GENSCAN 1.0	Date run:  6-Nov-116	Time: 21:05:36

Sequence gi568815597r:77465643_77733354 : 267712 bp : 39.64% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 PlyA -   1498   1493    6                               1.05
 1.05 Term -   6930   6820  111  0  0  157   48    29 0.841   3.38
 1.04 Intr -   8926   8761  166  0  1   78   50   110 0.749   5.24
 1.03 Intr -  23063  22938  126  1  0   -4  113   126 0.038   4.77
 1.02 Intr -  31280  31149  132  1  0   77   70    74 0.298   3.34
 1.01 Init -  31830  31727  104  0  2   60   80   122 0.550   8.36
 1.00 Prom -  38868  38829   40                              -1.85

 2.00 Prom +  47050  47089   40                              -3.65
 2.01 Init +  48166  48297  132  0  0   62   86    57 0.660   3.09
 2.02 Intr +  52321  52414   94  0  1   77   84    38 0.686   0.92
 2.03 Intr +  52922  53085  164  0  2   53   63   216 0.832  14.37
 2.04 Intr +  56185  56301  117  0  0   88   96   140 0.757  14.54
 2.05 Intr +  61787  61912  126  1  0   68   92    52 0.615   3.56
 2.06 Intr +  63148  63223   76  0  1   90  107    20 0.599   2.27
 2.07 Intr +  66484  66615  132  2  0   39   40   117 0.393   1.70
 2.08 Term +  70205  70422  218  0  2   87   44   204 0.947  12.22
 2.09 PlyA +  71399  71404    6                               1.05

 3.06 PlyA -  73306  73301    6                               1.05
 3.05 Term -  73563  73490   74  1  2   46   44    92 0.480  -2.31
 3.04 Intr -  74026  73892  135  2  0   75   75    65 0.387   3.52
 3.03 Intr -  76257  76144  114  1  0   78   80    50 0.736   2.70
 3.02 Intr -  79160  79004  157  2  1   51   88    60 0.631   0.96
 3.01 Init -  79336  79250   87  1  0   80   55    68 0.681   3.39
 3.00 Prom -  83611  83572   40                              -4.95

 4.11 PlyA -  83651  83646    6                               1.05
 4.10 Term - 100142  99998  145  1  1  115   44    59 0.843   0.60
 4.09 Intr - 100539 100439  101  0  2   56  119    68 0.990   4.69
 4.08 Intr - 102824 102690  135  2  0   85  115    94 0.995  11.64
 4.07 Intr - 110578 110426  153  1  0   56   89   191 0.934  15.35
 4.06 Intr - 113986 113885  102  1  0   23   91   109 0.942   4.15
 4.05 Intr - 115427 115356   72  2  0   74   90    93 0.991   6.78
 4.04 Intr - 116249 116134  116  0  2   71  115    79 0.796   8.15
 4.03 Intr - 116484 116337  148  0  1   97  116    23 0.541   4.89
 4.02 Intr - 119013 118875  139  2  1   69   69   176 0.669  13.35
 4.01 Init - 167712 166208 1505  0  2   35   36  1381 0.006 119.21
 4.00 Prom - 176109 176070   40                              -5.95

 5.19 PlyA - 177888 177883    6                               1.05
 5.18 Term - 179850 179784   67  2  1   96   38    85 0.032   0.73
 5.17 Intr - 218047 217620  428  1  2   63  105   359 0.080  26.76
 5.16 Intr - 218356 218219  138  1  0   19   51   201 0.072   9.24
 5.15 Intr - 231832 231696  137  2  2   38   -1   104 0.015  -4.13
 5.14 Intr - 232289 232221   69  0  0   71  115    39 0.858   3.14
 5.13 Intr - 235829 235727  103  2  1   96  107    45 0.930   6.03
 5.12 Intr - 246213 246105  109  2  1   73   65    30 0.098  -1.43
 5.11 Intr - 250226 250100  127  0  1  103   63    68 0.726   4.62
 5.10 Intr - 252405 252225  181  0  1   85   86    50 0.575   3.02
 5.09 Intr - 252999 252954   46  2  1  134   64     9 0.548   0.59
 5.08 Intr - 255563 255530   34  0  1   99  106    -8 0.559  -1.54
 5.07 Intr - 256259 256189   71  1  2   77  116    61 0.901   5.71
 5.06 Intr - 256554 256382  173  0  2    2   87   109 0.728   0.02
 5.05 Intr - 257801 257689  113  0  2   67   96    51 0.965   2.98
 5.04 Intr - 260120 259980  141  0  0   52   93   130 0.979   9.30
 5.03 Intr - 263070 262653  418  0  1   15   61   441 0.874  26.77
 5.02 Intr - 264296 264218   79  1  1   64   92    54 0.862   2.03
 5.01 Intr - 265089 264976  114  2  0   58   91    72 0.689   3.14

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl - 167712 166198 1515  0  0   35   36  1387 0.993 123.33
S.002 Init - 218398 218219  180  1  0   65   51   177 0.847  10.93
S.003 Term - 231832 231675  158  2  2   38   28   141 0.866   0.21


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:77465643_77733354|GENSCAN_predicted_peptide_1|212_aa
MKPRTLVVTVTVHEDGVSGVCSFTCSDVSGVSSFRVPIGPFYSVPISPFYRVLIGPFYRV
LIGPFYRMPIGAFLQSADCLHVSPMLDASYPQTPSSSVLRLGLALLAPELADSLLWDLVI
TLKHFLIITVIEATVFHQPLRSLQSDLDPTSPAFIIPQHECLCSIPKALEGKPEWKVEPT
SLFGCRKCQILAFPSSLALWVWVCDQIRAKRM

>gi568815597r:77465643_77733354|GENSCAN_predicted_CDS_1|639_bp
atgaagccacggaccctcgtggtgactgttacagttcatgaagatggtgtgtccggagtt
tgttccttcacatgttcggatgtgtccggagtttcttccttccgagtgccgattggtcca
ttttacagcgtgccaattagtccattttacagagtgctgattggtccattttacagagtg
ctgattggtccattttacagaatgccgattggtgcatttttacagagtgctgattgcctg
catgtttcccccatgctggatgcttcctaccctcaaactccaagttcttcagttttgcga
ctcggactggctctccttgctcctgagcttgcagacagcctgttgtgggaccttgtgatc
accctgaagcacttcttgatcatcactgtcatagaagcaacagttttccatcaaccactc
cgaagcctacagtctgacctggaccctacttctcctgctttcattattcctcaacatgaa
tgtctgtgttcaatccccaaggctctagagggtaagcctgagtggaaagtagagcccacc
tctctttttggatgcagaaaatgccagatccttgcatttccatcctcccttgcattatgg
gtatgggtctgtgaccaaatcagggccaagaggatgtga

>gi568815597r:77465643_77733354|GENSCAN_predicted_peptide_2|352_aa
MLNPGAISQERIAPVNTKQTGKRDPRGHAEVMQMVSVLLLKEHQEMTLKGSGVKRHPISN
LFPSVSESSLSSQPFCGPGSGKGTQCEKLVEKYGFTHLSTGELLREELASESERSKLIRD
IMERGDLVPSGIVLELLKEAMVASLGDTRGFLIDGYPREVKQGEEFGRRTGFRMWQRRSL
TRTKEQESHQHGDWTVTLNAKIHDSISNNTQLRTPGYSDSGVNRPVFGAWLCNSLAAKEA
GSGLGQPRKGLPQCSGGLKGSSSAARVGAKAEEALTSSGGYWRPTVGDLYGLLGRHHDQP
PSPKEPEQPACGRHHQDHRQAPRSLLPSVHPRDRLLRDKNTATQGESLHFLL

>gi568815597r:77465643_77733354|GENSCAN_predicted_CDS_2|1059_bp
atgctgaatccaggagctatctcacaggagaggattgctcctgtcaatacaaagcaaact
ggaaaacgtgacccacgtgggcatgccgaggtgatgcagatggtttcagttctacttctc
aaagaacaccaggaaatgacactaaaaggttctggagtaaagaggcatccaattagcaac
ttattcccaagtgtttctgaaagttctttgtcctcacaacccttctgtggtcctggctct
ggcaaaggcacacagtgtgaaaagctggtggaaaaatatggatttacacatctctcaact
ggcgagctcctgcgtgaggaactggcatcagaatctgaaagaagcaaattgatcagagac
attatggaacgtggagacctggtgccctcaggcatcgttttggagctcctgaaggaggcc
atggtggccagcctcggggacaccaggggcttcctgattgacggctatcctcgggaggtg
aagcaaggggaagagttcggacgcaggaccggttttagaatgtggcagagaagaagccta
actagaactaaggaacaagaaagtcatcaacatggtgactggacagttacactcaatgct
aaaattcatgattccatttcaaacaacacacagctgagaacccctggttatagtgactct
ggtgtgaacaggcctgtatttggagcctggctttgtaattcattggctgctaaggaagcc
ggctccggccttgggcagcccagaaaggggctcccacagtgcagcggcgggctgaagggc
tcctcaagcgcggccagagtgggcgccaaggcggaggaggcgctgacatcgagcgggggc
tattggagacccacagttggtgatctgtatggactgctcggcagacaccatgaccaaccg
ccttctccaaaggagccggagcagcctgcctgtggacgacaccaccaagaccatcgccaa
gcgcctagaagcctactaccgagcgtccatccccgtgatcgcctactacgagacaaaaac
acagctacacaaggcgagtcacttcactttctcctctga

>gi568815597r:77465643_77733354|GENSCAN_predicted_peptide_3|188_aa
MDYSHVCGDAGVKKSTVLPVLEKYSTYNHSAFFLLVKKELTVKQPQAGPSGMFQKKALLS
KQTTAPCMLLPLKTFQWARYGAKRAKETLSKARPTTSFLSGIWSWESECRGNVQMRKLSA
ANNPVPSPASPAVPALVTLATGKPHGYLQTNLSFLGPAHTVSMLGRTNVESSVLNETNNL
DVHTVTDG

>gi568815597r:77465643_77733354|GENSCAN_predicted_CDS_3|567_bp
atggattactcacatgtttgtggtgatgctggtgtaaagaaatccactgtgctgccggtg
ttggaaaagtatagcacgtacaatcacagtgcattttttctacttgttaaaaaagagcta
actgtcaaacagcctcaggcaggtccttcaggaatgttccagaaaaaggccttgttatca
aagcagacgacagctccatgcatgttactgcccctgaagaccttccagtgggcaagatac
ggagctaagagagccaaggagaccctgagcaaagcaaggccaaccacatcatttctctca
ggaatctggagctgggaatcagagtgccgtggtaatgtgcaaatgcgaaagctgtcagcg
gcaaacaatcctgtcccctcccctgcttctcctgcagtccccgctcttgtcaccctagct
actggcaaaccccacgggtacctgcagacaaatctcagcttcctgggcccagcacacact
gtttctatgctaggccgaaccaacgtggagtcatccgtgctaaatgaaacaaacaacttg
gatgtacacactgtaacagatggctga

>gi568815597r:77465643_77733354|GENSCAN_predicted_peptide_4|871_aa
MAASRSTRVTRSTVGLNGLDESFCGRTLRNRSIAHPEEISSNSQVRSRSPKKRPEPVPIQ
KGNNNGRTTDLKQQSTRESWVSPRKRGLSSSEKDNIERQAIENCERRQTEPVSPVLKRIK
RCLRSEAPNSSEEDSPIKSDKESVEQRSTVVDNDADFQGTKRACRCLILDDCEKREIKKV
NVSEEGPLNSAVVEEITGYLAVNGVDDSDSAVINCDDCQPDGNTKQNSIGSYVLQEKSVA
ENGDTDTQTSMFLDSRKEDSYIDHKVPCTDSQVQVKLEDHKIVTACLPVEHVNQLTTEPA
TGPFSETQSSLRDSEEEVDVVGDSSASKEQCKENTNNELDTSLESMPASGEPEPSPVLDC
VSAQMMSLSEPQEHRYTLRTSPRRAAPTRGSPTKNSSPYRENGQFEENNLSPNETNATVS
DNVSQSPTNPGEISQNEKGICCDSQNNGSEGVSKPPSEARLNIGHLPSAKESASQHITEE
EDDDPDVYYFESDHVALKHNKDYQRLLQTIAVLEAQRSQAVQDLESLGRHQREALKNPIG
FVEKLQKKADIGLPYPQRVVQLPEIVWDQYTHSLGNFEREFKNRKRHTRRVKLVFDKVGL
PARPKSPLDPKKDGESLSYSMLPLSDGPEGSSSRPQMIRGRLCDDTKPETFNQLWTVEEQ
KKLEQLLIKYPPEEVESRRWQKIADELGNRTAKQSSTSRRQHPLNKHLFKPSTFMTSHEP
PVYMDEDDDRSCFHSHMNTAVEDASDDESIPIMYRNLPEYKELLQFKKLKKQKLQQMQAE
SGFVQHVGFKCDNCGIEPIQGVRWHCQDCPPEMSLDFCDSCSDCLHETDIHKEDHQLEPI
YRSETFLDRDYCVSQGTSYNYLDPNYFPANR

>gi568815597r:77465643_77733354|GENSCAN_predicted_CDS_4|2616_bp
atggctgcttcccgatctactcgtgttacaagatcaacagtggggttaaacggcttggat
gaatctttttgtggtagaactttaaggaatcgtagcattgcgcatcctgaagaaatctct
tctaattctcaagtacgatcaagatcaccaaagaagagaccagagcctgtgccaattcag
aaaggaaataataatgggagaaccactgatttaaaacagcagagtacccgagaatcatgg
gtaagccctaggaaaagaggactttcttcttcagaaaaggataacatagaaaggcaggct
atagaaaattgtgagagaaggcaaacagaacctgtttcaccagttttaaaaagaattaag
cgttgtcttagatctgaagcaccaaacagttcagaagaagattctcctataaaatcagac
aaggagtcagtagaacagaggagtacagtagtggacaatgatgcagattttcaagggact
aaacgagcttgtcgatgtcttatactggatgattgtgagaaaagggaaattaaaaaggtg
aatgtcagtgaggaagggccacttaattctgcagtagttgaagaaatcacaggctatttg
gctgtcaatggtgttgatgacagtgattcagctgttataaactgtgatgactgtcagcct
gatgggaacactaaacaaaatagcattggttcctatgtgttacaggaaaaatcagtagct
gaaaatggggatacggatacccaaacttcaatgttccttgatagtaggaaggaggacagt
tatatagaccataaggtgccttgcacagattcacaagtgcaggtcaagttggaggaccac
aaaatagtaactgcctgcttgcctgtggaacatgttaatcagctgactactgagccagct
acagggcccttttctgaaactcagtcatctttaagggattctgaggaggaagtagatgtg
gtgggagatagcagtgcctcaaaagagcagtgtaaagaaaacaccaataacgaactggac
acaagtcttgagagtatgccagcctccggagaacctgaaccatctcctgttctagactgt
gtttcagctcaaatgatgtctttatcagaacctcaagaacatcgttatactctgagaacc
tcaccacgaagggcagcccctaccagaggtagtcccactaaaaacagttctccttacaga
gaaaatggacaatttgaggagaataatcttagtcctaatgaaacaaatgcaactgttagt
gataatgtaagtcaatctcctacaaatcctggtgaaatttctcaaaatgaaaaagggata
tgttgtgactctcaaaataatggaagtgaaggagtaagtaaaccaccctcagaggcaaga
ctcaatattggacatttgccatctgccaaagagagtgccagtcagcacattacagaagag
gaagatgatgatcctgatgtttattactttgaatcagatcatgtggcactgaaacacaac
aaagattatcagagactattacagacgattgctgtactcgaggctcagcgttctcaagca
gtccaagaccttgaaagtttaggcaggcaccagagagaagcactgaaaaatcccattgga
tttgtggaaaaactccagaagaaggctgatattgggcttccatatccacagagagttgtt
caattgcctgagatcgtatgggaccaatatacccatagccttgggaattttgaaagagaa
tttaaaaatcgtaaaagacatactagaagagttaagctagtttttgataaagtaggttta
cctgctagaccaaaaagtcctttagatcctaagaaggatggagagtccctttcatattct
atgttgcctttgagtgatggtccagaaggctcaagcagtcgtcctcagatgataagagga
cgcttgtgtgatgataccaaacctgaaacatttaaccagttgtggactgttgaagaacag
aaaaagctggaacagctactcatcaaataccctcctgaagaagtagaatctcgacgctgg
cagaagatagcagatgaattgggcaacaggacagcaaaacagtcttcaacaagcagacga
cagcaccctcttaataagcatctctttaagccttccactttcatgacttcacatgaaccg
ccagtgtatatggatgaagatgatgaccgatcttgttttcatagccacatgaacactgct
gttgaagatgcatcagatgacgaaagtattcctatcatgtataggaatttacctgaatat
aaagaactattacagtttaaaaagttaaagaagcagaaacttcagcaaatgcaagctgaa
agtggatttgtgcaacatgtgggctttaagtgtgataactgtggcatagaacccatccag
ggtgttcggtggcattgccaggattgtcctccagaaatgtctttggatttctgtgattct
tgttcagactgtctacatgaaacagatattcacaaggaagatcaccaattagaacctatt
tataggtcagagacattcttagacagagactactgtgtgtctcagggcaccagttacaat
taccttgacccaaactactttccagcaaacagatga

>gi568815597r:77465643_77733354|GENSCAN_predicted_peptide_5|849_aa
XPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWHKSRPGSVVPTTLFQGIKTVNPTFR
GYSQQDAQEFLRCLMDLLHEELKEQVMEVEEDPQTITTEETMEEDKSQSDVDFQSCESCS
NSDRAENENGSRCFSEDNNETTMLIQDDENNSEMSKDWQKEKMCNKINKVNSEGEFDKDR
DSISETVDLNNQETVKVQIHSRASEYITDVHSNDLSTPQILPSNEGVNPRLSASPPKSGN
LWPGLAPPHKKAQSASPKRKKQHKKYRSVISDIFDGTIISSVQCLTCDRVSVTLETFQDL
SLPIPGKEDLAKLHSSSHPTSIVKAGSCGEAYAPQGWIAFFMEYVKSWFWGPVVTLQDCL
AAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQNFPEILCIHLKRFRHELMFSTKISTHV
SFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHGTASSGHYIAYCRNNLNNLWYEFDDQS
VTEVSESTVQNAEAYVLFYRYGGGPAVNHLYICHTCQIEAEKIEKRRKTELEIFIRLNRA
FQKEDSPATFYCISMQWFREWESFVKGKDGDPPGPIDNTKIAVTKCGNVMLRQGADSGQI
SEETWNFLQSIYGGGPEVILRPPVVHVDPDILQAEEKIEPSEKGPEICIEHRGVKKNLEE
MFCQRNRQAQRPEVVRACVLWYKPEGQVGRLQGMDCNPPSEDQTSPRGRDWPGRASAAPD
PRALHGPRLPAGGVVSAPAAAATAAAAVAAAAAARQSQRGERRGPEGAAGAAGSGRSGRR
GPTWKRRGAAIELPAAVATRASAVAGAESGHGGGASPSGPLRPTPRERRPGHTLLPGDHH
IDAELNADT

>gi568815597r:77465643_77733354|GENSCAN_predicted_CDS_5|2550_bp
nncccacctttgacacagttttttcttgattgtggaggactagctcgaacagataagaaa
cctgccatttgtaaaagttatctcaaactaatgacagagctgtggcataaaagcaggcca
ggatctgttgtgcctactactctgtttcaaggaattaaaactgtaaatccaacatttcgg
gggtattctcagcaggatgctcaagaattccttcgatgtttaatggatttgcttcatgaa
gaattgaaagagcaagtcatggaagtagaagaagatccgcaaaccataaccactgaggag
acaatggaagaagacaagagccagtcggatgtagattttcagtcttgtgaatcttgtagc
aacagtgatagagcagaaaatgaaaatggctctagatgcttttctgaagataataatgaa
acaacaatgttaattcaggatgatgaaaacaattcagaaatgtcaaaggattggcaaaaa
gagaagatgtgcaataagattaataaagtaaattctgaaggcgaatttgataaagataga
gactctatatctgaaacagtcgacttaaacaaccaggaaactgtcaaagtgcaaatacac
agcagagcttcagaatatatcactgatgtccattcgaatgacctgtctacaccacagatc
cttccatcaaatgaaggtgttaatccacgtttatcggcaagccctcctaaatcaggcaat
ttgtggccaggattggcaccaccacacaaaaaagctcagtctgcatctccaaagagaaaa
aaacagcacaagaaatacagaagtgttatttcagacatatttgatggaacaatcattagt
tcagtgcagtgtctgacttgtgacagggtgtctgtaaccctcgagacctttcaagatctg
tccttgccaattcctggcaaggaagaccttgctaagctgcattcatcaagtcatccaact
tctatagtcaaagcaggatcatgtggcgaagcatatgctccacaagggtggatagctttt
ttcatggaatatgtgaagagctggttttggggtccagtagtaaccttgcaagattgtctt
gctgccttctttgccagagatgaactaaaaggtgacaatatgtacagttgtgaaaaatgc
aaaaagttgagaaatggagtgaagttttgtaaagtacaaaactttcctgagattttgtgc
atccaccttaaaagattcagacatgaactaatgttttccaccaaaatcagtacccatgtt
tcatttccgctagaaggcttggatcttcagccatttcttgctaaggatagtccagctcaa
attgtgacatatgatcttctgtcagtcatttgccatcatggaactgcaagtagtggacac
tatatagcctactgccgaaacaatctaaataatctctggtatgaatttgatgatcagagt
gtcactgaagtttcagaatctactgtacaaaatgcagaagcttacgttcttttctatagg
tatggtggaggaccagctgtcaaccatctgtacatttgtcatacttgccaaattgaggcg
gagaaaattgaaaaaagaagaaaaactgaattggaaatttttattcggcttaacagagcg
ttccaaaaagaggactctccagctactttttattgcatcagtatgcagtggtttagagaa
tgggaaagttttgtgaagggtaaagatggagatcctccaggtcctattgacaatactaag
attgcagtcactaaatgtggtaatgtgatgcttaggcaaggagcagattctggccagatt
tctgaagaaacatggaattttctgcagtctatttatggtggagggcctgaagttatcctg
cgacctccggttgttcatgttgatccagatatacttcaagcagaagaaaaaattgaaccc
tctgagaagggacctgaaatatgcatcgaacatcgaggagttaaaaaaaatctggaggaa
atgttctgccagagaaatcggcaagcacaaaggcccgaagtggttcgagcctgcgtgctg
tggtacaagccagagggccaggttggacggttgcaagggatggactgcaacccgccctcg
gaagaccaaacttcgcccaggggcagggactggccggggagggcctcggcggcgcccgac
ccgcgggcgctgcacgggccgcggttaccagcaggcggtgtagtgagcgcgcctgcagca
gcagcaacagcagcagcagcggtcgccgccgccgccgccgcccgccagtcccaacgagga
gaaaggaggggaccggaaggagccgctggtgctgcgggaagtggcaggagcgggaggcgg
ggacccacctggaagcgccgcggcgccgctatcgagcttcctgcagcggtggccacccga
gcaagtgccgtggcgggggcggagagcggccacggcggcggcgcctccccaagtggcccg
ttgcgtccgaccccgcgtgaaaggcgacctggtcataccctgctccctggagatcaccat
attgatgccgaacttaatgcagacacctga