GENSCAN 1.0	Date run:  6-Nov-116	Time: 21:12:33

Sequence gi568815595f:157336934_157542976 : 206043 bp : 38.61% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   3953   4115  163  1  1   69   71    54 0.313   0.43
 1.02 Term +   7226   8010  785  0  2   60   38   330 0.269  17.71
 1.03 PlyA +   8252   8257    6                               1.05

 2.07 PlyA -   9858   9853    6                               1.05
 2.06 Term -  20487  20378  110  1  2   73   48    33 0.207  -4.51
 2.05 Intr -  26828  26431  398  1  2   93  115   296 0.985  26.10
 2.04 Intr -  27579  27370  210  2  0   76   75   171 0.999  11.71
 2.03 Intr -  44443  44223  221  1  2   68   99   196 0.015  14.88
 2.02 Intr -  54194  53904  291  2  0   88   25   216 0.724  11.71
 2.01 Init -  54599  54591    9  2  0  107   55    26 0.851   0.34
 2.00 Prom -  56021  55982   40                              -4.35

 3.08 PlyA -  56610  56605    6                               1.05
 3.07 Term -  58757  58153  605  0  2  -54   43   457 0.104  20.69
 3.06 Intr -  68145  68063   83  2  2   89   83    75 0.126   5.46
 3.05 Intr -  69766  69587  180  0  0   90   42    67 0.100   0.36
 3.04 Intr -  75018  74873  146  0  2   53   30    81 0.206  -3.04
 3.03 Intr -  77157  76948  210  0  0  140  100   140 0.953  18.59
 3.02 Intr -  78780  78710   71  1  2    6   74   107 0.787  -0.92
 3.01 Init -  81117  81027   91  0  1   83   27   100 0.776   4.10
 3.00 Prom -  83042  83003   40                              -5.65

 4.00 Prom +  85489  85528   40                              -4.65
 4.01 Sngl +  88175  88594  420  1  0   86   34   237 0.430  14.15
 4.02 PlyA +  89747  89752    6                               1.05

 5.00 Prom +  94207  94246   40                              -3.95
 5.01 Init + 100001 100130  130  1  1   67  103   103 0.955   8.40
 5.02 Intr + 100580 100981  402  0  0   85  110   361 0.989  31.47
 5.03 Term + 105433 106046  614  2  2  103   36   377 0.951  27.65
 5.04 PlyA + 106202 106207    6                               1.05

 6.00 Prom + 106974 107013   40                              -6.25
 6.01 Init + 110980 111070   91  0  1   41   46   200 0.665  11.80
 6.02 Term + 113814 113908   95  1  2   88   38    47 0.423  -3.29
 6.03 PlyA + 114514 114519    6                               1.05

 7.05 PlyA - 115469 115464    6                               1.05
 7.04 Term - 118805 118711   95  0  2   60   32    70 0.077  -4.39
 7.03 Intr - 123422 123248  175  2  1   69   86   114 0.637   7.89
 7.02 Intr - 133596 133381  216  0  0   77   91   158 0.974  12.78
 7.01 Init - 158416 158279  138  1  0   84   89   111 0.640  11.00
 7.00 Prom - 164250 164211   40                              -5.15

 8.00 Prom + 173980 174019   40                              -3.65
 8.01 Init + 175932 175982   51  2  0   70  103    54 0.897   6.31
 8.02 Term + 186494 186598  105  1  0   43   46   115 0.650   0.23
 8.03 PlyA + 188664 188669    6                               1.05

 9.00 Prom + 190317 190356   40                              -3.45
 9.01 Init + 193645 193694   50  0  2   66   40    93 0.168   2.77
 9.02 Term + 202633 202810  178  1  1   86   54    72 0.037  -0.22
 9.03 PlyA + 203996 204001    6                               1.05

10.03 PlyA - 204904 204899    6                               1.05
10.02 Term - 205502 205266  237  2  0   56   49   222 0.986  10.28
10.01 Intr - 205949 205730  220  1  1   72   49    91 0.527   0.98

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  44395  44223  173  1  2  119   99   186 0.895  21.76
S.002 Term + 162342 162639  298  0  1  114   44   217 0.949  13.65


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595f:157336934_157542976|GENSCAN_predicted_peptide_1|315_aa
PLLLIPRQTGSGVDLQQTPTDLQLRVLTVRRKTNKQEGHPHQNPVCTSPSSKTKVLEVLA
RAIRQEKEIKGIQLGKEEVKLSLFADDMIVYLENPIISAQNLLKLISNFSKVSAYKINVQ
KSQAFLYTNNRQTESQIMSKLPFTIASKRIKYLGIQLTRDVKDLFKENYKPLLNEIKEDT
NKWNIPCSWIGRINIMKMAILPKVIYRSSAIPIKLPMTFFTELEKTTLNFIWNQKRARIA
KTVLSQNNKAGGITLPDFKQYYTATITKTSWYWYQNRDIDQRKRTEPSEIMPHIYNHLIF
HKPDKNQKWGKDSPI

>gi568815595f:157336934_157542976|GENSCAN_predicted_CDS_1|948_bp
cctctgctgctgatacctagacaaacagggtctggggtggacctccagcaaactccaaca
gacctgcagctgagagtcctgactgttagaaggaaaactaacaaacaggaaggacatcca
caccaaaaccccgtctgtacatcaccatcatcaaagaccaaagtgttggaagttctggcc
agggcaatcaggcaggagaaagaaataaagggtattcaattaggaaaagaggaagtgaaa
ttgtccctgtttgcagatgacatgattgtatatttagaaaaccccatcatctcagcccaa
aatctccttaagctgataagcaacttcagcaaagtctcagcatacaaaatcaatgtgcaa
aaatcacaagcattcttatacaccaataacagacaaacagagagccaaatcatgagtaaa
ctcccattcacaattgcttcaaagagaataaaatacctaggaatccaacttacaagggat
gtgaaggacctcttcaaggagaactacaaaccactgctcaacgaaataaaagaggataca
aacaaatggaacattccatgctcatggataggaagaatcaatatcatgaaaatggccata
ctgcccaaggtaatttatagatccagtgccatccccatcaagctaccaatgactttcttc
acagaattggaaaaaactactttaaatttcatatggaaccaaaaaagagcccgcattgcc
aagacagtcctaagccaaaataacaaagctggaggcatcacgctacctgacttcaaacaa
tactacacggctacaataaccaaaacatcatggtactggtaccaaaacagagatatcgac
caacggaaaagaacagaaccctcagaaataatgccacacatctacaaccatctgatcttt
cacaaacctgacaaaaaccagaaatggggaaaggattcccctatttaa

>gi568815595f:157336934_157542976|GENSCAN_predicted_peptide_2|412_aa
MPLVRQAWNGKGCVSDKVQDLAAASQVHQLLWQAAPGISRVASSMQGCGWTRHASSSFRF
GRWHLDKRNVVVPKNLEMPATMEPRGDVTACHSSGSGSPEERARSCLTYLVSQLANMEHS
FHHILLLEIKSITDTFSSILGPQSRDIFRMSNSFTAIAKLLTRQLENTKAGSGRRKISTE
IEFPEKLEETKLIVTENEDHEKLQVKIQAFEDKINAGSNTPGSIRRYSLGQVSKEERKNI
RFNRSKSLAFHTMLTKGVGSDDGEDENRGDIPASISLSEIDPLGQGNDKLPFKTDTERSQ
LGESSVSYPNIIHIDSENLSETVKENSQEETPETTASPIEYQDKLYLHLKKNLSKVKAYA
MEIGKKIPVPDQCTIEDEMNIHLTRKQCKIKLVEHMHTLRTFCMEIQEQLSD

>gi568815595f:157336934_157542976|GENSCAN_predicted_CDS_2|1239_bp
atgccgctggtgagacaggcgtggaacggcaaggggtgtgtgagtgacaaagtacaagat
ctggccgcagcaagccaggtgcaccagctgctgtggcaggcagctccaggcatcagcaga
gttgcaagctccatgcaaggctgtggctggaccaggcatgcctcaagcagcttccgcttt
gggcgctggcatctggacaagaggaatgtggtggtgcccaaaaacttggagatgccagca
accatggagccccgaggggatgttacagcgtgtcacagctctggctcagggagtcctgag
gagagagccaggagctgcctgacatacctggtgagccaactggccaacatggagcattcg
tttcaccatattctcctgctggagattaaaagcatcaccgacaccttctcctcaatcttg
ggccctcagagcagagacatcttccgcatgagcaacagcttcaccgccattgctaaactc
cttacccgacaactggaaaataccaaggctggaagtggcaggagaaaaatcagcactgaa
attgaattccctgagaaactggaagaaaccaagctcatagtaactgaaaatgaagaccat
gaaaaactccaagttaaaatccaggcttttgaagacaagataaatgcagggagcaatacc
cctggctctatcagaagatatagtctgggccaagtttctaaagaagaaagaaaaaacatt
agatttaacaggtcaaaaagtttggctttccacactatgctcacaaagggtgtgggttca
gatgacggcgaagatgaaaacaggggagacataccagccagcatctctctttcagaaata
gacccacttggccaaggaaatgacaagctgccgtttaagacagacactgagagatcacag
ctgggggagtcttcagtttcatacccaaatattatacatatagactcagagaatttgtca
gaaactgttaaagaaaactcccaggaagaaactccagagacaactgcaagtcctatagaa
taccaagataagctctacttgcacttaaaaaaaaacctcagcaaagtgaaagcatatgcc
atggaaattggaaagaagattccagtccctgatcagtgtaccattgaagatgagatgaat
attcatctgactagaaaacagtgcaaaataaaattggttgagcacatgcacactcttagg
acattttgtatggagatccaggagcagttatctgactga

>gi568815595f:157336934_157542976|GENSCAN_predicted_peptide_3|461_aa
MPTVDPIFLRGGLEELAYVDWGVHMQGKARVGTGLREGGPSGQETECGKMDRSQVVQKCI
PFLIGHLKDSTHNDIILNILIEIAVYEPVALNSFLPMLKEIGERFPYLTGQMARIYGAVG
HVDEASPPTLRITNQHEIWVATQIQTISKANLKENSSFGDTCMTLSGYQEKERPIARICE
ESNSMPLSAATAIVCVKSCALCLVFLTSWNMLAKHQGVFITSSLGSESWTLFKGGRSDFP
TLVSVREVGACLKKDRKPPLKIFGKRYVDGPEWPKTEDICVPCVHSAKDDLGEEDFNNQV
DMMTHSVDTIQALSPTTPVITQWTYEHSCHGVREGGYSWAQQHGRPLTKADLATAIADCP
VCQQQRPAMSPLYGTVPWGVQPATCGRLITLDHFHYGRDRICSYWNILTQDMDLPFLHAI
LLPRVPSMDLQNCLVDCHGITHSIAFDQGTHSTDRNAAMHS

>gi568815595f:157336934_157542976|GENSCAN_predicted_CDS_3|1386_bp
atgccgacagttgaccccatattcttgagaggtggcctagaagagcttgcatatgtggac
tggggtgttcacatgcagggcaaagccagggtgggaactggactgcgggaaggtggacca
agtgggcaagagactgaatgtgggaagatggataggagtcaggtagttcagaagtgtatt
cctttcctaattgggcatttgaaggattcaacccataatgacatcatcctaaacatcctc
atagagatagcagtctatgagccagtggctttgaacagttttcttccaatgctgaaagag
attggtgagagattcccctacctcactggacagatggcaaggatttatggagctgttggg
catgtggatgaagcctcacctccaacattgaggattacaaatcaacatgagatttgggtg
gcaacacagatccaaaccatatcaaaggctaacctgaaagagaacagttcatttggtgac
acttgtatgactctcagtgggtaccaggagaaggagagaccaatagcccgcatctgtgaa
gaatcaaatagcatgcccctgagtgcagccactgccatcgtgtgtgttaaatcctgtgcc
ctctgccttgtttttctaactagctggaatatgctggccaagcaccagggcgtgttcatt
acatcctctctgggctcagagtcatggacacttttcaaaggaggacgatctgactttcct
acactggtgtctgtgagggaagtaggtgcctgcctcaagaaagacaggaagccaccactt
aaaatttttgggaagagatatgtggatggacctgagtggccaaaaactgaagatatttgt
gtcccctgtgtacactcagcaaaggatgaccttggagaggaggattttaataatcaagtg
gatatgatgacccactctgttgacaccattcaggctctttccccaaccactcctgtcatc
acacaatggacttatgaacacagttgccatggtgtcagagaaggaggttattcatgggct
cagcaacatggacgtccactcacaaaggctgatctggctactgccatcgctgactgccct
gtctgccagcagcagagaccagcaatgagccctctatatggcactgttccttggggtgtt
cagccagctacctgtggcaggttgattacattggaccacttccattatggaagggacagg
atttgttcttactggaatattcttactcaggatatggatttgcctttcctacatgcaatt
cttctgccaagagtaccatccatggacttgcagaactgccttgtcgactgccatggtatt
acacatagcattgcttttgaccaaggaactcactctacagacagaaatgcggcaatgcat
tcgtga

>gi568815595f:157336934_157542976|GENSCAN_predicted_peptide_4|139_aa
MTERGQSTARAMTSEGVNPKPLQLPCGVDPVGAQKSRIEVWEPLPRFQRLYGNAWMSRQK
FAAGVGLSWRTSPKAVQKGNVGSEPPHRVPTGAPACESSQEGGCTLKSHRGGAAQDHGNP
CISVTRMRDMESMEIISEL

>gi568815595f:157336934_157542976|GENSCAN_predicted_CDS_4|420_bp
atgactgaaaggggccaaagtacagctcgggccatgacttcagaaggtgtaaaccccaag
cctttacaacttccatgtggtgttgatcctgtgggtgcacaaaagtcaagaattgaggtt
tgggaacctctgcctagatttcagaggctgtatggaaatgcctggatgtccagacagaag
tttgctgcaggggtagggctttcatggagaacctctcctaaggcagtgcagaagggaaac
gtggggtcagagcctccacacagagtccctactggggcaccagcctgtgaaagcagccag
gagggaggctgtaccttgaaaagtcacaggggtggagctgcccaagaccatgggaaccct
tgcatcagtgtgactcggatgcgagacatggagtcaatggagatcatttcggagctttaa

>gi568815595f:157336934_157542976|GENSCAN_predicted_peptide_5|381_aa
MHLLAILFCALWSAVLAENSDDYDLMYVNLDNEIDNGLHPTEDPTPCACGQEHSEWDKLF
IMLENSQMRERMLLQATDDVLRGELQRLREELGRLAESLARPCAPGAPAEARLTSALDEL
LQATRDAGRRLARMEGAEAQRPEEAGRALAAVLEELRQTRADLHAVQGWAARSWLPAGCE
TAILFPMRSKKIFGSVHPVRPMRLESFSACIWVKATDVLNKTILFSYGTKRNPYEIQLYL
SYQSIVFVVGGEENKLVAEAMVSLGRWTHLCGTWNSEEGLTSLWVNGELAATTVEMATGH
IVPEGGILQIGQEKNGCCVGGGFDETLAFSGRLTGFNIWDSVLSNEEIRETGGAESCHIR
GNIVGWGVTEIQPHGGAQYVS

>gi568815595f:157336934_157542976|GENSCAN_predicted_CDS_5|1146_bp
atgcatctccttgcgattctgttttgtgctctctggtctgcagtgttggccgagaactcg
gatgattatgatctcatgtatgtgaatttggacaacgaaatagacaatggactccatccc
actgaggaccccacgccgtgcgcctgcggtcaggagcactcggaatgggacaagctcttc
atcatgctggagaactcgcagatgagagagcgcatgctgctgcaagccacggacgacgtc
ctgcggggcgagctgcagaggctgcgggaggagctgggccggctcgcggaaagcctggcg
aggccgtgcgcgccgggggctcccgcagaggccaggctgaccagtgctctggacgagctg
ctgcaggcgacccgcgacgcgggccgcaggctggcgcgtatggagggcgcggaggcgcag
cgcccagaggaggcggggcgcgccctggccgcggtgctagaggagctgcggcagacgcga
gccgacctgcacgcggtgcagggctgggctgcccggagctggctgccggcaggttgtgaa
acagctattttattcccaatgcgttccaagaagatttttggaagcgtgcatccagtgaga
ccaatgaggcttgagtcttttagtgcctgcatttgggtcaaagccacagatgtattaaac
aaaaccatcctgttttcctatggcacaaagaggaatccatatgaaatccagctgtatctc
agctaccaatccatagtgtttgtggtgggtggagaggagaacaaactggttgctgaagcc
atggtttccctgggaaggtggacccacctgtgcggcacctggaattcagaggaagggctc
acatccttgtgggtaaatggtgaactggcggctaccactgttgagatggccacaggtcac
attgttcctgagggaggaatcctgcagattggccaagaaaagaatggctgctgtgtgggt
ggtggctttgatgaaacattagccttctctgggagactcacaggcttcaatatctgggat
agtgttcttagcaatgaagagataagagagaccggaggagcagagtcttgtcacatccgg
gggaatattgttgggtggggagtcacagagatccagccacatggaggagctcagtatgtt
tcataa

>gi568815595f:157336934_157542976|GENSCAN_predicted_peptide_6|61_aa
MDLVHSRYSIGDDKNNQNDDDDDDDDDRNHVFCSVELYRILSRPAFVGETQLGHYAFIKW
A

>gi568815595f:157336934_157542976|GENSCAN_predicted_CDS_6|186_bp
atggacctggtacacagcagatactcaattggtgatgacaaaaacaaccagaacgatgat
gatgatgatgatgatgatgatagaaatcatgtcttttgcagtgtggaattatatcgaata
ttaagccgtcctgcatttgtgggagaaactcaactaggtcattacgcatttataaagtgg
gcttaa

>gi568815595f:157336934_157542976|GENSCAN_predicted_peptide_7|207_aa
MHQLFRLVLGQKDLSRAGDLFSLDDSEIEDSLTEALEQIKIISSSSDYQTNNNDQAVVEI
CITRITTAIRETESIEKHAKALVGLWDSCLEHNLRPFGKDEDTPHAKIASDIMSCILQNY
NRPPVMALAIPIAVKFLHRGNKELCRNMSNYLSLAAITKADLLADHTEVIVKSILQGTWM
EPEAIILSKLTQEQETKYRMLSLISGS

>gi568815595f:157336934_157542976|GENSCAN_predicted_CDS_7|624_bp
atgcatcaactgttcagactggttttgggacaaaaagatctttcacgagctggggacctc
ttctccttagatgactctgagattgaagacagccttacagaagctttggagcaaattaag
ataattagctcatcttcagattaccaaaccaataacaatgaccaggcagtagttgaaatc
tgtatcacaagaatcacaacagccatcagagagaccgagtccattgaaaagcatgcaaag
gcccttgtggggctctgggactcctgcttggaacataacctgagaccctttgggaaagac
gaagacactcctcatgcaaaaatcgcatctgatatcatgagttgcattttacagaattac
aaccgacccccagtgatggcattagccatccccattgcagtgaaattcctccacagaggc
aacaaggaactgtgcaggaatatgtctaactacctgtctctggctgcaattaccaaggca
gatctcctggctgatcacacggaagttatagtaaagagcatactccaaggaacttggatg
gagccagaggctattatccttagcaagctaacacaggaacaggaaaccaaataccgcatg
ttgtcacttataagtgggagctaa

>gi568815595f:157336934_157542976|GENSCAN_predicted_peptide_8|51_aa
MDQSSVTHSMASTTLIMLPNVYVCTGVPKELLELLAVHILLSQLLFRSGKE

>gi568815595f:157336934_157542976|GENSCAN_predicted_CDS_8|156_bp
atggaccagtcctcggtgacccacagtatggcatctacaacactgataatgttgccaaat
gtttatgtatgcactggtgtccccaaagaattgctggaacttctggcagtgcatatcctg
ctgtcacagctcctttttcgttctggaaaagaatga

>gi568815595f:157336934_157542976|GENSCAN_predicted_peptide_9|75_aa
MVTQEGSKEQDPEKSAGKETNGGIFFSGRKHMITPDVQNDWKFLYLLGSCQFEILGAIVV
MRFLPGIISALKSED

>gi568815595f:157336934_157542976|GENSCAN_predicted_CDS_9|228_bp
atggtcactcaagaaggctccaaggaacaggatccagagaagagtgctggaaaagagaca
aatggtggcatattcttctcaggaagaaaacacatgattacacctgatgtccagaatgac
tggaagttcctctacctgctggggagctgccaatttgaaattcttggtgcaattgtagtg
atgagatttttacctgggattatttcagcacttaagagtgaggattga

>gi568815595f:157336934_157542976|GENSCAN_predicted_peptide_10|152_aa
XCGEEGKPGQRMARQRDQTVTPAGDWTITWPRTGPPPLQAAFPLCSHPAAVKALPLTHGL
HTHSCSTPNSHTLHGRKKEKDFADVIKDLGIGDFPALAVGPNAITSILRKKGRGPFHASA
YKRRRQCEQEAETEVMWPQAKGCQQPPEAGRG

>gi568815595f:157336934_157542976|GENSCAN_predicted_CDS_10|459_bp
nnatgcggagaagagggcaagccagggcagaggatggcacgacaacgggaccaaacagtg
acccctgcaggtgactggacgataacttggcctaggaccggccccccgccactgcaagct
gcgttccctctgtgctcacaccctgcagcagtcaaagcactcccactcacacacgggctg
cacacgcatagttgcagtacaccgaactcacacacactacacggaaggaaaaaagaaaaa
gactttgcagatgtgattaaagatttggggataggagattttccggcgttagcagtagga
cccaatgcaatcacaagcatccttagaaagaaaggcagagggcccttccatgcttccgca
tataagaggagaaggcaatgtgagcaggaagcagagactgaagtgatgtggccacaagcc
aagggatgccagcagccaccagaagctggaagaggctag