GENSCAN 1.0	Date run:  6-Nov-116	Time: 21:21:39

Sequence gi568815586r:27863347_28069494 : 206148 bp : 39.48% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   2182   2325  144  0  0   80   22   111 0.228   3.87
 1.02 Term +   3118   3255  138  0  0   71   39    92 0.631  -0.42
 1.03 PlyA +   3744   3749    6                               1.05

 2.03 PlyA -   3924   3919    6                               1.05
 2.02 Term -  11120  11026   95  0  2   75   49    90 0.829   0.81
 2.01 Init -  11326  11206  121  1  1   68   74    95 0.900   6.50
 2.00 Prom -  29713  29674   40                              -4.15

 3.04 PlyA -  29782  29777    6                               1.05
 3.03 Term -  37839  37700  140  1  2  107   42    58 0.370   0.24
 3.02 Intr -  40427  40376   52  2  1  102  103    11 0.395   1.56
 3.01 Init -  41631  41566   66  0  0   66   82    66 0.457   4.92
 3.00 Prom -  45398  45359   40                              -4.15

 4.00 Prom +  47055  47094   40                              -7.95
 4.01 Init +  49890  50040  151  2  1   55   53   169 0.858  10.35
 4.02 Intr +  52521  52560   40  1  1   46  103    13 0.421  -5.04
 4.03 Intr +  57537  57725  189  0  0   79  103   102 0.903   8.58
 4.04 Intr +  60334  60508  175  1  1   36   50   169 0.181   6.92
 4.05 Intr +  92656  92703   48  0  0  131   63    10 0.078   0.76
 4.06 Term +  96195  96314  120  2  0   55   42    96 0.050  -0.81
 4.07 PlyA +  96504  96509    6                               1.05

 5.12 PlyA -  98110  98105    6                               1.05
 5.11 Term - 100424  99998  427  1  1   47   42   436 0.979  28.69
 5.10 Intr - 100696 100644   53  1  2   76   75    38 0.917  -1.91
 5.09 Intr - 106170 106048  123  0  0  132   95    82 0.994  13.16
 5.08 Intr - 106959 106679  281  1  2   92   59   231 0.597  16.87
 5.07 Intr - 107906 107793  114  0  0   73   91    30 0.271   1.30
 5.06 Intr - 108673 108471  203  0  2  129   17     3 0.038  -4.69
 5.05 Intr - 113184 113021  164  0  2   63   41   107 0.059   1.35
 5.04 Intr - 116554 116469   86  2  2   56   95   100 0.085   6.12
 5.03 Intr - 135651 135500  152  2  2   90   56    32 0.057  -0.91
 5.02 Intr - 141705 140331 1375  1  1   65   53   388 0.666  19.95
 5.01 Init - 142432 141856  577  1  1   70   40   276 0.970  16.34
 5.00 Prom - 143383 143344   40                              -6.15

 6.02 PlyA - 143553 143548    6                               1.05
 6.01 Sngl - 144437 143781  657  2  0   65   43   390 0.910  28.12
 6.00 Prom - 149809 149770   40                              -7.65

 7.00 Prom + 151899 151938   40                              -5.35
 7.01 Init + 162675 162824  150  2  0   57    6   191 0.731   7.89
 7.02 Intr + 164619 164747  129  2  0   70   47    71 0.164   1.17
 7.03 Intr + 171038 171128   91  1  1   74   98    58 0.197   4.05
 7.04 Intr + 183344 183544  201  0  0   65   31   102 0.141   0.54
 7.05 Intr + 201507 201642  136  1  1   22   95    69 0.018  -0.29
 7.06 Intr + 203974 204127  154  1  1   25   98    90 0.017   2.85

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:27863347_28069494|GENSCAN_predicted_peptide_1|93_aa
MGRKIQIREIFSRYNHQKLMTDWVWLAELGGFAIPPFSVVGIVELEWCFVRFDGTTGRSG
VARGHRPWGSILPVGRCGKTECQAGQTLVSNAM

>gi568815586r:27863347_28069494|GENSCAN_predicted_CDS_1|282_bp
atggggagaaaaatacagatacgagaaatatttagcagatataatcaccagaagttgatg
actgattgggtgtggcttgcagagttgggtggttttgcaataccaccattttctgtggtt
ggtattgtggaattggaatggtgttttgtaagatttgatggaaccacaggccgaagtggt
gtggccagaggccatcggccttggggaagcatcttgccagtggggagatgtgggaagacg
gagtgccaagctggccagacgctggtgtctaatgctatgtaa

>gi568815586r:27863347_28069494|GENSCAN_predicted_peptide_2|71_aa
MTLNEHAAFKHLFNKAHLAPPLIHLTLSGHSTCFREHRVGDTSTIRFLKLFPTFPPLLFH
KTAIVILARSQ

>gi568815586r:27863347_28069494|GENSCAN_predicted_CDS_2|216_bp
atgactcttaacgagcatgctgccttcaagcatctgtttaacaaagcacatcttgcaccg
cccttaatccatttaaccctgagtggacacagcacatgtttcagagagcaccgggttggg
gacacgtcaaccatccgatttctcaaacttttccccacctttcccccgcttctattccac
aaaaccgccattgtcatcctggcccgttctcaatga

>gi568815586r:27863347_28069494|GENSCAN_predicted_peptide_3|85_aa
MEREESLVFETLSEPPIDGVENPSIPMNKPLSQVYQGRTVSSGCILLANTVEDQRIQKLF
LIVYVVQPLGLQTSVKKGGRAYRRY

>gi568815586r:27863347_28069494|GENSCAN_predicted_CDS_3|258_bp
atggaaagagaagaaagcctggtgtttgagacactctctgagccccccatagatggagtg
gagaatccatccatacctatgaacaagccactttctcaggtgtatcaaggtagaacagtc
tcctccgggtgcattttattagccaacacagttgaagaccagagaatacaaaagctcttc
ctcatagtctatgtagttcagcctcttgggcttcagaccagtgtgaagaagggtggaaga
gcatatagaagatattag

>gi568815586r:27863347_28069494|GENSCAN_predicted_peptide_4|240_aa
MSPQWSAKLGYGPLTTHQAVTECGLPQGKAHDLEGKGSEAEDCQPVAQPAMLSSPSLLTK
LPGRSPLIQWSWPLRDQRRSVTGLDGALLVDESTFITVGEGNSHLLLDGRSQTTSTIKHL
EYMHSARHLEDDYLASERSSAITYSKAVQKVYSQGRWKAKRKTVAMQPMPCALASNSPGL
GVLGPGQVTCEAKLKDGIHLKETTTEWNLIGYVIELTVRVVAEFYMADIYGCKTYKAAYS

>gi568815586r:27863347_28069494|GENSCAN_predicted_CDS_4|723_bp
atgtctcctcagtggagtgccaagttagggtatggacctttaaccacgcatcaagcagtc
actgaatgtgggctgccccagggaaaggcacatgaccttgagggaaaaggctcagaagct
gaggactgtcagccagtagcacagccagccatgctttcttcaccctctctcctaacaaag
cttcctggcaggagtccccttatccagtggagctggcccctcagggaccagagaaggtct
gtcacagggttggatggggcattattagtggatgaatcaaccttcatcacagtgggtgag
ggtaacagccacctcctccttgatggtcggagccagacaacctccaccataaagcatctt
gaatatatgcattcggctcggcatttagaagatgactatttggcttctgaacgttcttct
gctattacatattccaaagctgtacagaaagtgtattcacaaggaagatggaaagccaag
aggaaaacagttgcaatgcagcctatgccctgtgctctagcctcaaactcaccaggactt
ggtgttctaggacctggacaggttacttgtgaagcaaaacttaaagatggtatacactta
aaggaaacaactacagaatggaatttgattggctatgtcattgaattaacagtcagagtt
gtggcagagttttacatggcagacatatatgggtgtaagacctacaaagcagcatattct
taa

>gi568815586r:27863347_28069494|GENSCAN_predicted_peptide_5|1184_aa
MDKFLDTYTLPRLNQEEVESLNRPVTGAEIVAIINSLPTKKSPGPDGFTAEFYQRYKEEL
VPFLLKLFQSIENEGILPNSFYEASIILIPKPGRDTTKKENFRPISLMNIDAKILNKVLA
NRIQQHIKKFIHHDQVGFIPGMQGWFNIHKSINVIQHINRTKDKNHMIISTDAEKAFDKI
QQPFMLETLNKLVLEVLARAIRQEKEIKGIQLGKKEVKLSLFADDMIIYLENPTVSTQNL
LKLISNFSKVSGYKINVQKSQAFLYTNNRQTESQTMTELPFTIASKRIKYLGVQLTRDVK
DLFKENYKPLLKEIKEDTNKWKNIPCSWVGRINIVKMAILPKVIYRFNAIAIKLPMTFFT
VLEKTTLKFIWNQKRACIAKSILSQKSKAGSITLPDFKLYYKATVTKTSWYWYQNRDIDQ
WDRTEPSEITLHIYNYLIFDKPDKNKQWGKDSLFNKWCWENWLAICRKLKLDPFLTPYTK
INSRWIKDLHVRPKTIKTLEENLGITIQDIGMGKDFMSKTPKAMATKAKIDKWDLIQLKS
FCTAKETTIRVNRQPTKWEKVFATYSSDKGLITRIYNELKQIYKKKTNNLIKNWAKDMNR
HFSKEDIYAAKKHMKKCSPSLAIREMQIKTAMRYHLTPVRMAIIKKSGNNRAYHAGFINL
IKSLPSGRHLQLLASRCLRVLVLQDPPPKEEKKKRTSRKSAVFEEIQEIVFNEQPVQLDF
FFEKSLNVNMEWRSDTLLRTMVINEVAPLNNMLQRASPLLEKKLSNFPEIPDNLLAAVSP
LNESRFPPSDLTITLGLLHLFGRILFINQKVFEVQRLTFLSADTLSFHTIQTSLTFRNPY
TFKGSCGNSQRESRAAHNHSSTASVRWLQRLGYSLPRICNLGLLRGRGQAGRHLFATSSL
LRQVCLGACEHSSARFSTRLQPAPPGQHVSPPVKRGCRLPAAPAATNDPPSPPPGPPDRR
HTHLKLVLRVCGINFPEATSPPEEVPSASGDDAAETGSAVERRGVPAELRGALLRALGGG
SQPPPLKPMRPKNVHVPTKVTTYKRAVSEHQLLHDKGKSIQDLRRRFFLHHLIAEIHTAE
IRATSEVSPNSKPSPNTKNHPVRFGSDDEGRYLTQETNKVETYKEQPLKTPGKKKKGKPG
KRKEQEKKKRRTRSAWLDSGVTGSGLEGDHLSDTSTTSLELDSR

>gi568815586r:27863347_28069494|GENSCAN_predicted_CDS_5|3555_bp
atggataaattcctcgacacatatactctcccaagactaaaccaggaagaagttgaatct
ctgaatagaccagtaacaggagctgaaattgtggcaataatcaatagcttaccaaccaaa
aagagtccaggaccggatggattcacagccgaattctaccagaggtacaaggaggaactg
gtaccattccttctgaaactattccaatcaatagaaaacgagggaatcctccctaactca
ttttatgaggccagcatcatcctgataccaaagccaggcagagacacaacaaaaaaagag
aattttagaccaatatccttgatgaacattgatgcaaaaatcctcaataaagtactggca
aaccgaatccagcagcacatcaaaaagtttatccaccatgatcaagtgggcttcatccct
gggatgcaaggctggttcaatatacacaaatcaataaatgtaatccagcatataaacaga
accaaagacaaaaaccacatgattatctcaacagatgcagaaaaggcctttgacaaaatt
caacaacccttcatgctagaaactctcaataaattagtgttggaagttctggccagggca
atcaggcaggagaaggaaataaagggtattcaattaggaaaaaaggaagtcaaattgtcc
ctgtttgcagacgacatgattatatatctagaaaaccccactgtctcaacccaaaatctc
cttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtacaaaaatca
caagcattcttatacaccaacaacagacaaacagagagccaaaccatgactgaactccca
ttcacaattgcttcaaagagaataaaatacctaggagtccaacttacaagggatgtgaag
gacctcttcaaggagaactacaaaccactgctcaaggaaataaaagaggatacaaacaaa
tggaagaacattccatgctcatgggtaggaagaatcaatatcgtgaaaatggccatactg
cccaaggtaatttacagattcaatgccatcgccatcaagctaccaatgactttcttcaca
gtattggaaaaaactactttaaagttcatatggaaccaaaaaagagcctgcatcgccaag
tcaatcctaagccaaaagagcaaagctggaagcatcacactacctgacttcaaactatac
tacaaggctacagtaaccaaaacatcatggtactggtaccaaaacagagatatagatcaa
tgggacagaacagagccctcagaaataacgctgcatatctacaactatctgatctttgac
aaacctgacaaaaacaagcaatggggaaaggattccctatttaataaatggtgctgggaa
aactggctagccatatgtagaaagctgaaactggatcccttccttacaccttatacaaaa
attaattcaagatggattaaagacttacacgttagacctaaaaccataaaaaccctagaa
gaaaacctaggcattaccattcaggacataggcatgggcaaggacttcatgtctaaaaca
ccaaaagcaatggccacaaaagccaaaattgacaaatgggatctaattcaactaaagagc
ttctgcacagcgaaagaaactaccatcagagtgaacaggcaacctacaaaatgggagaaa
gtttttgcaacctactcatctgacaaagggctaataaccagaatctacaatgaactcaaa
caaatttacaagaaaaaaacaaacaacctcatcaaaaactgggcaaaggacatgaacaga
cacttctcaaaagaagacatttatgcagccaaaaaacacatgaaaaaatgctcaccatca
ctggccatcagagaaatgcaaatcaaaaccgcaatgagatatcatctcacaccagttaga
atggcaatcattaaaaagtcaggaaacaacagggcataccatgctggtttcataaacctg
atcaaatctttgccttcaggcagacatctgcagttgttggcctccaggtgcttgagagtc
ctggtacttcaagaccctccccctaaggaagagaaaaaaaaaagaacctccaggaaatct
gcagtgtttgaagaaattcaagagattgtgttcaatgagcagccagtacaactcgatttc
ttttttgagaaaagtcttaatgttaacatggagtggcgatcagacacactgctcaggaca
atggtgattaatgaagtcgccccactgaacaatatgctacaaagggcttcaccactccta
gagaagaaactgtccaattttcctgagataccggacaatctcctggcagcagtttcccca
ctcaatgaaagcagatttcccccttcagatctaacgattacattagggctcctgcatctt
tttggaaggattctttttataaatcagaaagtgttcgaggttcaaaggttgacatttctg
agtgctgatactttgtcctttcatactatccaaacaagtctaacatttagaaatccttac
acattcaagggaagttgtggaaattcccagagagagagcagagcagcacataaccatagt
tccactgcatctgtccgctggctgcagcgactcggatacagtcttccaagaatctgtaac
ctgggacttttgagggggaggggacaagcagggcgccacctctttgcgactagctcactt
ctccggcaggtttgcctcggagcgtgtgaacattcctccgctcggttttcaactcgcctc
caacctgcgccgcccggccagcatgtctccccgcccgtgaagcggggctgccgcctccct
gccgctccggctgccactaacgacccgccctcgccgccacctggccctcctgatcgacga
cacacgcacttgaaacttgttctcagggtgtgtggaatcaactttccggaagcaaccagc
ccaccagaggaggtcccgagcgcgagcggagacgatgcagcggagactggttcagcagtg
gagcgtcgcggtgttcctgctgagctacgcggtgccctcctgcgggcgctcggtggaggg
tctcagccgccgcctttgaagcccatgaggcccaagaatgttcatgttcccaccaaggtc
acaacctacaaaagagctgtgtctgaacatcagctcctccatgacaaggggaagtccatc
caagatttacggcgacgattcttccttcaccatctgatcgcagaaatccacacagctgaa
atcagagctacctcggaggtgtcccctaactccaagccctctcccaacacaaagaaccac
cccgtccgatttgggtctgatgatgagggcagatacctaactcaggaaactaacaaggtg
gagacgtacaaagagcagccgctcaagacacctgggaagaaaaagaaaggcaagcccggg
aaacgcaaggagcaggaaaagaaaaaacggcgaactcgctctgcctggttagactctgga
gtgactgggagtgggctagaaggggaccacctgtctgacacctccacaacgtcgctggag
ctcgattcacggtaa

>gi568815586r:27863347_28069494|GENSCAN_predicted_peptide_6|218_aa
MEDEMNEMKREGKFREKRIKRNEQSLQETRDYVKRPNLSLIGVPESDGENGTKLENTLQD
IIQENFPNLARQANIQIQEIQRTPQRYSSRRATPRHIIVRFTKVEMKEKMLRAAREKGRV
TLKGKPIRLTADLSAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGEIKYFTDK
QMLRDFVTTRPALKELLKEALNMERNNQYQPLQNHAKM

>gi568815586r:27863347_28069494|GENSCAN_predicted_CDS_6|657_bp
atggaagatgaaatgaatgaaatgaagcgagaagggaagtttagagaaaaaagaataaaa
agaaatgagcaaagcctccaagaaacacgggactatgtgaaaagaccaaatctaagtctg
attggtgtacctgaaagtgacggggagaatggaaccaagttggaaaacactctgcaggat
attatccaggagaacttccccaatctagcaaggcaggccaacattcagattcaggaaata
cagagaacgccacaaagatactcctcgagaagagcaactccaagacacataattgtcaga
ttcaccaaagttgaaatgaaggaaaaaatgttaagggcagccagagagaaaggtcgggtt
accctcaaagggaagcccatcagactaacagcagatctctcagcagaaactctacaagcc
agaagagagtgggggccaatattcaacattcttaaagaaaagaattttcaacccagaatt
tcatatccagccaaactaagcttcataagtgaaggagaaataaaatattttacagacaag
caaatgctgagagattttgtcaccaccaggcctgccttaaaagagctcctgaaggaagcg
ctaaacatggaaaggaacaaccagtaccagccgctgcaaaatcatgccaaaatgtaa

>gi568815586r:27863347_28069494|GENSCAN_predicted_peptide_7|287_aa
MGRTLTGGDGEGNIPEHGERRKDMQEEAVNEDSEESSSPGTQCVAERALHIKELRFNRRS
DQLGWADQNSDYAGSKVHAPNHHIPRSSEEDEQVGPGSESRKSGFRGYTANDHVILPVMD
DFNTLFTIAKTWNQLKCPLMTNWIKKMWYIYTMEYYAAMKKNEIMSFAGTWMELGAIILR
ELTKKQKTKYRAQTRLQCSRKQATQESDTEKLIQMWTLLKRALLFGNPGLDLNSNSFCSV
RDELEVNIQHLYRSETLCWRLAPVSSCEKYWECQQGWTTWGQLEPRK

>gi568815586r:27863347_28069494|GENSCAN_predicted_CDS_7|861_bp
atggggaggactctgacaggtggtgatggtgaggggaacattccagagcatggagaaagg
cgcaaagatatgcaggaagaagctgtgaatgaagacagcgaggagtccagttcacctgga
acgcagtgtgtggcagaaagagcactgcatataaaggaattgagatttaatagaaggtca
gaccagctcggatgggcagaccagaattcagattatgctggatctaaagtgcatgctcct
aaccaccacattccaaggtccagtgaggaggatgagcaggtaggaccaggctctgaatcc
aggaagtcaggcttcagagggtacactgctaatgatcatgttatattgcctgtcatggat
gacttcaacacactattcacaattgcaaagacatggaatcaacttaaatgcccattaatg
acaaactggataaagaaaatgtggtacatctacaccatggaatactatgcagccatgaaa
aagaatgagattatgtcctttgcaggaacatggatggagctgggagccattatcctaagg
gaactaacgaagaaacagaaaaccaaataccgagctcagaccagacttcagtgttcaaga
aagcaggctactcaagagagtgatacagaaaagctgattcaaatgtggactttgctgaaa
agggcattactatttggtaacccaggtcttgatcttaattcaaacagcttctgcagtgtg
agggatgaattggaggtgaacattcagcatctgtaccgttctgagaccctttgctggaga
cttgctcctgtctcatcatgtgagaaatattgggagtgccagcagggctggaccacctgg
ggtcagttggagccacggaag