagtcaatcagtttgccaatacctcagaaacaaatacc
tcggacaaatctttctctaaagacctcagtcagatactagtcaatatcaaatcatgtaga
tggcggcattttaggcctcggacaccatccctacatgacagtgacaatgatgaactctcc
tgtagaaaattatataggagtataaaccgaacaggaacagcacaacctgggacccagaca
tgcagtacctctacgcaaagtaaaagtagcagtggttcagcacactttgcatttacagcc
gaacaataccagcaacatcaacagcaactggcactcatgcagaaacagcagcttgcacaa
attcagcaacagcaagcaaatagtaattcctccaccaacacatcacagggttttgtttct
aagactttggattctgctagtgcacagtttgctgcttctgctttggtgacatcagaacaa
ctgatgggattcaagatgaaggatgatgtggtgcttggaatcggggtgaatggcgtcctt
ccagcctcaggagtatacaagggcttacacctcagtagtactacaccaacagcacttgta
catacaagtccatcaacggcaggttcagctttgttacagccttcaaatattacacagact
tcaagttcccacagtgcactgagtcatcaagtaactgctgccaattctgcaacaactcag
gttctgattgggaacaacattcgattaactgtaccttcatcagttgccactgtaaactct
attgccccaataaatgcacgacatatacctaggactttaagtgctgttccatcatctgcc
ttaaagctggccgctgcagcaaactgtcaagtttccaaggtcccatcttcatcctctgta
gattcagttccaagggtaaaggggcaggacagacactggttcacactgtcttccacagct
ctggcagttagcttctggttacctttatccaggccctacgggtcactggggcagtggggt
agggaggatagccccccatatgtgctttcatctcagctggccagtggaggtcttcagacc
ccaagaaacccctggcctttacctcctgccaataagattatcctctcaactagatgcctg
gggcagaaagacctaaatcaacaaatgctctttgcagtgtttgctggaacagcttgcaga
tcacagactggtgctcccagccttggagaagcggagctcaggtggtga

>gi568815588r:32169066_32446915|GENSCAN_predicted_peptide_7|321_aa
MRGRFYYPGVRTQLPQQATQPVPLSGCTRPNPRTKTQNGCRQLRHVTPLCLSGPRTPRDP
GTSGQGQRVALEGAPLGRGGRGSRLGEAGYRPGRRLRVGGEEKMAAILCGFAAPPPPQAA
EGAGLTVGRTGELTRTDSSSFSIPVGICGTALFIEAYSCRSGRSSQRKTGSGFEASSARA
RNDSLLISGAADTSPLWGNGPGQRDHGEPGVRSPLANRCRGLEGRSAEPAVRALTPAGRN
RVHDVSSRVKAVEAWKPKTYMTSLHELLTQLIGYRLYIFWPKRILLLPMWPREAKRLDTP
GLHSKESTKRSIREKVLEDMP

>gi568815588r:32169066_32446915|GENSCAN_predicted_CDS_7|966_bp
atgagaggaagattctattatcctggtgtccgaacccaacttccacaacaagccacccag
cccgttcccctctccggatgcacaaggcccaacccaagaactaagacacaaaatggctgc
cggcagcttcgtcacgtgacccctttgtgcctttcgggcccccgaactccgcgggacccg
ggtacaagtggccagggtcagcgggtggccttagaaggggccccgctgggccgcggcggc
cgggggtcgaggctgggggaggcggggtataggcccggccggcgactgagagtcggcggc
gaagagaagatggcggccattttgtgtgggtttgctgctccgccgccgccgcaggcagca
gagggagcgggcctgacggtgggtcggacaggggagttaacacgtaccgactcctcttcc
ttctccattccggtgggcatctgcggcacggccctgtttatcgaggcgtattcgtgcagg
tcgggcagatcctcacagcggaaaaccggcagcggcttcgaggcgtctagcgcccgcgcc
cgaaacgacagtttactcatctcaggcgcagcagatacctctccgctctggggaaacggc
cccggccagcgggatcatggagaaccgggggttcggtccccactcgccaaccgctgccgg
ggacttgaggggcggagcgcagagcccgccgtccgggcactaacaccagccgggaggaac
agagtacatgacgtatcttccagagttaaagctgtagaagcttggaaaccaaagacctac
atgacttctctacatgaattactgacacagctcatcggctatcgtttgtatattttttgg
cccaagaggattctgcttcttccaatgtggcccagggaagccaaaagattggatacccct
ggtttacatagtaaagaaagcactaagagaagtataagagaaaaagttctggaagacatg
ccctag

>gi568815588r:32169066_32446915|GENSCAN_predicted_peptide_8|117_aa
MREIQSVKDQKYLEELIVLRDNVKEYDILPNSKHYHVFLEQIVDPFQPLDRSSACKPGHV
KTMSIKIFFRFDLMKEVIKIQNKYSTESTPLSLNSGETFGFQIKWAGKFDARSLVVS

>gi568815588r:32169066_32446915|GENSCAN_predicted_CDS_8|354_bp
atgagagaaattcagtcagtcaaggatcagaaatatctggaagagttgattgttctacga
gacaatgtgaaagaatatgacattctgccaaattcaaagcattatcatgtttttcttgag
cagattgttgatccttttcaaccactcgatagatcctctgcatgcaaacctggccatgta
aaaacgatgtccatcaaaatattttttcgatttgatctcatgaaggaagtgataaaaatc
caaaataaatacagtactgaaagtacaccattgagtctgaattcgggggaaacctttggc
tttcaaattaagtgggctgggaaatttgatgctcggtctctagttgtgagctga

>gi568815588r:32169066_32446915|GENSCAN_predicted_peptide_9|76_aa
MRPMMASQKSRVVTSRGDRVHGKGSKRMAATGAIATLSTKELPLVDTMEHRTPPRCGDHP
PSLKKGKDTQCEDNEE

>gi568815588r:32169066_32446915|GENSCAN_predicted_CDS_9|231_bp
atgaggccaatgatggcaagtcaaaaatcaagggtggtcacgtcaagaggtgatcgtgta
catggtaaaggtagcaaacggatggctgccactggggcaatagctacccttagcactaaa
gagctccctttggttgacacaatggaacaccggactccacccaggtgtggtgaccatcct
ccaagcctgaagaagggcaaagatactcaatgtgaggacaatgaggaataa

>gi568815588r:32169066_32446915|GENSCAN_predicted_peptide_10|210_aa
MGPLKPRPRRPTPRRLGAAGVADAASVSCAPRAEEETQFGGCGDLPEGSLSQESLTERAS
HPRPHSHMKEVVIVTEIEATPETKSMDSLSPRNHKAVRRSHSLGSLDDTDEQDETKRGEK
AAEEKLEASRVWFMRFKEKSHRYNVTGQEGSVDVEATASYLKDLESAPRGHCQSLLLAPS
KAAAQTTPGPTKAMAGMAKKHYAEMQEAEF

>gi568815588r:32169066_32446915|GENSCAN_predicted_CDS_10|633_bp
atggggccgttgaagccacgtcccaggcgcccgacgccacgacgccttggcgccgccggc
gtcgctgacgctgcgagcgtgagctgcgcgccgagagcggaagaggagacgcagtttggc
ggctgtggggatttgccggaaggttctctgtctcaggaatctcttactgagagggccagc
caccccagaccacatagccacatgaaagaagtggtcatagtaacagagatagaggctaca
cctgagaccaaaagcatggactccctctcaccaaggaaccacaaggctgtgagaaggagt
cacagtcttggtagtctagatgacactgacgagcaggatgagactaagagaggtgagaaa
gctgcagaagaaaagttggaagctagtagagtttggttcatgaggtttaaggaaaaaagc
catcgctataacgtaacaggtcaagaaggaagtgttgatgtagaagctacagcaagttat
ctgaaagatctagagtcagcaccgcgtggacactgccaaagcttgctacttgcaccttcc
aaagcagcagcacaaaccacacctgggcctactaaagctatggctggcatggccaagaag
cattatgctgagatgcaggaagcggagttctga