GENSCAN 1.0	Date run:  6-Nov-116	Time: 08:37:47

Sequence gi568815582f:84550868_84762130 : 211263 bp : 47.41% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   2788   2920  133  2  1  107   59    33 0.747   2.00
 1.02 Intr +   5059   5288  230  1  2  114   89    63 0.515   6.51
 1.03 Term +   7549   7619   71  2  2  131   55    17 0.412   0.80
 1.04 PlyA +  11482  11487    6                               1.05

 2.12 PlyA -  14757  14752    6                               1.05
 2.11 Term -  16088  15978  111  2  0  102   40   214 0.456  16.56
 2.10 Intr -  29198  29116   83  0  2   63   50    78 0.276   0.86
 2.09 Intr -  33222  33195   28  0  1  115   32    44 0.240  -0.81
 2.08 Intr -  39395  39238  158  0  2   82   84   322 0.753  30.93
 2.07 Intr -  56449  56163  287  0  2  115   57   182 0.210  14.79
 2.06 Intr -  57514  57480   35  1  2   43  119    11 0.083  -3.28
 2.05 Intr -  63354  63290   65  1  2  105   75    44 0.097   3.24
 2.04 Intr -  64235  64141   95  1  2   48   79   107 0.555   5.41
 2.03 Intr -  65745  65706   40  1  1   66   21    66 0.437  -5.02
 2.02 Intr -  66716  66634   83  1  2   50   91   123 0.946   8.08
 2.01 Init -  67047  66971   77  0  2  103   62   216 0.701  21.06
 2.00 Prom -  77605  77566   40                              -1.06

 3.00 Prom +  91757  91796   40                              -1.46
 3.01 Init +  92071  92135   65  0  2   72   71    49 0.539   0.95
 3.02 Intr +  92565  92613   49  0  1  104   69    25 0.474   0.88
 3.03 Intr +  98021  98199  179  1  2   55   36   200 0.982  10.22
 3.04 Intr +  99985 100063   79  1  1  101   66    27 0.972   1.35
 3.05 Intr + 106004 107077 1074  1  0  107  100  2580 0.997 251.50
 3.06 Intr + 108893 109050  158  1  2   23   53   232 0.689  12.01
 3.07 Term + 110711 111266  556  2  1  122   46  1237 0.999 116.70
 3.08 PlyA + 114164 114169    6                               1.05

 4.03 PlyA - 114671 114666    6                               1.05
 4.02 Term - 115117 115029   89  2  2   70   49   103 0.527   2.42
 4.01 Init - 117349 117319   31  1  1   50   94    62 0.540   2.91
 4.00 Prom - 140507 140468   40                              -2.86

 5.00 Prom + 141893 141932   40                              -5.36
 5.01 Init + 149019 149179  161  2  2   42   49   227 0.295  11.50
 5.02 Intr + 161361 161536  176  0  2   93   60     0 0.017  -2.72
 5.03 Intr + 162568 162644   77  2  2  114   75     9 0.273   1.43
 5.04 Intr + 182568 182636   69  2  0   95   94    26 0.053   3.28
 5.05 Intr + 189442 189502   61  0  1   75  103    23 0.186   0.81
 5.06 Intr + 193766 194806 1041  0  0   91   80   740 0.884  63.95
 5.07 Intr + 201003 201131  129  1  0   64   44    63 0.451   0.17
 5.08 Intr + 202570 202688  119  2  2  111   80    31 0.297   4.78
 5.09 Term + 207809 208012  204  1  0   35   36   129 0.026  -0.23
 5.10 PlyA + 209610 209615    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  63354  63185  170  1  2  105   36    85 0.832   3.04
S.002 Term + 165328 165402   75  0  0  139   38    38 0.859   1.74


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815582f:84550868_84762130|GENSCAN_predicted_peptide_1|144_aa
XPQLRNLRWVEENEQFPSLHKHFRQKTTEHKVFDADETDGLDGGLNVNPRLLDLQVCQEK
LKARFLGETFASLNVSTQSKLRTGTSRRCCASHALHDSEDVGFMFVPVWSAPYSKLHTAQ
PGLTSRFHCARCISARVDLLKTKV

>gi568815582f:84550868_84762130|GENSCAN_predicted_CDS_1|435_bp
nggcctcagttaaggaacctaagatgggtagaggaaaatgaacaatttccttccctacat
aagcatttcaggcagaagacaactgaacacaaggtgttcgatgctgacgaaactgacggg
ttggatggagggctgaatgtaaacccaaggttactggatcttcaggtttgtcaagaaaag
ctgaaagctagatttttaggtgaaacctttgcatctttaaatgttagcacccaatccaaa
cttcggactgggacttccaggcgctgttgtgcaagtcatgccctgcacgactccgaggac
gtcggtttcatgtttgttccagtgtggagtgctccctacagtaaactgcacactgcgcag
ccagggctcacctctcgttttcattgtgcccgatgcatctctgctcgggtggacctactc
aaaaccaaggtctga

>gi568815582f:84550868_84762130|GENSCAN_predicted_peptide_2|353_aa
MATKIDKEACRAAYNLVRDDGSAVIWVTFKYDGSTIVPGEQGAEYQHFIQQCTVGSKLSD
NGSTARRDNGLNTGTGWIAVTTLDVPYLGHTSEQPGVAAQFAWDGQRPCEGGEKCPVQIN
KMMKDDRCVSSWPVDSLPSACTVFICFAFLEDSYTPVKARCECSLCSDALLVFVVLVSRM
VVVCMSVSSTPWRSPPGERDFVPLVVVSLAGNPHPSWLDGCQSLSPMDDVRLFAFVRFTT
GDAMSKRSKFALITWIGENVSGLQRAKTGTDKTLVKEVVQDCGDNAVTAGTCQQLASGRC
GAVIPDTVASTVYSRCANFAKEFVISDRKELEEDFIKSELKKAGGANYDAQTE

>gi568815582f:84550868_84762130|GENSCAN_predicted_CDS_2|1062_bp
atggccaccaagatcgacaaagaggcttgccgggcggcgtacaacctggtgcgcgacgac
ggctcggccgtcatctgggtgacttttaaatatgacggctccaccatcgtccccggcgag
cagggagcggagtaccagcacttcatccagcagtgcacagttggaagcaagctttcggac
aacggcagcacagcccggagggacaatggactcaacactggcactggctggatagcagtc
accacgctcgacgtgccttatcttggtcatacctcagaacagcctggtgtggcagctcag
ttcgcctgggatggtcagagaccttgcgagggcggtgagaaatgcccagtgcagattaat
aaaatgatgaaggatgatagatgtgtatcttcctggcctgtggactctcttccctctgcc
tgcactgtcttcatctgtttcgccttcctggaggactcctacacacccgtcaaggcccgg
tgtgaatgttccctctgctcggatgccctccttgtctttgtggtgttggtgtcccgtatg
gtggtcgtgtgcatgtctgtttcttcaactccttggcgaagtcctcctggagagagggac
tttgtccctttggtggtggtatccttggcggggaatccccatccttcatggttagatggc
tgccaatctctttcccccatggatgacgtccggttgtttgccttcgtgcgcttcaccacc
ggggatgccatgagcaagaggtccaagtttgccctcatcacgtggatcggtgagaacgtc
agcgggctgcagcgcgccaaaaccgggacggacaagaccctggtgaaggaggtcgtacag
gattgtggggacaatgcagtgaccgctggcacctgccagcagctggcctccggacgctgt
ggtgcagtgattcccgacacagtcgctagcacggtatacagtcgctgtgccaatttcgct
aaggagtttgtgatcagtgatcggaaggagctggaggaagatttcatcaagagcgagctg
aagaaggcggggggagccaattacgacgcccagacggagtaa

>gi568815582f:84550868_84762130|GENSCAN_predicted_peptide_3|719_aa
MEKLRHNGAKLLAQFTQLGVARRLGLGNTQQGKLLQQQVSGPRPGPSRLRLLAAGWSLLG
GRCAEFRLGCGVRANDSGVPGDPAGEPVSAASLSPTLRAEISLMMEGSRQTRVSRPYKIS
ESSKVYRWADHSSTVLQRLNEQRLRGLFCDVVLVADEQRVPAHRNLLAVCSDYFNSMFTI
GMREAFQKEVELIGASYIGLKAVVDFLYGGELVLDGGNIDYVLETAHLLQIWTVVDFCCE
YLEQEVSEDNYLYLQELASIYSLKRLDAFIDGFILNHFGTLSFTPDFLQNVSMQKLCVYL
SSSEVQRECEHDLLQAALQWLTQQPEREAHARQVLENIHFPLIPKNDLLHRVKPAVCSLL
PKEANCEGFIEEAVRYHNNLAAQPVMQTKRTALRTNQERLLFVGGEVSERCLELSDDTCY
LDAKSEQWVKETPLPARRSHHCVAVLGGFIFIAGGSFSRDNGGDAASNLLYRYDPRCKQW
IKVASMNQRRVDFYLASIEDMLVAIGGRNENGALSSVETYSPKTDSWSYVAGLPRFTYGH
AGTIYKDFVYISGGHDYQIGPYRKNLLCYDHRTDVWEERRPMTTARGWHSMCSLGDSIYS
IGGSDDNIESMERFDVLGVEAYSPQCNQWTRVAPLLHANSESGVAVWEGRIYILGGYSWE
NTAFSKTVQVYDREADKWSRGVDLPKAIAGGSACVCALEPRPEDKKKKGKGKRHQDRGQ

>gi568815582f:84550868_84762130|GENSCAN_predicted_CDS_3|2160_bp
atggagaaactgaggcacaacggagctaagttgctggcccagttcacacagctgggagta
gccaggagactcggacttggaaacacccagcagggaaaattgctgcagcagcaggtgagt
ggcccccgccccgggccgtcccgactccgcctcctcgccgccggctggagcctgctgggc
ggccgttgcgctgagttccgcctgggctgcggggtccgagcgaacgacagcggcgtcccc
ggagaccccgccggcgagccggtgtcagcagcgtcgctttctccaacgctgagggctgaa
atctctttaatgatggagggaagcaggcagacgcgagtgtctcggccatacaagatcagc
gaatcatcaaaggtataccgctgggccgaccactcaagcacggtgctgcagcggctgaac
gagcagcgtctccgcgggctcttctgcgacgtcgtcctggtggccgatgagcagcgtgtg
ccagcccatcgcaacctgctggccgtgtgcagcgactacttcaactccatgttcaccatc
ggcatgcgggaagctttccagaaggaggtggagctgatcggcgcctcctacattgggctc
aaggccgtggtggacttcctgtacggcggggagctggtgctggatggcggcaacattgac
tacgtcctggagacggctcacctgctgcagatctggacggtggtagacttctgctgtgag
tacctggagcaggaggtgagcgaggacaactacctgtacctgcaggagctggcctccatc
tacagcctcaagcggcttgatgccttcatcgatggcttcatcctgaaccacttcggcacg
ctgtcctttacgcccgacttcctgcagaacgtctccatgcagaagctgtgtgtctacctg
agcagcagcgaggtgcagcgggagtgtgagcacgacctcctgcaggccgccctgcagtgg
ctgacgcagcagcccgagcgcgaggcccacgcccgccaggtgctggagaacatccacttc
ccgctcatccccaagaacgacctgctgcaccgcgtcaagccggccgtgtgctcgctgctg
cccaaggaggccaactgcgagggcttcatcgaggaggccgtgcgctaccacaacaacctg
gcggcccagcccgtcatgcagaccaagcgcacggcgctgcgcaccaaccaggagcgcctg
ctgtttgtgggcggcgaggtctccgagcggtgtctggagctcagtgacgacacctgctac
ctggacgccaagagcgagcagtgggtcaaagagacgccgctgcccgcccggcggagccac
cactgtgtcgcggtgctggggggcttcatcttcatcgccggcggcagcttctcacgggac
aacggaggggatgcggcctccaatcttctttataggtatgacccccgctgtaaacagtgg
atcaaggtggcctccatgaaccagcgccgtgtggatttctaccttgcctccatcgaagac
atgctggtggccatcggcggccggaatgagaacggagcgctctcttcagtagagacgtac
agtcccaagactgactcctggtcctatgtggccggcttgccaaggttcacgtacggccac
gcgggcaccatctacaaagacttcgtgtacatctcggggggccacgactaccaaattggc
ccctaccgcaagaacctgctatgctacgaccaccggacagacgtgtgggaggagcggcgg
cccatgaccacggcgcgcggctggcacagcatgtgcagcctgggtgacagcatctactcc
atcgggggcagcgatgacaacatcgagtccatggagcgcttcgacgtgctgggcgtggag
gcctacagcccgcagtgcaaccagtggacccgcgtggcgccgctgctgcacgccaacagc
gagtcgggcgtggcagtgtgggagggccgcatctacatcctgggcggctacagctgggag
aacactgccttctccaagaccgtgcaggtgtacgaccgcgaggccgacaagtggagcagg
ggcgtcgacctgcccaaggccatcgctggcgggtccgcctgtgtctgcgccctggagcca
cggccagaggacaagaagaagaaaggcaaaggcaagaggcaccaggaccggggccagtga

>gi568815582f:84550868_84762130|GENSCAN_predicted_peptide_4|39_aa
MLLKRMRKNPGLGPVDGVPTTGSDSHKAHEMLLHHGGPG

>gi568815582f:84550868_84762130|GENSCAN_predicted_CDS_4|120_bp
atgcttctgaagcggatgcgaaagaacccaggtttgggaccagtggacggggttccaacc
acgggctctgacagccacaaggcccatgagatgctgctgcaccatggaggaccagggtga

>gi568815582f:84550868_84762130|GENSCAN_predicted_peptide_5|678_aa
MSAARQAHAHLSAAQAQQRAGLPAPRGARPVRRRGGRCECVCAGEKMAAAGEAARQSAVY
RGPCGPVLRVAEGRHGSAWGDCALCRGQHHMDEPEAAAGLAALSGQEGFLESEHFTPNTL
HTRYPDVCVWFTLSSSPNYIFGDFSPDEFNQFFVTPRSSVELPPYSGTVLCGTQAVDKLP
DGQEYQRIEFGVDEVIEPSDTLPRTPSYSISSTLNPQAPEFILGCTASKITPDGITKEAS
YGSIDCQYPGSALALDGSSNVEAEVLENDGVSGGLGQRERKKKKKRPPGYYSYLKDGGDD
SISTEALVNGHANSAVPNSVSAEDAEFMGDMPPSVTPRTCNSPQNSTDSVSDIVPDSPFP
GALGSDTRTAGQPEGGPGADFGQSCFPAEAGRDTLSRTAGAQPCVGTDTTENLGVANGQI
LESSGEGTATNGVELHTTESIDLDPTKPESASPPADGTGSASGTLPVSQPKSWASLFHDS
KPSSSSPVAYVETKYSPPAISPLVSEKQVEVKEGLVPVSEDPVAIKIAGKQNLMCKICVR
IIIAYDDIKVYDAGIAFELINNFSGLICGSPWGILMSVLSWPSCREWSAYVFTCVLIFAI
AERGAAPYLFQMSSISEICFFTLSELLENVTLIHKPVSLQPRGLINKGNWCYINAVSFLD
AVRKASLLQLSLLWVHVT

>gi568815582f:84550868_84762130|GENSCAN_predicted_CDS_5|2037_bp
atgtccgcggcccggcaggcgcacgcccacctgtcggccgcgcaggcgcagcagcgggcc
ggcctccccgcgccccgcggcgcgcggccagtgcgcaggcgcggcggccgatgcgagtgt
gtatgtgcgggcgagaagatggcggcggcgggggaagcagcgaggcagtcagctgtgtac
agaggcccttgtggtcctgtcctgagagtagcggaaggaagacatggctctgcctgggga
gactgtgccttatgcagaggccaacaccacatggatgagccggaagcagccgctggcctg
gctgctctttcgggtcaggaaggctttcttgagtctgagcacttcacacctaatacccta
catacccgctatcctgacgtgtgtgtctggttcactctctcgtcctcccccaattatatt
tttggagattttagccctgatgaattcaatcaattctttgtgactcctcgatcttcagtt
gagcttcctccatacagtggaacagttctgtgtggcacacaggctgtggataaactacct
gatggacaagaatatcagagaattgagtttggtgtcgatgaagtcattgaacccagtgac
actttgccgagaacccccagctacagtatttcaagcacactgaaccctcaggcccctgaa
tttattctcggttgtacagcttccaaaataacccctgatggtatcactaaagaagcaagc
tatggctccatcgactgccagtacccaggctctgccctcgctttggatggaagttctaat
gtggaggcggaagttttggaaaatgatggtgtctcaggtggtcttggacaaagggagcgt
aaaaagaagaaaaagcggccacctggatattacagctatttgaaagatggtggcgatgat
agtatctccacagaagccctggtcaatggccatgccaattcagcagtcccgaacagtgtc
agtgcagaggatgcagaatttatgggtgacatgcccccgtcagttacgcccaggacttgt
aacagcccccagaactccacagactctgtcagtgacattgtgcctgacagtcctttcccc
ggagcactcggcagtgacaccaggactgcagggcagccagaggggggccccggggctgat
tttggtcagtcctgcttccctgcagaggctggcagagacaccctgtcaaggacagctggg
gctcagccctgcgttggtaccgatactactgaaaaccttggagttgctaatggacaaata
cttgaatcctcgggtgagggcacagctaccaacggggtggagttgcacaccacggaaagc
atagacttggacccaaccaaacccgagagtgcatcacctcctgctgacggcacgggctct
gcatcaggcacccttcctgtcagccagcccaagtcctgggccagcctctttcatgattct
aagccctcttcctcctcgccggtggcctatgtggaaactaagtattcccctcccgccata
tctcccctggtttctgaaaagcaggttgaagtcaaagaagggcttgttccggtttcagag
gatcctgtagccataaagattgcaggaaaacagaatttgatgtgtaaaatatgtgtaaga
ataatcatagcttatgatgacataaaagtttacgatgctggtattgcctttgagttgata
aacaatttcagtgggctgatttgtggcagcccttgggggattctgatgtctgtattgagc
tggccgtcatgccgggagtggtctgcttatgtatttacatgcgtgctcatctttgctata
gctgagcgtggtgcagctccttacctgttccagatgtcatcaatttctgaaatatgcttc
ttcactctttcagagttgctggagaatgtaaccctaatccataaaccagtgtcgttgcaa
ccccgtgggctgatcaataaagggaactggtgctacattaatgctgtatccttcctggac
gccgtccgcaaggccagcttgttgcagctgtccctcctttgggtgcatgtgacttag