GENSCAN 1.0	Date run:  3-Nov-116	Time: 16:09:25

Sequence gi568815596r:61726458_61954041 : 227584 bp : 42.43% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +    483    522   40                              -3.55
 1.01 Init +   5419   5499   81  0  0   45   94    64 0.111   3.72
 1.02 Term +  13684  13833  150  0  0   47   40   122 0.300   0.23
 1.03 PlyA +  13943  13948    6                               1.05

 2.00 Prom +  15981  16020   40                              -2.45
 2.01 Init +  19578  19640   63  2  0   65   65   100 0.504   6.60
 2.02 Term +  37421  37528  108  1  0   87   48   163 0.791   9.73
 2.03 PlyA +  38917  38922    6                               1.05

 3.00 Prom +  38940  38979   40                              -6.35
 3.01 Init +  41831  41971  141  1  0  110   35   133 0.466  10.39
 3.02 Intr +  47174  47245   72  1  0   95   88    25 0.295   1.88
 3.03 Intr +  64360  64468  109  0  1   75   71    63 0.019   2.24
 3.04 Term +  66028  66212  185  2  2   82   44    81 0.024  -0.18
 3.05 PlyA +  66477  66482    6                               1.05

 4.00 Prom +  71751  71790   40                              -7.55
 4.01 Init +  72062  72268  207  1  0   59   23   188 0.708   8.27
 4.02 Intr +  79159  79329  171  0  0   38   23   129 0.287   0.62
 4.03 Intr +  90771  90918  148  2  1   38   47   135 0.444   3.29
 4.04 Term +  93769  94139  371  2  2   29   36   359 0.963  18.62
 4.05 PlyA +  94322  94327    6                               1.05

 5.25 PlyA -  95093  95088    6                               1.05
 5.24 Term - 100142  99998  145  1  1   57   41   209 0.984   9.50
 5.23 Intr - 100801 100647  155  1  2   68   87   153 0.147  11.15
 5.22 Intr - 106449 106371   79  2  1   79   23    47 0.064  -4.07
 5.21 Intr - 112248 112081  168  2  0   44   69    99 0.636   1.74
 5.20 Intr - 114124 112964 1161  0  0   54  115   905 0.826  76.80
 5.19 Intr - 115903 115665  239  1  2   72  115   176 0.824  14.19
 5.18 Intr - 127752 127402  351  0  0   57   15   317 0.082  15.89
 5.17 Intr - 132988 132709  280  0  1   43   39   198 0.143   6.96
 5.16 Intr - 133660 133524  137  1  2   55   67   111 0.204   4.15
 5.15 Intr - 143096 142983  114  2  0   76  103   122 0.998  12.22
 5.14 Intr - 145859 145625  235  1  1   49   84   353 0.999  27.77
 5.13 Intr - 146131 146001  131  1  2   27   80   130 0.999   4.67
 5.12 Intr - 146655 146545  111  0  0   80   87   100 0.992   8.76
 5.11 Intr - 146836 146740   97  0  1   65   93    56 0.887   2.89
 5.10 Intr - 149777 149638  140  2  2   67   70    58 0.884   0.24
 5.09 Intr - 150595 150463  133  0  1  116  105    90 0.996  13.23
 5.08 Intr - 151057 150936  122  1  2   84   94    86 0.998   7.17
 5.07 Intr - 152554 152412  143  2  2   52  100   127 0.999   9.45
 5.06 Intr - 153937 153829  109  1  1   58   98   106 0.998   7.54
 5.05 Intr - 157091 157002   90  2  0   86  115    97 0.999  11.47
 5.04 Intr - 158615 158563   53  0  2   89   58    63 0.989   1.11
 5.03 Intr - 161692 161567  126  2  0   75   35   106 0.913   3.73
 5.02 Intr - 162313 161924  390  2  0   80   64   356 0.823  26.17
 5.01 Init - 169481 169328  154  2  1   86  107    49 0.588   6.80
 5.00 Prom - 174810 174771   40                              -7.95

 6.00 Prom + 178718 178757   40                              -4.25
 6.01 Init + 179222 179401  180  1  0   82   79   192 0.772  16.03
 6.02 Term + 185443 185466   24  0  0  111   37     1 0.133  -5.45
 6.03 PlyA + 185981 185986    6                               1.05

 7.00 Prom + 192277 192316   40                              -8.05
 7.01 Init + 197986 198091  106  0  1   77  105    96 0.325  10.63
 7.02 Intr + 206243 206366  124  0  1   68   33   123 0.408   3.52
 7.03 Intr + 212198 212309  112  2  1   79   36   135 0.410   6.86
 7.04 Term + 216521 216664  144  1  0   34   44   135 0.459   0.63
 7.05 PlyA + 218900 218905    6                               1.05

 8.02 PlyA - 219136 219131    6                               1.05
 8.01 Term - 224760 224547  214  2  1   62   40   166 0.437   4.92

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 100789 100647  143  1  2   76   87   143 0.853  12.65


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:61726458_61954041|GENSCAN_predicted_peptide_1|76_aa
MVTGVSLESDKLEVRAPGRGVQQWRCQSFARVWKWPDATLRHLGMLAAPDCLLIGPDTSS
TVPKSFLERRVVDVPY

>gi568815596r:61726458_61954041|GENSCAN_predicted_CDS_1|231_bp
atggtaacaggggtctccctggagtctgacaaattggaagtaagggcacctggaagagga
gtccagcagtggagatgccagagttttgctcgtgtttggaagtggccagatgctacactt
aggcatcttggaatgctagcagcccccgattgcctgctcattggtccagatacttcgagc
actgtcccaaaaagttttttagaaaggagagttgtagatgttccttattga

>gi568815596r:61726458_61954041|GENSCAN_predicted_peptide_2|56_aa
MKKKKKRKKKKEKKKGMKGKKLSEEPSYRKHATSGLGILGIGRTARDLRRRKTVTF

>gi568815596r:61726458_61954041|GENSCAN_predicted_CDS_2|171_bp
atgaagaagaagaagaagaggaagaagaagaaggagaagaagaaaggaatgaagggaaaa
aagctctccgaggagcccagctaccggaaacacgccacatcaggcctcggaattctgggc
atcggacggacagctcgtgacctcagaaggaggaaaacggtcaccttctga

>gi568815596r:61726458_61954041|GENSCAN_predicted_peptide_3|168_aa
MPGLQAVYSSAALASASGENLRKLPLLVEGEGKPVCHMARGGTRGKEAPSPTCGLLLNMR
FARGQIPKLYQRAYNGESMEGKRIVIIWKAAQSRCCTMELRQVHSIVDQNLNILIRGVHI
DNVASGCLDVDAKSQELSEKASCLLSGSLGCPLEVAALPAGREKVMGS

>gi568815596r:61726458_61954041|GENSCAN_predicted_CDS_3|507_bp
atgcctggcctgcaggctgtatattcatcagcagcactggcatctgcttctggtgagaac
ctcaggaagcttccactcttggtagaaggtgaagggaagccagtgtgtcacatggcaaga
gggggaacaagaggaaaggaggccccatctccaacatgtgggttacttctcaacatgaga
tttgcacggggacaaatacccaaactatatcagagagcttacaatggtgagagcatggaa
ggcaaaagaatagtcatcatctggaaagcagctcaaagtagatgttgtacaatggagctc
aggcaagttcacagcatcgtagaccaaaacttgaacattcttatccgtggggtccacata
gacaatgtggcatcaggctgtctggatgtagatgccaagagtcaggagttatctgagaag
gccagttgcctcttatctggaagtcttgggtgcccactggaagttgcagcccttccagcg
gggagggagaaagtcatgggaagctga

>gi568815596r:61726458_61954041|GENSCAN_predicted_peptide_4|298_aa
MNGINVLTKGDPRELSGPPSAMQEYSKKMAVSEPGSGPSDTDFARALLLDSPSSRTMRNK
SVVEATQSMINTVLPPIANCRVNVWLYRARCADPSSVLYQAQVPALMELQLPMICCSAQN
RLTQRQIILAAFQNQSSQNRQAALKENPAEKPQTEDNTINTAQGNKKMQECFSVPAKQLW
QLFTGGSSFETTDERLRSHSEQWGMLTGCVVMRDPNTKCSRGFGFVTYATVEEVDAAMNA
RPHKVDGRAVEPKRAVSREGSQRPGAHLTVKKVFVAGIKEDTEEHHLRDSRINVNTAR

>gi568815596r:61726458_61954041|GENSCAN_predicted_CDS_4|897_bp
atgaatgggattaatgtccttacaaaaggggaccccagagagctctctggccctccttct
gctatgcaagaatacagcaagaagatggctgtgtctgaaccaggaagtggaccctcagac
accgactttgctagagccttgctcttagactccccatcctccagaactatgagaaataaa
tctgttgttgaagccactcagtctatgataaataccgttcttcctcctattgcaaactgc
agagtgaatgtttggctttaccgagccaggtgtgcagaccccagttcagtcctgtaccag
gcacaggtccctgccctcatggagctgcaactgccaatgatctgttgcagtgcccaaaac
agacttacccagaggcagatcatattagcagctttccaaaaccagtcctcacaaaacaga
caagcggctttaaaagaaaatcctgcagagaaacctcagactgaagataatactattaac
acagcacaaggaaacaagaaaatgcaagaatgcttctctgtacctgccaagcagctgtgg
cagctcttcactggaggatcgagctttgaaacgactgatgagaggctgaggagccattct
gagcaatggggaatgctcacaggctgtgtggtcatgagagatcccaacaccaagtgctcc
aggggctttgggtttgtcacctatgccactgtggaggaggtggatgcagccatgaatgca
aggccacacaaggtggatgggagagctgtggaaccaaagagggctgtctcaagagaaggt
tctcaaagaccaggtgcccacctaactgtgaaaaaggtatttgttgctggcattaaagaa
gacactgaagaacatcacctaagagacagtaggataaatgtgaacactgctaggtaa

>gi568815596r:61726458_61954041|GENSCAN_predicted_peptide_5|1620_aa
MGSNGCGSCLVHGWTGLPLGPWSVGLVLGWRSADNAPITRCTDWCGFLLFPAPRAYNLAS
PEPTARILLARRAADSLLRHASAARQGRPPSPPPPPPDAGAAFWKVREGSEGLPLLHCGR
PESGSIRPSRANPDTAEFAMPENVAPRSGATAGAAGGRGKGAYQDRDKPAQIRFSNISAA
KVFHPALCIIHIGAESSSKCRGLHAVFTRDLTLEGCRLLLIGTAVADAIRTSLGPKGMDK
MIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDS
CTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVELSDRETLLNSATTSLNSKVVSQY
SSLLSPMSVNAVMKVIDPATATSVDLRDIKIVKKLGGTIDDCELVEGLVLTQKVSNSGIT
RVEKAKIGLIQFCLSAPKTDMDNQIVVSDYAQMDRVLREERAYILNLVKQIKKTGCNVLL
IQKSILRDALSDLALHFLNKMKIMVIKDIEREDIEFICKTIGTKPVAHIDQFTADMLGSA
ELAEEVNLNGSGKLLKITGCASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKR
ALIAGGGAPEIELALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTE
LRNRHAQGEKTAGINVRKGGISNILEELVVQPLLVSVSALTLATETVRSILKIDDVVDPF
LCFDDDEREHLLGTWGILCLGSEEWEILCFVGGESDALCFGSWLLGYWGMMHFWQWSCWR
QQPVHIHLQGFAEGKNLLVFQGALDVVLGSFSRGQRATPTHDADECLFHLTGDLLPLWLG
GILQGDGHFIDSAVLPEWILRDFWSLAAPVASPVTAPIATGSLARRPRVARGRTSFPVPG
QRRRSGLGGGAMATSHRVAKLVASSLQTPVNPITGARVAQYEREDPLKALAAAEAILEDE
EEEKVAQPAGASADLNTSFSGVDEHAPISYEDFVNFPDIHHSNEEYFKKVEELKAAHIET
MAKLEKMYQDKLHLKEVQPVVIREDSLSDSSRSVSEKNSYHPVSLMTSFSEPDLGQSSSL
YVSSSEEELPNLEKEYPRKNRMMTYAKELINNMWTDFCVEDYIRCKDTGFHAAEKRRKKR
KEWVPTITVPEPFQMMIREQKKKEESMKSKSDIEMVHKALKKQEEDPEYKKKFRANPVPA
SVFLPLYHDLVKQKEERRRSLKEKSKEALLASQKPFKFIAREEQKRAAREKQLRDFLKYK
KKTNRFKARPIPRSTYGSTTNDKLKEEELYRNLRTQLRAQEHLQNSSPLPCRSACGCRNP
RCPEQAVKLKCKHKVRCPTPDFEDLPERYQKHLSEHKSPKLLTVCKPFDLHASPHASIKR
EKILADIEADEENLKETRWPYLSPRRKSPVRCAGVNPVPCNCNPPVPTVSSRGREQAVRR
SLEEKKMLEEERNRILTKQKQRMKELQKLLTTRAKAYDSHQSLAQISKSRVKCLRPAVLN
LFGARDWFYGRPFFHRPGLRGKNARMAAEKHYSNTLKALGISDEFVSKKGQSGKVLEYFN
NQETKSVTEDKESFNEEEKIEERENGEENYFIDTNSQDSYKEKDEANEESEEEKSVEESH

>gi568815596r:61726458_61954041|GENSCAN_predicted_CDS_5|4863_bp
atgggctctaatgggtgtggatcctgtctggtccatgggtggactggactgcccctagga
ccttggtcagtagggctggtgttgggatggaggtctgcagacaatgcgcctattaccaga
tgcacagactggtgtggcttcctcctgtttcctgcgccccgggcgtacaatctcgccagc
ccggagcccaccgcacgcatcctcctcgcccggcgcgcagcggacagcctcctacgtcac
gccagcgccgcgcggcaaggaaggcccccttctccgcctccgcctcctcccgacgccggc
gccgctttctggaaggttcgtgaaggcagtgagggcttaccgttattacactgcggccgg
ccagaatccgggtccatccgtccttcccgagccaacccagacacagcggagtttgccatg
cccgagaatgtggcaccccggagcggggcgactgccggggctgccggcggccgcgggaaa
ggcgcctatcaggaccgcgacaagccagcccagatccgcttcagcaacatttccgccgcc
aaagtttttcatcctgcactgtgcatcattcatattggagccgaaagcagttcaaaatgc
cgaggattgcatgcagtcttcactagggatctgacgcttgagggctgtcgcttattgctt
attggaactgcggttgctgatgctattagaacaagccttggaccaaaaggaatggataaa
atgattcaagatggaaaaggtgatgtaaccattacaaatgatggtgctaccattctgaaa
caaatgcaagtattacatccagcagccagaatgctggtggagctgtctaaggctcaagat
atagaagcaggagatggcaccacatcagtagtcatcattgctggctccctcttagattct
tgtaccaagcttcttcagaaagggattcatccaaccatcatttctgagtcattccagaag
gccctggaaaagggcattgaaatcttgactgacatgtctcgacctgtggaactgagtgac
agagaaactttgttaaatagtgcaaccacttcactgaactcaaaggtggtttctcagtat
tcaagtctgctttctccaatgagtgtaaatgcagtgatgaaagtgattgacccagccaca
gccaccagtgtagatcttagagatattaaaatagttaagaagcttggtgggacaattgat
gactgtgagttggtggaagggctggttctcacccaaaaagtgtcaaattctggcataacc
agagttgaaaaggccaagattgggcttattcagttttgcttatctgctcccaaaacagac
atggataatcaaatagtggtttctgactatgcccagatggaccgagtgctgcgagaagag
agagcctatattttaaatttagtgaagcaaattaaaaaaacaggatgtaatgtccttctc
atacagaaatctattctaagagatgctcttagtgatcttgcattacactttctgaataaa
atgaagatcatggtgattaaggatattgaaagagaagacattgaattcatttgtaagaca
attggaaccaagccagttgctcatattgaccaatttactgctgacatgctgggttctgct
gagttagctgaggaggtcaatttaaatggttctggcaaactgctcaagattacaggctgt
gccagccctggaaaaacagttacaattgttgttcgtggttctaacaaactggtgattgaa
gaagctgagcgctccattcatgatgccctatgtgttattcgttgtttagtgaagaagagg
gctcttattgcaggaggtggtgctccagaaatagagttggccctacgattaactgaatat
tcacgaacactgagtggtatggaatcctactgcgttcgtgcttttgcagatgctatggag
gtcattccatctacactagctgaaaatgccggcctgaatcccatttctacagtaacagaa
ctaagaaaccggcatgcccagggagaaaaaactgcaggcattaatgtccgaaagggtggt
atttccaacattttggaggaactggttgtccagcctctgttggtatcagtcagtgctctg
actcttgcaactgaaactgttcggagcattctgaaaatagatgatgtggtagaccctttc
ctgtgctttgatgatgatgaaagagaacatctcttggggacttggggaatcctttgtttg
ggaagtgaagaatgggagatcctgtgctttgtgggtggagaaagtgatgccctttgtttt
ggaagttggctgctggggtattggggaatgatgcatttttggcagtggagttgctggagg
caacagccagtgcacattcaccttcaaggatttgctgaaggaaagaacttactagttttt
cagggggcgctggatgtcgtcttgggaagcttctcaagaggacaacgagctactcctaca
cacgatgctgatgagtgcctttttcatctcactggagatctgctcccgctatggcttggt
ggaatccttcaaggagatggccactttattgactctgctgttcttcctgagtggattttg
cgtgacttttggtccctggcggctcctgtagcgtccccagttacggcgcccatagcaacc
ggctccctagctaggcgcccccgggttgccaggggccgcaccagctttcccgtcccgggc
cagcgcaggcgctcaggcctcggaggcggggcgatggccacctcccaccgagtggcgaag
ctggtggcctccagtctccagaccccggtaaatcccatcactggagcgcgggtcgcccag
tacgaacgcgaagaccccttaaaggccctggcggcagcggaggcgatcttggaggacgaa
gaggaggagaaagtggctcagcccgctggggcatcggctgatttgaacaccagcttttct
ggggtggatgaacatgcaccgataagctatgaggactttgtgaactttcctgatattcac
cactctaatgaggagtatttcaagaaagtagaagagttgaaggctgcccacatagaaact
atggcaaaattagagaaaatgtaccaggataaattacatttaaaggaagttcagccagtg
gtcatcagagaagactctcttagtgactcttccagatctgtatcagaaaagaactcctat
caccctgtctcattaatgacatcattttcagagcctgatttaggccagtcttcctccttg
tatgtgtcctcctctgaagaggagttacccaacctagaaaaagagtatcctaggaaaaac
agaatgatgacctatgctaaggagctcatcaacaatatgtggacagacttttgtgttgag
gattatattcgctgtaaagatactggcttccatgcagctgaaaaaagaaggaagaaacga
aaagaatgggtgcccacaattacagtaccggagccttttcaaatgatgataagagaacag
aagaaaaaagaagagtccatgaaatctaaatcagatatcgaaatggtacataaagcgctc
aaaaaacaagaagaggatccagagtataagaagaaattccgagccaatccagttcctgca
tctgtctttctccccctttaccatgatttagtcaagcaaaaagaagaacggagaaggtct
ctgaaggagaaaagcaaagaagctcttttggcctcacaaaagccatttaaatttatagca
agggaggaacagaagcgagcagcccgggaaaagcagctgagagactttcttaagtataaa
aagaaaacaaatcgatttaaagccagacccattcctcgatctacttatggttcaactacc
aatgacaagttaaaagaagaagagctctatcgaaaccttaggacacagctgagagcccag
gagcatttacagaactcatctcctctgccttgtaggtcagcttgtggatgcaggaacccc
aggtgtcctgaacaggctgtaaagttgaagtgtaaacacaaggttaggtgcccaactcct
gattttgaggaccttcctgagagataccagaaacacctctcagaacacaagtctccaaaa
ctcttaacagtgtgtaaaccatttgatcttcatgcatctccacatgcatctattaaaaga
gaaaaaattttggcagacatcgaagcagatgaagaaaatttaaaagaaacacgttggcct
tatttgtctccaaggcgtaagtcaccagtaagatgtgcaggtgtaaaccctgtgccttgt
aactgcaaccctcccgtgcccacggtatcttccagaggacgagaacaagccgtaaggaga
tcacttgaggaaaagaaaatgttggaagaagagagaaatcggatcctaactaaacagaag
caaagaatgaaagaattgcagaaactcctgacaacccgggctaaggcttatgactcacat
caaagtttagctcaaatatctaaatccagagtaaaatgtctcaggccagcagtcctcaac
ctttttggcgctagagactggttttatggaagaccatttttccacagaccagggttgcgt
gggaaaaatgcaagaatggcagcagaaaagcattattctaataccctaaaagcactagga
atatctgatgagtttgtttcaaagaaaggccaaagtggaaaagtacttgagtacttcaac
aatcaagagacgaaaagtgtcactgaagacaaagaaagctttaatgaagaagaaaaaata
gaagaaagagagaatggggaagaaaattattttattgataccaacagccaggattcttac
aaggaaaaagatgaagccaatgaggaaagtgaagaagagaaatctgttgaagaatcacac
tga

>gi568815596r:61726458_61954041|GENSCAN_predicted_peptide_6|67_aa
MAAGELEGGKPLSGLLNALAQDTFHGYPGITEELLRSQLYPEVPPEEFRPFLAKMRGILK
HSNLVLI

>gi568815596r:61726458_61954041|GENSCAN_predicted_CDS_6|204_bp
atggcggcgggcgagcttgagggtggcaaacccctgagcgggctgctgaatgcgctggcc
caggacactttccacgggtaccccggcatcacagaggagctgctacggagccagctatat
ccagaggtgccacccgaggagttccgcccctttctggcaaagatgagggggattcttaag
cactctaatcttgtccttatttaa

>gi568815596r:61726458_61954041|GENSCAN_predicted_peptide_7|161_aa
MLFGGGLGCCRGGEKSARSKEEKSSARAVGVREAGGVWLVYLAAVCPNPLHEGAHERVQE
REQMNAGSSPVDPLWQDQILSCGEARTEVAVDSYGFAASNLDLFHWLTGCQMRENSSHEI
LTETYQFANNSKKKRLDANSGFYLSRKVTADLKQAEKKAER

>gi568815596r:61726458_61954041|GENSCAN_predicted_CDS_7|486_bp
atgctgttcggtggaggattaggatgttgtcgaggaggggagaaatcagccagatcaaag
gaggagaagtcgtcggctagggctgttggggtgagggaagcaggaggggtgtggcttgtt
tacttggctgccgtgtgcccaaaccccttgcatgagggagcacatgagcgagtgcaggaa
cgagagcaaatgaatgctggaagcagcccagttgatcctctctggcaggatcagattctt
tcttgtggagaggcaaggactgaagttgctgtggactcctacggatttgctgccagtaac
ttggatctcttccactggttaacaggatgccaaatgagagagaactctagccatgagata
ttaacagagacttaccagtttgcaaacaatagtaaaaagaaacggttggatgcaaacagt
ggattttatctcagtagaaaagtaacagcagacttaaagcaggctgaaaagaaagcagag
agatag

>gi568815596r:61726458_61954041|GENSCAN_predicted_peptide_8|71_aa
XAGITDISHCAQPQKDILPELPLSNFPLESPAVINPLSVGVSWNSAAIESLPIAIGSKKA
NRTIYTFQLKP

>gi568815596r:61726458_61954041|GENSCAN_predicted_CDS_8|216_bp
nntgctgggattacagatataagccactgtgcccagccgcagaaagacatattacctgaa
cttcccttatccaacttccctctggaaagcccagctgtcattaaccctctctccgtggga
gtttcctggaattcagctgccatagagagtctgcccattgccattggcagcaaaaaggcc
aacagaaccatctacaccttccaattgaagccctaa