GENSCAN 1.0	Date run:  6-Nov-116	Time: 21:17:54

Sequence gi568815578f:38246517_38476666 : 230150 bp : 47.24% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1078   1269  192  0  0   60   90   179 0.569  14.27
 1.02 Term +  10570  10716  147  0  0  137   50    49 0.910   3.90
 1.03 PlyA +  11064  11069    6                              -0.45

 2.00 Prom +  12272  12311   40                              -4.66
 2.01 Init +  13983  14050   68  2  2   86   33   170 0.973   9.84
 2.02 Intr +  14590  14717  128  1  2   65   57   179 0.751  12.82
 2.03 Intr +  26040  26095   56  1  2   25   84    65 0.126  -1.50
 2.04 Intr +  31669  31745   77  0  2  126   72    31 0.653   3.61
 2.05 Term +  31976  32105  130  2  1   95   42    56 0.542  -0.65
 2.06 PlyA +  32189  32194    6                               1.05

 3.06 PlyA -  33124  33119    6                               1.05
 3.05 Term -  42271  42161  111  1  0   77   43   120 0.693   4.96
 3.04 Intr -  46067  45808  260  0  2   65   95   123 0.882   7.88
 3.03 Intr -  47852  47765   88  2  1   60   93    62 0.907   3.44
 3.02 Intr -  49124  48880  245  0  2   94   73    91 0.440   5.42
 3.01 Init -  53338  53323   16  1  1  103   64    28 0.395   0.38
 3.00 Prom -  54119  54080   40                              -7.36

 4.00 Prom +  56035  56074   40                              -8.66
 4.01 Init +  57708  57837  130  2  1   98   45   201 0.964  15.17
 4.02 Intr +  61051  61165  115  2  1  131   94   108 0.997  15.21
 4.03 Intr +  62414  62542  129  2  0  105   32   175 0.996  13.41
 4.04 Intr +  63975  64136  162  0  0  105   39   174 0.995  13.29
 4.05 Intr +  65358  65421   64  0  1  113   91    59 0.916   7.42
 4.06 Term +  65741  65749    9  1  0  106   38     0 0.307  -5.01
 4.07 PlyA +  66868  66873    6                              -0.45

 5.02 PlyA -  67079  67074    6                              -3.24
 5.01 Sngl -  68428  67541  888  1  0   56   37  1867 0.640 174.49
 5.00 Prom -  70059  70020   40                              -7.66

 6.00 Prom +  71261  71300   40                              -6.96
 6.01 Init +  71472  71489   18  2  0   44  110     5 0.725  -1.44
 6.02 Intr +  71897  71960   64  1  1  117   94    84 0.829  10.19
 6.03 Intr +  73667  73758   92  0  2   89  100    89 0.890   9.91
 6.04 Intr +  77354  77530  177  1  0   93   91   127 0.992  13.62
 6.05 Intr +  78222  78317   96  2  0   94   64    28 0.527   1.21
 6.06 Intr +  79824  79916   93  2  0   61  103   107 0.478   9.66
 6.07 Intr +  81072  81139   68  2  2   69   97   106 0.955   7.30
 6.08 Intr +  84532  84574   43  1  1  111  117    23 0.619   5.74
 6.09 Intr +  87914  87977   64  1  1   93  103    27 0.276   2.99
 6.10 Intr +  89082  89158   77  1  2   83  109    -6 0.108   0.23
 6.11 Term +  90630  90668   39  2  0  108   49    41 0.286  -0.61
 6.12 PlyA +  93877  93882    6                               1.05

 7.00 Prom +  94578  94617   40                              -5.16
 7.01 Init + 100001 100124  124  1  1   60   95   157 0.812  11.95
 7.02 Intr + 103032 103146  115  1  1   86   75    95 0.999   7.51
 7.03 Intr + 104295 104423  129  0  0  122   89    95 0.964  12.81
 7.04 Intr + 107768 107923  156  2  0   74   61   206 0.946  15.63
 7.05 Intr + 108830 108893   64  2  1   86   90    98 0.969   8.52
 7.06 Intr + 114188 114251   64  1  1  123   91    33 0.968   5.39
 7.07 Intr + 117459 117550   92  1  2  111  100   133 0.947  16.51
 7.08 Intr + 118060 118236  177  0  0   79   77   164 0.934  14.52
 7.09 Intr + 120199 120312  114  0  0   77   90    73 0.663   7.04
 7.10 Intr + 122479 122646  168  0  0   82   79   130 0.992  11.64
 7.11 Intr + 124222 124289   68  0  2   99  106    56 0.999   6.20
 7.12 Intr + 124764 124806   43  0  1   95  101    39 0.971   4.14
 7.13 Intr + 126556 126619   64  0  1  132   95    94 0.990  12.79
 7.14 Intr + 127421 127497   77  0  2   62   71    93 0.833   4.23
 7.15 Intr + 130561 130683  123  0  0  103    7    73 0.107   1.48
 7.16 Intr + 134881 134954   74  0  2   13  110    68 0.027  -0.30
 7.17 Intr + 142363 142410   48  1  0  101   75    42 0.147   2.00
 7.18 Term + 146151 146241   91  0  1  125   42    65 0.654   2.79
 7.19 PlyA + 146306 146311    6                               1.05

 8.10 PlyA - 148965 148960    6                               1.05
 8.09 Term - 156222 156089  134  1  2  113   54   164 0.988  13.75
 8.08 Intr - 174874 174836   39  2  0   99   75    45 0.252   2.50
 8.07 Intr - 175852 175775   78  2  0  126   81    22 0.756   4.82
 8.06 Intr - 184596 184525   72  1  0   84  111    16 0.790   2.88
 8.05 Intr - 186008 185974   35  1  2   73   65    50 0.742  -0.93
 8.04 Intr - 188110 187988  123  0  0   98  106    63 0.762   8.80
 8.03 Intr - 188810 188681  130  0  1   28  100    63 0.781   1.25
 8.02 Intr - 189198 189016  183  1  0   36    2   144 0.367   0.36
 8.01 Init - 194318 194237   82  2  1   64   61   101 0.605   6.14
 8.00 Prom - 217724 217685   40                              -4.16

 9.00 Prom + 217929 217968   40                              -5.46
 9.01 Init + 222453 222462   10  2  1   67   78     0 0.249  -2.52
 9.02 Term + 226283 226485  203  0  2   16   54   255 0.800  12.45
 9.03 PlyA + 229017 229022    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578f:38246517_38476666|GENSCAN_predicted_peptide_1|112_aa
MTSNDALILISGTCERAVTRQRGVKATNGIKFANQLTLKQGDHPGLDKWAQCNHQVEEDA
EEGRDTCASRQKDGPPPPIRHSLELSVDEPAFSMDCQPPKQEPRPYRGPGTQ

>gi568815578f:38246517_38476666|GENSCAN_predicted_CDS_1|339_bp
atgacctccaatgacgccctcatcctaatctctggaacctgtgaacgtgctgttacaaga
caaaggggagttaaggctaccaatggaattaagtttgctaatcagctgactttaaaacaa
ggagaccatcctggattagacaaatgggcccagtgtaatcaccaggtggaagaggatgca
gaagagggaagggacacatgtgcttccaggcagaaggatggacccccaccacccatcaga
cacagcctagaattatctgtggatgaacctgccttctccatggactgccagcccccaaag
caggaaccacgtccttatagagggcctggcacacagtag

>gi568815578f:38246517_38476666|GENSCAN_predicted_peptide_2|152_aa
MVTGCQRRAARLLSWARGLWVRGESQTLLSFDFFICKMGWEEDDDDDDDDDDDDDSACCL
DLVMRSGEELRLLLANGRHQLASHGRPLSLYGPTSELWGYPRTPQASSLRESSKTVLQEP
TRAAFTWFLIKQSLGSAEWEWVFMDLAVETSE

>gi568815578f:38246517_38476666|GENSCAN_predicted_CDS_2|459_bp
atggtgacgggctgccagcggcgggcggcgcggctcctctcctgggcgcggggtctgtgg
gtccgcggggagtcacagactctcttaagcttcgatttcttcatctgtaaaatggggtgg
gaggaggatgatgatgatgatgatgatgatgatgatgatgatgatagtgcctgctgctta
gatttggtgatgaggagtggcgaggaactgaggcttcttcttgccaatggccggcaccaa
cttgccagccatggacggcccctttccctctatggccccacttcagagctctggggctac
ccaaggacaccccaggcctcttccttacgggagtcctccaagactgtcctccaggagcct
acacgtgctgctttcacctggtttcttataaagcagagtctcgggtctgcggagtgggaa
tgggtcttcatggatctagctgttgaaacatcagaatga

>gi568815578f:38246517_38476666|GENSCAN_predicted_peptide_3|239_aa
MVGGRGAQAPSWSPTPAKEISLKPTPAPSPLCFTSPRGKAHFLNRLTGPSTSHPIGSRTA
TFKYNHPGAYDHADFQKQAPRPDPEYRKPGPRSVTIKRPLSQRKMTKLNGCLVENPAHYW
ILTWAFHGLSKIFTHRMPQRALPATKCLLCTLPCAASSPRSEQSLLVPRSCCQSNWVQDN
HCTTKPLLMNSYCFPGQGWCFPQGCPEEALHLDISHRHGDTQRSIVHLERNQIAINNRT

>gi568815578f:38246517_38476666|GENSCAN_predicted_CDS_3|720_bp
atggtgggaggccgaggtgcccaggctccaagctggtcacctacacctgccaaagagatc
tctctgaagccgacaccagcaccatcccccctctgcttcacatcaccaaggggcaaggcc
cacttccttaacaggctcacagggccctccacatcccaccccattggttctcgcactgcc
actttcaagtacaaccacccaggagcttatgaccacgcagatttccaaaagcaagcccca
cgccctgatcctgagtacaggaaacctgggcctaggtctgtcaccatcaaacggccactg
tcccagaggaagatgactaagctaaatggatgcctggtggaaaacccagcacattactgg
attctgacatgggccttccatgggctcagcaagatattcacccataggatgccccagagg
gccctgccagccaccaagtgcctactgtgcaccttgccctgtgctgcaagctccccaagg
agtgaacagtcgctcctcgtgccccgaagctgctgccaatccaactgggtacaagacaac
cactgtacaacaaagccactcttgatgaactcctactgttttccaggccagggctggtgc
tttccacagggatgcccggaagaagccttgcatctggatatcagccacagacacggagat
actcaaagaagcattgtgcacctggagagaaaccagatcgccattaacaatcgaacatag

>gi568815578f:38246517_38476666|GENSCAN_predicted_peptide_4|202_aa
MARGPCNAPRWASLMVLVAIGTAVTAAVNPGVVVRISQKGLDYASQQGTAALQKELKRIK
IPDYSDSFKIKHLGKGHYSFYSMDIREFQLPSSQISMVPNVGLKFSISNANIKISGKWKA
QKRFLKMSGNFDLSIEGMSISADLKLGSNPTSGKPTITCSSCSSHINSVHVHISKSKVGW
LIQLFHKKIESALRNKMNSQPC

>gi568815578f:38246517_38476666|GENSCAN_predicted_CDS_4|609_bp
atggccaggggcccttgcaacgcgccgagatgggcgtccctgatggtgctggtcgccata
ggcaccgccgtgacagcggccgtcaaccctggcgtcgtggtcaggatctcccagaagggc
ctggactacgccagccagcaggggacggccgctctgcagaaggagctgaagaggatcaag
attcctgactactcagacagctttaagatcaagcatcttgggaaggggcattatagcttc
tacagcatggacatccgtgaattccagcttcccagttcccagataagcatggtgcccaat
gtgggccttaagttctccatcagcaacgccaatatcaagatcagcgggaaatggaaggca
caaaagagattcttaaaaatgagcggcaattttgacctgagcatagaaggcatgtccatt
tcggctgatctgaagctgggcagtaaccccacgtcaggcaagcccaccatcacctgctcc
agctgcagcagccacatcaacagtgtccacgtgcacatctcaaagagcaaagtggggtgg
ctgatccaactcttccacaaaaaaattgagtctgcgcttcgaaacaagatgaacagccag
ccctgctag

>gi568815578f:38246517_38476666|GENSCAN_predicted_peptide_5|295_aa
MPIKSVYTYHHHHHHHHHQSHHHHHHHHHHHLHHYHHHYHHPHHHHHQSHHTTIIIIPTI
TITTIIIPTITIIIIIPTITITTIIIPTITITIIIIIPTITITTIIIPTITITIIIIIPT
IIITTIIIPTITITIIIIIPTITVTIIIPTITITIIIIIPTITIIIIIIPTITIIIIIPT
ITIINLTITTIIIIIPTITITTIIIPTITITITIIIIIIPTITIINLTITTIIIIFPTIT
ITTIIIPTITITIIIIIIPTITILNLTTTIIIIIFPTITITTIIIPSPSSSSTSP

>gi568815578f:38246517_38476666|GENSCAN_predicted_CDS_5|888_bp
atgcctattaaatcggtgtatacttaccaccatcaccatcaccatcaccatcatcagtct
caccatcaccatcaccatcatcatcatcatcatctccaccattaccatcaccattatcat
catccccaccatcaccatcatcaatctcaccataccaccatcatcatcatccccaccatt
accatcaccaccatcatcatccccaccatcaccatcattatcatcatccccaccatcacc
atcaccaccatcatcatccccaccatcaccatcaccatcattatcatcatccccaccatc
accatcaccaccatcatcatccccaccatcaccatcaccattattatcatcatccccacc
atcatcatcaccaccatcatcatccccaccatcaccatcaccatcattatcatcatccct
accatcaccgtcaccatcatcatccccaccatcaccatcaccatcattatcatcatcccc
accatcaccatcatcattataatcatccccaccatcaccatcatcatcatcatccccacc
atcaccatcatcaatctcaccatcaccaccatcatcatcatcatccccaccattaccatc
accaccatcatcatccccactatcaccatcaccatcaccatcatcattatcatcatcccc
accatcaccatcatcaatctcaccatcaccaccatcatcatcatcttccccaccattacc
atcaccaccatcatcatccccaccatcaccatcaccatcattattatcatcatccccacc
atcaccatcctcaatctcaccaccaccatcatcatcatcatcttccccaccattaccatc
accaccatcatcatcccatcaccatcatcatcatcaacctcaccataa

>gi568815578f:38246517_38476666|GENSCAN_predicted_peptide_6|276_aa
MLPEAQVCEKVTNSVSSELQPYFQTLPVMTKIDSVAGINYGLVAPPATTAETLDVQMKGE
FYSENHHNPPPFAPPVMEFPAAHDRMVYLGLSDYFFNTAGLVYQEAGVLKMTLRDDMHPP
RSFSHLLLQIPKESKFRLTTKFFGTFLPEPTGLTFYPAVDVQAFAVLPNSSLASLFLIGM
HTTGSMEVSAESNRLVGELKLDRLLLELKHSNIGPFPVELLQDIMNYIVPILVLPRVNEK
LQKGFPLPTPARVQLYNVVLQPHQNFLLFGADVVYK

>gi568815578f:38246517_38476666|GENSCAN_predicted_CDS_6|831_bp
atgctcccagaagcccaggtctgcgagaaagtgaccaattctgtatcctccgagctgcaa
ccttatttccagactctgccagtaatgaccaaaatagattctgtggctggaatcaactat
ggtctggtggcacctccagcaaccacggctgagaccctggatgtacagatgaagggggag
ttttacagtgagaaccaccacaatccacctccctttgctccaccagtgatggagtttccc
gctgcccatgaccgcatggtatacctgggcctctcagactacttcttcaacacagccggg
cttgtataccaagaggctggggtcttgaagatgacccttagagatgacatgcatcctccg
agatccttttctcatctcttgctacagattccaaaggagtccaaatttcgactgacaacc
aagttctttggaaccttcctacctgagcccaccggccttaccttctaccctgccgtggat
gtccaggcctttgccgtcctccccaactcctccctggcttccctcttcctgattggcatg
cacacaactggttccatggaggtcagcgccgagtccaacaggcttgttggagagctcaag
ctggataggctgctcctggaactgaagcactcaaatattggccccttcccggttgaattg
ctgcaggatatcatgaactacattgtacccattcttgtgctgcccagggttaacgagaaa
ctacagaaaggcttccctctcccgacgccggccagagtccagctctacaacgtagtgctt
cagcctcaccagaacttcctgctgttcggtgcagacgttgtctataaatga

>gi568815578f:38246517_38476666|GENSCAN_predicted_peptide_7|596_aa
MGALARALPSILLALLLTSTPEALGANPGLVARITDKGLQYAAQEGLLALQSELLRITLP
DFTGDLRIPHVGRGRYEFHSLNIHSCELLHSALRPVPGQGLSLSISDSSIRVQGRWKVRK
SFFKLQGSFDVSVKGISISVNLLLGSESSGRPTVTASSCSSDIADVEVDMSGDLGWLLNL
FHNQIESKFQKVLESRICEMIQKSVSSDLQPYLQTLPVTTEIDSFADIDYSLVEAPRATA
QMLEVMFKGEIFHRNHRSPVTLLAAVMSLPEEHNKMVYFAISDYVFNTASLVYHEEGYLN
FSITDDMTFSSSGSTLKLLHVSLLQIPPDSNIRLTTKSFRPFVPRLARLYPNMNLELQGS
VPSAPLLNFSPGNLSVDPYMEIDAFVLLPSSSKEPVFRLSVATNVSATLTFNTSKITGFL
KPGKVKVELKESKVGLFNAELLEALLNYYILNTFYPKFNDKLAEGFPLPLLKRVQLYDLG
LQIHKGSLDSQPHLWSPRPLSHRRCYGSLNERTRDSVHHVALDLALFCLNGLSSSNSLEI
GIHDISNEALRLTGFRELHPVGVPGESQLDVDILTPKVTWDKCVEDGRASSSSLGP

>gi568815578f:38246517_38476666|GENSCAN_predicted_CDS_7|1791_bp
atgggggccttggccagagccctgccgtccatactgctggcattgctgcttacgtccacc
ccagaggctctgggtgccaaccccggcttggtcgccaggatcaccgacaagggactgcag
tatgcggcccaggaggggctattagctctgcagagtgagctgctcaggatcacgctgcct
gacttcaccggggacttgaggatcccccacgtcggccgtgggcgctatgagttccacagc
ctgaacatccacagctgtgagctgcttcactctgcgctgaggcctgtccctggccagggc
ctgagtctcagcatctccgactcctccatccgggtccagggcaggtggaaggtgcgcaag
tcattcttcaaactacagggctcctttgatgtcagtgtcaagggcatcagcatttcggtc
aacctcctgttgggcagcgagtcctccgggaggcccacagttactgcctccagctgcagc
agtgacatcgctgacgtggaggtggacatgtcgggagacttggggtggctgttgaacctc
ttccacaaccagattgagtccaagttccagaaagtactggagagcaggatttgcgaaatg
atccagaaatcagtgtcctccgatctacagccttatctccaaactctgccagttacaaca
gagattgacagtttcgccgacattgattatagcttagtggaagcccctcgggcaacagcc
cagatgctggaggtgatgtttaagggtgaaatctttcatcgtaaccaccgttctccagtt
accctccttgctgcagtcatgagccttcctgaggaacacaacaaaatggtctactttgcc
atctcggattatgtcttcaacacggccagcctggtttatcatgaggaaggatatctgaac
ttctccatcacagatgacatgaccttcagctccagcgggagcaccctaaaacttcttcat
gtctctttgctgcagataccgcctgactctaatatccgactgaccaccaagtccttccga
cccttcgtcccacggttagccaggctctaccccaacatgaacctggaactccagggatca
gtgccctctgctccgctcctgaacttcagccctgggaatctgtctgtggacccctatatg
gagatagatgcctttgtgctcctgcccagctccagcaaggagcctgtcttccggctcagt
gtggccactaatgtgtccgccaccttgaccttcaataccagcaagatcactgggttcctg
aagccaggaaaggtaaaagtggaactgaaagaatccaaagttggactattcaatgcagag
ctgttggaagcgctcctcaactattacatccttaacaccttctaccccaagttcaatgat
aagttggccgaaggcttcccccttcctctgctgaagcgtgttcagctctacgaccttggg
ctgcagatccataaggggtctttggatagtcagccacatctatggtctccaaggcccctt
tctcatcgccgctgctatgggagcctcaatgagagaaccagggattctgtacatcatgta
gccctggatctggcgctgttctgtctgaatggcctgagcagcagcaacagcctagaaatt
ggaatacatgatatttctaatgaggctctcagactaactggatttagggagctgcaccca
gttggtgtgccaggggaaagccagctggatgtcgatatattgacacccaaggtgacttgg
gataaatgtgttgaagatggcagagcctccagcagcagtctaggtccctga

>gi568815578f:38246517_38476666|GENSCAN_predicted_peptide_8|291_aa
MDRYNKICSTVVTLGVEMGLELLQALHGTEYSGESKTDAFGPLQKEVQTKHSPLIVVTAP
IMENWPFLQINNESVTKEHLQNKQKSKAILRRPSPSFAIARHRTPSLEICRHLDFSHAVC
QVSAATRRQGAGPCGLCCTSDGFAPASALSLLQHSDLHPLRGFHCPRGENAPGIVIVMSA
TKARGVSHDCRPMCVRGVLWESMDPEVPDGSAVCRGSMGCVVFIVAGRWTMGPQGTISNV
EQMEKVAGSSSSNNNNNKIAEQIMEEHAIYNECGRSEQIGKRTFADSEIDT

>gi568815578f:38246517_38476666|GENSCAN_predicted_CDS_8|876_bp
atggacagatacaacaaaatctgcagcacggtggtcactcttggtgtggagatgggtctg
gagctcctgcaggccttgcatggtactgagtacagtggtgaatcaaagacagatgccttt
ggacccttgcagaaagaagtccaaactaagcacagtcccctcatcgtagtaacagctcct
atcatggaaaattggccattcctacagattaataatgaatcagtgaccaaggaacatctt
cagaacaaacagaaaagcaaagcaatccttcgccgtccctcgccgtccttcgccatcgca
cgccaccgcaccccatctctcgaaatctgcagacatcttgatttttcccacgctgtctgt
caggtctccgccgccactcgacgccagggcgccgggccttgtgggctgtgctgcacctcg
gacggcttcgcaccagccagcgccctctctctcctgcagcactctgatctgcaccccctg
aggggcttccactgtccgcggggtgagaatgcccctgggattgtcattgtgatgtcagcg
accaaagccagaggagtgtcacatgactgccgccccatgtgtgtgagaggcgtcctctgg
gagagcatggatcctgaggtcccagatgggtctgctgtgtgcagaggctccatgggatgt
gttgtcttcatagtagcagggcgctggaccatgggtccgcaaggcaccatcagtaatgtc
gaacaaatggagaaagttgcaggtagcagcagcagcaacaacaacaacaacaaaatagca
gagcaaattatggaagagcatgccatctataatgaatgtggcagatctgagcaaattggc
aagcgtacctttgcagactcagagatagatacttga

>gi568815578f:38246517_38476666|GENSCAN_predicted_peptide_9|70_aa
MGRVAHLAGELFDAAAPGSRKLPEQIPAGWLEWPSSSLGALGESLTGGLTDRLRTAGQGG
ESASPMARVA

>gi568815578f:38246517_38476666|GENSCAN_predicted_CDS_9|213_bp
atgggtagggtggcccacttggctggggagttatttgacgccgccgcccctggcagtcgg
aagttgcctgagcagatcccagccggctggctcgagtggccttcgtcgtcccttggcgcc
ctgggagagtcgctgacgggtggactgacggaccgcctgaggacggccggccagggcggt
gaaagcgccagccctatggcgcgggtcgcgtga