GENSCAN 1.0	Date run:  3-Nov-116	Time: 12:50:21

Sequence gi568815595r:44985641_45246287 : 260647 bp : 46.29% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   3500   3601  102  1  0   35  105   157 0.940  12.47
 1.02 Intr +   3910   4004   95  0  2   75   65   103 0.997   5.46
 1.03 Intr +  11447  11612  166  2  1   74  105   168 0.999  17.06
 1.04 Intr +  15898  15968   71  0  2   85  115    37 0.999   4.08
 1.05 Intr +  19651  19774  124  1  1   59   70   137 0.916   9.59
 1.06 Intr +  21780  21935  156  2  0   96   78   212 0.994  21.21
 1.07 Term +  25595  25699  105  1  0  100   34    63 0.688   0.51
 1.08 PlyA +  27001  27006    6                               1.05

 2.04 PlyA -  27348  27343    6                               1.05
 2.03 Term -  30964  30888   77  2  2  114   42    63 0.583   2.30
 2.02 Intr -  36939  36741  199  0  1   73   53    84 0.371   2.32
 2.01 Init -  37190  37122   69  2  0   52  115    30 0.488   3.15
 2.00 Prom -  38379  38340   40                              -6.46

 3.00 Prom +  39640  39679   40                              -5.96
 3.01 Init +  40723  40831  109  0  1   93  116   208 0.997  22.48
 3.02 Intr +  45187  45285   99  2  0  117  100   198 0.999  23.98
 3.03 Term +  49884  50284  401  1  2   66   42   819 0.996  70.38
 3.04 PlyA +  50402  50407    6                               1.05

 4.00 Prom +  53411  53450   40                              -5.86
 4.01 Init +  59721  59950  230  2  2   39   64   235 0.838  14.04
 4.02 Intr +  62158  62245   88  1  1   57   65    24 0.573  -3.03
 4.03 Term +  62588  62710  123  1  0  102   48    94 0.697   5.18
 4.04 PlyA +  63132  63137    6                               1.05

 5.05 PlyA -  63893  63888    6                              -0.45
 5.04 Term -  64589  64431  159  2  0   98   42    72 0.329   1.54
 5.03 Intr -  67805  67679  127  1  1   91   37    96 0.087   5.48
 5.02 Intr -  91893  91752  142  1  1  105   80    22 0.541   2.51
 5.01 Init -  93174  93147   28  0  1   99  109    43 0.839   5.27
 5.00 Prom -  97698  97659   40                              -7.46

 6.12 PlyA -  97837  97832    6                               1.05
 6.11 Term - 100427  99998  430  1  1   95   32   377 0.994  27.57
 6.10 Intr - 103501 103414   88  2  1  107   50    34 0.945   0.53
 6.09 Intr - 105898 105533  366  2  0   89   82   375 0.996  32.12
 6.08 Intr - 108017 107637  381  0  0   62  116   430 0.989  38.08
 6.07 Intr - 109928 109707  222  0  0   96   33   266 0.937  20.00
 6.06 Intr - 125201 124833  369  0  0   70   73   527 0.730  44.48
 6.05 Intr - 126805 126443  363  2  0   73   55   223 0.146  12.66
 6.04 Intr - 132981 132772  210  1  0  101  111    73 0.938   9.78
 6.03 Intr - 142291 142210   82  1  1  106  107    16 0.305   4.51
 6.02 Intr - 154415 154276  140  0  2    4   83    87 0.047  -0.02
 6.01 Init - 160647 160566   82  0  1   97  109   149 0.806  17.03
 6.00 Prom - 162258 162219   40                              -6.66

 7.00 Prom + 164660 164699   40                              -3.66
 7.01 Init + 180482 180487    6  1  0   84   87     0 0.333   0.38
 7.02 Intr + 181877 181966   90  1  0   75   58    68 0.409   2.69
 7.03 Intr + 188997 189223  227  2  2   85   72   170 0.126  11.88
 7.04 Intr + 201350 201513  164  2  2  109   66    13 0.006   0.82
 7.05 Intr + 214424 214557  134  0  2   78  119    69 0.635   9.36
 7.06 Intr + 216699 216768   70  2  1   -4  116    52 0.231  -2.45
 7.07 Intr + 218484 218614  131  1  2   61  114    65 0.878   6.81
 7.08 Intr + 229519 229572   54  0  0   82   84    25 0.289   0.68
 7.09 Term + 230575 230697  123  0  0   60   53    66 0.251  -1.32
 7.10 PlyA + 231114 231119    6                               1.05

 8.02 PlyA - 232288 232283    6                               1.05
 8.01 Sngl - 240387 239485  903  0  0   70   46  1727 0.999 160.92

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr - 126729 126443  287  2  2   81   55   220 0.841  14.99


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595r:44985641_45246287|GENSCAN_predicted_peptide_1|272_aa
EDLRVDGRGCEDYRCVEVETDVVSNTSGSARVKLGHTDILVGVKAEMGTPKLEKPNEGYL
EFFVDCSASATPEFEGRGGDDLGTEIANTLYRIFNNKSSVDLKTLCISPREHCWVLYVDV
LLLECGGNLFDAISIAVKAALFNTRIPRVRVLEDEEGSKDIELSDDPYDCIRLSVENVPC
IVTLCKIGYRHVVDATLQEEACSLASLLVSVTSKGVVTCMRKVGKGSLDPESIFEMMETG
KRVGKVLHASLQSVVHKEESLGPKRQKVGFLG

>gi568815595r:44985641_45246287|GENSCAN_predicted_CDS_1|819_bp
gaagacctccgtgtggatggccgtggctgtgaggactaccgatgtgtcgaagtggaaact
gatgtggtgtccaacactagtgggtccgccagggtcaagctgggtcacacagacatcttg
gtgggagtgaaagcagaaatggggacgccgaagctggagaaaccaaatgaaggctacttg
gagttctttgttgactgttcagccagtgctacccctgaatttgaaggtagaggaggtgat
gaccttggcaccgagatcgctaacaccctctatcggatatttaacaataaaagcagtgtc
gacttaaagaccctctgcattagtcctcgggagcactgctgggttctctatgtggatgtg
ctgcttctggaatgtggtggaaatttgtttgatgccatttccattgctgtaaaggctgct
ctcttcaatacaaggataccaagggttcgagttttggaggatgaagaggggtcgaaggac
attgaattgtcagatgacccttatgactgcatacgactaagtgtggagaatgtcccctgc
attgtcactctgtgcaagattggctatcggcatgtggtggatgctactcttcaggaggag
gcctgctcgctggccagcttgctggtgtcggtgaccagcaagggagttgtgacgtgcatg
aggaaagtggggaagggcagcctggacccagagagcatcttcgagatgatggagactggc
aagcgtgtgggcaaggtactgcatgcctccttgcagagtgttgtgcacaaggaagaaagc
ctggggcccaagagacagaaagttggattcctgggatga

>gi568815595r:44985641_45246287|GENSCAN_predicted_peptide_2|114_aa
MSTFTHHSLTHSEQLPVLQAPFMVSSSITFSWEHKPYCELCMRRSRLHTPYENLTPNDLR
WNSFILKPSPQPRIRGKIVFHETSPWCQKGPCPTSQVTPYYPGIHVYPYPFVQT

>gi568815595r:44985641_45246287|GENSCAN_predicted_CDS_2|345_bp
atgtccacgttcactcaccactcactgactcactcagagcaacttccagtcctgcaagct
ccattcatggtcagcagcagcattacattctcatgggagcacaagccctattgtgaactg
tgcatgagaaggtctaggttgcacactccttatgagaatctaacgcccaatgatctgagg
tggaacagtttcatcctgaaaccatcaccccaaccccgcatccgtgggaaaattgtcttc
catgaaaccagtccctggtgccaaaaaggcccttgtccaactagccaagttactccctac
tatccgggaatccacgtgtacccttatccctttgtgcaaacttaa

>gi568815595r:44985641_45246287|GENSCAN_predicted_peptide_3|202_aa
MELWGAYLLLCLFSLLTQVTTEPPTQKPKKIVNAKKDVVNTKMFEELKSRLDTLAQEVAL
LKEQQALQTVCLKGTKVHMKCFLAFTQTKTFHEASEDCISRGGTLGTPQTGSENDALYEY
LRQSVGNEAEIWLGLNDMAAEGTWVDMTGARIAYKNWETEITAQPDGGKTENCAVLSGAA
NGKWFDKRCRDQLPYICQFGIV

>gi568815595r:44985641_45246287|GENSCAN_predicted_CDS_3|609_bp
atggagctctggggggcctacctcctcctctgcctcttctccctcctgacccaggtcacc
accgagccaccaacccagaagcccaagaagattgtaaatgccaagaaagatgttgtgaac
acaaagatgtttgaggagctcaagagccgtctggacaccctggcccaggaggtggccctg
ctgaaggagcagcaggccctgcagacggtctgcctgaaggggaccaaggtgcacatgaaa
tgctttctggccttcacccagacgaagaccttccacgaggccagcgaggactgcatctcg
cgcgggggcaccctgggcacccctcagactggctcggagaacgacgccctgtatgagtac
ctgcgccagagcgtgggcaacgaggccgagatctggctgggcctcaacgacatggcggcc
gagggcacctgggtggacatgaccggcgcccgcatcgcctacaagaactgggagactgag
atcaccgcgcaacccgatggcggcaagaccgagaactgcgcggtcctgtcaggcgcggcc
aacggcaagtggttcgacaagcgctgccgcgatcagctgccctacatctgccagttcggg
atcgtgtag

>gi568815595r:44985641_45246287|GENSCAN_predicted_peptide_4|146_aa
MELEKKKLTVGRWMLLLFEVLDMQPEERSDRELIYINDNSACGKKDKDVLEEMMPAKNHE
KEFLEIFCDIESKKDKICDSQKCLQTSPNVPWGEKLPPVEKLRTTEENLNGFKDSKKVVV
AAEANMAMEGTTQIPLTEPAARSRVD

>gi568815595r:44985641_45246287|GENSCAN_predicted_CDS_4|441_bp
atggagttagaaaagaaaaagctgactgtgggaaggtggatgctgctgctgtttgaagtt
ctggatatgcaaccagaggaacgtagtgaccgtgagcttatctacataaatgacaacagt
gcctgtggcaaaaaggataaagatgtcctggaggaaatgatgccagcaaaaaaccacgaa
aaggaattcttagagatattttgtgacattgaaagcaagaaagataaaatctgtgatagc
caaaaatgtctgcagaccagtccaaatgtcccctggggggaaaaattacccccagttgag
aagctgagaaccactgaggagaacttaaatggattcaaagactcaaaaaaagtggtagtg
gcagctgaagccaatatggccatggagggcaccactcagatccctttaacagaacctgct
gcaaggagcagagtggactga

>gi568815595r:44985641_45246287|GENSCAN_predicted_peptide_5|151_aa
MARLKLLTSGSTPCGSCQALGLAPFEATAHALHWPLSAIAEVAGMQGTKSLDCTQHRNAE
GQSSSQVIDFASVRDKHTSAFTFSPNLCIENYQTFSNSNFSGPSVFSSTHYKSNSPVSPT
RAACVFRMLATVHGLFSVLIGLELVLQPCEG

>gi568815595r:44985641_45246287|GENSCAN_predicted_CDS_5|456_bp
atggccaggctcaaactcctgacctcaggctcaacaccatgtggaagctgccaagccctg
ggacttgcaccctttgaagccacagcccacgctctacattggcccctttcagccatagct
gaagtggctgggatgcagggcaccaagtccctagactgcacacagcacaggaatgctgaa
ggccagagcagctcacaggttatagattttgcatctgtaagagacaagcacacctcagca
ttcaccttcagcccaaacctctgcatagagaactaccagacctttagcaacagcaacttc
tcaggaccttcggtcttctcctcaactcactataagtccaactcaccagtgtctcccacc
cgtgcagcatgtgttttccgtatgctggccactgtacatggcttgttctcggtcttgatt
ggtttggaacttgttttacagccctgtgaaggttaa

>gi568815595r:44985641_45246287|GENSCAN_predicted_peptide_6|910_aa
MAGLNCGVSIALLGVLLLGAARLPRGAEMPSVTDLEAGTSGHFKQGSLAKTMFNPENSLE
QTSSFWDITENAEVTCNSSLKAFPQLGLTAVPCPSFFLGESEAFEIALPRESNITVLIKL
GTPTLLAKPCYIVISKRHITMLSIKSGERIVFTFSCQSPENHFVIEIQKNIDCMSGPCPF
GEVQLQPSTSLLPTLNRTFIWDVKAHKSIGLELQFSIPRLRQIGPGESCPDGVTHSISGR
IDATVVRIGTFCSNGTVSRIKMQEGVKMALHLPWFHPRNVSGFSIANRSSIKRLCIIESV
FEGEGSATLMSANYPEGFPEDELMTWQFVVPAHLRASVSFLNFNLSNCERKEERVEYYIP
GSTTNPEVFKLEDKQPGNMAGNFNLSLQGCDQDAQSPGILRLQFQVLVQHPQNESNKIYV
VDLSNERAMSLTIEPRPVKQSRKFVPGCFVCLESRTCSSNLTLTSGSKHKISFLCDDLTR
LWMNVEKTISCTDHRYCQRKSYSLQVPSDILHLPVELHDFSWKLLVPKDRLSLVLVPAQK
LQQHTHEKPCNTSFSYLVASAIPSQDLYFGSFCPGGSIKQIQVKQNISVTLRTFAPSFQQ
EASRQGLTVSFIPYFKEEGVFTVTPDTKSKVYLRTPNWDRGLPSLTSVSWNISVPRDQVA
CLTFFKERSGVVCQTGRAFMIIQEQRTRAEEIFSLDEDVLPKPSFHHHSFWVNISNCSPT
SGKQLDLLFSVTLTPRTVDLTVILIAAVGGGVLLLSALGLIICCVKKKKKKTNKGPAVGI
YNDNINTEMPRQPKKFQKGRKDNDSHVYAVIEDTMVYGHLLQDSSGSFLQPEVDTYRPFQ
GTMGVCPPSPPTICSRAPTAKLATEEPPPRSPPESESEPYTFSHPNNGDVSSKDTDIPLL
NTQEPMEPAE

>gi568815595r:44985641_45246287|GENSCAN_predicted_CDS_6|2733_bp
atggccggcctgaactgcggggtctctatcgcactgctaggggttctgctgctgggtgcg
gcgcgcctgccgcgcggggcagagatgccttctgttactgatctggaggcgggaacatct
ggccatttcaaacaaggaagtttggctaaaacaatgtttaaccccgagaacagcttagag
cagacaagcagtttctgggacatcacagagaatgcagaggtgacctgcaacagtagcctg
aaagcatttcctcagcttggcctgacggctgtaccttgccccagcttctttctaggggag
tctgaagcttttgagattgctctgccacgagaaagcaacattacagttctcataaagctg
gggaccccgactctgctggcaaaaccctgttacatcgtcatttctaaaagacatataacc
atgttgtccatcaagtctggagaaagaatagtctttacctttagctgccagagtcctgag
aatcactttgtcatagagatccagaaaaatattgactgtatgtcaggcccatgtcctttt
ggggaggttcagcttcagccctcgacatcgttgttgcctaccctcaacagaactttcatc
tgggatgtcaaagctcataagagcatcggtttagagctgcagttttccatccctcgcctg
aggcagatcggtccgggtgagagctgcccagacggagtcactcactccatcagcggccga
atcgatgccaccgtggtcaggatcggaaccttctgcagcaatggcactgtgtcccggatc
aagatgcaagaaggagtgaaaatggccttacacctcccatggttccaccccagaaatgtc
tccggcttcagcattgcaaaccgctcatctataaaacgtctgtgcatcatcgagtctgtg
tttgagggtgaaggctcagcaaccctgatgtctgccaactacccagaaggcttccctgag
gatgagctcatgacgtggcagtttgtcgttcctgcacacctgcgggccagcgtctccttc
ctcaacttcaacctctccaactgtgagaggaaggaggagcgggttgaatactacatcccg
ggctccaccaccaaccccgaggtgttcaagctggaggacaagcagcctgggaacatggcg
gggaacttcaacctctctctgcaaggctgtgaccaagatgcccaaagtccagggatcctc
cggctgcagttccaagttttggtccaacatccacaaaatgaaagcaataaaatctacgtg
gttgacttgagtaatgagcgagccatgtcactcaccatcgagccacggcccgtcaaacag
agccgcaagtttgtccctggctgtttcgtgtgtctagaatctcggacctgcagtagcaac
ctcaccctgacatctggctccaaacacaaaatctccttcctttgtgatgatctgacacgt
ctgtggatgaatgtggaaaaaaccataagctgcacagaccaccggtactgccaaaggaaa
tcctactcactccaggtgcccagtgacatcctccacctgcctgtggagctgcatgacttc
tcctggaagctgctggtgcccaaggacaggctcagcctggtgctggtgccagcccagaag
ctgcagcagcatacacacgagaagccctgcaacaccagcttcagctacctcgtggccagt
gccatacccagccaggacctgtacttcggctccttctgcccgggaggctctatcaagcag
atccaggtgaagcagaacatctcggtgacccttcgcacctttgcccccagcttccaacaa
gaggcctccaggcagggtctgacggtgtcctttataccttatttcaaagaggaaggcgtt
ttcacggtgacccctgacacaaaaagcaaggtctacctgaggacccccaactgggaccgg
ggcctgccatccctcacctctgtgtcctggaacatcagcgtgcccagagaccaggtggcc
tgcctgactttctttaaggagcggagcggcgtggtctgccagacagggcgcgcattcatg
atcatccaggagcagcggacccgggctgaggagatcttcagcctggacgaggatgtgctc
cccaagccaagcttccaccatcacagcttctgggtcaacatctctaactgcagccccacg
agcggcaagcagctagacctgctcttctcggtgacacttaccccaaggactgtggacttg
actgtcatcctcatcgcagcggtgggaggtggagtcttactgctgtctgccctcgggctc
atcatttgctgtgtgaaaaagaagaaaaagaagacaaacaagggccccgctgtgggtatc
tacaatgacaacatcaatactgagatgccgaggcagccaaaaaagtttcagaaagggcga
aaggacaatgactcccatgtgtatgcagtcatcgaggacaccatggtatatgggcatctg
ctacaggattccagcggctccttcctgcagccagaggtggacacctaccggccgttccag
ggcaccatgggggtctgtcctccctccccacccaccatatgctccagggccccaactgca
aagttggccactgaggagccacctcctcgctcccctcctgagtctgagagtgaaccgtac
accttctcccatcccaacaatggggatgtaagcagcaaggacacagacattcccttactg
aacactcaggagcccatggagccagcagaataa

>gi568815595r:44985641_45246287|GENSCAN_predicted_peptide_7|332_aa
MIEAASLVFHVLRIEAHFLLLFVPPAGPGPQMIPLIPEGLLVHKPKWLGPLYCSLDLLHG
SFLLRDPLKLALGLPISTWFQAVFTSVSYAAFESEEADQALYFLLRERNESGSVHGPSRG
WGAGSSVAVRLGTECGEPNSMGWLPVQTCCDGHLWSSGAAVPGKQTGGQMLCKVGERKED
EWTSTQGKALREYFPSPQECKDTPTSLALNIRGNFDKLGYTKFKNFQPSEADLDRTLPNG
ALSSPEGIFLRLIEEAKELRAAETRNRGRVRKSRRRRRKLKLQPNSSCMAGQLLEQHYTG
AISFLLIGSQNSFSDQRHQINPGNTKPFAVMT

>gi568815595r:44985641_45246287|GENSCAN_predicted_CDS_7|999_bp
atgattgaagcggcatcacttgtttttcatgtcctgcgcatcgaggcacactttctgctc
ctctttgtgccgccagccggcccaggcccacagatgatacctctaataccagagggtctg
ctggtccataaacccaagtggctgggccccttgtactgcagcctggacctgctgcacggc
tctttcctgctcagggacccgctcaagctggctctgggcctgcccatcagtacctggttc
caagcagtattcacaagtgtgtcatatgcagccttcgagtctgaagaagctgaccaggca
ttatacttccttcttagggagaggaatgagtctggtagtgtccatggcccaagtcgggga
tggggagctggttccagcgtggctgtgaggttgggcactgagtgtggggaacccaacagc
atggggtggctccctgtgcagacctgctgtgatgggcatctctggtcttcaggagctgca
gtgccaggtaagcagacaggaggacagatgttgtgtaaggttggggaacgcaaggaagat
gaatggacttcaacacaaggaaaggctctcagggaatactttccaagcccgcaggaatgt
aaggacactcccacatcgctggcattaaacatcaggggaaattttgataaattgggctac
actaaatttaagaacttccaaccatcagaagctgatttggatcgcacactccctaatggg
gccctttcttctcctgaaggcatcttcctgagacttatagaagaagccaaggagctgaga
gcagcagagacaagaaacagagggagagtgagaaagtcccggaggaggagacggaagctc
aagctgcagccaaacagctcatgcatggcagggcagctcttggagcagcattacacggga
gcaatatccttcctgctaattggatctcagaattcattttcggaccaaagacatcaaata
aacccaggaaatacgaagccgtttgcagttatgacttga

>gi568815595r:44985641_45246287|GENSCAN_predicted_peptide_8|300_aa
MLPLLAALLAAACPLPPVRGGAADAPGLLGVPSNASVNASSADEPIAPRLLASAAPGPPE
RPGPEEAAAAAAPCNISVQRQMLSSLLVRWGRPRGFQCDLLLFSTNAHGRAFFAAAFHRV
GPPLLIEHLGLAAGGAQQDLRLCVGCGWVRGRRTGRLRPAAAPSAAAATAGAPTALPAYP
AAEPPGPLWLQGEPLHFCCLDFSLEELQGEPGWRLNRKPIESTLVACFMTLVIVVWSVAA
LIWPVPIIAGFLPNGMEQRRTTASTTAATPAAVPAGTTAAAAAAAAAAAAAAVTSGVATK

>gi568815595r:44985641_45246287|GENSCAN_predicted_CDS_8|903_bp
atgctgcccctgctcgccgcgctcctggccgccgcctgcccgctgccgcccgtccgcggc
ggggccgcggacgcgcccggcctcctcggggtgccctccaatgcttcagtcaacgcgtcc
tccgcggacgagcccatcgccccgcggctgctggcctcggcggcccccgggccccccgag
cgcccgggcccggaggaggcggcggcggcggcggcgccgtgcaacatcagcgtgcagcgg
cagatgctgagctcgctgctcgtgcgctggggccgcccgcggggcttccagtgcgaccta
ctgctcttctccaccaacgcgcacggccgcgctttcttcgccgccgccttccaccgcgtc
gggccgccgctgctcatcgagcacctggggctggcggcgggcggcgcgcagcaggacctg
cgcctctgcgtgggctgcggctgggtgcgcggtcgccgcaccggccgcctccggcccgcc
gccgcccccagcgccgccgccgccaccgccggggcgcccaccgcgctgccagcctacccc
gcggccgagccgcccgggccgctgtggctgcagggcgagccgctgcatttctgctgccta
gacttcagcctggaggagctgcagggcgagccgggctggcggctgaaccgtaagcccatt
gagtccacgctggtggcctgcttcatgaccctggtcatcgtggtgtggagcgtggccgcc
ctcatctggccggtgcccatcatcgccggcttcctgcccaacggcatggaacagcgccgg
accaccgccagcaccaccgcagccacccccgccgcagtgcccgcagggaccaccgcagcc
gccgccgccgccgccgctgccgccgccgccgcggccgtcacttcgggggtggcgaccaag
tga