GENSCAN 1.0	Date run:  3-Nov-116	Time: 07:42:16

Sequence gi568815590f:97676010_97951471 : 275462 bp : 44.09% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  10659  10743   85  2  1   62   75    50 0.129   0.49
 1.02 Intr +  11420  11596  177  0  0   31   71   111 0.212   3.59
 1.03 Intr +  14943  15029   87  1  0   80   94    61 0.837   5.84
 1.04 Intr +  23745  23843   99  1  0   77   44    68 0.520   1.38
 1.05 Intr +  30617  30741  125  0  2   50  113    41 0.910   3.10
 1.06 Intr +  37653  37760  108  2  0   60   98    90 0.991   7.68
 1.07 Intr +  43040  43180  141  1  0   79   91    68 0.978   6.75
 1.08 Term +  82853  82945   93  1  0   62   36    86 0.067  -1.37
 1.09 PlyA +  83812  83817    6                               1.05

 2.00 Prom +  94447  94486   40                              -2.46
 2.01 Init +  99728 100099  372  1  0   97   93   267 0.978  23.06
 2.02 Intr + 129344 129455  112  1  1  123  100    43 0.671   8.95
 2.03 Intr + 139319 139392   74  0  2   46  121    23 0.076   0.53
 2.04 Intr + 140049 140171  123  2  0   73   92    23 0.516   1.98
 2.05 Intr + 143131 143229   99  0  0   88  121   -34 0.518   0.21
 2.06 Intr + 149049 149144   96  2  0   89   90    68 0.827   7.31
 2.07 Intr + 173844 173960  117  2  0   98   60   119 0.958  10.76
 2.08 Term + 175388 175465   78  1  0  142   46   120 0.999  10.96
 2.09 PlyA + 175824 175829    6                               1.05

 3.00 Prom + 186684 186723   40                              -5.66
 3.01 Init + 189045 189416  372  2  0   72    2   235 0.348  10.26
 3.02 Intr + 192290 192394  105  1  0   48  100    64 0.676   4.01
 3.03 Term + 193263 193631  369  2  0   72   53   100 0.262  -0.45
 3.04 PlyA + 196062 196067    6                               1.05

 4.00 Prom + 199430 199469   40                              -4.26
 4.01 Init + 212092 212233  142  0  1   53   92   156 0.526  10.80
 4.02 Intr + 254944 255513  570  2  0  117   92   897 0.978  85.73
 4.03 Intr + 265768 265890  123  2  0  129   63   123 0.983  14.46
 4.04 Term + 270131 270150   20  0  2  108   45     9 0.345  -2.92
 4.05 PlyA + 271388 271393    6                               1.05

 5.02 PlyA - 274142 274137    6                               1.05
 5.01 Term - 275246 275131  116  0  2  105   43    70 0.670   2.93

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 139321 139392   72  0  0   79  121    22 0.839   5.73


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590f:97676010_97951471|GENSCAN_predicted_peptide_1|304_aa
SKKNKKKSKSDAKAVQNSSRHDGKEVDEGAWETKISHREKRQQRKRDKVLTDSGSLDSTI
PGIENTITVTTEQLTTASFPVGSKKNKVSSGLNENLTVNGGGWNEKSVKLSSQISAGSTA
EPVSQSTTSDYQWDVSRNQPYIDDEWSGLNGLSSADPNSDWNAPAEEWGNWVDEERASLL
KSQEPIPDDQKVSDDDKEKGEGALPTGKSKKKKKKKKKQGEDNSTAQDTEELEKEIREDL
PVNTSKTRPKQEKAFSLKTISTSDPAEVLVKNSQLTTILISTILPADTANFSSIALLRTI
CTSL

>gi568815590f:97676010_97951471|GENSCAN_predicted_CDS_1|915_bp
tcaaagaaaaataagaagaaatcaaagtcagatgctaaagcagtgcaaaacagttcacgc
catgatggaaaggaagttgatgaaggagcctgggaaactaaaattagtcacagagagaaa
cgacagcagcgtaaacgtgataaggtgctgactgattctggttcattggattcaactatc
cctgggatagaaaataccatcacagttaccaccgagcaacttacaaccgcatcatttcct
gttggttccaagaagaataaagtttcttcaggattgaatgaaaacctcactgtcaatgga
ggaggctggaatgaaaagtctgtaaaactctcctcacagatcagtgcagggtctactgct
gagccagtttctcagtctaccacttctgattatcagtgggatgttagccgtaatcaaccc
tatatcgatgatgaatggtctgggttaaatggtctgtcttctgctgatcccaactctgat
tggaatgcaccagcagaagagtggggcaattgggtagacgaagaaagagcttcacttcta
aagtcccaggaaccaattcctgatgatcaaaaggtctcagatgatgataaagaaaaggga
gagggagctcttccaactgggaaatccaaaaagaaaaaaaagaaaaagaagaagcaaggt
gaagataactctactgcacaggacacagaagaattagaaaaagagattagagaagacctt
ccagtgaatacctctaaaacccgtccaaaacaggaaaaagctttttccttgaagaccata
agcactagtgatccagccgaagtactcgtcaaaaatagccagctgacaaccattctcata
tcaaccatcttacctgctgatactgccaatttcagcagcatcgccctcttaaggactatt
tgtacaagcctttaa

>gi568815590f:97676010_97951471|GENSCAN_predicted_peptide_2|356_aa
MTSRTRVTWPSPPRPLPVPAAAAVAFGAKGTDPAEARSSRGIEEAGPRAHGRAGREPERR
RSRQQRRGGLQARRSTLLKTCARARATAPGAMKMVAPWTRFYSNSCCLCCHVRTGTILLG
VWYLIINAVVLLILLSALADPDQYNFSSSELGGDFEFMDDANMCIAIAISLLMILICAMA
TYGAYKQRAAWIIPFFCYQIFDFALNMLVAITVLIYPNSIQEYIRQLPPNFPYRDDVMSV
NPTCLVLIILLFISIILTFKGYLISCVWNCYRYINGRNSSDVLVYVTSNDTTCSDLAGSA
PQGPVRAETAVAAPLRRFPERAVAPGNGFPQVLLPPYDDATVNGAAKEPPPPYVSA

>gi568815590f:97676010_97951471|GENSCAN_predicted_CDS_2|1071_bp
atgacgtcacggactcgggtcacatggccaagtccgccccgccccctccccgtccccgcc
gctgcagcggtcgccttcggagcgaagggtaccgacccggcagaagctcggagctctcgg
ggtatcgaggaggcaggcccgcgggcgcacgggcgagcgggccgggagccggagcggcgg
aggagccggcagcagcggcgcggcgggctccaggcgaggcggtcgacgctcctgaaaact
tgcgcgcgcgctcgcgccactgcgcccggagcgatgaagatggtcgcgccctggacgcgg
ttctactccaacagctgctgcttgtgctgccatgtccgcaccggcaccatcctgctcggc
gtctggtatctgatcatcaatgctgtggtactgttgattttattgagtgccctggctgat
ccggatcagtataacttttcaagttctgaactgggaggtgactttgagttcatggatgat
gccaacatgtgcattgccattgcgatttctcttctcatgatcctgatatgtgctatggct
acttacggagcgtacaagcaacgcgcagcctggatcatcccattcttctgttaccagatc
tttgactttgccctgaacatgttggttgcaatcactgtgcttatttatccaaactccatt
caggaatacatacggcaactgcctcctaattttccctacagagatgatgtcatgtcagtg
aatcctacctgtttggtccttattattcttctgtttattagcattatcttgacttttaag
ggttacttgattagctgtgtttggaactgctaccgatacatcaatggtaggaactcctct
gatgtcctggtttatgttaccagcaatgacactacgtgttcagatcttgctggcagtgct
ccccagggcccagtgcgagcggagacagcggtggcagcgcctctcaggcggtttccagag
cgggccgtggctcccgggaacggcttcccgcaggtgctgctacccccgtatgatgatgcc
actgtgaatggtgctgccaaggagccaccgccaccttacgtgtctgcctaa

>gi568815590f:97676010_97951471|GENSCAN_predicted_peptide_3|281_aa
MGKCRGPHTARSLCSHQQDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLGKVGVEAK
KPNSAIRKCVRVQWIKDGKKITAFVFSDGCLNLIVENHKALVAGFGQKGHAVGDISGVRF
QVVKPPGTGELVEGGAGHFDCRWPILSSASLQGSMGTSKAPAAAGERGALSPGSARPGGL
EVQADRPTDRIPSLGCPTRRRPPQARTAAPSAPGPRRLRPLRGQGEREGGAARPLGRESW
ARSLRRTSRAAAAPECPVGALWHAAGTPRPRPPRPRERETC

>gi568815590f:97676010_97951471|GENSCAN_predicted_CDS_3|846_bp
atgggcaagtgtcgtggacctcatactgctaggagtctctgtagtcaccaacaagatcag
aagtggcatgataaacagtacaagaaagcccatttgggcacagccctgaaggccaaccct
tttggaggtgcttctcatgcaaaaggaattgtgctgggaaaagtaggagttgaagccaaa
aagccaaattctgccattaggaagtgtgtcagggtccagtggatcaaggatggcaagaaa
atcacagcctttgtattcagtgatggttgcttgaaccttattgtggaaaaccataaagct
ctggttgctggatttggtcaaaaaggtcatgctgttggtgatatttctggagttcgcttt
caggttgtcaaacctccaggaactggggagctggtagaggggggtgccggccactttgac
tgtcgctggccaatcctgtcttctgcatccctccaaggctccatggggacatccaaggcg
ccggcggctgcaggtgagcgcggcgcgctttcccccggctctgcgcggccgggcggcctc
gaagtgcaggcggaccgacccaccgacagaataccgagcctgggctgcccgacgcgcagg
cgccctccccaggcccgcactgcagcccccagcgccccggggccccggcgccttcgaccc
ctccgaggacagggggagagggagggcggcgctgcccgacccctcggccgggagagctgg
gcgcgctccctgcgcaggacaagccgcgctgcagccgccccggagtgccccgtgggggcg
ctgtggcacgcagcggggacgcccagaccccggccaccgcgacccagggaaagggagacc
tgttga

>gi568815590f:97676010_97951471|GENSCAN_predicted_peptide_4|284_aa
MEKMLAGCFLLILGQIVLLPAEARERSRGRSISRGRHARTHPQTALLESSCENKRADLVF
IIDSSRSVNTHDYAKVKEFIVDILQFLDIGPDVTRVGLLQYGSTVKNEFSLKTFKRKSEV
ERAVKRMRHLSTGTMTGLAIQYALNIAFSEAEGARPLRENVPRVIMIVTDGRPQDSVAEV
AAKARDTGILIFAIGVGQVDFNTLKSIGSEPHEDHVFLVANFSQIETLTSVFQKKLCTAH
MCSTLEHNCAHFCINIPGSYVCRCKQGYILNSDQTTCRREKHIF

>gi568815590f:97676010_97951471|GENSCAN_predicted_CDS_4|855_bp
atggaaaagatgctcgcaggctgctttctgctgatcctcggacagatcgtcctcctccct
gccgaggccagggagcggtcacgtgggaggtccatctctaggggcagacacgctcggacc
cacccgcagacggcccttctggagagttcctgtgagaacaagcgggcagacctggttttc
atcattgacagctctcgcagtgtcaacacccatgactatgcaaaggtcaaggagttcatc
gtggacatcttgcaattcttggacattggtcctgatgtcacccgagtgggcctgctccaa
tatggcagcactgtcaagaatgagttctccctcaagaccttcaagaggaagtccgaggtg
gagcgtgctgtcaagaggatgcggcatctgtccacgggcaccatgactgggctggccatc
cagtatgccctgaacatcgcattctcagaagcagagggggcccggcccctgagggagaat
gtgccacgggtcataatgatcgtgacagatgggagacctcaggactccgtggccgaggtg
gctgctaaggcacgggacacgggcatcctaatctttgccattggtgtgggccaggtagac
ttcaacaccttgaagtccattgggagtgagccccatgaggaccatgtcttccttgtggcc
aatttcagccagattgagacgctgacctccgtgttccagaagaagttgtgcacggcccat
atgtgcagcaccctggagcataactgtgcccacttctgcatcaacatccctggctcatac
gtctgcaggtgcaaacaaggctacattctcaactcggatcagacgacttgcagaagggag
aaacacatcttttga

>gi568815590f:97676010_97951471|GENSCAN_predicted_peptide_5|38_aa
XNPVPWHSQRVSRLHKMIPKLPDPGLTARVKGKLDDGI

>gi568815590f:97676010_97951471|GENSCAN_predicted_CDS_5|117_bp
naaaatcctgtgccctggcacagccagagggtgagcagactgcacaaaatgatccctaag
ctcccagacccaggcctgacagccagggtcaaggggaagctggatgacggcatttag