GENSCAN 1.0	Date run:  3-Nov-116	Time: 13:00:33

Sequence gi568815593f:69000806_69229614 : 228809 bp : 42.44% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   4822   4972  151  0  1   90   92    68 0.565   7.66
 1.02 Intr +   5533   5635  103  2  1   28   74    23 0.127  -6.79
 1.03 Term +  10611  10776  166  0  1   29   48   202 0.447   6.71
 1.04 PlyA +  12012  12017    6                               1.05

 2.06 PlyA -  12796  12791    6                               1.05
 2.05 Term -  13454  13110  345  2  0    4   45   791 0.674  59.91
 2.04 Intr -  31523  31392  132  2  0   59  -12   140 0.005   1.02
 2.03 Intr -  33103  33018   86  2  2   79  107     2 0.089  -0.18
 2.02 Intr -  35545  35424  122  0  2   96   47    57 0.096   1.62
 2.01 Init -  45901  45837   65  1  2   77   65    43 0.008   1.57
 2.00 Prom -  60542  60503   40                              -6.55

 3.00 Prom +  60564  60603   40                              -6.05
 3.01 Init +  61654  61960  307  0  1   68   44   134 0.291   4.50
 3.02 Term +  68411  68523  113  0  2   62   54   125 0.600   4.24
 3.03 PlyA +  70435  70440    6                               1.05

 4.00 Prom +  72882  72921   40                              -4.65
 4.01 Init +  73529  73628  100  1  1   55   59    99 0.284   4.18
 4.02 Term +  73979  74562  584  0  2   20   47   377 0.990  20.47
 4.03 PlyA +  75622  75627    6                               1.05

 5.00 Prom +  81710  81749   40                              -4.95
 5.01 Init +  93451  93533   83  0  2   86   99   150 0.589  16.41
 5.02 Intr +  93675  93803  129  0  0   95   57    44 0.143   0.89
 5.03 Intr + 107544 107631   88  0  1   88   70    64 0.812   3.65
 5.04 Intr + 114432 114602  171  2  0   80   94    96 0.982   8.62
 5.05 Intr + 115121 115384  264  1  0   95   67   127 0.926   8.09
 5.06 Intr + 116434 116591  158  0  2   57   69    97 0.684   2.59
 5.07 Intr + 117694 117823  130  1  1   95   98     5 0.680   1.98
 5.08 Intr + 120889 121090  202  0  1   61   84    51 0.672  -0.06
 5.09 Intr + 122394 122620  227  1  2   94   79   123 0.972   8.78
 5.10 Intr + 127199 127327  129  1  0  100   89    65 0.976   7.77
 5.11 Intr + 128642 128808  167  1  2   73   47   100 0.034   2.24
 5.12 Intr + 151336 151462  127  1  1   56   64    61 0.011   0.26
 5.13 Intr + 166106 166383  278  1  2   71   28   156 0.080   3.29
 5.14 Intr + 166388 166478   91  2  1   47   84   110 0.941   5.58
 5.15 Intr + 167103 167273  171  2  0   86   88   189 0.993  17.92
 5.16 Intr + 167368 167538  171  0  0  103   25   172 0.998  11.62
 5.17 Intr + 170465 170647  183  1  0   73  107   181 0.896  17.56
 5.18 Intr + 173446 173604  159  0  0   73   99   105 0.932   9.36
 5.19 Intr + 174072 174308  237  2  0   69   77   156 0.930   9.49
 5.20 Intr + 174592 174732  141  0  0   36   94    97 0.810   4.73
 5.21 Intr + 176434 176544  111  0  0   42  101    66 0.871   2.96
 5.22 Intr + 176719 176820  102  0  0  127   39    66 0.932   5.05
 5.23 Intr + 180812 180896   85  1  1   47  101   104 0.954   6.07
 5.24 Intr + 181007 181137  131  0  2   49  117    77 0.549   6.19
 5.25 Intr + 188620 188704   85  0  1   28   35   113 0.182  -1.53
 5.26 Intr + 188762 188963  202  0  1   59    7   265 0.534  12.92
 5.27 Intr + 190990 191045   56  1  2  136  108    36 0.770   8.10
 5.28 Intr + 207391 207554  164  2  2   59   92   105 0.949   6.77
 5.29 Term + 208902 208994   93  2  0  111   38    81 0.981   2.25
 5.30 PlyA + 209533 209538    6                               1.05

 6.03 PlyA - 209682 209677    6                               1.05
 6.02 Term - 217597 217063  535  0  1   61   47   495 0.553  35.43
 6.01 Init - 220198 220080  119  1  2   68   74    68 0.785   3.12

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 128642 128812  171  1  0   73   50   118 0.952   3.34
S.002 Init + 165112 165190   79  0  1   53   86    39 0.843   1.47
S.003 Intr + 166074 166383  310  1  1   66   28   175 0.827   3.75


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593f:69000806_69229614|GENSCAN_predicted_peptide_1|139_aa
MARDPGVSQLTQDHHFSGCHLTSPNHSSTLPMSTNAMSTTSWVSHVVIPGARIENKFFLT
TCKSIVRLSNIQLTFKHIFGNPLDTRGIIPVRMTIEQPIAGAGFRTAFADRAVFCSLRSE
GDLSAGYKAAKPAGPREAL

>gi568815593f:69000806_69229614|GENSCAN_predicted_CDS_1|420_bp
atggccagggatcctggagtttctcagctcacacaggaccaccatttctcagggtgtcat
ttgaccagccccaaccactccagtactctgcccatgtccaccaatgccatgtccaccacc
tcatgggtgtcacatgtggttattcctggagctagaattgagaacaaattcttccttaca
acatgcaaatctattgttcgactttcaaacatccaactaactttcaaacacatttttggg
aacccattagatacgaggggcatcatccctgtgaggatgacaatcgagcagcccattgca
ggggctggctttcgcactgcctttgccgatagagctgtcttctgctctctgagatcagaa
ggagatctaagtgctggatataaagctgccaaaccagcaggcccaagagaggcactctaa

>gi568815593f:69000806_69229614|GENSCAN_predicted_peptide_2|249_aa
MQYTNARGCKSHGLAEVMLVVRVCSVPSGSSKNVDWLTITESAGLRKQEVVSLEEGSFSP
PPENEFQATPAYLCSSLFDSCVKCESPAKREDGEFSIEGGNCEPLAANTHSSQEMGALAS
SGDLGRATAAPPADGSETPLKKKKRKKRKKRKRKKRKRKKRKKRKKKKKEEEEEEEEEEE
EEEEEEEEEEEKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEERRRRRRRRRR
RRRRRRRRR

>gi568815593f:69000806_69229614|GENSCAN_predicted_CDS_2|750_bp
atgcagtacacaaatgcaagaggctgtaaaagccacggactagcagaagttatgttagtt
gtgagagtgtgttctgtacccagtggtagctcaaaaaatgttgactggttgacaatcact
gagtcagctgggttgaggaaacaagaagtggtgtccttggaggaaggcagcttttctcca
cctccagaaaatgaattccaagcaacacctgcctatttgtgttcctctctttttgatagt
tgtgtaaagtgtgagtcacctgcaaaacgggaggatggagaattctctatagaagggggc
aactgtgaaccattagctgctaacactcatagcagccaagagatgggtgcactggcttct
tcaggggatctaggccgagctacagcagcaccccctgcagatggcagtgagactccatta
aaaaaaaagaagaggaagaagaggaagaagaggaagaggaagaagaggaagaggaagaag
aggaagaagaggaagaagaagaagaaagaagaagaggaagaagaggaagaagaggaagag
gaagaagaggaagaagaggaagaagaggaagaaaaagaagaagaagaagaggaagaagaa
gaagaagaggaagaagaagaagaggaagaggaagaggaagaggaagaggaggaagaggaa
gaggaagaagaagaagaagaagaagaagaaagaagaagaagaagaagaagaagaagaaga
agaagaagaagaagaagaagaagaagatga

>gi568815593f:69000806_69229614|GENSCAN_predicted_peptide_3|139_aa
MTLNEHAAFKHLFNKAHLAPPLIHLTLSGHSTCFREQRVGGKVTDQQDPKAEEFFLVQNK
MKSLPCLPLSTQTRQPSDFSISSPPFPPFYSTKPPLSSWPVLTSTSLLSCCFTKEAPSPH
QTSTQAAPRAAEEGSSSGG

>gi568815593f:69000806_69229614|GENSCAN_predicted_CDS_3|420_bp
atgactcttaacgagcatgctgccttcaagcatctgtttaacaaagcacatcttgcaccg
cccttaatccatttaaccctgagtggacacagcacatgtttcagagagcagagggttggg
ggtaaggtcacagatcaacaggatcccaaggcagaagaatttttcttagtacagaacaaa
atgaaaagtctcccatgtctacctctttctacacagacacggcaaccatccgatttctca
atctcttccccacctttcccccctttctattccacaaaaccgccattgtcatcatggccc
gttctcacaagcaccagtctcctcagctgctgcttcacaaaagaggcaccaagtccacac
caaacgagcacacaagcagccccaagagcagcagaagaaggaagcagcagtggtggatga

>gi568815593f:69000806_69229614|GENSCAN_predicted_peptide_4|227_aa
MFSKEKDKGSPLTMEESATGHARKAKDSRGMDGAGNFQQPGANRTCEGGSGSPEPSSREA
TFRERAAAQEKALPPTGVLLHSGTLPICGHPPTSSLSPPIPPAGDRHRGTVPSPRAPPQG
CHVAEEAGELTLGCSQAGLSSVAPPHPSYTHRPGCQPAGVSARGAFQHPPVLEELHLSPN
IFTRLLGAAFSALACMVHHLHLSEKLAWVPVEAFVGLQIQVNQSANP

>gi568815593f:69000806_69229614|GENSCAN_predicted_CDS_4|684_bp
atgttttccaaggaaaaggacaagggaagtccactcaccatggaagaaagtgccacaggg
catgctagaaaggccaaggacagcagagggatggatggagccggcaacttccagcagcca
ggagcaaacaggacttgtgaaggaggcagtggatctccagagcccagcagcagggaggct
actttccgggagagggcagcagcacaggagaaggccctgccgcctacaggggtcctactc
cactccgggaccctgcccatctgtggccatcctcccaccagcagcctgtcacctcccatc
cctcccgctggtgacaggcaccggggtaccgtgcccagcccccgggcacctccacagggc
tgccatgtggcagaggaagccggtgaactgacgcttggctgcagccaggcaggcctaagc
tctgttgccccgccgcatcccagctacacccacaggcctggatgccaaccagctggcgtc
agtgcccgcggtgccttccagcacccgcctgtcctggaggagctgcacctgtcccctaat
atcttcacccgcctcttaggggcagccttctcggccctggcgtgcatggtgcaccacctc
cacctctctgaaaagctggcctgggtgcccgtggaggccttcgtggggctgcagatccaa
gtgaaccaatccgccaacccgtga

>gi568815593f:69000806_69229614|GENSCAN_predicted_peptide_5|1444_aa
MEEKYGGDVLAGPGGGGGLGPVDVPSARLPPGSPGSSGACCRRKALKPKSFCLNFWVTRQ
TVSLRTARQFTTLLLFEHSDIVVISLLSVLFTSSGGGPAKGGVLLLVLALCCKVGFHTAS
RKLSVDVGGAKRLQALSHLVSVLLLCPWVIVLSVTTESKVESWFSLIMPFATVIFFVMIL
DFYVDSICSVKMEVSKCARYGSFPIFISALLFGNFWTHPITDQLRAMNKAAHQESTEHVL
SGGVVLFTFVELFYGVLTNSLGLISDGFHMLFDCSALVMGLFAALMSRWKATRIFSYGYG
RIEILSGFINGLFLIVIAFFVFMESVARLIDPPELDTHMLTPVSVGGLIVNLIGICAFSH
AHSHAHGASQGSCHSSDHSHSHHMHGHSDHGHGHSHGSAGGGMNANMRGVFLHVLADTLG
SIGVIVSTVLIEQFGWFIADPLCSLFIAILIFLSVVPLIKDACQVLLLRLPPEYEKELHI
ALEKIQKIEGLISYRDPHFWRHSASIVAGTIHIQVTSDVLEQRIVQQVTGILKDAGVNNL
TIQVEKEAYFQHMSGLSTGFHDVLAMTKQMESMKYCKDGTYIITFSVGLIHSPETILLLH
LEGYKSSCQPFGDWVGEGDWRSYHLVAAAAARERRRRGRPRESLARPSGLASLWPRPSRT
PSRDRPGNAFSATGSRQWEGSECHEQANKEGAVRGLNLRLGWLFSACCGGTAVGFCWVSL
AGRASGVLLLPAELLPGEEEAMALRVTRNSKINAENKAKINMAGAKRVPTAPAATSKPGL
RPRTALGDIGNKVSEQLQAKMPMKKEAKPSATGKVIDKKLPKPLEKVPMLVPVPVSEPVP
EPEPEPEPEPVKEEKLSPEPILVDTASPSPMETSGCAPAEEDLCQAFSDVILAVNDVDAE
DGADPNLCSEYVKDIYAYLRQLEEEQAVRPKYLLGREVTGNMRAILIDWLVQVQMKFRLL
QETMYMTVSIIDRFMQNNCVPKKMLQLVGVTAMFIASKYEEMYPPEIGDFAFVTDNTYTK
HQIRQMEMKILRALNFGLGRPLPLHFLRRASKIGEVDVEQHTLAKYLMELTMLDYDMVHF
PPSQIAAGAFCLALKILDNGEWTPTLQHYLSYTEESLLPVMQHLAKNVVMVNQGLTKHMT
VKNKYATSKHAKISTLPQLNSALVQDLAKAVAKRFPIVSEICSFRWVLGLVDFKNEATDP
RGVKPQTFDLCSECYSVTAHKDSTVLFSRWVHGLAGFRSEAADLPPSAVIFTSRARMKEE
PVVTTATEKQGGKVAGKATFSERVCLLSGSLSPQPAMEEQPQMQDADEPADSGGEGRAGG
PPQVAGAQAACSEDRMTLLLRLRAQTKQQLLEYKSMVDAKLKQASESKLLEIQTEKNKQK
IDLDSMENSERIKIIRQNLQMEIKITTVIQHVFQNLILGSKVNWAEDPALKEIVLQLEKN
VDMM

>gi568815593f:69000806_69229614|GENSCAN_predicted_CDS_5|4335_bp
atggaggagaaatacggcggggacgtgctggccggccccggcggcggcggcggccttggg
ccggtggacgtacccagcgctcggctgcctccgggctccccgggctcttcgggtgcctgc
tgcagaaggaaggcgctaaagccaaaaagcttctgcttgaatttctgggttacaaggcag
acagtcagtcttagaactgcccgccagttcacgactttgctgctatttgagcacagtgat
attgttgtcatttcactactcagtgttttgttcaccagttctggaggaggaccagcaaag
ggtggagtattattgctagtactggctttgtgttgtaaagttggttttcatacagcttcc
agaaagctctctgtcgacgttggtggagctaaacgtcttcaagctttatctcatcttgtt
tctgtgcttctcttgtgcccatgggtcattgttctttctgtgacaactgagagtaaagtg
gagtcttggttttctctcattatgccttttgcaacggttatcttttttgtcatgatcctg
gatttctacgtggattccatttgttcagtcaaaatggaagtttccaaatgtgctcgttat
ggatcctttcccatttttattagtgctctcctttttggaaatttttggacacatccaata
acagaccagcttcgggctatgaacaaagcagcacaccaggagagcactgaacacgtcctg
tctggaggagtggtactttttacctttgtggaattattctatggcgtgctgaccaatagt
ctgggcctgatctcggatggattccacatgctttttgactgctctgctttagtcatggga
ctttttgctgccctgatgagtaggtggaaagccactcggattttctcctatgggtacggc
cgaatagaaattctgtctggatttattaatggactttttctaatagtaatagcgtttttt
gtgtttatggagtcagtggctagattgattgatcctccagaattagacactcacatgtta
acaccagtctcagttggagggctgatagtaaaccttattggtatctgtgcctttagccat
gcccatagccatgcccatggagcttctcaaggaagctgtcactcatctgatcacagccat
tcacaccatatgcatggacacagtgaccatgggcatggtcacagccacggatctgcgggt
ggaggcatgaatgctaacatgaggggtgtatttctacatgttttggcagatacacttggc
agcattggtgtgatcgtatccacagttcttatagagcagtttggatggttcatcgctgac
ccactctgttctctttttattgctatattaatatttctcagtgttgttccactgattaaa
gatgcctgccaggttctactcctgagattgccaccagaatatgaaaaagaactacatatt
gctttagaaaagatacagaaaattgaaggattaatatcataccgagaccctcatttttgg
cgtcattctgctagtattgtggcaggaacaattcatatacaggtgacatctgatgtgcta
gaacaaagaatagtacagcaggttacaggaatacttaaagatgctggagtaaacaattta
acaattcaagtggaaaaggaggcatactttcaacatatgtctggcctaagtactggattt
catgatgttctggctatgacaaaacaaatggaatccatgaaatactgcaaagatggtact
tacatcataactttttctgttgggctgatccattccccagaaaccattctcttacttcac
ttagaagggtataagtccagctgccagccttttggggactgggtaggagaaggcgactgg
aggtcttaccatttggtggccgctgcagctgcccgagagcgcaggcgcagaggcagacca
cgtgagagcctggccaggccttccggcctagcctcactgtggccccgcccctctcgaacg
ccttcgcgcgatcgccctggaaacgcattctctgcgaccggcagccgccaatgggaaggg
agtgagtgccacgaacaggccaataaggagggagcagtgcggggtttaaatctgaggcta
ggctggctcttctcggcgtgctgcggcggaacggctgttggtttctgctgggtgtccttg
gctggtcgggcctccggtgttctgcttctccccgctgagctgctgcctggtgaagaggaa
gccatggcgctccgagtcaccaggaactcgaaaattaatgctgaaaataaggcgaagatc
aacatggcaggcgcaaagcgcgttcctacggcccctgctgcaacctccaagcccggactg
aggccaagaacagctcttggggacattggtaacaaagtcagtgaacaactgcaggccaaa
atgcctatgaagaaggaagcaaaaccttcagctactggaaaagtcattgataaaaaacta
ccaaaacctcttgaaaaggtacctatgctggtgccagtgccagtgtctgagccagtgcca
gagccagaacctgagccagaacctgagcctgttaaagaagaaaaactttcgcctgagcct
attttggttgatactgcctctccaagcccaatggaaacatctggatgtgcccctgcagaa
gaagacctgtgtcaggctttctctgatgtaattcttgcagtaaatgatgtggatgcagaa
gatggagctgatccaaacctttgtagtgaatatgtgaaagatatttatgcttatctgaga
caacttgaggaagagcaagcagtcagaccaaaatacctactgggtcgggaagtcactgga
aacatgagagccatcctaattgactggctagtacaggttcaaatgaaattcaggttgttg
caggagaccatgtacatgactgtctccattattgatcggttcatgcagaataattgtgtg
cccaagaagatgctgcagctggttggtgtcactgccatgtttattgcaagcaaatatgaa
gaaatgtaccctccagaaattggtgactttgcttttgtgactgacaacacttatactaag
caccaaatcagacagatggaaatgaagattctaagagctttaaactttggtctgggtcgg
cctctacctttgcacttccttcggagagcatctaagattggagaggttgatgtcgagcaa
catactttggccaaatacctgatggaactaactatgttggactatgacatggtgcacttt
cctccttctcaaattgcagcaggagctttttgcttagcactgaaaattctggataatggt
gaatggacaccaactctacaacattacctgtcatatactgaagaatctcttcttccagtt
atgcagcacctggctaagaatgtagtcatggtaaatcaaggacttacaaagcacatgact
gtcaagaacaagtatgccacatcgaagcatgctaagatcagcactctaccacagctgaat
tctgcactagttcaagatttagccaaggctgtggcaaagagatttcctattgtgtccgaa
atttgttccttccggtgggttcttggtctcgttgacttcaagaatgaagccacggaccct
cgcggagtgaagccgcagaccttcgacctttgcagtgagtgttacagtgttacagctcat
aaagacagcactgttctcttctcccggtgggttcatggtctcgctggcttcaggagtgaa
gctgcagaccttccgccgtctgcagttattttcaccagtagagcccggatgaaagaggag
cccgtagtaaccacggcaaccgaaaaacaaggcggaaaggtggcgggaaaagcgaccttt
tctgagcgcgtttgcctgttgagtggtagcctttcccctcaaccagcaatggaggagcag
ccccagatgcaagacgccgacgagcccgcggactccggaggggaaggccgggcaggcggg
ccaccgcaggtcgccggcgcccaggcggcgtgcagcgaggaccgcatgaccctgctcctc
aggctgagagcacagacaaaacaacaactcttagaatataaatcaatggttgatgcaaaa
ttaaaacaagcttcagaaagtaagcttttagaaatacagactgaaaagaacaaacagaag
attgatttggacagtatggaaaactcagagaggataaagatcatacgacaaaacctacag
atggagataaaaattactactgttattcaacatgtgttccagaaccttattttggggagt
aaagtcaattgggcagaggatcctgcccttaaggaaattgttctgcagcttgagaagaat
gttgacatgatgtaa

>gi568815593f:69000806_69229614|GENSCAN_predicted_peptide_6|217_aa
MTLNEHAAFKHLFNKAHLAPPLIHLTLSGHSTFQRARGWGQTLGEVGENPLRRGRSTRGQ
LPDHSRDLEGTVGQIQGSLPSTPRYRLPSDWLIGGTTANPRRRLARLPPGSPHPHTPKTN
KVLAEERGIPAVGTGPTCQDAARLPQGSNPRRRTHLTARSNRLKVPSSHTPAGAVTGPPQ
RRGHRSASATAFTPRRRRHSQHRPYRPRCGNATNCFT

>gi568815593f:69000806_69229614|GENSCAN_predicted_CDS_6|654_bp
atgactcttaacgagcatgctgccttcaagcatctgtttaacaaagcacatcttgcaccg
cccttaatccatttaaccctgagtggacacagcacgtttcagagagcacggggttggggc
cagacgcttggagaggttggggagaacccgctccggcgaggacgcagtacgcggggccag
ttgcccgaccattcccgagaccttgaagggacagtgggtcagatccagggttcgcttcct
tccacgccccgctaccgccttccttccgattggctgatcgggggcaccacagccaatcct
agacggcgattggccaggctaccgccagggtcgcctcacccgcacacgcctaagactaac
aaggtcctggcggaggagcgggggatcccggcagtaggtacaggacctacctgccaagat
gctgcacggttgccgcaaggctcgaaccctcggcgccggacccacctcactgcccggtcc
aacaggctcaaagtcccatcctcacacacacccgcgggcgccgtcactggccctccgcag
aggcgcggtcaccgctctgcctctgccaccgcctttactccccgacgccgtcgccatagt
cagcaccgtccctaccgcccaagatgcggaaacgcgacaaattgctttacctga