GENSCAN 1.0	Date run:  6-Nov-116	Time: 06:34:18

Sequence gi568815597r:9004422_9229027 : 224606 bp : 49.52% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.11 Intr -    458    331  128  0  2  131  109   109 0.967  17.70
 1.10 Intr -   2964   2889   76  0  1  113   81   138 0.914  14.69
 1.09 Intr -   5823   5722  102  0  0  123   41   215 0.926  20.67
 1.08 Intr -   9214   9104  111  1  0   94  109   168 0.998  20.08
 1.07 Intr -  10447  10260  188  2  2   88   80   326 0.994  31.21
 1.06 Intr -  10821  10696  126  1  0   90   86   185 0.980  19.15
 1.05 Intr -  13954  13802  153  2  0   82   91   165 0.999  16.24
 1.04 Intr -  14912  14788  125  1  2   90   82   222 0.999  22.03
 1.03 Intr -  18682  18497  186  0  0   41   97    94 0.587   4.40
 1.02 Intr -  20653  20544  110  1  2   63   86   177 0.565  14.08
 1.01 Init -  21924  21874   51  0  0   80   98    -5 0.737   0.86
 1.00 Prom -  26971  26932   40                              -3.96

 2.15 PlyA -  28808  28803    6                               1.05
 2.14 Term -  33368  33165  204  2  0  107   41   335 0.997  28.07
 2.13 Intr -  33603  33476  128  1  2   99  109   166 0.999  20.20
 2.12 Intr -  34085  34010   76  2  1  112   62   114 0.780  10.29
 2.11 Intr -  34247  34155   93  2  0   45   52    79 0.392   0.16
 2.10 Intr -  34508  34407  102  2  0   97   94   114 0.999  13.27
 2.09 Intr -  35241  35131  111  0  0   88   78   351 0.841  34.68
 2.08 Intr -  35566  35379  188  2  2   76    6   486 0.629  38.61
 2.07 Intr -  35768  35643  126  0  0   74   92   221 0.977  21.75
 2.06 Intr -  37516  37364  153  2  0   97  101   202 0.998  22.44
 2.05 Intr -  43313  43189  125  1  2  110   97   -32 0.393   0.13
 2.04 Intr -  44849  44679  171  1  0   40   61    95 0.084   1.06
 2.03 Intr -  53187  53027  161  0  2   79  110    49 0.212   4.99
 2.02 Intr -  53829  53731   99  0  0   76   82   119 0.177  10.41
 2.01 Init -  67371  67252  120  0  0  100   51   145 0.062  10.19
 2.00 Prom -  71973  71934   40                              -2.16

 3.06 PlyA -  72226  72221    6                               1.05
 3.05 Term -  99823  99678  146  2  2   76   55    96 0.602   3.17
 3.04 Intr - 101023 100858  166  1  1   93   65   -11 0.266  -3.37
 3.03 Intr - 101259 101065  195  0  0   71   53   405 0.783  34.91
 3.02 Intr - 107068 106855  214  0  1  130   66   379 0.534  38.62
 3.01 Init - 124606 124224  383  1  2   85   94   685 0.903  64.14
 3.00 Prom - 132427 132388   40                              -3.06

 4.14 PlyA - 132475 132470    6                               1.05
 4.13 Term - 140932 140874   59  2  2  109   55    23 0.537  -1.05
 4.12 Intr - 142660 142576   85  1  1   45   82    81 0.233   2.59
 4.11 Intr - 147414 147349   66  0  0   98   68    19 0.058   0.00
 4.10 Intr - 153175 153005  171  1  0    2   74   110 0.013   1.14
 4.09 Intr - 157887 157674  214  2  1   94   71    59 0.021   3.52
 4.08 Intr - 177874 177586  289  2  1  157   97    96 0.908  13.70
 4.07 Intr - 178670 178422  249  0  0   71   34   118 0.026   2.11
 4.06 Intr - 188307 188186  122  2  2   84   75    80 0.268   6.44
 4.05 Intr - 191672 191597   76  0  1   80   81     4 0.223  -2.53
 4.04 Intr - 192600 192491  110  2  2    1  116    87 0.208   2.73
 4.03 Intr - 193128 193012  117  2  0    0  100    93 0.039   1.28
 4.02 Intr - 194571 194348  224  0  2   90    5   145 0.019   3.33
 4.01 Init - 197495 197304  192  2  0   54   76   155 0.018   9.90
 4.00 Prom - 203029 202990   40                              -2.86

 5.03 PlyA - 203828 203823    6                               1.05
 5.02 Term - 219045 218820  226  2  1 -238   50   512 0.601  11.05
 5.01 Intr - 219387 219059  329  0  2  -71   -1   851 0.919  54.80

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 117596 117671   76  1  1   89   56   100 0.866   6.20
S.002 Term + 117771 117856   86  1  2   95   47    77 0.964   2.12


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:9004422_9229027|GENSCAN_predicted_peptide_1|452_aa
MENKEAGTPPPIPSREGRLQPTLLLATLSAAFGSAFQYGYNLSVVNTPHKVGTSCGWGNV
FQVFKSFYNETYFERHATFMDGKLMLLLWSCTVSMFPLGGLLGSLLVGLLVDSCGRKGTL
LINNIFAIIPAILMGVSKVAKAFELIVFSRVVLGVCAGISYSALPMYLGELAPKNLRGMV
GTMTEVFVIVGVFLAQIFSLQAILGNPAGWPVLLALTGVPALLQLLTLPFFPESPRYSLI
QKGDEATARQALRRLRGHTDMEAELEDMRAEARAERAEGHLSVLHLCALRSLRWQLLSII
VLMAGQQLSGINAINYYADTIYTSAGVEAAHSQYVTVGSGVVNIVMTITSAVLVERLGRR
HLLLAGYGICGSACLVLTVVLLFQNRVPELSYLGIICVFAYIAGHSIGPSPVPSVVRTEI
FLQSSRRAAFMVDGAVHWLTNFIIGFLFPSIQ

>gi568815597r:9004422_9229027|GENSCAN_predicted_CDS_1|1356_bp
atggagaacaaagaggcgggaacccctccacccattccatccagggaggggcggctccag
ccgacgctgttgctggcgacactgagcgcggcctttggctcagccttccagtacggctac
aacctctctgtggtcaacacgccgcacaaggtgggcacaagctgtggatggggcaatgtt
ttccaggtcttcaagtcattttacaacgaaacctactttgagcgacacgcaacattcatg
gacgggaagctcatgctgcttctatggtcttgcaccgtctccatgtttcctctgggcggc
ctgttggggtcattgctcgtgggcctgctggttgatagctgcggcagaaaggggaccctg
ctgatcaacaacatctttgccatcatccccgccatcctgatgggagtcagcaaagtggcc
aaggcttttgagctgatcgtcttttcccgagtggtgctgggagtctgtgcaggcatctcc
tacagcgcccttcccatgtacctgggagaactggcccccaagaacctgagaggcatggtg
ggaacaatgaccgaggttttcgtcatcgttggagtcttcctagcacagatcttcagcctc
caggccatcttgggcaacccggcaggctggccggtgcttctggcgctcacaggggtgccc
gccctgctgcagctgctgaccctgcccttcttccccgaaagcccccgctactccctgatt
cagaaaggagatgaagccacagcgcgacaagctctgaggaggctgagaggccacacggac
atggaggccgagctggaggacatgcgtgcggaggcccgggccgagcgcgccgagggccac
ctgtctgtgctgcacctctgtgccctgcggtccctgcgctggcagctcctctccatcatc
gtgctcatggccggccagcagctgtcgggcatcaatgcgatcaactactatgcggacacc
atctacacatctgcgggcgtggaggccgctcactcccaatatgtaacggtgggctctggc
gtcgtcaacatagtgatgaccatcacctcggctgtccttgtggagcggctgggacggcgg
cacctcctgctggccggctacggcatctgcggctctgcctgcctggtgctgacggtggtg
ctcctattccagaacagggtccccgagctgtcctacctcggcatcatctgtgtctttgcc
tacatcgcgggacattccattgggcccagtcctgtcccctcggtggtgaggaccgagatc
ttcctgcagtcctcccggcgggcagctttcatggtggacggggcagtgcactggctcacc
aacttcatcataggcttcctgttcccatccatccag

>gi568815597r:9004422_9229027|GENSCAN_predicted_peptide_2|618_aa
MTASRHAPVPALGSLQGGSTGRALVTPWLCLRRPVTGRNRRLTLVLALATLIAAFGSSFQ
YGYNVAAVNSPALLMQQFYNETYYGRTGEFMEDFPLTLLWSVTVSMFPFGGFIGSLLVGP
LVNKFGRCAVSISGSHVWQVSQCLGMLELHSLTASSIMRVLIMRAPLREAPPEKFALLLS
GSPGKGALLFNNIFSIVPAILMGCSRVATSFELIIISRLLVGICAGVSSNVVPMYLGELA
PKNLRGALGVVPQLFITVGILVAQIFGLRNLLANVDGWPILLGLTGVPAALQLLLLPFFP
ESPRYLLIQKKDEAAAKKALQTLRGWDSVDREVAEIRQEDEAEKAAGFISVLKLFRMRSL
RWQLLSIIVLMGGQQLSGVNAIYYYADQIYLSAGVPEEHVQYVTAGTGAVNVVMTFCAVF
VVELLGRRLLLLLGFSICLIACCVLTAALALQLIAHVQLISQWLIEVALLGEEPGAILHP
PGQDTVSWMPYISIVCVISYVIGHALGPSPIPALLITEIFLQSSRPSAFMVGGSVHWLSN
FTVGLIFPFIQEGLGPYSFIVFAVICLLTTIYIFLIVPETKAKTFIEINQIFTKMNKVSE
VYPEKEELKELPPVTSEQ

>gi568815597r:9004422_9229027|GENSCAN_predicted_CDS_2|1857_bp
atgacggcctcccgccacgcccccgtccccgcgctcggctccctccagggcggaagcacg
ggtcgagcgttggtgacgccatggctgtgcttgcgacgccctgtcactggcaggaaccgg
aggctgacgcttgtgcttgccctggcaaccctgatagctgcctttgggtcatccttccag
tatgggtacaacgtggctgctgtcaactccccagcactgctcatgcaacaattttacaat
gagacttactatggtaggaccggtgaattcatggaagacttccccttgacgttgctgtgg
tctgtaaccgtgtccatgtttccatttggagggtttatcggatccctcctggtcggcccc
ttggtgaataaatttggcaggtgtgctgttagtataagcggctctcacgtgtggcaagtt
tctcagtgtttaggaatgctggagctccactcgctgacagcttcgtccatcatgagggtc
ctcatcatgagggctccattgcgagaggcccctccagagaagtttgctttgcttctgtca
ggatctccaggaaaaggggccttgctgttcaacaacatattttctatcgtgcctgcgatc
ttaatgggatgcagcagagtcgccacatcatttgagcttatcattatttccagacttttg
gtgggaatatgtgcaggtgtatcttccaacgtggtccccatgtacttaggggagctggcc
cctaaaaacctgcggggggctctcggggtggtgccccagctcttcatcactgttggcatc
cttgtggcccagatctttggtcttcggaatctccttgcaaacgtagatggctggccgatc
ctgctggggctgaccggggtccccgcggcgctgcagctccttctgctgcccttcttcccc
gagagccccaggtacctgctgattcagaagaaagacgaagcggccgccaagaaagcccta
cagacgctgcgcggctgggactctgtggacagggaggtggccgagatccggcaggaggat
gaggcagagaaggccgcgggcttcatctccgtgctgaagctgttccggatgcgctcgctg
cgctggcagctgctgtccatcatcgtcctcatgggcggccagcagctgtcgggcgtcaac
gctatctactactacgcggaccagatctacctgagcgccggcgtgccggaggagcacgtg
cagtacgtgacggccggcaccggggccgtgaacgtggtcatgaccttctgcgccgtgttc
gtggtggagctcctgggtcggaggctgctgctgctgctgggcttctccatctgcctcata
gcctgctgcgtgctcactgcagctctggcactgcagctcatagcccacgttcagctgatt
tcccagtggctcatcgaggtggcactgctgggggaggagccaggtgccatcctccaccca
ccagggcaggacacagtgtcctggatgccatacatcagcatcgtctgtgtcatctcctac
gtcataggacatgccctcgggcccagtcccatacccgcgctgctcatcactgagatcttc
ctgcagtcctctcggccatctgccttcatggtggggggcagtgtgcactggctctccaac
ttcaccgtgggcttgatcttcccgttcatccaggagggcctcggcccgtacagcttcatt
gtcttcgccgtgatctgcctcctcaccaccatctacatcttcttgattgtcccggagacc
aaggccaagacgttcatagagatcaaccagattttcaccaagatgaataaggtgtctgaa
gtgtacccggaaaaggaggaactgaaagagcttccacctgtcacttcggaacagtga

>gi568815597r:9004422_9229027|GENSCAN_predicted_peptide_3|367_aa
MQPSPPPTELVPSERAVVLLSCALSALGSGLLVATHALWPDLRSRARRLLLFLSLADLLS
AASYFYGVLQNFAGPSWDCVLQGALSTFANTSSFFWTVAIALYLYLSIVRAARGPRTDRL
LWAFHVVSWGVPLVITVAAVALKKIGYDASDVSVGWCWIDLEAKDHVLWMLLTGKLWEML
AYVLLPLLYLLVRKHINRAHTALSEYRPILSQEHRLLRHSSMADKKLVLIPLIFIGLRVW
STVRFVLTLCGSPAVQTPVLVVLHRRHSLIPSRSTVAAPQCRPRHSCREELGPTVLCLPL
CLRQDLEERRQSGISVVRGDPQAASSTGTSVLAHGWAFICIRVAVRFGKPVAHSCGHSAP
TQWTLMS

>gi568815597r:9004422_9229027|GENSCAN_predicted_CDS_3|1104_bp
atgcagccgtccccgccgcccaccgagctggtgccgtcggagcgcgccgtggtgctgctg
tcgtgcgcactctccgcgctcggctcgggcctgctggtggccacgcacgccctgtggccc
gacctgcgcagccgggcacggcgcctgctgctcttcctgtcgctggccgacctgctctcg
gccgcctcctacttctacggagtgctgcagaacttcgcgggcccgtcgtgggactgcgtg
ctgcagggcgcgctgtccaccttcgccaacaccagctccttcttctggaccgtggccatt
gcgctctacttgtacctcagcatcgtccgcgccgcgcgcgggcctcgcacagatcgcctg
ctttgggccttccatgtcgtcagctggggggtcccgttggtcatcactgtggcagccgtc
gccctgaagaagattggctatgacgcctcggacgtgtctgtgggctggtgctggatcgac
ctggaggccaaggaccatgtcctgtggatgctgctgacggggaagctgtgggagatgctg
gcatatgtgctgctgcctctgctgtacctcctggtccggaagcacatcaacagagcgcac
acggcactctctgagtaccggcccatcctctcccaggagcaccgcctgctgcgccactcc
tccatggcggacaagaagctggtgctcatcccgctcatcttcatcggcctcagggtctgg
agcaccgtgcggttcgtgctgaccctctgtggctccccggccgtgcagacgccggtgctg
gtggttctgcataggaggcacagcctgattccttcccgcagcacagtggctgcaccccag
tgtcggccaaggcacagctgcagggaggagctcggccccactgtgctgtgccttcctctc
tgcctgagacaggaccttgaagagagaaggcagagtgggatcagtgtggtccggggtgat
cctcaggcagcaagttccaccggtaccagcgtcctggcccacgggtgggcgttcatctgc
ataagggtagcagtgagattcgggaagccggtggcccacagctgtggccacagtgccccc
acccagtggaccttgatgtcctga

>gi568815597r:9004422_9229027|GENSCAN_predicted_peptide_4|657_aa
MPYCEIFLLQVTADRSSGRGSSGRGSSRRSQLEEEEEEEEEEEEEGEEEGRREGGREGDA
AHSQGQLEPKLQQALPRPPRPPARLPAARAKSAVLSAAGLQQQPAMRRPCTTAPGGARVP
TATSWRLRAAGAEIQTDARHSIAAASLPDKDKTCTFQAEPTGQLRSCDSCRDEGIRKRTQ
EAQGRPGIPWDMWDTDEIISAQPIRHPDSDAVGQAFPFGIYLCVLVRDLLFTVSVHFCVQ
KTWVMLSAQLTTVKGVMAANMYKNVAMSVRRIEGLVPVWQAPRDPRAVRGRASCPEARRA
KSPLQPAAPELGGAVSGGRAPGRRAVAVAGCRFLALEVLSHLVESGAALALRALRTGNVA
ETTGGGDAAVPSVWGQPSSPDPGLERRVAAPGPGGTSRKEDPAAGSAWACLGLFRAGLLL
GDHADRGHLEILRESCSQAPGQERPGSLHYLLAPSQHAPSFRFEIPVTPREMLQCLSGWG
AGHMVGAERGGHLCACTSWQVNAHLWRGLGAGSEPRSLRLCQAQRRQRAQQASPTHKDHW
DIVTCEGSARVRCALGAVGEMGAEDEVMTPHTRNLMFAVMVEACPWWGVLGRGRTGLSPE
SPPDAVDRPAQHYQVQSRGPPPRCLPFPGQDDPNFLMESAELASWVCSLDGHTGPGA

>gi568815597r:9004422_9229027|GENSCAN_predicted_CDS_4|1974_bp
atgccgtactgcgaaatctttctccttcaagtgactgcagaccgcagcagcggcagaggc
agcagcggcagaggcagcagcagaaggagtcagctggaggaggaggaggaggaggaggag
gaggaggaggaggaaggagaggaggagggaaggagggaaggagggagggaaggggatgca
gcccattctcaggggcagttagaacccaagctgcagcaggccctcccccgccctccccgc
ccgcctgcccgcctgcccgccgcccgggccaagtcagcagtgctgagcgctgcggggctg
cagcagcagccggcgatgcggagaccctgcaccactgctccgggcggcgctcgcgtcccg
acggccacctcctggcggctgcgcgcagccggcgccgagatccagacggacgcacggcac
agcattgcggctgccagtctccctgacaaggacaagacctgcaccttccaggcagagcca
actggccagctgaggtcctgcgactcctgcagggatgaaggtataaggaaaaggacacag
gaagctcagggcagacctgggattccctgggacatgtgggacacggatgagatcatcagc
gctcaacccatcaggcatcctgactcagatgcagtaggacaagcctttccctttgggatc
tatctctgtgtccttgttcgggacttgctgttcacagtctcagtgcacttttgtgtccaa
aagacatgggtgatgctgagtgcacagcttactacagtgaaaggagtgatggctgcaaac
atgtacaaaaatgtggccatgtctgtcagaaggatcgagggcttagtgccggtgtggcaa
gccccccgggacccgagagccgtgcggggccgagcctcgtgccccgaggcacgccgagcc
aagtcacccctgcagcccgcggcgccggaacttgggggcgcagtgagtgggggcagggcg
ccgggccggcgggcggtggccgtggctgggtgccggttcctggctttagaagtcctttcg
catcttgttgaatccggggctgcattggccctccgagctctccggactggcaacgtcgca
gagacaacaggtggaggagatgccgctgtcccgtcggtctggggacagcccagctccccg
gatcccgggctggagagacgcgtcgcggccccggggcctggtggcacgagcaggaaggag
gacccggcggcgggctctgcctgggcttgcctgggcttgttccgagccgggctgcttctc
ggtgaccacgcagatcgggggcatttggagattttgcgggagtcctgcagccaagctccg
gggcaggagaggcctggaagcctgcactacctgctcgccccgtcccagcatgcacccagc
ttcaggtttgaaattccagtgacaccgagggagatgctccagtgcctgtccggctggggg
gcaggtcacatggtgggagcagagaggggagggcacttgtgcgcctgcacctcttggcag
gtgaatgcacacctatggaggggcctgggtgctggcagcgagccccgctccctgcggctg
tgccaggcccagaggcggcagcgagcccaacaggcctctccaacacataaagatcattgg
gacatagtcacgtgtgaagggtctgcccgtgtccgctgtgcattaggtgctgttggggaa
atgggagcagaggatgaggtcatgaccccacacacccgcaacctgatgtttgctgtcatg
gtggaagcatgcccgtggtggggggtgctggggagaggcaggacaggcctgtcccccgag
tcccctccggatgccgtggaccggccagctcagcactaccaggtacagtccaggggcccc
ccaccaagatgcctgcccttccctggtcaagatgaccccaacttcctgatggaatcagca
gagctggcttcatgggtgtgcagcctggatggccacacagggcccggtgcctga

>gi568815597r:9004422_9229027|GENSCAN_predicted_peptide_5|184_aa
KKKKKRRKRKRKKRKRRKKKKKKRKKKKKKKSKKKTKKKKKEEKDEEVEEEKDEEEEEEE
EKDKEEVEEKDEEEEKKKEEEEKDEEEEVEEKDEEEDEKKKKKKRTKKKKRRRRRKEEEE
GRRRKGRRRRKRRRRRRRKKKKTKKKEEEKDKEEVEEKDEEEEDEEDDEEEDKDKEEEEE
EGHT

>gi568815597r:9004422_9229027|GENSCAN_predicted_CDS_5|555_bp
aagaagaagaagaagagaaggaagaggaagagaaagaagaggaagaggaggaagaagaag
aaaaagaagaggaagaagaagaagaagaaaaagtcaaagaagaagacaaagaagaagaag
aaagaagaaaaagatgaagaagtagaagaagaaaaagatgaagaagaagaagaagaagaa
gaaaaggacaaagaagaagtagaagaaaaagatgaagaagaagaaaagaagaaggaagaa
gaagaaaaggatgaagaagaagaagtagaagaaaaagatgaagaagaagatgaaaagaag
aagaagaagaaaaggacgaagaagaagaaacgaagaagaagaagaaaagaagaagaagaa
ggaagaagaagaaaaggacgacgaagaagaaaaagaagaagaagaagaagaaggaagaag
aaaaagacgaagaagaaggaagaagaaaaagacaaagaagaagtagaagaaaaagatgaa
gaagaagaagatgaagaagatgacgaagaagaagacaaagacaaagaagaagaagaagaa
gaaggccacacctag