GENSCAN 1.0	Date run:  3-Nov-116	Time: 12:35:06

Sequence gi568815592r:37537371_37796811 : 259441 bp : 50.43% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.05 PlyA -    741    736    6                               1.05
 1.04 Term -   2254   2077  178  0  1  139   54   111 0.758   9.96
 1.03 Intr -   8428   8377   52  2  1   98   95    35 0.613   3.17
 1.02 Intr -  10814  10480  335  1  2  101   53    74 0.567   0.41
 1.01 Init -  11376  11150  227  0  2   92  107    64 0.580   6.64
 1.00 Prom -  18085  18046   40                              -4.26

 2.28 PlyA -  23644  23639    6                               1.05
 2.27 Term -  30660  30355  306  0  0   84   55   110 0.012   2.42
 2.26 Intr -  46205  46098  108  2  0   46   50    93 0.072   1.78
 2.25 Intr -  48722  48632   91  1  1   44   78   101 0.086   4.70
 2.24 Intr -  54953  54824  130  0  1   45  -12   356 0.140  21.05
 2.23 Intr -  56360  56291   70  2  1   93  115   -36 0.412  -1.65
 2.22 Intr -  61483  61404   80  2  2   73   99    47 0.390   3.57
 2.21 Intr -  67669  67562  108  2  0   48  106    57 0.006   3.76
 2.20 Intr -  90338  90158  181  2  1   39   93    42 0.002  -0.76
 2.19 Intr -  96830  96804   27  2  0  118   53    38 0.155   1.61
 2.18 Intr -  97505  97403  103  1  1  108   44    84 0.810   6.18
 2.17 Intr -  98436  98349   88  1  1    8   73   111 0.859   0.63
 2.16 Intr - 100943 100817  127  2  1   75   59   138 0.788   9.85
 2.15 Intr - 101297 101167  131  0  2  101  109   139 0.999  17.71
 2.14 Intr - 106573 106439  135  2  0   93  109   164 0.991  19.54
 2.13 Intr - 107279 107127  153  0  0   45   72   237 0.999  17.84
 2.12 Intr - 108706 108563  144  2  0   96   94     3 0.660   1.95
 2.11 Intr - 109005 108828  178  0  1   37   44   310 0.969  20.99
 2.10 Intr - 109954 109803  152  2  2   87   80   306 0.987  29.58
 2.09 Intr - 111896 111612  285  0  0   76  105   557 0.999  53.51
 2.08 Intr - 113035 112739  297  2  0   88   65   490 0.972  43.55
 2.07 Intr - 114970 114641  330  2  0   74   80   510 0.970  44.40
 2.06 Intr - 117173 116904  270  0  0  105   57   286 0.988  24.71
 2.05 Intr - 117562 117430  133  1  1   45   59   278 0.927  20.82
 2.04 Intr - 118526 118330  197  0  2   94   71   309 0.999  28.93
 2.03 Intr - 121049 120875  175  2  1   67   65   442 0.987  39.31
 2.02 Intr - 126736 126597  140  2  2  107  115   167 0.974  21.48
 2.01 Init - 158989 158779  211  1  1   36  -24   304 0.581  10.95
 2.00 Prom - 165836 165797   40                              -6.46

 3.00 Prom + 174291 174330   40                              -1.76
 3.01 Init + 184205 184315  111  1  0   67   89    38 0.176   2.01
 3.02 Intr + 187543 187761  219  0  0   61   92    68 0.174   3.00
 3.03 Intr + 191753 191884  132  1  0   27   98    51 0.112   0.84
 3.04 Term + 194520 194591   72  2  0   99   51    63 0.870   1.61
 3.05 PlyA + 195892 195897    6                               1.05

 4.00 Prom + 203037 203076   40                              -1.46
 4.01 Init + 207190 207296  107  0  2   71   41   113 0.271   4.59
 4.02 Term + 218363 218579  217  2  1   95   49    95 0.038   2.92
 4.03 PlyA + 223838 223843    6                               1.05

 5.04 PlyA - 228443 228438    6                               1.05
 5.03 Term - 240851 240798   54  2  0  122   52    47 0.504   2.06
 5.02 Intr - 246635 246526  110  0  2   67   88    86 0.533   6.50
 5.01 Init - 254710 254656   55  1  1   78   77    35 0.416   2.85

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  47940  47856   85  0  1   50   81   135 0.868   7.98
S.002 Term -  54953  54820  134  0  2   45   37   338 0.855  22.65


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592r:37537371_37796811|GENSCAN_predicted_peptide_1|263_aa
MPGCFRHLQTQMQTSEDTPQPVPEGSKMGSRVQSWTQSQDPKLSALFPRGPGDSREKPEA
QSQLRELARQGCGMQRRGAEGRLTLAPDAAELDFSALIVGCHLCKAGWTHQPQRVVNLQP
VLLLVHTRPEQPQPPTPQSPAEEYANTPQNKFQLEFLPSCFRQLHPSKPWPPLSTSSNWQ
TSKERQDSGPQDRALKGLVETGKTWPGILIISISDVTGLGGEEATPLQGKLKTEIFSHAA
GKWGEQRKGAQEPLRGSVLEAFQ

>gi568815592r:37537371_37796811|GENSCAN_predicted_CDS_1|792_bp
atgccaggctgtttcaggcacctgcagacccagatgcagacatctgaggacacaccacaa
ccagtccctgaggggagcaagatggggagcagggtgcagagctggacacaaagccaggac
cccaaactcagcgctctgttcccacgtgggccaggagactcaagagaaaaacctgaggcc
caatcccagctgcgtgaactggctcgacaaggctgcgggatgcagaggagaggggcagaa
gggaggctaaccctggctccagatgcagctgagctagatttttctgccctgatcgtgggc
tgccatctgtgcaaggctggttggacccaccagcctcagagggtggttaatttacaacct
gtgctgctgcttgtccacaccaggccagagcagcctcaacccccaacccctcagtctcca
gcagaagaatatgcgaacactcctcagaacaagttccagctcgagttccttccttcctgc
ttccgtcaactccatccctccaagccttggcctcccctcagcacctcatccaactggcaa
acttccaaggagaggcaggacagtgggccacaggatagagcattaaagggcctggtagaa
actggaaagacctggcccgggatattgatcatctccatcagtgatgtcacaggactgggt
ggggaggaggccactcccctgcaggggaagctgaagacagagatcttcagccatgcagcc
gggaagtggggagagcagaggaagggggcccaggagcccctccgagggtctgtgctggag
gctttccagtga

>gi568815592r:37537371_37796811|GENSCAN_predicted_peptide_2|1449_aa
MSRSCRAACGRAGCQHQGRAAGSPSPLLLRLRFFYSGLDTLIRMPASPGPGAFDPGIPFR
TFPEPVLPVPAPAQAQIVHAGQACVVKEDNISERVYTIREGDTLMLQCLVTGHPRPQVRW
TKTAGSASDKFQETSVFNETLRIERIARTQGGRYYCKAENGVGVPAIKSIRVDVQYLDEP
MLTVHQTVSDVRGNFYQEKTVFLRCTVNSNPPARFIWKRGSDTLSHSQDNGVDIYEPLYT
QGETKVLKLKNLRPQDYASYTCQVSVRNVCGIPDKAITFRLTNTTAPPALKLSVNETLVV
NPGENVTVQCLLTGGDPLPQLQWSHGPGPLPLGALAQGGTLSIPSVQARDSGYYNCTATN
NVGNPAKKTVNLLVRSMKNATFQITPDVIKESENIQLGQDLKLSCHVDAVPQEKVTYQWF
KNGKPARMSKRLLVTRNDPELPAVTSSLELIDLHFSDYGTYLCMASFPGAPVPDLSVEVN
ISSETVPPTISVPKGRAVVTVREGSPAELQCEVRGKPRPPVLWSRVDKEAALLPSGLPLE
ETPDGKLRLERVSRDMSGTYRCQTARYNGFNVRPREAQVQLNVQFPPEVEPSSQDVRQAL
GRPVLLRCSLLRGSPQRIASAVWRFKGQLLPPPPVVPAAAEAPDHAELRLDAVTRDSSGS
YECSVSNDVGSAACLFQVSAKAYSPEFYFDTPNPTRSHKLSKNYSYVLQWTQREPDAVDP
VLNYRLSIRQLNQHNAVVKAIPVRRVEKGQLLEYILTDLRVPHSYEVRLTPYTTFGAGDM
ASRIIHYTERQIRWPPVLALRTLSSGPKQGILCRAPHLSSDLVSPLAFSAINSPNLSDNT
CHFEDEKICGYTQDLTDNFDWTRQNALTQNPKRSPNTGPPTDISGTPEGYYMFIETSRPR
ELGDRARLVSPLYNASAKFYCVSFFYHMYGKHIGSLNLLVRSRNKGALDTHAWSLSGNKG
NVWQQAHVPISPSGPFQIIFEGVRGPGYLGDIAIDDVTLKKGECPRKQTDPNKGARREGA
ACDGLKFHLSSPMDDGELTDDPIECKHLWIHRVDSKGAQYMLAELNCIHVAPRFLVFMDE
GHKVGEKDSGGQPFQVYTDFSFYPHAIPEKMSIMPTLQVGKLRLREEEESAYGHTAAKAR
AGTRSWSLNRPPELKSFSLWTNMTQSVREPITGPLQCQTYTHSNTQHLGTWMKLETIILS
KLTQEQKTKHHMFSLTTQSAPPSLFSPELPLSSNSRGHASMSLDDDDDDDDDDDDDDDDD
DNDDDDGRKTYRIPPGSDLSACGWVNDHMSQGDSTGPPDEKHSYAKEETQAKLTGPGISY
PGKPSYRLHPSGYTPLEQFREKATGMLTGRTVSEVSALYLASYKASFLLAVVLIIGIQKW
TRQSHAQCVPRPFCFCASMSRAWGEKGAVERGFHSGNGMWGNQRHKGATVYQFLQETVLR
GNYTISATT

>gi568815592r:37537371_37796811|GENSCAN_predicted_CDS_2|4350_bp
atgagccggagttgccgcgcggcttgcgggcgagccggctgtcagcaccaaggccgggcg
gcgggctcgccttccccgctgttgctgcggcttcgcttcttctactcagggcttgacacc
ctgatcaggatgccggcatcccctggccctggcgccttcgaccccggcatcccttttcgg
accttccctgaaccagttcttcctgtccccgctccagcccaggcgcagatcgtgcatgcg
ggccaggcatgtgtggtgaaagaggacaatatcagcgagcgtgtctacaccatccgggag
ggggacaccctcatgctgcagtgccttgtaacagggcaccctcgaccccaggtacggtgg
accaagacggcaggtagcgcctcggacaagttccaggagacatcggtgttcaacgagacg
ctgcgcatcgagcgtattgcacgcacgcagggcggccgctactactgcaaggctgagaac
ggcgtgggggtgccggccatcaagtccatccgcgtggacgtgcagtacctggatgagcca
atgctgacggtgcaccagacggtgagcgatgtgcgaggcaacttctaccaggagaagacg
gtgttcctgcgctgtactgtcaactccaacccgcctgcccgcttcatctggaagcggggt
tccgataccctatcccacagccaggacaatggggttgacatctatgagcccctctacact
cagggggagaccaaggtcctgaagctgaagaacctgcggccccaggactatgccagctac
acctgccaggtgtctgtgcgtaacgtgtgcggcatcccagacaaggccatcaccttccgg
ctcaccaacaccacggcaccaccagccctgaagctgtctgtgaacgaaactctggtggtg
aaccctggggagaatgtgacggtgcagtgtctgctgacaggcggtgatcccctcccccag
ctgcagtggtcccatgggcctggcccactgcccctgggtgctctggcccagggtggcacc
ctcagcatcccttcagtgcaggcccgggactctggctactacaactgcacagccaccaac
aatgtgggcaaccctgccaagaagactgtcaacctgctggtgcgatccatgaagaacgct
acattccagatcactcctgacgtgatcaaagagagtgagaacatccagctgggccaggac
ctgaagctatcgtgccacgtggatgcagtgccccaggagaaggtgacctaccagtggttc
aagaatggcaagccggcacgcatgtccaagcggctgctggtgacccgcaatgatcctgag
ctgcccgcagtcaccagcagcctagagctcattgacctgcacttcagtgactatggcacc
tacctgtgcatggcttctttcccaggggcacccgtgcccgacctcagcgtcgaggtcaac
atctcctctgagacagtgccgcccaccatcagtgtgcccaagggtagggccgtggtgacc
gtgcgcgagggatcgcctgccgagctgcaatgcgaggtgcggggcaagccgcggccgcca
gtgctctggtcccgcgtggacaaggaggctgcactgctgccctcggggctgcccctggag
gagactccggacgggaagctgcggctggagcgagtgagccgagacatgagcgggacctac
cgctgccagacggcccgctataatggcttcaacgtgcgcccccgtgaggcccaggtgcag
ctgaacgtgcagttcccgccggaggtggagcccagttcccaggacgtgcgccaggcgctg
ggccggcccgtgctcctgcgctgctcgctgctgcgaggcagcccccagcgcatcgcctcg
gctgtgtggcgtttcaaagggcagctgctgccgccgccgcctgttgttcccgccgccgcc
gaggcgccggatcacgcggagctgcgcctcgacgccgtaactcgcgacagcagcggcagc
tacgagtgcagcgtctccaacgatgtgggctcggctgcctgcctcttccaggtctccgcc
aaagcctacagcccggagttttacttcgacacccccaaccccacccgcagccacaagctg
tccaagaactactcctacgtgctgcagtggactcagagggagcccgacgctgtcgaccct
gtgctcaactacagactcagcatccgccagttgaaccagcacaatgcggtggtcaaggcc
atcccggtccggcgtgtggagaaggggcagctgctggagtacatcctgaccgatctccgt
gtgccccacagctatgaggtccgcctcacaccctataccaccttcggggctggtgacatg
gcctcccgcatcatccactacacagagcgccagatccgctggcccccagtcctggctctg
aggaccctgtcctctggtcccaagcagggtatcctctgcagagccccacacctcagttct
gacttggtttccccgcttgctttctcagccatcaactctccgaacctttcagacaacacc
tgccactttgaggatgagaagatctgtggctatacccaggacctgacagacaactttgac
tggacgcggcagaatgccctcacccagaaccccaaacgctcccccaacactggtcccccc
accgacataagtggcacccctgagggctactacatgttcatcgagacatcgaggcctcgg
gagctgggggaccgtgcaaggttagtgagtcccctctacaatgccagcgccaagttctac
tgtgtctccttcttctaccacatgtacgggaaacacatcggctccctcaacctcctggtg
cggtcccggaacaaaggggctctggacacgcacgcctggtctctcagtggcaataagggc
aatgtgtggcagcaggcccatgtgcccatcagccccagtgggcccttccagattattttt
gagggggttcgaggcccgggctacctgggggatattgccatagatgacgtcacactgaag
aagggggagtgtccccggaagcagacggatcccaataaaggtgcaagacgggaaggagct
gcctgcgatggcctgaaattccacctttcatcccctatggatgacggagagcttacagat
gaccctattgaatgcaagcacctttggatccatagagtggacagtaaaggtgctcagtac
atgttggctgagctgaactgcatacatgtggcccccaggttcctggtctttatggacgaa
gggcacaaggttggtgaaaaggactccgggggccagcccttccaagtttacactgatttc
tccttttaccctcatgctatccctgagaagatgtcaataatgcccacgttacaggtggga
aaactgaggcttagagaggaggaggaatctgcctacggtcacacagctgcaaaggctaga
gctgggaccaggagctggtctcttaaccgaccacctgagctcaagagcttttctctctgg
accaacatgacccaaagtgtgcgcgagcctatcacaggtcccctgcaatgccaaacatac
acgcacagcaatacacaacacctggggacatggatgaagctggaaaccatcattctcagc
aaactgacacaagaacagaaaaccaaacaccacatgttctcactcaccacccagtctgcc
ccgccctctctcttctcacctgaacttcccctctcctcaaactctcgaggccacgcctct
atgtccttggatgatgatgatgacgacgacgacgatgatgatgatgatgatgacgacgat
gacaatgatgatgatgatggaaggaagacctacagaatccctccaggctctgacctcagt
gcttgtgggtgggtgaatgaccacatgtcgcagggagactccacaggtcctcccgatgag
aagcactcttatgccaaagaggagactcaggccaaactgacaggaccaggaattagctac
cctggtaaacccagctatcgactgcacccgagcggctacacaccactggagcagttcagg
gagaaagccaccggcatgctcaccggcagaactgtgagtgaagtttccgccctgtatctg
gcctcatacaaggcctccttcctgctggctgttgtgctaataattgggatacagaaatgg
acacgacagagccatgcccagtgtgtccccaggcccttctgcttttgtgcgagcatgagc
agggcatggggagagaagggggccgtggagagaggtttccactcaggaaacgggatgtgg
ggaaaccagaggcacaaaggagccacggtctaccagttcctccaggaaaccgtgctcagg
ggaaactatacaatatcagcaacaacatga

>gi568815592r:37537371_37796811|GENSCAN_predicted_peptide_3|177_aa
MGTVPVAHQVYQMFYRALCKYYPFQPGEVGVINPILVLDSGGVGKRRKKEKTGFVSSKDS
QPAGGDSIPGELRLPAGSHSNSAGPSWDGAAMGKQKPEPHFPTPEAGGKQAAPKGVHNFQ
EAMGPRIQGSSPKMEQFCVIISQYPQQWHKHPTQRKLLALDNSSRKKTTPRTLTRKA

>gi568815592r:37537371_37796811|GENSCAN_predicted_CDS_3|534_bp
atgggtacagttccagtggcccaccaggtataccagatgttttaccgggcactttgcaaa
tattacccttttcagcctggtgaagtaggtgttattaaccccattttagtgctggattca
ggtggagtagggaaaagacggaagaaagagaagacaggattcgtgtcctcaaaggattcc
cagcctgctgggggagacagcatccctggggagctgagattaccagcaggaagccacagc
aattctgctggcccaagttgggatggagctgcaatggggaaacagaagcctgagcctcat
tttcctaccccggaagctggaggaaagcaggccgcccccaagggggtgcataacttccag
gaagcgatgggtcccaggatccagggcagttctccaaagatggagcagttctgcgttatc
atcagtcaatatccacagcagtggcacaagcaccccacccagagaaagctcctggccctg
gataatagctccagaaagaagacaactccacggaccctgacaagaaaggcctga

>gi568815592r:37537371_37796811|GENSCAN_predicted_peptide_4|107_aa
MSAQGEEQMSGSPCPGGAPGLVRKVDAEEINHRTAQTRDAGQGGHCLQDPSAEVPHGAEV
GSRGRNSCENSDLFVSLSQAKVDNEAKLAITFLCVIMVVVVMLTAAG

>gi568815592r:37537371_37796811|GENSCAN_predicted_CDS_4|324_bp
atgagtgcccaaggagaggaacaaatgagtggcagtccctgtcctggaggagcccctggt
ctagtgcggaaagtggatgcagaagaaataaaccaccggaccgcacaaaccagggacgcc
ggacaaggaggacactgccttcaggacccttctgcggaggtccctcatggtgcagaagtt
gggagtagaggcagaaacagctgtgaaaattctgatttgtttgtttctctgagccaagct
aaagtggataatgaagccaagctggcgattaccttcctgtgcgtgataatggtggtagtg
gtgatgctgactgcagcaggatga

>gi568815592r:37537371_37796811|GENSCAN_predicted_peptide_5|72_aa
MPLILKSILKGDCEGYRVGGQKRLRALRRPTLSAISTARPGAARTLAFRNKKNDFEEKPG
GKEEELGDVGAL

>gi568815592r:37537371_37796811|GENSCAN_predicted_CDS_5|219_bp
atgcccctcattctcaagtccatcctaaaaggtgattgtgagggctacagggttggagga
cagaagaggctgcgcgccctccgcaggcccacgctgtccgccattagcacagcccggccc
ggcgctgctcgcacattagccttcaggaataaaaagaatgatttcgaagagaagccagga
ggcaaagaggaggagctgggagatgtgggggctctctga