Result of FASTA (omim) for pF1KE0314
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0314, 716 aa
  1>>>pF1KE0314 716 - 716 aa - 716 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 9.0436+/-0.000412; mu= 3.5929+/- 0.026
 mean_var=217.1359+/-43.784, 0's: 0 Z-trim(118.1): 22  B-trim: 78 in 1/52
 Lambda= 0.087038
 statistics sampled from 30750 (30772) to 30750 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.7), E-opt: 0.2 (0.361), width:  16
 Scan time: 13.470

The best scores are:                                      opt bits E(85289)
NP_001188472 (OMIM: 606068,613596) protein FAM161A ( 716) 4686 601.8 3.1e-171
NP_115556 (OMIM: 606068,613596) protein FAM161A is ( 660) 3553 459.5 1.9e-128
XP_016860562 (OMIM: 606068,613596) PREDICTED: prot ( 526) 3494 452.0 2.8e-126
XP_016860561 (OMIM: 606068,613596) PREDICTED: prot ( 551) 2865 373.0 1.7e-102
XP_016860563 (OMIM: 606068,613596) PREDICTED: prot ( 470) 2361 309.7 1.7e-83


>>NP_001188472 (OMIM: 606068,613596) protein FAM161A iso  (716 aa)
 initn: 4686 init1: 4686 opt: 4686  Z-score: 3195.2  bits: 601.8 E(85289): 3.1e-171
Smith-Waterman score: 4686; 99.7% identity (99.9% similar) in 716 aa overlap (1-716:1-716)

               10        20        30        40        50        60
pF1KE0 MATSHRVAKLVASSLQTPVNPITGARVAQYEREDPLKALAAAEAILEDEEEEKVAQPAGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MATSHRVAKLVASSLQTPVNPITGARVAQYEREDPLKALAAAEAILEDEEEEKVAQPAGA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 SADLNTSFSGVDEHAPISYEDFVNFPDIHHSNEEYFKKVEELKAAHMETMAKLEKMYQDK
       ::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::
NP_001 SADLNTSFSGVDEHAPISYEDFVNFPDIHHSNEEYFKKVEELKAAHIETMAKLEKMYQDK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 LHLKEVQPVVIREDSLSDSSRSVSGKNSYHPVSLMTSFSEPDLGQSSSLYVSSSEEELPN
       :::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::
NP_001 LHLKEVQPVVIREDSLSDSSRSVSEKNSYHPVSLMTSFSEPDLGQSSSLYVSSSEEELPN
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE0 LEKEYPRKNRMMTYAKELINNMWTDFCVEDYIRCKDTGFHAAEKRRKKRKEWVPTITVPE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LEKEYPRKNRMMTYAKELINNMWTDFCVEDYIRCKDTGFHAAEKRRKKRKEWVPTITVPE
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE0 PFQMMIREQKKKEESMKSKSDIEMVHKALKKQEEDPEYKKKFRANPVPASVFLPLYHDLV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PFQMMIREQKKKEESMKSKSDIEMVHKALKKQEEDPEYKKKFRANPVPASVFLPLYHDLV
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE0 KQKEERRRSLKEKSKEALLASQKPFKFIAREEQKRAAREKQLRDFLKYKKKTNRFKARPI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KQKEERRRSLKEKSKEALLASQKPFKFIAREEQKRAAREKQLRDFLKYKKKTNRFKARPI
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE0 PRSTYGSTTNDKLKEEELYRNLRTQLRAQEHLQNSSPLPCRSACGCRNPRCPEQAVKLKC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PRSTYGSTTNDKLKEEELYRNLRTQLRAQEHLQNSSPLPCRSACGCRNPRCPEQAVKLKC
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE0 KHKVRCPTPDFEDLPERYQKHLSEHKSPKLLTVCKPFDLHASPHASIKREKILADIEADE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KHKVRCPTPDFEDLPERYQKHLSEHKSPKLLTVCKPFDLHASPHASIKREKILADIEADE
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KE0 ENLKETRWPYLSPRRKSPVRCAGVNPVPCNCNPPVPTVSSRGREQAVRRSLEEKKMLEEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ENLKETRWPYLSPRRKSPVRCAGVNPVPCNCNPPVPTVSSRGREQAVRRSLEEKKMLEEE
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KE0 RNRILTKQKQRMKELQKLLTTRAKAYDSHQSLAQISKSRVKCLRKSEKERMREYQRELEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RNRILTKQKQRMKELQKLLTTRAKAYDSHQSLAQISKSRVKCLRKSEKERMREYQRELEE
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KE0 REEKLKKRPLLFERVAQKNARMAAEKHYSNTLKALGISDEFVSKKGQSGKVLEYFNNQET
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 REEKLKKRPLLFERVAQKNARMAAEKHYSNTLKALGISDEFVSKKGQSGKVLEYFNNQET
              610       620       630       640       650       660

              670       680       690       700       710      
pF1KE0 KSVTEDKESFNEEEKIEERENGEENYFIDTNSQDSYKEKDEANEESEEEKSVEESH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KSVTEDKESFNEEEKIEERENGEENYFIDTNSQDSYKEKDEANEESEEEKSVEESH
              670       680       690       700       710      

>>NP_115556 (OMIM: 606068,613596) protein FAM161A isofor  (660 aa)
 initn: 3587 init1: 3528 opt: 3553  Z-score: 2426.8  bits: 459.5 E(85289): 1.9e-128
Smith-Waterman score: 4220; 91.9% identity (92.0% similar) in 716 aa overlap (1-716:1-660)

               10        20        30        40        50        60
pF1KE0 MATSHRVAKLVASSLQTPVNPITGARVAQYEREDPLKALAAAEAILEDEEEEKVAQPAGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 MATSHRVAKLVASSLQTPVNPITGARVAQYEREDPLKALAAAEAILEDEEEEKVAQPAGA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 SADLNTSFSGVDEHAPISYEDFVNFPDIHHSNEEYFKKVEELKAAHMETMAKLEKMYQDK
       ::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::
NP_115 SADLNTSFSGVDEHAPISYEDFVNFPDIHHSNEEYFKKVEELKAAHIETMAKLEKMYQDK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 LHLKEVQPVVIREDSLSDSSRSVSGKNSYHPVSLMTSFSEPDLGQSSSLYVSSSEEELPN
       :::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::
NP_115 LHLKEVQPVVIREDSLSDSSRSVSEKNSYHPVSLMTSFSEPDLGQSSSLYVSSSEEELPN
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE0 LEKEYPRKNRMMTYAKELINNMWTDFCVEDYIRCKDTGFHAAEKRRKKRKEWVPTITVPE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 LEKEYPRKNRMMTYAKELINNMWTDFCVEDYIRCKDTGFHAAEKRRKKRKEWVPTITVPE
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE0 PFQMMIREQKKKEESMKSKSDIEMVHKALKKQEEDPEYKKKFRANPVPASVFLPLYHDLV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 PFQMMIREQKKKEESMKSKSDIEMVHKALKKQEEDPEYKKKFRANPVPASVFLPLYHDLV
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE0 KQKEERRRSLKEKSKEALLASQKPFKFIAREEQKRAAREKQLRDFLKYKKKTNRFKARPI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 KQKEERRRSLKEKSKEALLASQKPFKFIAREEQKRAAREKQLRDFLKYKKKTNRFKARPI
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE0 PRSTYGSTTNDKLKEEELYRNLRTQLRAQEHLQNSSPLPCRSACGCRNPRCPEQAVKLKC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 PRSTYGSTTNDKLKEEELYRNLRTQLRAQEHLQNSSPLPCRSACGCRNPRCPEQAVKLKC
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE0 KHKVRCPTPDFEDLPERYQKHLSEHKSPKLLTVCKPFDLHASPHASIKREKILADIEADE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 KHKVRCPTPDFEDLPERYQKHLSEHKSPKLLTVCKPFDLHASPHASIKREKILADIEADE
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KE0 ENLKETRWPYLSPRRKSPVRCAGVNPVPCNCNPPVPTVSSRGREQAVRRSLEEKKMLEEE
       ::::::::::::::::::::::::::::::::::::::::::::::::            
NP_115 ENLKETRWPYLSPRRKSPVRCAGVNPVPCNCNPPVPTVSSRGREQAVR------------
              490       500       510       520                    

              550       560       570       580       590       600
pF1KE0 RNRILTKQKQRMKELQKLLTTRAKAYDSHQSLAQISKSRVKCLRKSEKERMREYQRELEE
                                                   ::::::::::::::::
NP_115 --------------------------------------------KSEKERMREYQRELEE
                                                  530       540    

              610       620       630       640       650       660
pF1KE0 REEKLKKRPLLFERVAQKNARMAAEKHYSNTLKALGISDEFVSKKGQSGKVLEYFNNQET
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 REEKLKKRPLLFERVAQKNARMAAEKHYSNTLKALGISDEFVSKKGQSGKVLEYFNNQET
          550       560       570       580       590       600    

              670       680       690       700       710      
pF1KE0 KSVTEDKESFNEEEKIEERENGEENYFIDTNSQDSYKEKDEANEESEEEKSVEESH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 KSVTEDKESFNEEEKIEERENGEENYFIDTNSQDSYKEKDEANEESEEEKSVEESH
          610       620       630       640       650       660

>>XP_016860562 (OMIM: 606068,613596) PREDICTED: protein   (526 aa)
 initn: 3494 init1: 3494 opt: 3494  Z-score: 2388.2  bits: 452.0 E(85289): 2.8e-126
Smith-Waterman score: 3494; 100.0% identity (100.0% similar) in 526 aa overlap (191-716:1-526)

              170       180       190       200       210       220
pF1KE0 PDLGQSSSLYVSSSEEELPNLEKEYPRKNRMMTYAKELINNMWTDFCVEDYIRCKDTGFH
                                     ::::::::::::::::::::::::::::::
XP_016                               MMTYAKELINNMWTDFCVEDYIRCKDTGFH
                                             10        20        30

              230       240       250       260       270       280
pF1KE0 AAEKRRKKRKEWVPTITVPEPFQMMIREQKKKEESMKSKSDIEMVHKALKKQEEDPEYKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AAEKRRKKRKEWVPTITVPEPFQMMIREQKKKEESMKSKSDIEMVHKALKKQEEDPEYKK
               40        50        60        70        80        90

              290       300       310       320       330       340
pF1KE0 KFRANPVPASVFLPLYHDLVKQKEERRRSLKEKSKEALLASQKPFKFIAREEQKRAAREK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KFRANPVPASVFLPLYHDLVKQKEERRRSLKEKSKEALLASQKPFKFIAREEQKRAAREK
              100       110       120       130       140       150

              350       360       370       380       390       400
pF1KE0 QLRDFLKYKKKTNRFKARPIPRSTYGSTTNDKLKEEELYRNLRTQLRAQEHLQNSSPLPC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QLRDFLKYKKKTNRFKARPIPRSTYGSTTNDKLKEEELYRNLRTQLRAQEHLQNSSPLPC
              160       170       180       190       200       210

              410       420       430       440       450       460
pF1KE0 RSACGCRNPRCPEQAVKLKCKHKVRCPTPDFEDLPERYQKHLSEHKSPKLLTVCKPFDLH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RSACGCRNPRCPEQAVKLKCKHKVRCPTPDFEDLPERYQKHLSEHKSPKLLTVCKPFDLH
              220       230       240       250       260       270

              470       480       490       500       510       520
pF1KE0 ASPHASIKREKILADIEADEENLKETRWPYLSPRRKSPVRCAGVNPVPCNCNPPVPTVSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ASPHASIKREKILADIEADEENLKETRWPYLSPRRKSPVRCAGVNPVPCNCNPPVPTVSS
              280       290       300       310       320       330

              530       540       550       560       570       580
pF1KE0 RGREQAVRRSLEEKKMLEEERNRILTKQKQRMKELQKLLTTRAKAYDSHQSLAQISKSRV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RGREQAVRRSLEEKKMLEEERNRILTKQKQRMKELQKLLTTRAKAYDSHQSLAQISKSRV
              340       350       360       370       380       390

              590       600       610       620       630       640
pF1KE0 KCLRKSEKERMREYQRELEEREEKLKKRPLLFERVAQKNARMAAEKHYSNTLKALGISDE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KCLRKSEKERMREYQRELEEREEKLKKRPLLFERVAQKNARMAAEKHYSNTLKALGISDE
              400       410       420       430       440       450

              650       660       670       680       690       700
pF1KE0 FVSKKGQSGKVLEYFNNQETKSVTEDKESFNEEEKIEERENGEENYFIDTNSQDSYKEKD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FVSKKGQSGKVLEYFNNQETKSVTEDKESFNEEEKIEERENGEENYFIDTNSQDSYKEKD
              460       470       480       490       500       510

              710      
pF1KE0 EANEESEEEKSVEESH
       ::::::::::::::::
XP_016 EANEESEEEKSVEESH
              520      

>>XP_016860561 (OMIM: 606068,613596) PREDICTED: protein   (551 aa)
 initn: 2929 init1: 2840 opt: 2865  Z-score: 1961.1  bits: 373.0 E(85289): 1.7e-102
Smith-Waterman score: 3532; 90.6% identity (90.6% similar) in 607 aa overlap (110-716:1-551)

      80        90       100       110       120       130         
pF1KE0 EDFVNFPDIHHSNEEYFKKVEELKAAHMETMAKLEKMYQDKLHLKEVQPVVIREDSLSDS
                                     ::::::::::::::::::::::::::::::
XP_016                               MAKLEKMYQDKLHLKEVQPVVIREDSLSDS
                                             10        20        30

     140       150       160       170       180       190         
pF1KE0 SRSVSGKNSYHPVSLMTSFSEPDLGQSSSLYVSSSEEELPNLEKEYPRKNRMMTYAKELI
       ::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SRSVSEKNSYHPVSLMTSFSEPDLGQSSSLYVSSSEEELPNLEKEYPRKNRMMTYAKELI
               40        50        60        70        80        90

     200       210       220       230       240       250         
pF1KE0 NNMWTDFCVEDYIRCKDTGFHAAEKRRKKRKEWVPTITVPEPFQMMIREQKKKEESMKSK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NNMWTDFCVEDYIRCKDTGFHAAEKRRKKRKEWVPTITVPEPFQMMIREQKKKEESMKSK
              100       110       120       130       140       150

     260       270       280       290       300       310         
pF1KE0 SDIEMVHKALKKQEEDPEYKKKFRANPVPASVFLPLYHDLVKQKEERRRSLKEKSKEALL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SDIEMVHKALKKQEEDPEYKKKFRANPVPASVFLPLYHDLVKQKEERRRSLKEKSKEALL
              160       170       180       190       200       210

     320       330       340       350       360       370         
pF1KE0 ASQKPFKFIAREEQKRAAREKQLRDFLKYKKKTNRFKARPIPRSTYGSTTNDKLKEEELY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ASQKPFKFIAREEQKRAAREKQLRDFLKYKKKTNRFKARPIPRSTYGSTTNDKLKEEELY
              220       230       240       250       260       270

     380       390       400       410       420       430         
pF1KE0 RNLRTQLRAQEHLQNSSPLPCRSACGCRNPRCPEQAVKLKCKHKVRCPTPDFEDLPERYQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RNLRTQLRAQEHLQNSSPLPCRSACGCRNPRCPEQAVKLKCKHKVRCPTPDFEDLPERYQ
              280       290       300       310       320       330

     440       450       460       470       480       490         
pF1KE0 KHLSEHKSPKLLTVCKPFDLHASPHASIKREKILADIEADEENLKETRWPYLSPRRKSPV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KHLSEHKSPKLLTVCKPFDLHASPHASIKREKILADIEADEENLKETRWPYLSPRRKSPV
              340       350       360       370       380       390

     500       510       520       530       540       550         
pF1KE0 RCAGVNPVPCNCNPPVPTVSSRGREQAVRRSLEEKKMLEEERNRILTKQKQRMKELQKLL
       :::::::::::::::::::::::::::::                               
XP_016 RCAGVNPVPCNCNPPVPTVSSRGREQAVR-------------------------------
              400       410                                        

     560       570       580       590       600       610         
pF1KE0 TTRAKAYDSHQSLAQISKSRVKCLRKSEKERMREYQRELEEREEKLKKRPLLFERVAQKN
                                :::::::::::::::::::::::::::::::::::
XP_016 -------------------------KSEKERMREYQRELEEREEKLKKRPLLFERVAQKN
                              420       430       440       450    

     620       630       640       650       660       670         
pF1KE0 ARMAAEKHYSNTLKALGISDEFVSKKGQSGKVLEYFNNQETKSVTEDKESFNEEEKIEER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ARMAAEKHYSNTLKALGISDEFVSKKGQSGKVLEYFNNQETKSVTEDKESFNEEEKIEER
          460       470       480       490       500       510    

     680       690       700       710      
pF1KE0 ENGEENYFIDTNSQDSYKEKDEANEESEEEKSVEESH
       :::::::::::::::::::::::::::::::::::::
XP_016 ENGEENYFIDTNSQDSYKEKDEANEESEEEKSVEESH
          520       530       540       550 

>>XP_016860563 (OMIM: 606068,613596) PREDICTED: protein   (470 aa)
 initn: 2425 init1: 2336 opt: 2361  Z-score: 1620.0  bits: 309.7 E(85289): 1.7e-83
Smith-Waterman score: 3028; 89.4% identity (89.4% similar) in 526 aa overlap (191-716:1-470)

              170       180       190       200       210       220
pF1KE0 PDLGQSSSLYVSSSEEELPNLEKEYPRKNRMMTYAKELINNMWTDFCVEDYIRCKDTGFH
                                     ::::::::::::::::::::::::::::::
XP_016                               MMTYAKELINNMWTDFCVEDYIRCKDTGFH
                                             10        20        30

              230       240       250       260       270       280
pF1KE0 AAEKRRKKRKEWVPTITVPEPFQMMIREQKKKEESMKSKSDIEMVHKALKKQEEDPEYKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AAEKRRKKRKEWVPTITVPEPFQMMIREQKKKEESMKSKSDIEMVHKALKKQEEDPEYKK
               40        50        60        70        80        90

              290       300       310       320       330       340
pF1KE0 KFRANPVPASVFLPLYHDLVKQKEERRRSLKEKSKEALLASQKPFKFIAREEQKRAAREK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KFRANPVPASVFLPLYHDLVKQKEERRRSLKEKSKEALLASQKPFKFIAREEQKRAAREK
              100       110       120       130       140       150

              350       360       370       380       390       400
pF1KE0 QLRDFLKYKKKTNRFKARPIPRSTYGSTTNDKLKEEELYRNLRTQLRAQEHLQNSSPLPC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QLRDFLKYKKKTNRFKARPIPRSTYGSTTNDKLKEEELYRNLRTQLRAQEHLQNSSPLPC
              160       170       180       190       200       210

              410       420       430       440       450       460
pF1KE0 RSACGCRNPRCPEQAVKLKCKHKVRCPTPDFEDLPERYQKHLSEHKSPKLLTVCKPFDLH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RSACGCRNPRCPEQAVKLKCKHKVRCPTPDFEDLPERYQKHLSEHKSPKLLTVCKPFDLH
              220       230       240       250       260       270

              470       480       490       500       510       520
pF1KE0 ASPHASIKREKILADIEADEENLKETRWPYLSPRRKSPVRCAGVNPVPCNCNPPVPTVSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ASPHASIKREKILADIEADEENLKETRWPYLSPRRKSPVRCAGVNPVPCNCNPPVPTVSS
              280       290       300       310       320       330

              530       540       550       560       570       580
pF1KE0 RGREQAVRRSLEEKKMLEEERNRILTKQKQRMKELQKLLTTRAKAYDSHQSLAQISKSRV
       ::::::::                                                    
XP_016 RGREQAVR----------------------------------------------------
                                                                   

              590       600       610       620       630       640
pF1KE0 KCLRKSEKERMREYQRELEEREEKLKKRPLLFERVAQKNARMAAEKHYSNTLKALGISDE
           ::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ----KSEKERMREYQRELEEREEKLKKRPLLFERVAQKNARMAAEKHYSNTLKALGISDE
          340       350       360       370       380       390    

              650       660       670       680       690       700
pF1KE0 FVSKKGQSGKVLEYFNNQETKSVTEDKESFNEEEKIEERENGEENYFIDTNSQDSYKEKD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FVSKKGQSGKVLEYFNNQETKSVTEDKESFNEEEKIEERENGEENYFIDTNSQDSYKEKD
          400       410       420       430       440       450    

              710      
pF1KE0 EANEESEEEKSVEESH
       ::::::::::::::::
XP_016 EANEESEEEKSVEESH
          460       470




716 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 16:08:59 2016 done: Thu Nov  3 16:09:01 2016
 Total Scan time: 13.470 Total Display time:  0.080

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com