GENSCAN 1.0	Date run:  6-Nov-116	Time: 08:09:33

Sequence gi568815579f:33700455_33911551 : 211097 bp : 49.73% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1969   2119  151  1  1   90   -5    96 0.252   0.66
 1.02 Intr +   5269   5466  198  0  0  130   33    97 0.275   7.95
 1.03 Intr +  12793  12937  145  0  1   71   97    20 0.015   1.06
 1.04 Intr +  23952  23994   43  1  1  103   71    18 0.051  -1.10
 1.05 Intr +  24094  24196  103  1  1   48   71    86 0.177   3.08
 1.06 Intr +  26603  26678   76  1  1  126   96    13 0.317   4.99
 1.07 Term +  30018  30181  164  1  2   84   48    86 0.313   2.30
 1.08 PlyA +  31822  31827    6                               1.05

 2.00 Prom +  33873  33912   40                              -3.46
 2.01 Init +  39325  39396   72  0  0   37   30    86 0.331  -1.23
 2.02 Intr +  39626  39813  188  1  2   35   76   156 0.472   7.59
 2.03 Intr +  49397  49467   71  2  2   39   96   112 0.265   5.93
 2.04 Intr +  51183  51309  127  1  1   62   70    64 0.811   1.74
 2.05 Intr +  55297  55542  246  1  0   37   74   148 0.555   4.87
 2.06 Intr +  62017  62186  170  1  2   -6   58   155 0.430   2.69
 2.07 Intr +  62994  63149  156  1  0   70   64    74 0.026   3.18
 2.08 Intr +  68565  68674  110  1  2   34   98     2 0.001  -4.20
 2.09 Term +  71503  72609 1107  0  0  117   55  1951 0.989 186.77
 2.10 PlyA +  73031  73036    6                               1.05

 3.00 Prom +  73291  73330   40                             -16.75
 3.01 Init +  73644  73759  116  2  2   74   47    61 0.848   0.28
 3.02 Intr +  73973  74197  225  2  0   86   49   253 0.961  18.30
 3.03 Intr +  74694  74841  148  0  1   58   80    62 0.490   2.64
 3.04 Intr +  76504  76639  136  0  1  118   36    14 0.573  -0.66
 3.05 Intr +  76734  76864  131  1  2  119   62    22 0.515   3.11
 3.06 Intr +  82067  82354  288  1  0   76   43   124 0.230   4.14
 3.07 Intr +  87081  87209  129  2  0   42   81    65 0.272   2.09
 3.08 Intr +  94607  94663   57  1  0  107   52    38 0.059   1.18
 3.09 Term +  94965  95012   48  2  0   83   50    53 0.049  -1.70
 3.10 PlyA +  97388  97393    6                               1.05

 4.00 Prom + 100243 100282   40                              -2.86
 4.01 Init + 100725 100888  164  2  2   85  110   327 0.991  31.80
 4.02 Intr + 106409 106553  145  2  1  100  115   304 0.999  34.58
 4.03 Intr + 110793 111098  306  2  0   87   94   691 0.965  66.25
 4.04 Term + 112336 112494  159  0  0  136   47   197 0.999  18.34
 4.05 PlyA + 114730 114735    6                               1.05

 5.07 PlyA - 114742 114737    6                               1.05
 5.06 Term - 117780 117725   56  1  2   72   39   101 0.173   1.32
 5.05 Intr - 132489 132340  150  1  0   52   94    45 0.001   1.63
 5.04 Intr - 140387 140346   42  0  0   93   92    30 0.000   2.11
 5.03 Intr - 162748 162665   84  2  0  105   78    24 0.293   2.89
 5.02 Intr - 166629 166458  172  0  1  108   75    32 0.131   3.42
 5.01 Init - 195692 195621   72  2  0   92   55    87 0.863   4.87

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr +  70959  70996   38  1  2  115  113   -13 0.984   1.88


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815579f:33700455_33911551|GENSCAN_predicted_peptide_1|293_aa
XTFLANTQQIVATVSSPNRSPKALPLVELIKPTTKTPSEISVQLENWVSHYGTMAATLSK
GPFGEGPGLAQQGTLQIRLPCCLCVTAMSPVLGEGPKSPESIQGGGIQGCGMGNDDGQSV
EMPHLPFKICDLLMEEGGLAPLVGHHHLGDAMVPSQGSQLCNGMLDEDTPGPHPGSAKEP
LEDTPSLTECGRKPGQYCLGLHLPRKALEGHKDQALSVPKMHFIHSRPGATSGHASCSPG
KKWHMPHCLFESLAYAAAYSSSLDVLLERGPNPDPKRGLLDLTQERIQGEFIK

>gi568815579f:33700455_33911551|GENSCAN_predicted_CDS_1|882_bp
nngacatttcttgccaacacccagcagattgtggcaactgtcagctccccaaaccgaagc
cccaaggctcttccattggttgaattaataaaacctacaacaaagacaccttctgaaatt
tcagtccaactggaaaactgggtctcccattatggcaccatggcagccacactcagcaag
ggtccctttggagaggggcctggcctggcccagcaagggactctgcagattcgccttccc
tgctgcctctgtgtcacagcgatgtccccagtactaggagagggacccaagagtcctgag
agcattcaaggaggtggcatccaggggtgtggtatgggcaatgatgatggtcagtctgtg
gagatgccacatcttcctttcaagatctgcgatctcctaatggaggaaggaggattggct
cccctggtaggccaccatcacctgggagatgcaatggtgccctcccaggggagccaatta
tgcaatggcatgcttgatgaggatacccccggcccccatccgggctcagccaaggagccc
ctggaggacacgccctccctcactgagtgtgggcgcaagcctggacagtattgcctgggg
ctgcatctgcctcggaaggccctggaggggcacaaagaccaggccctttctgtgccaaag
atgcacttcatccacagtcgcccgggagccacttctggccacgcgtcctgctccccagga
aagaagtggcacatgccccactgccttttcgagagtctggcttatgctgctgcctactcg
agttcattggatgtgttactggaaaggggtcccaatccagaccccaagagagggttattg
gatctcacgcaagaaagaattcagggcgaattcatcaagtga

>gi568815579f:33700455_33911551|GENSCAN_predicted_peptide_2|748_aa
MRALFSDIQALGISQKEMVKESDEDACKFSWNLMQIRGYAKAIQQAVGAPSGETQTSSQE
QTSCSSLQGYITRGLWCFFVEVPKLLGWRTKHPAHERVRVVALIVQQPLAGSIREWLQQG
HGIRQLGPGPTTLPAYLGSSVDEGDPLNLFETQAAALVGLQRKQENSSDIFFSSPFTVTP
DALPTAITWEHIPFAKLAGLIAGPLVEMCRQRLSKEFEALKGEFRDLGHCLPGAQRGNRI
TKRNKCGQSRQALIGQRQEDAGSAPLQMHPSVAALGAGAALREIQPLQREPELSSGPRNS
RLLCWGSPATWNPTYLSRVLGQQVAVTVTEAGLQAVPWGPSREFNAKGSSSASIRVGQPQ
KLRLRVQRSRRQCPPVQSSQDLPPGGSQDGDLKEPTERVTRDLSSGAPRGRNLPAPDQPQ
PPLQRGTRLRLRQRRRRLLIKKMPAAATIPANSSDAPFIRPGPGTLDGRWVSLHRSQQER
KRVMQEACAKYRASSSRRAVTPRHVSRIFVEDRHRVLYCEVPKAGCSNWKRVLMVLAGLA
SSTADIQHNTVHYGSALKRLDTFDRQGILHRLSTYTKMLFVREPFERLVSAFRDKFEHPN
SYYHPVFGKAILARYRANASREALRTGSGVRFPEFVQYLLDVHRPVGMDIHWDHVSRLCS
PCLIDYDFVGKFESMEDDANFFLSLIRAPRNLTFPRFKDRHSQEARTTARIAHQYFAQLS
ALQRQRTYDFYYMDYLMFNYSKPFADLY

>gi568815579f:33700455_33911551|GENSCAN_predicted_CDS_2|2247_bp
atgagagctctcttctctgacatccaggctctgggcatctctcaaaaagagatggtcaaa
gaatctgatgaggatgcctgcaagttttcctggaatttgatgcaaatacgaggctatgct
aaagccattcagcaagctgtaggagccccaagtggagaaactcaaactagttcacaggag
caaacatcatgcagctccctccaaggctacatcactcgtgggttgtggtgtttctttgtg
gaagtccccaagctcttaggctggcgcaccaagcacccagctcatgaaagggtccgggtc
gtggccctcatcgtgcagcagccattggcaggcagcatcagagagtggttacagcaagga
catggaatcagacagctcgggcctggacccaccactctgccagcctacctgggcagcagt
gtggatgagggtgacccacttaacctctttgagactcaagcagctgcgctggttggactt
caaaggaagcaggaaaacagctcagatatcttctttagctctcctttcacggtgacccca
gacgccctaccaacagccattacatgggagcacattccgtttgcaaagctggcgggtcta
attgcagggcctttggtggagatgtgcaggcagaggctaagcaaagagtttgaggccttg
aaaggggaattcagggacctcgggcactgtcttccaggagcccagcgagggaacagaatc
actaaacgaaacaagtgcggtcagagccgtcaggcgctcatcggccagagacaggaagat
gcaggctccgctcctctgcagatgcaccccagtgtcgctgcgctgggggcaggagctgcg
ctgcgggagattcagcccctgcaaagggaaccagagctgtcatcagggcccaggaacagc
cggctcctgtgctggggcagccctgccacctggaaccccacgtacctgtcccgtgtccta
gggcagcaggtggccgtgactgtgacagaggctggtctccaggctgtgccctggggaccc
agcagagaatttaatgccaagggctctagctcagcgagcattagagtgggacagccccag
aagcttaggctcagagtccagaggtccaggagacagtgtccccctgtccagtcctcacag
gacctcccaccaggcggctcccaggatggtgacttgaaggaacccacagagagggtcact
cgggacttatccagtggggccccgaggggccgcaacctgccagcgcctgaccagcctcaa
cccccgctgcagaggggaacccgtctgcggctccgccagcgccgtcgccgtctgctcatc
aagaaaatgccagctgcggcgaccatcccggccaacagctcggacgcgcccttcatccgg
ccgggacccgggacgctggatggccgctgggtcagcctgcaccggagccagcaggagcgc
aagcgggtgatgcaggaggcctgcgccaagtaccgggcgagcagcagccgccgggccgtc
acgccccgccacgtgtcccgtatcttcgtggaggaccgccaccgcgtgctctactgcgag
gtgcccaaggccggctgctccaattggaagcgggtgctcatggtgctggccggcctggcc
tcgtccactgccgacatccagcacaacaccgtccactatggcagcgctctcaagcgcctg
gacaccttcgaccgccagggtatcttgcaccgtctcagcacctacaccaagatgctcttt
gtccgcgagcccttcgagaggctggtgtccgccttccgcgacaagtttgagcaccccaac
agctactatcacccggtcttcggcaaggccatcctggcccggtaccgcgccaatgcctct
cgggaggccctgcggaccggctctggggtgcgttttcccgagttcgtccagtacctgctg
gacgtgcaccggcccgtggggatggacattcactgggaccatgtcagccggctctgcagc
ccctgcctcatcgactacgatttcgtaggcaagttcgagagcatggaggacgatgccaac
ttcttcctgagcctcatccgcgcgccgcggaacctgaccttcccccggttcaaggaccgg
cactcgcaggaggcgcggaccacagcgaggatcgcccaccagtacttcgcccaactctcg
gccctgcaaaggcagcgcacctacgacttctactacatggattacctgatgttcaactat
tccaagccctttgcagatctgtactga

>gi568815579f:33700455_33911551|GENSCAN_predicted_peptide_3|425_aa
MHMLWRRRGEAIEETSPKAYMFTPERAPEVSAVNVVLGRGDAADSPRGGATGSLGGPPGG
GPADSQVEKLPDPQVEELLDPQIEELLDLQVEELLDPQMEEMLDPQVEELLIPRKVSLVM
GAFGEARGSAPMASAQQGTPELSADTASGSSLETVRMTQPLPWGLVAHTGPVQGAQDKVR
QAVDRGSPIISPYSQAGFANFILRAEPLGSTRGEPSEHPAGVPHSSTALQAQGTQSWAQE
AVLNHGIQKWAKLRTELSIEDLGPQRSGRSLPQGPLPPRFIKERGLIDSQFHMAGDASGN
LRSWQKGKQTRLSSHGSRREKCRAKEEKRLIKPSDLVELTHYYKNSTGQCKNGLIQPALP
KPAHSSTPLQGIQEFQTEPGLPGHYEGIFIKEQLKIHKLRKLTDGACGIFLQADPERPPP
RECGR

>gi568815579f:33700455_33911551|GENSCAN_predicted_CDS_3|1278_bp
atgcacatgctctggaggaggagaggagaagccatagaggaaacttctccaaaagcatac
atgttcacaccagagagggctccagaagtgtcagcagtcaatgtggttctgggaagggga
gatgctgctgattctccacgtggaggtgccactggatccctgggtggacccccaggtgga
ggccctgctgattcccaggtggagaaactgccggatccccaggtggaggaactgctggat
ccccagatagaggaactgctggatctccaggtagaggaactgctggatccccagatggag
gaaatgctggatccccaagtggaggaattgctgatccccaggaaagtgtccctggtcatg
ggtgcatttggtgaagccagaggcagtgcccctatggcatctgctcagcagggaacacct
gaactctccgctgacacagcatctgggagcagcttggagacagtgaggatgacacagccc
ctcccctggggtttggtggcccatacagggcctgtccaaggggcccaggacaaagtcagg
caggcagtggacagggggtcccccatcatctccccctactctcaggcagggtttgccaat
ttcatcctcagggctgagccccttgggagcactcgtggtgaacccagcgaacatcctgct
ggcgtccctcactcctccactgctctacaagcccaggggacccagagctgggcacaagag
gctgtgttgaaccacgggatccagaaatgggcaaagctcagaacagagctgagcatcgag
gatctgggaccacagagaagtgggaggagtctcccacaaggtcctctgccacccagattt
ataaaggaaagaggtttaatcgactcacagttccacatggctggggatgcttcaggaaac
ttacgatcatggcagaaagggaagcaaacacgtctttcttcacatggcagcaggagagag
aagtgccgagcaaaggaggaaaagcgtcttataaaaccatcagatcttgtggaactcact
cactattacaagaacagcacggggcaatgcaagaatggactaatacagccagctcttccc
aagccagcacattccagcaccccactccaaggaatccaagaattccagaccgaacccggg
cttccaggtcattatgaaggtatattcatcaaggagcagctcaaaatccataaattaagg
aaattaactgatggggcctgcggcatctttctccaggccgaccccgagcgccccccaccc
cgggagtgcggccgctag

>gi568815579f:33700455_33911551|GENSCAN_predicted_peptide_4|257_aa
MSRLSLTRSPVSPLAAQGIPLPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPDSRISRLF
NGTEPIVLDSLKQHYFIDRDGEIFRYVLSFLRTSKLLLPDDFKDFSLLYEEARYYQLQPM
VRELERWQQEQEQRRRSRACDCLVVRVTPDLGERIALSGEKALIEEVFPETGDVMCNSVN
AGWNQDPTHVIRFPLNGYCRLNSVQVLERLFQRGFSVAASCGGGVDSSQFSEYVLCREER
RPQPTPTAVRIKQEPLD

>gi568815579f:33700455_33911551|GENSCAN_predicted_CDS_4|774_bp
atgtcccggctgtctctcacccggtcgcctgtgtctcccctggctgcccagggcatcccc
ctgccagcccagctcaccaagtccaatgcacctgtgcacatcgatgtgggcggccacatg
tacaccagcagcctggccacgctcaccaagtaccctgactccaggataagccgcctcttc
aatggcactgaacccatcgtcctggacagtttgaagcaacattatttcattgaccgggat
ggggagattttccgctacgtcctgagcttcctgcggacgtccaagctgctgcttccggat
gactttaaggacttcagtctgctgtacgaggaggcgcgctactatcagctccagcccatg
gtgcgcgagctggagcgctggcagcaggagcaggagcagcggcgccgcagccgggcctgt
gactgcctggtggtgcgcgtcacgcccgacttgggcgagcggatcgcactcagcggcgag
aaggccctcatcgaggaggtcttccccgagaccggagacgtcatgtgcaactccgtcaac
gccggctggaaccaggaccccacgcacgtcatccgcttcccgctcaatggctactgccgg
ctcaactcggtacaggtcctggagcggctgttccagaggggtttcagcgtggctgcgtcc
tgtgggggcggtgtggactcctcccagttcagcgagtatgtgctttgccgggaggagcgg
cggccgcagcccacccccactgctgttcgaatcaagcaggaacccctggactag

>gi568815579f:33700455_33911551|GENSCAN_predicted_peptide_5|191_aa
MARARWLTPVIPALWETEAGRLLEQELWSPRPSLWPPPLEVPASTGLIFVDLVFQPSVAC
LLADPGFSLSVSAMQVPVGFSGPCSSLPGLQLHPSAVNLAMPSGQCLLGVSTHIYCEIME
LVLCRRHFPELLGVCGLHSSAKWFRGPGSSYATAWRAGRHRAKLTLPLQAVIAVHKALPY
LTGPPENIGAA

>gi568815579f:33700455_33911551|GENSCAN_predicted_CDS_5|576_bp
atggcccgggcgcggtggctcacgcctgtaatcccagcactttgggagactgaggcgggc
cgattactcgagcaggagctgtggagtcctaggccttcactttggcctcctcctctggag
gtacccgcaagcacaggactgatatttgtggacctagtgttccagccctctgttgcctgc
ctgctcgccgaccctgggttctcactaagtgtctctgccatgcaagtgcctgttggcttc
tcaggcccctgctccagcctgcctggcctccagctgcacccgtcagctgtcaaccttgct
atgccttctggtcagtgtcttctcggagtatctactcacatctattgtgagataatggag
ctcgtgttatgcagaaggcacttccctgagctgcttggtgtttgcgggctacattcttct
gctaaatggtttagagggcctgggtcttcttatgccactgcatggagggcaggtagacac
agagctaagctgacgctgcccctgcaggctgtgattgcagtccacaaagcattaccttac
ctcaccggtcctccagagaacatcggggctgcctag