GENSCAN 1.0	Date run:  6-Nov-116	Time: 07:40:37

Sequence gi568815596r:43124322_43326315 : 201994 bp : 49.23% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   2673   2807  135  2  0   53   68    73 0.318   2.56
 1.02 Intr +   3660   3718   59  2  2   71   66    38 0.213  -2.42
 1.03 Intr +   6733   6806   74  1  2   82   71    95 0.540   6.25
 1.04 Intr +  30484  30664  181  2  1   56   49    80 0.072  -0.17
 1.05 Intr +  33954  34105  152  0  2  113   35    42 0.192   1.21
 1.06 Intr +  37751  37874  124  0  1   33   60   107 0.297   2.04
 1.07 Intr +  39041  39169  129  2  0  108   80     7 0.242   1.71
 1.08 Intr +  60086  60197  112  2  1   89  105     4 0.477   2.58
 1.09 Intr +  61835  61985  151  1  1   81   27    79 0.409   0.84
 1.10 Intr +  63977  64128  152  0  2   88  116   -11 0.322   1.58
 1.11 Intr +  65051  65137   87  1  0  109   90    -7 0.232   1.77
 1.12 Intr +  70862  70945   84  1  0   57  106    35 0.064   2.22
 1.13 Intr +  77235  77437  203  2  2   14   37   144 0.006  -0.02
 1.14 Intr +  90153  90311  159  0  0   58   77    55 0.007   0.50
 1.15 Intr +  93636  93768  133  0  1   95   59    22 0.073   0.65
 1.16 Intr +  94311  94391   81  2  0   84  105    18 0.439   2.93
 1.17 Intr +  95438  95639  202  1  1  141  121    79 0.830  15.36
 1.18 Intr +  96932  97047  116  0  2   58   68    92 0.719   4.37
 1.19 Term +  97467  97484   18  2  0   79   47     4 0.371  -6.28
 1.20 PlyA +  97708  97713    6                              -0.45

 2.16 PlyA -  98106  98101    6                               1.05
 2.15 Term - 101431  99998 1434  1  0   92   54  2326 0.987 220.47
 2.14 Intr - 101841 101639  203  1  2  110   64    24 0.378   1.20
 2.13 Intr - 102982 101944 1039  1  1   48  102   234 0.202  10.87
 2.12 Intr - 107558 107505   54  2  0   72  115    54 0.773   5.68
 2.11 Intr - 108561 108392  170  1  2  112   58   179 0.906  16.97
 2.10 Intr - 119394 119248  147  1  0  103   78    26 0.002   3.31
 2.09 Intr - 144594 144449  146  2  2   87   77    30 0.791   1.73
 2.08 Intr - 144761 144705   57  1  0  142   77     2 0.830   2.50
 2.07 Intr - 145238 145110  129  1  0   22   81   158 0.325   8.31
 2.06 Intr - 145933 145909   25  2  1   32   94    21 0.180  -5.82
 2.05 Intr - 155575 155444  132  2  0   81   82    89 0.968   8.22
 2.04 Intr - 162740 162587  154  2  1   75  111    99 0.998  10.55
 2.03 Intr - 168892 168513  380  2  2   77   98   170 0.523  11.58
 2.02 Intr - 182127 181936  192  1  0   42   99   110 0.008   6.96
 2.01 Intr - 196219 196125   95  0  2  104   80    15 0.013   1.91

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 115627 115720   94  0  1   79   78    94 0.952   8.04
S.002 Init - 182056 181936  121  1  1   77   99    80 0.941   8.35


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:43124322_43326315|GENSCAN_predicted_peptide_1|783_aa
SMWDGSGVGAALIKGWLLDLELTTGSLAGLRPSAEGFQQVPQSRMVLASHQNSGCRMDAL
CCPSRICQAAGYSAEKEKTEAVVMSPKELKLPPLHIPGPGSREANACLALCPEMHIPARY
DPAAVTTASPDVESPPDVLTIAAVPRMGLGTAPHHWAKRMTRHSAGDDLLLLGRPFSSSS
SPILTQRPVSCHCPRGLADLAPSSNAPALEPDKVRPPYQGHGPRFSSLARRDKGYGPYQP
RRTHQQLGRTQQGSAQAGTQTHLGGTDVSEFYPSFISPRPHNLMRKGLLTSLGSRPLPLT
SEWAATSSWFTYREWLRTPVTEFWVCNDEADVDTRVEGFDVNQRTKWKPSIWGPPEAAIY
RKGFVVIFKNRYGPSPKQNSEPSPLGCSVSCMNLALISPSVPILDGVPGPRVFRIFTSCV
SIKEASLNMPVKNTFSAVRWFTPIITTLWEAEKNGIIYSNNNSIDMLSFLFVGKPQMTVW
LRLQPTPSCCPLDWQPLNPLPSKCPPSHQFNWLPVQLQKRPNLSVEPKQEAGEKGANGQG
PLRLLQEVPCSGSGPTGLLLASSCLSAPQTLWAPSEKPAGWNIQGPAMLSLSAKKDLGLL
WLLVVQGKQTAGFQLPRSPFSSGAGLRLPACKQSPHQQAVTTGAESEFFLKMSLQTASGT
KACPWQVCPATEGSSWGGLSSCQAPPRHSPRCPPPSLSRASSGTELELPWTATALHIPQE
CGQEKINTIRVHDNGPLMEASNKHQNAPVNTSAIIVNVKQLPEAWRIHQTAPSPPCSARK
LSA

>gi568815596r:43124322_43326315|GENSCAN_predicted_CDS_1|2352_bp
tccatgtgggatgggagcggggtgggggcagccctaatcaagggatggctgctggacttg
gagctgaccactggctccctggcaggccttagaccttccgcagaaggatttcagcaggtt
cctcagagcagaatggtcctagcaagtcatcaaaacagcgggtgccgcatggacgccctg
tgctgcccttcacggatatgccaggctgcaggctacagtgccgagaaggagaagacggag
gcggtggtgatgtcacccaaggaattaaaactcccacccctgcacatccccgggccaggc
tccagggaagccaacgcctgcttggccttgtgcccagagatgcacattccagccaggtat
gatcctgctgctgttactactgcaagcccagatgtggaatcacctccagatgttctcacc
atagcagctgtgcctaggatgggattgggcactgctccccatcactgggctaaacgaatg
acccgccactcagcaggtgacgacttactcctccttggccggcccttcagctcctcctcc
tcacccatcctgactcagaggcctgtcagctgccactgcccccgaggcctggcagatttg
gcacccagcagcaatgccccggctctggaacctgacaaagtgagacctccctaccagggc
catggcccccgcttctccagcctcgctcgccgggacaaaggttacgggccttatcaacca
aggaggacccaccagcagcttggacgcacccaacaaggctctgcccaggctggaactcag
acacatctgggaggcacagatgtgtctgagttttatccaagctttatctcaccaaggccc
cataacctcatgaggaaaggactcctgacctcattaggctcgcgccccctcccgctgacc
tccgaatgggctgctacaagttcatggttcacctacagggagtggctgcgcacaccagtc
actgagttctgggtatgcaatgatgaagcagatgtggacaccagggtggagggttttgat
gtcaaccaaaggaccaaatggaagccttccatttggggtcctccagaagctgctatttac
agaaaaggctttgttgtcatttttaaaaacagatatggcccatcacccaaacaaaactca
gagccttctcccctggggtgctctgtttcctgcatgaatcttgctctcatctccccgtcc
gtgcccatcctagatggggtgccagggccaagggtctttaggattttcacctcctgtgtc
agcatcaaggaagcttccctgaacatgccagtcaagaacacattctcggccgtgcggtgg
ttcacacctataatcacaacgctttgggaggctgagaaaaatggaattatttattcaaat
aataactctattgatatgctctcattcctgtttgtggggaagccccagatgactgtgtgg
ctgaggctccaaccaacccccagctgctgccccctggactggcagcccctcaacccactc
cccagcaagtgtcctccctctcaccagttcaactggctcccagttcagctgcagaaacgg
ccaaacctctctgtggaacccaaacaggaagctggggagaagggagccaacggccaagga
cctttgaggctcctccaggaagtcccctgcagcggctctggacctacagggctattgttg
gcaagctcctgcctgtcagccccacagactctctgggccccctctgagaagcctgctgga
tggaacatccagggaccagccatgctgagcctctcagccaagaaggatttgggtttgctt
tggttattagtggtgcaggggaaacaaacagcaggtttccaattaccccgcagccccttc
tcaagtggtgcaggactcagactgcccgcctgcaagcagtcaccacaccagcaagcagtc
accacgggagcggagagtgaattctttctaaaaatgtccctgcagacagccagcggcacc
aaggcctgtccttggcaggtgtgcccagcaacagagggctcctcctggggaggcctgtcc
agctgccaggccccgccccgccacagcccccgctgtcctcctccctccctcagccgtgcc
agcagcggcacagaactggaattgccctggacggccacagctctgcatatcccccaggag
tgtggacaagaaaaaataaacacaattagagttcacgacaatgggcccctgatggaagca
agcaacaagcaccaaaacgctccagttaacaccagtgcaatcatcgttaacgtgaaacag
ctgcccgaggcctggcgtatccaccagaccgccccctcccctccatgctcagctaggaag
ttgtccgcataa

>gi568815596r:43124322_43326315|GENSCAN_predicted_peptide_2|1452_aa
XQNPCLVTRAVYIDILFLLTCCLNRSAKDNQPVSHGLSVEEKPQVLCELEFKLNRVMVDK
FLIPNPVLRTNSPKEPEVGRAQYLTPVVPTLWEAKAVLESLGFWEEVRGIISGSELITGF
PWAFKVPGLPQYLQSLTRLAIAAVWAAAAKSGERETNVPISFSQLLESAFPEVRSLTLEA
LLEKFLAAASGLGEKGVPPLLCNMGEKFLLLAMKENHPECFCKNRELIAAELKQWVQLVI
LSCEDHLPTESRLAVVEVLTSTTPLFLTNPHPILELQDTLALWKCVLTLLQSEEQAVRDA
ATETVTTAMSQENTCQSTDVETEAQEREPGPPDVHLHLSECVTGSGSHDVQKQVQTNAPV
FDLLASYECQNFRFPQQGHITMQDFSSLCEDDSSSPSFRPDSIGSIPPEHPSQHWHLPFA
LLSSLSHRLLPSQQPDEDLESHFPLKTERALRQVVPGKGLLLICGHLSAQELVRKGELGD
AFQNKGEFAFCQVDASIALALALAVLCDLLQQWDQLAPGLPILLGWLLGESDDLVACVES
MHQQAKGSKRIVPLYEKFGDMAPALKPCLLSLGGEGAEKRARAPPARLPRRPPAWPPPPP
PRLHVQSGWSRHRLDAGPEPPPPGRGTLCKPAGPRGWLRYSGILQFPRPVQNRRWELKAP
QVRLGEQGRERHVQGCRIPATLNVPGLSDRAAPEENSRAFPPPPGGIHWGRELHATPAAR
AAGPARRPPAPSPGGKKLAAANGRPGRRLTSASGRAALPGDPGGGRVLSPPPARPPRRSR
TPGLYIGRALGGRRVPAVRELPSAPRGGRAGHPGARRSAPRFSPSPLPHSAGPSRRPAPL
HSPSPLAPRQTFGPSPPLARYSSWLKPGHAAPRAPPDLPACRSGHCGIQKHVDHTSVRLL
RCRLLVQGRESPGVCKRVSERPGGGEGGKEGAGVAVEFLHCRPRPRCPGLPGQASRRPPR
QPGRRITCRNPARPTTEKSLANLNLNNMLDKKAVGTPVAAAPSSGFAPGFLRRHSASNLH
ALAHPAPSPGSCSPKFPGAANGSSCGSAAAGGPTSYGTLKEPSGGGGTALLNKENKFRDR
SFSENGDRSQHLLHLQQQQKGGGGSQINSTRYKTELCRPFEESGTCKYGEKCQFAHGFHE
LRSLTRHPKYKTELCRTFHTIGFCPYGPRCHFIHNADERRPAPSGGASGDLRAFGTRDAL
HLGFPREPRPKLHHSLSFSGFPSGHHQPPGGLESPLLLDSPTSRTPPPPSCSSASSCSSS
ASSCSSASAASTPSGAPTCCASAAAAAAAALLYGTGGAEDLLAPGAPCAACSSASCANNA
FAFGPELSSLITPLAIQTHNFAAVAAAAYYRSQQQQQQQGLAPPAQPPAPPSATLPAGAA
APPSPPFSFQLPRRLSDSPVFDAPPSPPDSLSDRDSYLSGSLSSGSLSGSESPSLDPGRR
LPIFSRLSISDD

>gi568815596r:43124322_43326315|GENSCAN_predicted_CDS_2|4359_bp
nngcaaaatccatgtttggtgaccagagctgtatatattgatattctcttcctattgact
tgctgcctcaacagatctgcaaaggacaaccagccagtatcccatggactaagtgtggaa
gagaagccccaggtcctttgtgagttagagtttaaattaaacagggtcatggtggacaaa
tttctgattcccaatcctgttcttcggaccaattcgccgaaagaaccagaagtaggccga
gcgcagtacctcacacctgtagtaccaacactttgggaggccaaggcagttctggagagt
cttggcttctgggaggaagtcagagggattatctcaggatcagagctgataacgggattc
ccttgggccttcaaggtgccaggcctgccccagtacctccagagcctcaccagactagcc
attgctgcagtgtgggccgcggcagccaagagtggagagcgggagacgaatgtccccatc
tctttctctcagctgttagaatctgccttccctgaagtgcgctcactaacactggaagcc
ctcttggaaaagttcttagcagcagcctctggacttggagagaagggcgtgccacccttg
ctgtgcaacatgggagagaagttcttattgttggccatgaaggaaaatcacccagaatgc
ttctgcaagaacagggaattgatagctgctgagctgaagcagtgggttcagctggtcatc
ttgtcatgtgaagaccatcttcctacagagtctaggctggccgtcgttgaagtcctcacc
agtactacaccacttttcctcaccaacccccatcctattcttgagttgcaggatacactt
gctctctggaagtgtgtccttacccttctgcagagtgaggagcaagctgttagagatgca
gccacggaaaccgtgacaactgccatgtcacaagaaaatacctgccagtcaacagatgtg
gaaactgaagcccaagaaagagagcctgggccccctgacgttcacctgcatctcagcgag
tgcgtcactggcagcggctcccatgatgtgcaaaagcaggtgcaaactaatgctcccgtc
ttcgatctgctggccagttatgagtgccagaactttcgctttcctcagcaaggccatatc
acaatgcaggatttctcttcactgtgtgaggatgactcctccagccccagcttcaggcct
gactctattgggagcatccctcctgagcaccccagccagcactggcacctgccctttgcc
ctcctgagttcactcagccacagacttcttccatcccaacagccagatgaagacctggaa
tcacattttcccctcaagacagaaagggctctgcggcaggttgtgcctgggaaggggctg
cttctcatttgtggccacctctctgcccaggagctggtgaggaagggtgaactaggggat
gcctttcagaacaaaggagagtttgccttctgccaggtggatgcctccatcgctctggcc
ctggccctggccgtcctgtgtgatctgctccagcagtgggaccagttggcccctggactg
cccatcctgctgggatggctgttgggagagagtgatgacctcgtggcctgtgtggagagc
atgcatcagcaggccaagggttcaaaacgcattgtccctctttatgagaaatttggagac
atggccccggcgctcaagccctgtttactgagcctgggcggggagggggcggagaaacga
gcccgggctccaccggcaagactgccgcggcggccgcccgcgtggccacccccaccccca
ccgcgactccacgtgcagtcgggctggagccgccaccgactggacgcaggccccgagccc
ccgcctcctggccggggcaccctttgcaaacccgccgggccgcggggatggttgcgatat
tctggcattttgcaattcccgcgcccagtacaaaaccgaaggtgggagcttaaagctcca
caggtccgcctcggagaacagggcagggaaagacacgtccagggctgcagaatcccggcc
acgctaaacgtaccggggctctccgaccgcgcagccccggaggagaacagccgtgccttc
ccgccgccacccggcggcatccactggggccgagagctacacgccacaccggccgcccgg
gccgccggccccgcccggaggcctccagcaccctcccccggaggaaaaaaattggcggcg
gccaatgggaggccgggaaggcgcctgacgtccgcgagcgggcgggcggcgttgcctgga
gaccccggcgggggccgagttctgtcccctcccccggcgcgcccgccccgccgcagccgc
actcccgggctctatatagggcgcgcgctcggaggccgccgagttccagcagtccgcgag
ctgccgtcggctccgcggggggggcgggccgggcaccccggggcgcggaggagcgctcct
cgcttctctccttcccccctgccgcactccgccggaccctcccgccggcccgcgccgctg
cactcgccctctcctctcgccccccggcaaactttcggcccctccccgcccctcgcccgt
tattcgtcgtggctcaagcccggccacgccgccccaagggctcctcccgacctcccggcc
tgccgctccggccactgcgggatccagaaacatgtcgaccacacttctgtccgccttcta
cgatgtcgacttcttgtgcaaggtcgggaaagtcccggggtttgcaaaagagtgtccgag
cgccctggaggcggggagggcggcaaggagggcgccggtgtcgcggttgagtttctccac
tgccgaccgcggccacgctgcccggggcttcccggacaggcttcgcgccgcccacctcgg
cagccggggcggaggatcacgtgtcgaaacccagcgcggcccacgacagagaaatccctg
gccaacctcaacctgaacaacatgctggacaagaaggcggtggggacgcctgtggccgcc
gcccccagctcgggcttcgcgccgggattcctccgacggcactcggccagcaacctgcat
gcactcgcccaccccgcgcccagccccggcagctgctcgcccaagttcccgggcgccgct
aacggcagcagctgcggcagcgcggcggccggcggtccgacctcctacggcacccttaag
gagccgtcggggggcggcggcacagccctgctcaacaaggagaacaaattccgggaccgc
tcgtttagcgagaacggcgatcgcagccagcacctcctgcacctgcagcagcagcagaag
gggggcggcggctcccagatcaactccacgcgctacaagaccgagctgtgccggcccttc
gaggagagcggcacgtgcaagtacggcgaaaagtgccagttcgcgcatggcttccacgag
ctgcgcagcctgactcgccatccgaagtacaagaccgagctgtgccgcacctttcatacc
atcggcttctgcccctatgggccgcgctgccacttcatccacaacgcggacgagcggcgg
cccgcgccgtcggggggcgcctccggggacctgcgtgcctttggcacgcgcgatgcgttg
cacctgggcttcccgcgggagccgcggcccaagttgcaccacagcctcagcttctcgggc
ttcccgtcgggccaccatcagcccccgggcggcctcgagtcgccgctgctgctcgacagc
cccacgtcgcgcacgccgccgccgccctcctgctcttcggcctcgtcctgctcctcctcc
gcctcctcctgttcctcggcctccgcggcctccacgccctcgggcgccccgacatgctgc
gcctccgcggcggccgcggctgcggccgctctgctgtacggcaccgggggcgccgaggac
ctgctggcgccgggggccccgtgcgcggcctgctcgtcggcctcgtgcgccaacaacgcc
ttcgccttcggtccggagctcagcagcctcatcacgccgctcgccatccagacccacaac
tttgccgccgtggccgccgccgcctactaccgcagtcagcagcagcagcagcagcagggc
ctggcgccccccgcgcagccgccggcgccgcccagcgcgaccctccccgccggggccgcc
gcacctccctcgccgcccttcagcttccagctgccgcgccgcctgtccgactcgcccgtg
ttcgacgcgccccccagccccccggactcgctgtcggaccgcgacagctacctaagcggc
tccctgagctccggcagcctcagcggctctgagtctcccagcctcgaccctggccgccgc
ctgccaatcttcagccgcctctccatctccgacgactga