GENSCAN 1.0	Date run:  6-Nov-116	Time: 20:39:32

Sequence gi568815589f:2522190_2752949 : 230760 bp : 40.46% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1594   1753  160  0  1   98   55    84 0.472   6.14
 1.02 Intr +   7668   7825  158  1  2   46  100    64 0.181   2.21
 1.03 Intr +  27236  27461  226  1  1   48   77   261 0.009  17.64
 1.04 Term +  74606  74814  209  0  2   90   49   121 0.315   4.92
 1.05 PlyA +  75089  75094    6                               1.05

 2.00 Prom +  85187  85226   40                              -4.95
 2.01 Init + 100001 100082   82  1  1  112  117   243 0.802  28.78
 2.02 Intr + 100347 100391   45  1  0   88   92    28 0.463   0.66
 2.03 Intr + 113264 113383  120  0  0   98  103   180 0.962  20.05
 2.04 Intr + 117670 117792  123  2  0   36   78   204 0.998  13.84
 2.05 Intr + 119188 119310  123  2  0   49   83    99 0.947   5.14
 2.06 Intr + 120971 121342  372  0  0   68   91   423 0.999  34.71
 2.07 Intr + 121439 121561  123  0  0   83   91   194 0.999  18.84
 2.08 Intr + 121648 121770  123  2  0   94   91    82 0.989   8.74
 2.09 Intr + 122545 122664  120  2  0   74  105    85 0.738   8.35
 2.10 Intr + 122768 122893  126  0  0   59   67   170 0.995  11.73
 2.11 Intr + 123385 123556  172  2  1   56   93   124 0.900   7.78
 2.12 Intr + 124145 124363  219  2  0  103    5   254 0.605  15.10
 2.13 Intr + 125285 125403  119  2  2   74   76   114 0.632   7.99
 2.14 Intr + 126019 126158  140  2  2   95   94    40 0.998   4.56
 2.15 Intr + 126480 126621  142  2  1   64   86   140 0.997  10.41
 2.16 Intr + 128181 128327  147  1  0   97   78    87 0.966   7.89
 2.17 Intr + 129226 129309   84  2  0   73   57    82 0.846   2.47
 2.18 Intr + 129685 129765   81  2  0  122   84    57 0.994   7.39
 2.19 Intr + 130591 130760  170  2  2   81   92   161 0.973  14.54
 2.20 Term + 131644 131679   36  0  0  104   38    59 0.823  -1.14
 2.21 PlyA + 133890 133895    6                               1.05

 3.04 PlyA - 135073 135068    6                               1.05
 3.03 Term - 135557 135413  145  1  1   62   42   145 0.298   3.70
 3.02 Intr - 142886 142780  107  2  2   60  114   101 0.608   7.99
 3.01 Init - 145838 145749   90  2  0   34  116    24 0.218   0.34
 3.00 Prom - 148894 148855   40                              -6.25

 4.00 Prom + 149267 149306   40                              -2.35
 4.01 Init + 149829 149924   96  2  0   51   39   114 0.334   3.16
 4.02 Term + 187592 187717  126  1  0   80   33   126 0.470   3.60
 4.03 PlyA + 188670 188675    6                               1.05

 5.00 Prom + 190695 190734   40                              -2.55
 5.01 Init + 195551 197099 1549  1  1   91   97  1964 0.463 190.22
 5.02 Intr + 200676 200833  158  1  2   61   71    67 0.018   1.11
 5.03 Term + 207257 207538  282  1  0  122   35   203 0.796  12.84
 5.04 PlyA + 207828 207833    6                               1.05

 6.03 PlyA - 210153 210148    6                               1.05
 6.02 Term - 212647 212476  172  0  1   46   49   136 0.866   1.82
 6.01 Init - 213285 213200   86  0  2   75   65   101 0.879   6.84
 6.00 Prom - 216759 216720   40                              -7.05

 7.00 Prom + 218656 218695   40                              -2.65
 7.01 Init + 220085 220466  382  1  1   77    3   205 0.444   7.98
 7.02 Intr + 223451 223573  123  0  0   79   32    84 0.489   1.54
 7.03 Intr + 224170 224329  160  2  1   68   71    88 0.770   3.22
 7.04 Term + 224537 224777  241  2  1   17   49   185 0.448   2.01
 7.05 PlyA + 224994 224999    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 204743 204940  198  1  0   75   59   132 0.943   7.95


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589f:2522190_2752949|GENSCAN_predicted_peptide_1|250_aa
MAIMRLSRSVRDAGFSQDRGTRPTCASPSATSIKPRQIPHNKTEDKTQMKISGVQVNDRE
ALNTFYVPGTDVSTSLSITSFKLHRIPILQIKAPRPKEVKHLFKVPVWKCDPFTSIGMWA
EGKKLLLDLAHKTYQLKKEDHGHLVEGRAMEWKKPESVKLCQDRNCPTGNTYTGPFRHKK
IAPILRSCFCFQTIVCLIPTNSKTAKGLAGNTPSGDAPRVYSHCGARGEGKVEKSRKKNL
SAALQDQRLL

>gi568815589f:2522190_2752949|GENSCAN_predicted_CDS_1|753_bp
atggccataatgagactcagccgcagcgtaagagatgctggcttctcacaggaccgtggg
accaggcccacctgtgcctctccctcagccacaagcattaagcccagacaaattcctcac
aacaaaactgaagacaaaacgcaaatgaaaatatcaggagtacaagtcaatgaccgtgaa
gcactgaatactttctatgtgcctggcactgatgtgagcacttcgttatctattacctca
tttaaactacacagaatacccattttacagataaaggcaccaaggcccaaagaggttaaa
cacctttttaaggtgccagtgtggaaatgtgatccgtttacatccataggaatgtgggca
gaaggcaagaaactacttctcgacctggcccataaaacctaccagctgaagaaagaagac
catgggcacctggtggaaggtagagccatggaatggaagaagcccgagtccgtgaaactc
tgccaagatagaaactgcccgactgggaacacctacactggaccgttcagacacaagaaa
atagcaccaatcctgagatcttgtttttgctttcaaacaatcgtctgcctaattcccact
aactctaaaacagcaaaggggctggctggcaacaccccaagtggtgatgcccctcgggtc
tattcacattgtggagcaagaggagaggggaaggtggagaagtccagaaaaaagaacctg
tctgcggccttgcaggatcagcggcttctgtga

>gi568815589f:2522190_2752949|GENSCAN_predicted_peptide_2|888_aa
MGTSALWALWLLLALCWAPRESGATGTEPLLRLVSRPLDGRRGRKAKCEPSQFQCTNGRC
ITLLWKCDGDEDCVDGSDEKNCVKKTCAESDFVCNNGQCVPSRWKCDGDPDCEDGSDESP
EQCHMRTCRIHEISCGAHSTQCIPVSWRCDGENDCDSGEDEENCGNITCSPDEFTCSSGR
CISRNFVCNGQDDCSDGSDELDCAPPTCGAHEFQCSTSSCIPISWVCDDDADCSDQSDES
LEQCGRQPVIHTKCPASEIQCGSGECIHKKWRCDGDPDCKDGSDEVNCPSRTCRPDQFEC
EDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISKVCNQEQDCR
DWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKTCGDIDECQNPGI
CSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPSLIFTNRRDIRKIGLERKEYIQLV
EQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHVKMIDNVYNPAAIAVDWVYK
TIYWTDAASKTISVATLDGTKRKFLFNSDLREPASIAVDPLSGFVYWSDWGEPAKIEKAG
MNGFDRRPLVTADIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVLKSLEFLA
HPLALTIFEDRVYWIDGENEAVYGANKFTGSELATLVNNLNDAQDIIVYHELVQPSGKNW
CEEDMENGGCEYLCLPAPQINDHSPKYTCSCPSGYNVEENGRDCQSTATTVTYSETKDTN
TTEISATSGLVPGGINVTTAVSEVSVPPKGTSAAWAILPLLLLVMAAVGGYLMWRNWQHK
NMKSMNFDNPVYLKTTEEDLSIDIGRHSASVGHTYPAISVVSTDDDLA

>gi568815589f:2522190_2752949|GENSCAN_predicted_CDS_2|2667_bp
atgggcacgtccgcgctctgggcgctctggctgctgctcgcgctgtgctgggcgccccgg
gagagcggcgccaccggaaccgagccgctgcttcgcctcgtttctcgccctcttgacggg
cgccgagggagaaaagccaaatgtgaaccctcccaattccagtgcacaaatggtcgctgt
attacgctgttgtggaaatgtgatggggatgaagactgtgttgacggcagtgatgaaaag
aactgtgtaaagaagacgtgtgctgaatctgacttcgtgtgcaacaatggccagtgtgtt
cccagccgatggaagtgtgatggagatcctgactgcgaagatggttcagatgaaagccca
gaacagtgccatatgagaacatgccgcatacatgaaatcagctgtggcgcccattctact
cagtgtatcccagtgtcctggagatgtgatggtgaaaatgattgtgacagtggagaagat
gaagaaaactgtggcaatataacatgtagtcccgacgagttcacctgctccagtggccgc
tgcatctccaggaactttgtatgcaatggccaggatgactgcagcgatggcagtgatgag
ctggactgtgccccgccaacctgtggcgcccatgagttccagtgcagcacctcctcctgc
atccccatcagctgggtatgcgacgatgatgcagactgctccgaccaatctgatgagtcc
ctggagcagtgtggccgtcagccagtcatacacaccaagtgtccagccagcgaaatccag
tgcggctctggcgagtgcatccataagaagtggcgatgtgatggggaccctgactgcaag
gatggcagtgatgaggtcaactgtccctctcgaacttgccgacctgaccaatttgaatgt
gaggatggcagctgcatccatggcagcaggcagtgtaatggtatccgagactgtgtcgat
ggttccgatgaagtcaactgcaaaaatgtcaatcagtgcttgggccctggaaaattcaag
tgcagaagtggagaatgcatagatatcagcaaagtatgtaaccaggagcaggactgcagg
gactggagtgatgagcccctgaaagagtgtcatataaacgaatgcttggtaaataatggt
ggatgttctcatatctgcaaagacctagttataggctacgagtgtgactgtgcagctggg
tttgaactgatagataggaaaacctgtggagatattgatgaatgccaaaatccaggaatc
tgcagtcaaatttgtatcaacttaaaaggcggttacaagtgtgaatgtagtcgtggctat
caaatggatcttgctactggcgtgtgcaaggcagtaggcaaagagccaagtctgatcttc
actaatcgaagagacatcaggaagattggcttagagaggaaagaatatatccaactagtt
gaacagctaagaaacactgtggctctcgatgctgacattgctgcccagaaactattctgg
gccgatctaagccaaaaggctatcttcagtgcctcaattgatgacaaggttggtagacat
gttaaaatgatcgacaatgtctataatcctgcagccattgctgttgattgggtgtacaag
accatctactggactgatgcggcttctaagactatttcagtagctaccctagatggaacc
aagaggaagttcctgtttaactctgacttgcgagagcctgcctccatagctgtggaccca
ctgtctggctttgtttactggtcagactggggtgaaccagctaaaatagaaaaagcagga
atgaatggattcgatagacgtccactggtgacagcggatatccagtggcctaacggaatt
acacttgaccttataaaaagtcgcctctattggcttgattctaagttgcacatgttatcc
agcgtggacttgaatggccaagatcgtaggatagtactaaagtctctggagttcctagct
catcctcttgcactaacaatatttgaggatcgtgtctactggatagatggggaaaatgaa
gcagtctatggtgccaataaattcactggatcagagctagccactctagtcaacaacctg
aatgatgcccaagacatcattgtctatcatgaacttgtacagccatcaggtaaaaattgg
tgtgaagaagacatggagaatggaggatgtgaatacctatgcctgccagcaccacagatt
aatgatcactctccaaaatatacctgttcctgtcccagtgggtacaatgtagaggaaaat
ggccgagactgtcaaagtactgcaactactgtgacttacagtgagacaaaagatacgaac
acaacagaaatttcagcaactagtggactagttcctggagggatcaatgtgaccacagca
gtatcagaggtcagtgttcccccaaaagggacttctgccgcatgggccattcttcctctc
ttgctcttagtgatggcagcagtaggtggctacttgatgtggcggaattggcaacacaag
aacatgaaaagcatgaactttgacaatcctgtgtacttgaaaaccactgaagaggacctc
tccatagacattggtagacacagtgcttctgttggacacacgtacccagcaatatcagtt
gtaagcacagatgatgatctagcttga

>gi568815589f:2522190_2752949|GENSCAN_predicted_peptide_3|113_aa
MKAYPRLGRKGGLMDLQFHVAGEASQSYQKNYMLDIQETHDPNWDNRNGFLEEETSEPRP
GRIRAGCLTDDSRQCTSTRAKCAHLASSRQQNGQQQQLALTQLSLLLPLPSPH

>gi568815589f:2522190_2752949|GENSCAN_predicted_CDS_3|342_bp
atgaaggcatacccgagactgggaagaaaaggaggtttaatggacttacagttccacgtg
gctggggaggcctcacaatcatatcagaagaattatatgctggatatacaagagactcat
gacccaaactgggacaacaggaatggcttcctggaagaagagacatctgagcccagacct
ggaagaataagagccggatgcttaacagacgacagcagacaatgcacctcaaccagggct
aagtgtgcacacttggccagcagccgccaacagaacgggcagcagcagcagttagcactg
acgcaactatcgctgctattgccactaccatctccccactaa

>gi568815589f:2522190_2752949|GENSCAN_predicted_peptide_4|73_aa
MHTYVHCSTIHNSKDVESTQVATKSGLDKENAVFTDASFEISKSPQEHHLAPVTPTPGSP
RHCSNASVRADVP

>gi568815589f:2522190_2752949|GENSCAN_predicted_CDS_4|222_bp
atgcacacctatgttcactgcagcactattcacaatagcaaagacgtggaatcaacccag
gtggccaccaaaagtggactggataaagaaaatgcagttttcacagatgcctcttttgaa
atcagcaaatctcctcaggagcatcatctggctcctgtcacccctactccagggagccct
cgtcactgcagtaatgccagtgtcagagcagatgttccataa

>gi568815589f:2522190_2752949|GENSCAN_predicted_peptide_5|662_aa
MLKQSERRRSWSYRPWNTTENEGSQHRRSICSLGARSGSQASIHGWTEGNYNYYIEEDED
GEEEDQWKDDLAEEDQQAGEVTTAKPEGPSDPPALLSTLNVNVGGHSYQLDYCELAGFPK
TRLGRLATSTSRSRQLSLCDDYEEQTDEYFFDRDPAVFQLVYNFYLSGVLLVLDGLCPRR
FLEELGYWGVRLKYTPRCCRICFEERRDELSERLKIQHELRAQAQVEEAEELFRDMRFYG
PQRRRLWNLMEKPFSSVAAKAIGVASSTFVLVSVVALALNTVEEMQQHSGQGEGGPDLRP
ILEHVEMLCMGFFTLEYLLRLASTPDLRRFARSALNLVDLVAILPLYLQLLLECFTGEGH
QRGQTVGSVGKVGQVLRVMRLMRIFRILKLARHSTGLRAFGFTLRQCYQQVGCLLLFIAM
GIFTFSAAVYSVEHDVPSTNFTTIPHSWWWAAVSTFALGFPILFPSPVSCSSLPWLSATR
LWLLILVFPPTPNRRIQLTKRRWMSKVVERELSRSVNSSSHMSMAVAKNKRENASPIMQT
LHKFLFMAFAQPIGQSKSHGQAASQRAGQVSISTVGYGDMYPETHLGRFFAFLCIAFGII
LNGMPISILYNKFSDYYSKLKAYEYTTIRRERGEVNFMQRARKKIAECLLGSNPQLTPRQ
EN

>gi568815589f:2522190_2752949|GENSCAN_predicted_CDS_5|1989_bp
atgctcaaacagagtgagaggagacggtcctggagctacaggccctggaacacgacggag
aatgagggcagccaacaccgcaggagcatttgctccctgggtgcccgttccggctcccag
gccagcatccacggctggacagagggcaactataactactacatcgaggaagacgaagac
ggcgaggaggaggaccagtggaaggacgacctggcagaagaggaccagcaggcaggggag
gtcaccaccgccaagcccgagggccccagcgaccctccggccctgctgtccacgctgaat
gtgaacgtgggtggccacagctaccagctggactactgcgagctggccggcttccccaag
acgcgcctaggtcgcctggccacctccaccagccgcagccgccagctaagcctgtgcgac
gactacgaggagcagacagacgaatacttcttcgaccgcgacccggccgtcttccagctg
gtctacaatttctacctgtccggggtgctgctggtgctcgacgggctgtgtccgcgccgc
ttcctggaggagctgggctactggggcgtgcggctcaagtacacgccacgctgctgccgc
atctgcttcgaggagcggcgcgacgagctgagcgaacggctcaagatccagcacgagctg
cgcgcgcaggcgcaggtcgaggaggcggaggaactcttccgcgacatgcgcttctacggc
ccgcagcggcgccgcctctggaacctcatggagaagccattctcctcggtggccgccaag
gccatcggggtggcctccagcaccttcgtgctcgtctccgtggtggcgctggcgctcaac
accgtggaggagatgcagcagcactcggggcagggcgagggcggcccagacctgcggccc
atcctggagcacgtggagatgctgtgcatgggcttcttcacgctcgagtacctgctgcgc
ctagcctccacgcccgacctgaggcgcttcgcgcgcagcgccctcaacctggtggacctg
gtggccatcctgccgctctaccttcagctgctgctcgagtgcttcacgggcgagggccac
caacgcggccagacggtgggcagcgtgggtaaggtgggtcaggtgttgcgcgtcatgcgc
ctcatgcgcatcttccgcatcctcaagctggcgcgccactccaccggactgcgtgccttc
ggcttcacgctgcgccagtgctaccagcaggtgggctgcctgctgctcttcatcgccatg
ggcatcttcactttctctgcggctgtctactctgtggagcacgatgtgcccagcaccaac
ttcactaccatcccccactcctggtggtgggccgcggtgagtacctttgccctgggcttt
cccatcctcttccccagcccagtgagctgctcctccctcccctggttatcagccaccagg
ctttggcttctgatcctcgtcttcccccccacccccaatcgccgcatacagctaacaaaa
cggcgatggatgtcaaaagtggtggaaagagaactcagcagatcagtaaactccagcagc
cacatgtcgatggctgtggcaaagaacaagagagagaatgcaagccccatcatgcaaaca
cttcataagtttcttttcatggcatttgctcagcccattggccagagtaagtcacatggc
caagctgcaagtcaaagggcagggcaggtgagcatctccaccgtgggctacggagacatg
tacccagagacccacctgggcaggttttttgccttcctctgcattgcttttgggatcatt
ctcaacgggatgcccatttccatcctctacaacaagttttctgattactacagcaagctg
aaggcttatgagtataccaccatacgcagggagaggggagaggtgaacttcatgcagaga
gccagaaagaagatagctgagtgtttgcttggaagcaacccacagctcaccccaagacaa
gagaattag

>gi568815589f:2522190_2752949|GENSCAN_predicted_peptide_6|85_aa
MVELAAFDRRDESFIGTEVCRLSFPINHLYDLDEENQQGSVGYSRVGNSGRPLLLIGLRE
QQEGKVFLGPVNAVVKQGYSTEPRL

>gi568815589f:2522190_2752949|GENSCAN_predicted_CDS_6|258_bp
atggtggagctggcagcctttgacaggagagatgaatcatttattggcactgaggtatgc
cgattatcatttcctatcaatcatctgtatgatctggatgaagagaaccaacaaggctcg
gtaggatattcgagagttggcaacagtgggaggccattactactcataggcctgagggaa
caacaggagggaaaggtgtttctaggacctgtaaatgctgtggttaaacaaggctactca
actgagccacggctgtag

>gi568815589f:2522190_2752949|GENSCAN_predicted_peptide_7|301_aa
MVPSTLEKKVAAGNDTVRLGEIPKLQSTSTPASVQALDAIVRRNSRMSQKIVKAWRYTAK
QNVHTQGSAGLLKSHTQRGLGLLPLWVSLTKGWNIHENSWKKVEISQNGSATHFYTKYGS
SRNFHGTGSLINVLKTTPPPLLTPTLPPPIRGLCSHAEYKQDLDHKAGEGTNPADTVILD
FQIPELGNKFLLFKPSSLCYFVTVVLANEYKVTGCRQHKTASGVIISRDNIRTQIPLPSK
PEVPRPQIADWYWSMACYELGYPAGGEQVRKASSVFTAAPHHSHYCLSFSSCQISGGIRF
S

>gi568815589f:2522190_2752949|GENSCAN_predicted_CDS_7|906_bp
atggtcccttccactttagaaaaaaaagttgcagctggaaatgatactgttaggctggga
gagatccccaaactccagagcacttcaaccccagccagtgtccaggctcttgacgctatc
gtgagaaggaattcaaggatgagtcagaaaatagtgaaagcatggagatatactgcgaag
caaaacgtacacactcaggggagtgcaggcctactcaagagtcacacgcaacggggtttg
gggctgctacccttatgggtttctttaaccaaggggtggaacattcatgaaaattcctgg
aaaaaggtggaaatttctcagaacggcagtgccacccatttttataccaaatatgggtct
tcccggaactttcatggcactggaagcctcatcaatgtgctgaagaccacccctcctcca
ctcctcactcccacactcccacccccaattagaggcctctgcagccatgctgagtataag
caggatttggatcacaaagcaggggaaggaaccaatcctgctgacacagtgatcttggac
ttccaaattccagaactgggaaataaatttctgttgtttaagccatccagcttgtgctac
tttgttacagtggtcctagcaaatgaatacaaggtcactggatgtcgtcagcacaaaact
gccagtggggttatcattagcagagataacatccgaactcaaattcctttaccctctaaa
ccagaggtccccagaccccagattgcggactggtactggtccatggcctgttatgaactg
ggctaccccgcaggaggtgaacaggtccgcaaagcttcatctgtgtttacagctgctccc
catcactcacattactgcctgagcttctcctcctgtcagatcagcggtggcattagattc
tcctag