GENSCAN 1.0	Date run:  3-Nov-116	Time: 15:58:59

Sequence gi568815581f:32071043_32324730 : 253688 bp : 45.69% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 Intr -   6239   6145   95  1  2   24   74   102 0.051   2.01
 1.05 Intr -   9001   8824  178  2  1   41   22   151 0.120   2.78
 1.04 Intr -  15924  15889   36  1  0   34  111    53 0.010   0.43
 1.03 Intr -  35820  35659  162  1  0   36   94   104 0.605   5.75
 1.02 Intr -  36420  36280  141  1  0  101   34   143 0.348  10.52
 1.01 Init -  36919  36892   28  1  1   30   99    -2 0.603  -5.03
 1.00 Prom -  37313  37274   40                              -5.96

 2.12 PlyA -  37416  37411    6                               1.05
 2.11 Term -  40962  40516  447  0  0   29   41   343 0.828  18.92
 2.10 Intr -  43080  42945  136  2  1  115   12   109 0.203   6.57
 2.09 Intr -  47100  46959  142  1  1   69   82    27 0.408  -0.39
 2.08 Intr -  47930  47865   66  0  0   87   30    93 0.249   2.28
 2.07 Intr -  56733  56549  185  2  2   73   14   121 0.070   2.63
 2.06 Intr -  65719  65677   43  2  1   94   99     5 0.016  -0.50
 2.05 Intr -  71521  71336  186  2  0   80  -15   241 0.066  12.66
 2.04 Intr -  79972  79822  151  1  1   89  -47   140 0.033   0.34
 2.03 Intr -  88987  88836  152  2  2   82   81    34 0.779   1.98
 2.02 Intr -  89410  89274  137  0  2   67   79    27 0.491  -0.09
 2.01 Init -  89738  89506  233  2  2   99   41   115 0.550   3.65
 2.00 Prom -  96265  96226   40                              -3.36

 3.00 Prom + 100503 100542   40                              -3.56
 3.01 Init + 102783 102870   88  2  1   24   95    46 0.751  -0.28
 3.02 Intr + 104277 104320   44  1  2   70   99    42 0.870   1.46
 3.03 Intr + 104920 104973   54  0  0   86  100    43 0.956   4.48
 3.04 Intr + 107579 107694  116  1  2   79   78   113 0.994   8.65
 3.05 Intr + 111715 111823  109  1  1   81   69    44 0.991   2.09
 3.06 Intr + 112129 112230  102  0  0   54   77    94 0.972   5.27
 3.07 Intr + 121159 121257   99  0  0   51   95    65 0.894   3.81
 3.08 Intr + 132848 132931   84  1  0   68   91    63 0.893   4.62
 3.09 Intr + 137065 137267  203  0  2   76   94    92 0.212   6.68
 3.10 Intr + 151717 151860  144  1  0   31   92   118 0.038   5.90
 3.11 Term + 153574 153691  118  1  1   84   40    89 0.992   1.71
 3.12 PlyA + 154392 154397    6                               1.05

 4.00 Prom + 154773 154812   40                              -1.86
 4.01 Init + 187765 187889  125  0  2   63   53   238 0.953  15.47
 4.02 Intr + 188541 188577   37  0  1  108   86    30 0.985   3.06
 4.03 Intr + 191511 191721  211  2  1   82   65   111 0.181   6.69
 4.04 Intr + 195110 195258  149  0  2  -77   86   289 0.462  12.15
 4.05 Intr + 196860 196883   24  2  0   81   91    23 0.229   0.12
 4.06 Intr + 206732 206917  186  1  0   46   81    57 0.054   0.69
 4.07 Intr + 211113 211208   96  2  0   49   81    68 0.726   2.41
 4.08 Intr + 213617 213775  159  1  0  110   75   220 0.992  23.08
 4.09 Intr + 217750 217986  237  0  0  114   35   377 0.995  32.81
 4.10 Intr + 223252 223400  149  0  2  100   96    82 0.873   9.23
 4.11 Intr + 227050 227162  113  1  2   93   96   165 0.945  17.82
 4.12 Intr + 234299 234399  101  0  2   85   89    78 0.122   7.43
 4.13 Intr + 243859 243951   93  0  0   89   65    32 0.027   1.16
 4.14 Intr + 245190 245250   61  2  1  100   86    74 0.043   6.71
 4.15 Term + 249916 250187  272  2  2  141   55   422 0.999  39.85
 4.16 PlyA + 250866 250871    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 151748 151860  113  1  2   77   92    94 0.956   8.38
S.002 Term + 234299 234468  170  0  2   85   36   134 0.808   5.94
S.003 Init + 245202 245250   49  2  1   73   86   119 0.955   9.57


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581f:32071043_32324730|GENSCAN_predicted_peptide_1|214_aa
MAFIKKLNSEMIKAAEADSDCNFHHFLNQQCNQYHLSSTEGYGGPHKWLSYNWNQNATST
AAASATTIASTGQTFQITGNPVTMAGKVITKLPLPANSKTVTVNVPATQGGSWIREPKIL
SSARCEGQWLILKFLSYSLIRFLPKLWFQLTPLSEAASEFSCYGNGAAEIPRNLLVRLIA
SPSCFTFCHELKLPEIFPEAKQMPALCLYSPQNX

>gi568815581f:32071043_32324730|GENSCAN_predicted_CDS_1|642_bp
atggcctttatcaagaaattaaattcagaaatgattaaagcagcagaagctgacagtgat
tgcaacttccaccacttcctcaaccaacagtgcaaccagtaccatctctccagcacagaa
ggttatggtggcccccataagtggctcagttacaactggaaccaaaatgccaccagcaca
gctgcggcatctgctacaaccattgccagcacaggtcagacgttccaaattacaggcaat
ccagtcactatggcaggaaaagtaattaccaaactgccacttcctgcaaacagcaagact
gtcactgtaaatgtgccagcaacacaaggaggttcttggattcgagagcctaagatcctg
agttcagctcggtgtgagggccagtggttgatcttgaagtttctttcctactccctcatc
cgtttcctgcccaagctgtggttccagctgactcccctatcagaggctgcgagtgagttc
agttgttatggcaacggggctgcggagatccccaggaacctgctggtccgcctcattgcc
tcaccttcctgcttcaccttctgccatgagttaaagctccctgagatctttccagaagcc
aagcagatgccagcactgtgcttgtacagcccgcagaactnn

>gi568815581f:32071043_32324730|GENSCAN_predicted_peptide_2|625_aa
MGSDLCAQPGTPAAAVGWAAPDASLGTISLRGCNWTRRITSSFHSWHWRTQWCPEAWRLQ
EPQGPKEGVTALAKGAPSSFSPTIQQVPSSCPASRKNEVTDKWRLSKTNRSFTERHNSSE
ETYKSGRLFMGLRGEEECADWSMGSHGRTRVTSSHTGLRDQQPSPRASGPPSLKVWFRNR
RFKLKQQQQQQQQSAKQPNQIPSIQEECAHLPQNIPQCLCFFSRVASPQESRDSASSASS
GPAGCGGGGGGGGGGGGGGGGGDDGTRRGTRAFGTRTRSAPEQRSRCPLWWSGKVQCFDT
RVEREQASGKHLPSAKPSRCLIEEVHLPVFLLISLNLSLAKAHVGSGTGVMRRTRKGSRA
SGDAPSWDGPTFMDLNVFAGNMGLAAIINDLAAVIVVLLQKYGKSQATSSMPRDLFPSTL
KACSIPQQRRDRVEKEKAQAVEQQAKVSEQKKAEDVKAQMEALSKQQHLTSHQRGELGTR
IATASEKGTLIGIFDTSSGHLIQELRRGSQAANIYCINFNQDASLICVSSDHGTVHIFAA
EDLKRNKQSSLASASFLPKYFSYKWSFSKFQVPSGSPCICAFGTQPNAVIAICADCSYYK
LLFNPKGECIRDVYAQFLEMTDDKL

>gi568815581f:32071043_32324730|GENSCAN_predicted_CDS_2|1878_bp
atggggtctgacctctgtgcacagccaggcacgccggctgctgctgtggggtgggcagct
ccagatgccagcttgggcaccatctccctgcgaggctgcaactggaccaggcgcatcaca
agcagcttccacagctggcactggagaacacagtggtgcccggaagcttggcgactccag
gaaccacagggccccaaagagggagtcacagccctggctaagggagctcccagctctttt
agccccaccattcagcaggtcccgagttcttgtcctgcatccaggaagaatgaggtaaca
gacaagtggaggctgagcaagacaaacaggagctttactgagcgacacaacagctcagag
gaaacctacaagtccgggaggctttttatgggcctcagaggggaagaagagtgtgccgat
tggtccatgggcagccatgggaggacccgcgtcacaagttcccacactggtctgcgggat
cagcaacccagcccccgggcttcaggccctcccagcctgaaggtttggtttaggaaccgg
cgattcaaattgaagcagcagcagcagcagcagcagcaatcagcaaagcaaccaaaccag
ataccttccatccaagaagaatgtgcccacctcccccagaacatcccccagtgcttatgc
tttttctcccgtgttgcttccccgcaagagagccgggacagcgccagctccgcctcctcc
ggcccagcgggctgtggcggcggcggcggcggcggcggcggcggcggcggcggcggcggc
ggcggggacgacggcacgcggcgagggacacgcgctttcggaacgcgaacgcgctctgcg
ccggaacagcgctcccgctgcccactctggtggagtggaaaagtccaatgctttgatacc
agggtggagcgtgaacaggcttccgggaaacatcttccatcagccaaaccgtcccgctgc
cttattgaagaagtccatcttccagtttttctgctcatatctctgaatctctccttggca
aaggctcacgtgggctccggcacgggcgtcatgcggaggacaaggaaggggagccgcgcg
tctggggatgccccctcatgggatggacctactttcatggacctcaacgtctttgcaggg
aacatgggcctagcggccatcataaatgacctggctgcagtgatagttgtgctgttacag
aaatatggaaaatcccaggccacgtcctccatgcctcgggacctgtttccttccacacta
aaggcttgctcaataccccagcaaaggagggatagagtggagaaagaaaaggcacaagca
gttgagcaacaggccaaggttagtgaacagaagaaggcagaggatgtcaaggcccaaatg
gaggctctttcaaaacagcagcacttgacttcccatcagcggggggagttgggaacaaga
attgcaactgcatccgagaaagggacccttataggaatatttgatacttcctcagggcat
ttaattcaggaactgcgaagaggatctcaagcagccaatatttactgcattaacttcaat
caggatgcgtccctcatctgtgtatccagcgaccatggcacagtgcatatttttgcagct
gaagatctaaaaaggaataaacagtccagtttggcctcagccagtttccttccaaaatac
ttcagttacaagtggagtttctccaagtttcaggttccctcaggctctccgtgcatttgt
gcctttggaacacagccaaacgccgtcattgcaatttgtgcagactgcagctactacaaa
ctcctgttcaaccccaagggggagtgcatccgagatgtctacgcgcagtttctagagatg
actgatgacaagttgtga

>gi568815581f:32071043_32324730|GENSCAN_predicted_peptide_3|386_aa
MKVPPRAEEITIPADVTPERVPTHIVDYSEAEQSDEQLHQEISQANVICIVYAVNNKHSI
DKEVRSISARLPIVWDVRSASARLPRMGCEERLCPAALSGRLPLILVGNKSDLVEYSSME
TILPIMNQYTEIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPEEKEMKPACIKAL
TRIFKISDQDNDGTLNDAELNFFQRQKKIREDHKSYYAINTVYVYGQEKYLLQHFMDSRI
PCLIVAAKSDLHEVKQEYSISPTDFCRKHKMPPPQAFTCNTADAPSKDIFVKLTTMAMYP
LRARIAEWGAMLLADDEGSITHQVHAVSSVEDSIFMESSHGPLFLEARHVTQADLKSSTF
WLRASFGATVFAVLGFAMYKALLKQR

>gi568815581f:32071043_32324730|GENSCAN_predicted_CDS_3|1161_bp
atgaaggttcctccccgggcagaagaaatcaccattccagctgatgtcaccccagagaga
gttccaacacacattgtagattactcagaagcagaacagagtgatgaacaacttcatcaa
gaaatatctcaggctaatgtcatctgtatagtgtatgccgttaacaacaagcattctatt
gataaggaagtgaggagcatctctgcccggctgcccatcgtctgggatgtgaggagcgcc
tctgcccggctgccccgaatgggatgtgaggagcgcctctgcccagccgccctgtctggg
aggctgcctttaatattggttgggaacaaatctgatctggtggaatatagtagtatggag
accatccttcctattatgaaccagtatacagaaatagaaacctgtgtggagtgttcagcg
aaaaacctgaagaacatatcagagctcttttattacgcacagaaagctgttcttcatcct
acagggcccctgtactgcccagaggagaaggagatgaaaccagcttgtataaaagccctt
actcgtatatttaaaatatctgatcaagataatgatggtactctcaatgatgctgaactc
aacttctttcagaggcagaagaaaattcgtgaagatcataaatcctactatgcgattaac
actgtttatgtatatggacaagagaaatacttgttgcaacactttatggacagcagaata
ccttgcttaatcgtagctgcaaagtcagacctgcatgaagttaaacaagaatacagtatt
tcacctactgatttctgcaggaaacacaaaatgcctccaccacaagccttcacttgcaat
actgctgatgcccccagtaaggatatctttgttaaattgacaacaatggccatgtatccg
ttaagagcccggatagctgagtggggtgccatgctgttagcagacgatgagggcagtatt
actcaccaggtgcatgctgtcagctctgtagaagattccatcttcatggagtcatctcat
ggtccactttttcttgaagccaggcacgtgacacaagctgacctcaagagctccacgttt
tggcttcgagcaagttttggtgctactgtttttgcagttttgggctttgctatgtacaaa
gcattattgaaacagcgatga

>gi568815581f:32071043_32324730|GENSCAN_predicted_peptide_4|670_aa
MELQDVLLLLLLMLMLLLRPHHQKACLVDPTSFFAAAPHWSSLLDTLVPGSVQWPFILLC
VDFKCLVRNLKRGHGVAHLQNEEQGRSANRPSSVSLLISAKGSPREGPLHGTPPGIDECL
PAAAAPQPPPPPDPVSAMGEHPSPGPAVAACAEAERIEELEPEAEERLPAAPEDHWKVLF
DQSVPSSVTVKKYYDQRSNKFEECWAEQNQTGFSSLKPCRVLDMVRYDPPRGFSTCRTTE
PLFQIFTEQQVGEFPEILGVVNQTDVIHETWHFGLKFDPGNTGYISTGKFRSLLESHSSK
LDPHKREVLLALADSHADGQIGYQDFVSLMSNKRSNSFRQAILQGNRRLSSKALLEEKGL
SLSQRLIRHVAYETLPREIDRKWYYDSYTCCPPPWFMITVTLLEARTRVAFFLYNGVSLG
QFVLQVTHPRYLKNSLVYHPQLRAQVWRYLTYIFMHAGIEHLGLNVVLQLLVGVPLEMVH
GATRIGLVYVAGVVAGSLAVSVADMTAPVVGSSGGVYALVSAHLANIVMHGTCRQAKTGF
PPKAGPQVAHTSLSVKKGLLNWSGMKCQFKLLRMAVALICMSMEFGRAVWLRFHPSAYPP
CPHPSFVAHLGGVAVGITLGVVVLRNYEQRLQDQSLWWIFVAMYTVFVLFAVFWNIFAYT
LLDLKLPPPP

>gi568815581f:32071043_32324730|GENSCAN_predicted_CDS_4|2013_bp
atggagctccaggatgtcttgctgctgctgctgctgatgctgatgctgctgctgcggcct
caccatcaaaaagcctgcctcgtggaccccacgtcattcttcgctgcagcccctcactgg
agcagtctgttggacactctggtgcctggttctgtgcagtggcccttcatcctgctctgc
gttgacttcaagtgtcttgttaggaaccttaaaagaggccatggtgtagcgcacttgcaa
aatgaagagcaaggaagaagtgccaataggcccagttccgtgtcacttctcattagcgcc
aaaggttctcccagggaggggcctctgcatggcacacctccaggcatcgacgagtgcctg
cctgctgcagctgccccgcagccgccgccgcccccggaccccgtctcggccatgggcgag
caccccagcccgggccccgcggtggccgcctgcgccgaggcggagcgcatcgaggagctg
gaacccgaggccgaggagcggctgcccgcggcgccggaggaccactggaaagtcctgttt
gatcagagtgttccatcaagtgttactgtgaaaaaatactacgaccaaaggtcaaataag
tttgaagaatgctgggctgaacaaaatcagacaggtttctccagcctaaaaccttgcaga
gtccttgatatggtgcgttatgaccctccaagaggtttttccacttgtaggaccacagaa
cccttatttcagatctttactgagcaacaagtaggtgagtttcctgaaatacttggtgtt
gtgaaccaaacagatgtcatccatgaaacctggcattttggcttgaagtttgaccctggg
aacacaggctacattagcacaggcaagttccggagtcttctggagagccacagctccaag
ctggacccgcacaaaagggaggtcctcctggctcttgccgacagccacgcggatgggcag
atcggctaccaggattttgtcagcctaatgagcaacaagcgttccaacagcttccgccaa
gccatcctgcagggcaaccgcaggctaagcagcaaggccctgctggaggagaaggggctg
agcctctcgcagcgacttatccgccatgtggcctatgagaccctgccccgggaaattgac
cgcaagtggtactatgacagctacacctgctgccccccaccctggttcatgatcacagtc
acgctgctggaggcaaggacaagggttgcctttttcctctacaatggggtgtcactaggt
caatttgtactgcaggtaactcatccacgttacttgaagaactccctggtttaccaccca
cagctgcgagcacaggtttggcgctacctgacatacatcttcatgcatgcagggatagaa
cacctgggactcaatgtggtgctgcagctgctggtgggggtgcccctggagatggtgcat
ggagccacccgaattgggcttgtctacgtggccggtgttgtggcagggtccttggcagtg
tctgtggctgacatgaccgctccagtcgtgggctcttctggaggggtgtatgctctcgtc
tctgcccatctggccaacattgtcatgcatggaacatgtcggcaagcgaagacaggcttt
ccacctaaagcgggaccgcaggtggcccacacttcactttctgtgaagaaggggttgctg
aactggtcaggcatgaagtgccagttcaagctgctgcggatggctgtggcccttatctgt
atgagcatggagtttgggcgggccgtgtggctccgcttccacccgtcggcctatcccccg
tgccctcacccaagctttgtggcgcacttgggtggcgtggccgtgggcatcaccctgggc
gtggtggtcctgaggaactacgagcagaggctccaggaccagtcactgtggtggattttt
gtggccatgtacaccgtcttcgtgctgttcgctgtcttctggaacatctttgcctacacc
ctgctggacttaaagctgccgcctcccccctga