GENSCAN 1.0	Date run:  6-Nov-116	Time: 21:21:07

Sequence gi568815597r:241397831_241619722 : 221892 bp : 38.92% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  12822  12901   80  0  2   63  100    75 0.021   4.48
 1.02 Intr +  21290  21441  152  0  2   84   94    31 0.004   2.26
 1.03 Term +  25975  26313  339  0  0   -8   45   264 0.015   6.05
 1.04 PlyA +  27602  27607    6                               1.05

 2.04 PlyA -  28393  28388    6                               1.05
 2.03 Term -  32188  31916  273  1  0   68   38   174 0.459   4.89
 2.02 Intr -  32743  32533  211  0  1   54   30   127 0.420   1.49
 2.01 Init -  38654  38527  128  2  2   75  109   157 0.461  16.18
 2.00 Prom -  41348  41309   40                              -8.75

 3.04 PlyA -  41624  41619    6                               1.05
 3.03 Term -  46088  45982  107  0  2   92   45    82 0.118   1.89
 3.02 Intr -  48465  48375   91  0  1   91   20    91 0.086   1.25
 3.01 Init -  58319  58122  198  2  0   81   91   164 0.772  14.95
 3.00 Prom -  59501  59462   40                              -5.25

 4.00 Prom +  65311  65350   40                              -8.45
 4.01 Sngl +  68804  69199  396  1  0   86   50   227 0.739  14.70
 4.02 PlyA +  70251  70256    6                               1.05

 5.14 PlyA -  70821  70816    6                               1.05
 5.13 Term -  78578  78484   95  0  2   76   42    40 0.048  -4.79
 5.12 Intr -  85885  85781  105  2  0   13  115   153 0.800   9.77
 5.11 Intr -  97118  97027   92  1  2  114   63    43 0.182   3.12
 5.10 Intr - 100140 100002  139  1  1  107   -6   109 0.061   2.00
 5.09 Intr - 102760 102607  154  1  1   80   97    71 0.965   5.92
 5.08 Intr - 104740 104613  128  2  2   21  103   122 0.947   6.48
 5.07 Intr - 106415 106212  204  0  0   80   89   223 0.988  19.85
 5.06 Intr - 108338 108173  166  2  1  115   92   164 0.999  18.11
 5.05 Intr - 110955 110773  183  0  0   24   80   261 0.909  17.96
 5.04 Intr - 114313 114137  177  1  0   94   82   122 0.931  11.39
 5.03 Intr - 115883 115773  111  2  0   47   75   150 0.995   9.26
 5.02 Intr - 119486 119352  135  2  0   80  100   149 0.999  15.14
 5.01 Init - 121892 121761  132  2  0   80   89   188 0.999  16.29
 5.00 Prom - 125116 125077   40                              -6.75

 6.00 Prom + 134516 134555   40                              -4.45
 6.01 Init + 137719 137775   57  0  0   61   93    37 0.078   2.86
 6.02 Intr + 150999 151068   70  2  1  108  102    30 0.146   4.24
 6.03 Intr + 151847 151944   98  0  2   54   80   127 0.168   7.31
 6.04 Intr + 153125 153214   90  1  0   78   96    22 0.394   1.27
 6.05 Intr + 164299 164502  204  0  0   25   95   112 0.003   4.07
 6.06 Intr + 168661 168782  122  0  2  138   89    95 0.997  12.97
 6.07 Intr + 168981 169170  190  0  1    6   87   174 0.975   7.77
 6.08 Intr + 188849 188906   58  1  1  110   83    71 0.295   6.34
 6.09 Term + 189947 189966   20  0  2   94   55     8 0.102  -4.40
 6.10 PlyA + 191563 191568    6                               1.05

 7.07 PlyA - 191714 191709    6                               1.05
 7.06 Term - 196861 196598  264  1  0   72   49   217 0.652  10.72
 7.05 Intr - 200167 199916  252  1  0  117  121   110 0.998  13.91
 7.04 Intr - 206749 206430  320  2  2  117  101   215 0.863  20.45
 7.03 Intr - 207678 207567  112  0  1   29   17   145 0.437   0.53
 7.02 Intr - 218106 218024   83  1  2   70   85    88 0.099   5.14
 7.01 Intr - 220875 220750  126  1  0   25   38   138 0.064   2.23

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  12400  12210  191  2  2   81   28   156 0.942   5.53
S.002 Sngl +  65667  65975  309  2  0   47   49   194 0.806   7.05
S.003 Intr + 164337 164502  166  0  1   82   95   158 0.966  14.94


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:241397831_241619722|GENSCAN_predicted_peptide_1|190_aa
XKKTEHEARDMISCTSTQTCFYTGYQEGSFQLGKIVGGGGGGEEAGLGNITSPLPRVRGS
ITTYSEARINIEVKKCVSQQAVLSGRCHRAGCSGKVQAVAAGAAVGAAVAAVGALCHASP
VRRVPKAADYTSPTLLQQGGSHLAGLPTHPSRPSPLRTLATCHRCRPPPLQGGCTEGADR
LRSPPPWGLQ

>gi568815597r:241397831_241619722|GENSCAN_predicted_CDS_1|573_bp
nntaaaaagacagaacacgaggcccgtgatatgatcagctgcacatcaactcagacatgc
ttctacacaggataccaggaaggaagctttcagcttgggaaaattgtgggcgggggtggc
ggaggggaagaggcaggactggggaatattacttctcctcttcctcgagtcagagggagt
attactacatactctgaagccagaataaacattgaagtgaaaaaatgtgttagccagcag
gcagtcctgagcggccgctgccatcgcgccggctgcagcggaaaggtacaagcggtggcg
gcaggagccgctgtgggagcagcagtggcggcagtgggagccctgtgccacgcgtcccct
gtgcgccgtgtccccaaggcagctgactacacctcccccaccctcctgcagcagggtgga
tcccacctagcgggactccccacccacccctccaggccttctccactccggactctggcc
acttgccaccgttgtcgcccgccgccgctgcagggagggtgcacggagggagcagaccgt
ctccggagcccgccgccctgggggctgcagtga

>gi568815597r:241397831_241619722|GENSCAN_predicted_peptide_2|203_aa
MVYGASEAIGQRQSSAAKPRRSGKKSVREPWARVPGALGVDARAPGGCGHNFSRLKGSCL
LALKRAADLPAQRSSSAKGQTASSSGTLTPMPPDWETTPSRSRQTPHTGELWLDYNSLPA
REQNWMENEFDELTEVGFSRWVIRNSSELKEHVLTQCKEARNLEKRLEKLLTRITRIEKN
INNLMELKNTARELREVCTSINS

>gi568815597r:241397831_241619722|GENSCAN_predicted_CDS_2|612_bp
atggtctacggggcttctgaggcaatcgggcagcgtcagtcttcagctgctaagccgaga
agatctgggaagaagtcagtcagagagccttgggccagagttccaggggctctgggagtg
gatgccagagcacctggcggctgtgggcacaacttcagcagacttaaaggctcctgcctg
ctggctctgaagagagcagcagatctcccagcacagcgctcgagctctgctaagggacag
actgcctcctcaagtgggaccctgacccccatgcctcctgactgggagacaactcccagc
aggagtcgacagacacctcatacaggagagctctggctggattacaactcattgccagca
agggaacaaaactggatggagaatgagtttgacgaattgacagaagtaggcttcagcagg
tgggtaatcagaaactcctctgagctaaaggagcatgttctaacccaatgcaaggaagct
aggaaccttgaaaaaaggttagagaaattgctaactagaataaccagaatagagaagaac
ataaataacctgatggagctgaaaaacacagcacgagaacttcgtgaagtatgcacaagt
atcaatagctga

>gi568815597r:241397831_241619722|GENSCAN_predicted_peptide_3|131_aa
MWEDPDEPGVTEPLNSDEPSLPEGDVSPAPVEEASPALLTAASPVSEVLACPPLSEGFNP
ALLEKMTHWGRGWVPKTPGDPTPVDCLSSAHAEAVMEGPFEEDPTINHSTRVPISDFWET
QCKTLAVVYAE

>gi568815597r:241397831_241619722|GENSCAN_predicted_CDS_3|396_bp
atgtgggaagaccctgatgaacctggagttactgagcccctaaattctgatgaaccttct
ttgccagagggagatgtctccccagccccagtagaagaggcctccccagccctactgaca
gcagcctccccagtgtcagaggtattggcctgtccacctctgtctgaggggtttaaccct
gcattgcttgagaaaatgacacactggggcaggggttgggtccccaagactccaggggat
cctactcccgtggattgtctgagctcagctcatgctgaagctgttatggagggtcctttt
gaggaggatcccacaataaatcacagcacaagagtccccatctcagacttttgggaaaca
caatgtaagacactcgctgtggtatatgcagagtga

>gi568815597r:241397831_241619722|GENSCAN_predicted_peptide_4|131_aa
MVESKGEAGTSYMARAEGRERGREKCYTLLNNQLSQEFTHYHRNSTKGEGVKPFRRNCPH
DWIIIFHQALPPTLEITIRHEIWAGTQIQNISDLKAVMETTNKRKAPEMCVQGVHKRAKR
PMWLEDSKHGI

>gi568815597r:241397831_241619722|GENSCAN_predicted_CDS_4|396_bp
atggtggaaagcaaaggggaagcaggcacatcttacatggccagagcagaaggaagagag
agagggagggagaagtgctacacacttttaaacaaccagctttcacaggaattcactcac
tatcataggaacagcaccaagggggaaggtgttaaaccattcaggagaaactgcccccat
gattggataatcatcttccaccaggccctacctccaacgttggagattacaattcgacat
gagatttgggcagggacacagatccaaaacatatcagacctaaaagcagtcatggagacc
actaacaagcgcaaagcccctgagatgtgcgttcagggtgttcacaaaagagcaaagagg
ccgatgtggctggaagatagtaagcacgggatatga

>gi568815597r:241397831_241619722|GENSCAN_predicted_peptide_5|606_aa
MYRALRLLARSRPLVRAPAAALASAPGLGGAAVPSFWPPNAARMASQNSFRIEYDTFGEL
KVPNDKYYGAQTVRSTMNFKIGGVTERMPTPVIKAFGILKRAAAEVNQDYGLDPKIANAI
MKAADEVAEGKLNDHFPLVVWQTGSGTQTNMNVNEVISNRAIEMLGGELGSKIPVHPNDH
VNKSQSSNDTFPTAMHIAAAIEVHEVLLPGLQKLHDALDAKSKEFAQIIKIGRTHTQDAV
PLTLGQEFSGYVQQVKYAMTRIKAAMPRIYELAAGGTAVGTGLNTRIGFAEKVAAKVAAL
TGLPFVTAPNKFEALAAHDALVELSGAMNTTACSLMKIANDIRFLGSGPRSGLGELILPE
NEPGSSIMPGKVNPTQCEAMTMVAAQVMGNHVAVTVGGSNGHFELNVFKPMMIKNVLHSA
RLLGDASVSFTENCVVGIQANTERINKLMNESLMLVTALNPHIGYDKAAKIAKTAHKNGS
TLKETAIELGYLTAEQFDEWVKPKDMLGPNVLLVFAAERNLGETNVIIEKGWYYKDEIKT
DSTSQLSLKAGQSVDSCCVQTAAQEKEDRGEGVEDGPFHDTWVLQELQYEIWVGTQPNLI
SVDLKY

>gi568815597r:241397831_241619722|GENSCAN_predicted_CDS_5|1821_bp
atgtaccgagcacttcggctcctcgcgcgctcgcgtcccctcgtgcgggctccagccgca
gccttagcttcggctcccggcttgggtggcgcggccgtgccctcgttttggcctccgaac
gcggctcgaatggcaagccaaaattccttccggatagaatatgatacctttggtgaacta
aaggtgccaaatgataagtattatggcgcccagaccgtgagatctacgatgaactttaag
attggaggtgtgacagaacgcatgccaaccccagttattaaagcttttggcatcttgaag
cgagcggccgctgaagtaaaccaggattatggtcttgatccaaagattgctaatgcaata
atgaaggcagcagatgaggtagctgaaggtaaattaaatgatcattttcctctcgtggta
tggcagactggatcaggaactcagacaaatatgaatgtaaatgaagtcattagcaataga
gcaattgaaatgttaggaggtgaacttggcagcaagatacctgtgcatcccaacgatcat
gttaataaaagccagagctcaaatgatacttttcccacagcaatgcacattgctgctgca
atagaagttcatgaagtactgttaccaggactacagaagttacatgatgctcttgatgca
aaatccaaagagtttgcacagatcatcaagattggacgtactcatactcaggatgctgtt
ccacttactcttgggcaggaatttagtggttatgttcaacaagtaaaatatgcaatgaca
agaataaaagctgccatgccaagaatctatgagctcgcagctggaggcactgctgttggt
acaggtttaaatactagaattggctttgcagaaaaggttgctgcaaaagtggctgcactt
acaggcttgccttttgtcactgctccgaataaatttgaagctctggctgctcatgacgct
ctggttgagctcagtggagccatgaacactactgcctgcagtctgatgaagatagcaaat
gatattcgatttttgggttctggtcctcggtcaggtctgggagaattgatcttgcctgaa
aatgaaccaggaagcagtatcatgccaggcaaggtgaaccctactcagtgtgaagcaatg
accatggttgcagcccaagtcatggggaaccatgttgctgtcactgtcggaggcagcaat
ggacattttgagttgaatgttttcaagccaatgatgattaaaaatgtgttacactcagcc
aggctgctgggggatgcttcagtttcctttacagaaaactgcgtggtgggaatccaggcc
aatacagaaaggatcaacaagctgatgaatgagtctctaatgttggtgacagctctcaat
cctcatatagggtatgacaaggcagcaaagattgctaagacagcacacaaaaatggatca
accttaaaggaaactgctatcgaacttggctatctcacagcagagcagtttgacgaatgg
gtaaaacctaaggacatgctgggtccaaatgtccttttggtctttgcagcagaaagaaat
ctgggagagacaaatgtaataatagaaaaagggtggtattataaagacgagattaaaact
gactccacaagccagttatctctgaaggctggacagtctgtggacagctgctgtgtgcag
acagcagcacaggaaaaggaagacagaggagagggagtagaggatggtcccttccacgac
acgtgggtattacaggagctacaatatgagatttgggtggggacacagccaaaccttatc
agtgtagacttaaaatattag

>gi568815597r:241397831_241619722|GENSCAN_predicted_peptide_6|302_aa
MFSQRDQQTSKKTPNEKQKVGSLQACFLAKRNFQIDVYEAREDTRVATFTRGRSINLALS
HRGRQALKAVGLEDQIVSQGIPMRARMIHSLSGKKSAIPYGTKSQTYFSFGCFVLFFRSD
KVPKDVTCDLIVGCDGAYSTVRSHLMKKPRFDYSQQYIPHGYMELTIPPKNGDNKSFTCT
LFMPFEEFEKLLTSNDVVDFFQKYFPDAIPLIGDSSGKDEPPMSRGFWASYAGSSGSLGL
GVPQELAELFSTGRYTNLWHSRYIRQPQILDPTLTRHGFEDCLVFDELMDKFSNDLIISV
KY

>gi568815597r:241397831_241619722|GENSCAN_predicted_CDS_6|909_bp
atgttcagtcaaagagatcaacaaaccagtaaaaaaactcctaatgagaaacaaaaggtt
ggctcattacaagcatgctttcttgcaaagaggaatttccagattgatgtatatgaagct
agggaagatactcgagtggctaccttcacacgtggaagaagcattaacttagccctttct
catagaggacgacaagccttgaaagctgttggcctggaagatcagattgtatcccaaggt
attcccatgagagcaagaatgatccactctctttcaggaaaaaagtctgcaattccctat
gggacaaagtctcagacatatttttcttttggatgttttgttctatttttcagatctgac
aaagttcccaaagatgtcacttgtgacctcattgtaggatgtgatggagcctattcaact
gtcagatctcacctgatgaagaaacctcgctttgattacagtcagcagtacattcctcat
gggtacatggagttgactattccacctaagaacggagataacaaatcattcacatgtact
ttgttcatgccctttgaagagtttgaaaaacttctaaccagtaatgatgtggtagatttc
ttccagaaatactttccggatgccatccctctaattggagattcctccgggaaagatgag
ccaccaatgtcccgaggcttttgggcatcttatgcaggctcctcaggctccttggggctt
ggcgtgccacaggaactggctgaacttttttctactggtagatacacaaatctttggcac
agcagatacatccggcagcctcagatcttggatcctacacttactagacacggctttgaa
gactgcttggtatttgatgagttaatggataaattcagtaacgaccttattatctctgtc
aaatactga

>gi568815597r:241397831_241619722|GENSCAN_predicted_peptide_7|385_aa
XTQNDGGVALLKTMEVSTDQKWAGCGIHQRQERGPPLCAAPLGWISQLQAATREARASMG
PVQQGTICMQVTEKYTNSIIKADLLQNSGTREDHASPEDPLTPVSNPWIVSIATLTVLAY
ERYIRVVHARVINFSWAWRAITYIWLYSLAWAGAPLLGWNRYILDVHGLGCTVDWKSKDA
NDSSFVLFLFLGCLVVPLGVIAHCYGHILYSIRMLRCVEDLQTIQVIKILKYEKKLAKMC
FLMIFTFLVCWMPYIVICFLVVNGHGHLVTPTISIVSYLFAKSNTVYNPVIYVFMIRKFR
RSLLQLLCLRLLRCQRPAKDLPAAGSEMQIRPIVMSQKDGDRPKKKVTFNSSSIIFIITS
DESLSVDDSDKTNGSKVDVIQVRPL

>gi568815597r:241397831_241619722|GENSCAN_predicted_CDS_7|1158_bp
nagacacagaacgatggcggtgttgctctgctgaaaacgatggaggtcagcacggaccag
aaatgggctggctgcggaatccatcagagacaggagagagggccacccctctgcgctgca
cctcttggttggatcagccagcttcaggcagccactagggaagccagagcctccatgggt
ccagtgcagcaaggcactatctgcatgcaggtgacagagaaatatacaaacagtatcatt
aaagcggacttgttgcaaaatagcggtacacgtgaagaccatgcaagcccagaagacccc
ctgacccctgtcagcaatccttggattgtttccattgccaccctaaccgtgctggcctat
gaacgttacattcgcgtggtccatgccagagtgatcaatttttcctgggcctggagggcc
attacctacatctggctctactcactggcgtgggcaggagcacctctcctgggatggaac
aggtacatcctggacgtacacggactaggctgcactgtggactggaaatccaaggatgcc
aacgattcctcctttgtgcttttcttatttcttggctgcctggtggtgcccctgggtgtc
atagcccattgctatggccatattctatattccattcgaatgcttcgttgtgtggaagat
cttcagacaattcaagtgatcaagattttaaaatatgaaaagaaactggccaaaatgtgc
tttttaatgatattcaccttcctggtctgttggatgccttatatcgtgatctgcttcttg
gtggttaatggtcatggtcacctggtcactccaacaatatctattgtttcgtacctcttt
gctaaatcgaacactgtatacaatccagtgatttatgtcttcatgatcagaaagtttcga
agatcccttttgcagcttctgtgcctccgactgctgaggtgccagaggcctgctaaagac
ctaccagcagctggaagtgaaatgcagatcagacccattgtgatgtcacagaaagatggg
gacaggccaaagaaaaaagtgactttcaactcttcttccatcatttttatcatcaccagt
gatgaatcactgtcagttgacgacagcgacaaaaccaatgggtccaaagttgatgtaatc
caagttcgtcctttgtag