GENSCAN 1.0	Date run:  6-Nov-116	Time: 21:26:36

Sequence gi568815584r:36417281_36619357 : 202077 bp : 41.35% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   4747   4786   40                              -1.95
 1.01 Init +  13719  13791   73  2  1   80   60    73 0.384   4.98
 1.02 Intr +  31486  31557   72  2  0  101   91    28 0.002   2.86
 1.03 Intr +  43129  43212   84  2  0   66   69    70 0.045   1.77
 1.04 Intr +  44928  45038  111  1  0   78   98    21 0.126   1.53
 1.05 Intr +  59627  59787  161  0  2   16   94   186 0.656  10.79
 1.06 Intr +  60311  60547  237  1  0   73   72   130 0.660   6.79
 1.07 Intr +  82820  82930  111  1  0   76   58    46 0.087   0.06
 1.08 Intr +  85457  85488   32  1  2   90   61    56 0.320  -0.89
 1.09 Intr +  86736  86913  178  0  1   62   14   120 0.368   1.00
 1.10 Term +  87012  87320  309  2  0   53   36   242 0.837   9.58
 1.11 PlyA +  87975  87980    6                               1.05

 2.08 PlyA -  89578  89573    6                               1.05
 2.07 Term -  97201  96747  455  2  2   16   54   286 0.924  12.33
 2.06 Intr -  98532  98461   72  1  0   61   44   111 0.004   2.46
 2.05 Intr - 100740 100012  729  1  0  102   16   681 0.004  52.77
 2.04 Intr - 102090 101705  386  2  2  126  100   433 0.963  41.87
 2.03 Intr - 102332 102188  145  0  1   45   87    22 0.426  -3.78
 2.02 Intr - 103398 103277  122  2  2   28   72   124 0.485   4.02
 2.01 Init - 103980 103607  374  0  2   44  -42   306 0.996   9.68
 2.00 Prom - 104227 104188   40                              -9.95

 3.02 PlyA - 104254 104249    6                               1.05
 3.01 Sngl - 108270 107719  552  0  0   69   40   338 0.828  22.96
 3.00 Prom - 117654 117615   40                              -3.35

 4.00 Prom + 121752 121791   40                              -7.15
 4.01 Init + 127159 127228   70  0  1   85   22    89 0.196   3.26
 4.02 Term + 132065 132273  209  0  2   92   48   118 0.365   4.72
 4.03 PlyA + 132377 132382    6                               1.05

 5.09 PlyA - 132892 132887    6                               1.05
 5.08 Term - 140248 140141  108  1  0   54   48    96 0.302  -0.27
 5.07 Intr - 143808 143665  144  0  0   52   86   104 0.267   6.16
 5.06 Intr - 159487 159408   80  2  2   63  119    37 0.068   2.65
 5.05 Intr - 160584 160487   98  2  2    2   21   169 0.713   0.33
 5.04 Intr - 162491 162391  101  2  2   45   80    59 0.723  -1.21
 5.03 Intr - 162978 162889   90  0  0   61   80   163 0.730  12.07
 5.02 Intr - 164184 163778  407  1  2  120   59   450 0.902  38.44
 5.01 Init - 164590 164290  301  1  1   61   -1   263 0.470  12.48
 5.00 Prom - 164689 164650   40                              -6.35

 6.03 PlyA - 165656 165651    6                               1.05
 6.02 Term - 167066 166891  176  0  2    7   47   237 0.837   8.44
 6.01 Init - 168200 168152   49  2  1   28  115    86 0.786   6.46
 6.00 Prom - 168877 168838   40                              -5.35

 7.06 PlyA - 169341 169336    6                               1.05
 7.05 Term - 174705 174550  156  0  0  102   48    98 0.600   4.15
 7.04 Intr - 177800 177651  150  2  0   79   16   114 0.475   2.74
 7.03 Intr - 180375 180283   93  0  0  133   45    49 0.575   4.34
 7.02 Intr - 195612 195549   64  2  1   94   84    46 0.226   2.60
 7.01 Intr - 200552 200506   47  2  2  119   60    48 0.150   1.39

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr - 159487 159343  145  2  1   63   44   130 0.841   4.52


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584r:36417281_36619357|GENSCAN_predicted_peptide_1|455_aa
MVSTGSVDVVQGSERKRSLVEKRLEFLNTIWTVYIPEAHQSQSNKPWAAFLLKYAPKTCS
DIFPEIPPQRSDQKAKRYVKELLDDQNDLKYLEKSYQLHAMAHTCNPSTSGGQGRESAQE
QSQRPYFNEYSHDNTLASDELLLCDSVVGCSRAVWTVPGLGTQTATQIKGRIRRGPEARL
GDRRCYGKQESRGKWGRKLESQASGGHSTFLRAVIGYYALEERRKYVTETFRGNEQIAHL
FFPYVQALPMMQMSSKGACSAEARDALDTKTHFPLAMIPSYLLLNGNIGELPEGPAGGCA
QNPGLWASGARRGDEEVKPRALRRFDGRRASAGSEEDPAKKSARPHPWSRPCASPYRGAG
GQRLRRACSAAGRKTPDRRPLPEPTRGPVSQRAVLGKLRAAAGHRIPIGDLGDGLSLGAP
PAGRHLHTVLPLRREFSPCEDALGIGEQQGKKRVT

>gi568815584r:36417281_36619357|GENSCAN_predicted_CDS_1|1368_bp
atggtgtccacaggcagtgtggatgttgtccagggaagtgagcgaaagaggtccttagtg
gaaaaaagattagaattcttgaacactatttggacagtctatataccggaagcccatcag
tcacagagcaacaagccatgggcagccttccttctgaaatatgcaccaaaaacttgttct
gatatctttccagaaatcccaccccagagaagtgaccagaaagccaaaagatatgttaaa
gagctattagatgaccagaatgacctgaaatatcttgaaaagagttatcagctgcatgcg
atggctcacacctgtaatcccagcacttcaggaggccaaggaagagaatctgcccaagaa
caaagtcagcgtccctactttaacgaatattctcatgacaacaccttggcctcggatgaa
ctcctgctttgtgacagcgtcgtgggatgcagcagggctgtatggactgttcctggactt
ggcacgcaaacagcgacacagattaagggcaggattcgtcggggacctgaggcaaggcta
ggggacagaaggtgttatggcaaacaggagtcaagagggaaatgggggaggaagttggag
agccaagcaagtggtggtcacagtacctttctgagagcagtcattggttattatgctctg
gaggagaggaggaaatacgtaacagagaccttcagagggaacgagcagatcgcacatttg
ttctttccatatgtccaggcactgccaatgatgcaaatgtcttctaaaggagcctgctca
gctgaagccagggatgcccttgatacaaaaacacactttccacttgcaatgataccctca
tatttactgctaaatgggaatattggagagctgccagagggcccggcgggaggctgcgcc
cagaatcctgggctttgggcctctggggcccggcgaggagatgaagaagtcaagcctcga
gctctccggaggttcgatggccgccgggccagtgcgggctcagaggaagaccctgcaaaa
aagagcgctcgcccccacccctggagccgaccctgcgcatcgccgtatcgcggggctggc
ggccagcgccttagaagagcctgctccgccgcaggaagaaagacgcccgacaggcgccca
ctgcccgaacccacgcgggggccagtcagccagcgggccgtgttgggaaagctccgcgcg
gcggcgggacataggatccccatcggggacctgggcgacggcctgagcttgggcgcccct
ccagctgggcgtcatctccacacagttcttcccttgcgccgcgaattcagcccctgtgaa
gacgctttgggcattggcgagcaacaggggaaaaaacgagtcacttaa

>gi568815584r:36417281_36619357|GENSCAN_predicted_peptide_2|760_aa
MIKTFKIQGQKPESVSKSAPFSAPLGSRLGCRPRPGRSNAGDTPDSAGERSPQLPLARRP
RTLKARGPHLKPGNAQTGNPLPPKQFLARRMRGAQLKQNDPHLLISSVATKRLAIYATTL
NKDICIRGENSVALGSGAGAVMSSESQLQPQIPACLGDGRGSGTPALTPRLWWLPKTWRR
AKTNARQPPSLHSSQLRRTRSTPLRVHPTRSALSRRRIMSMSPKHTTPFSVSDILSPLEE
SYKKVGMEGGGLGAPLAAYRQGQAAPPTAAMQQHAVGHHGAVTAAYHMTAAGVPQLSHSA
VGGYCNGNLGNMSELPPYQDTMRNSASGPGWYGANPDPRFPAISRFMGPASGMNMSGMGG
LGSLGDVSKNMAPLPSAPRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTP
TQVKIWFQNHRYKMKRQAKDKAAQQQLQQDSGGGGGGGGTGCPQQQQAQQQSPRRVAVPV
LVKDGKPCQAGAPAPGAASLQGHAQQQAQHQAQAAQAAAAAISVGSGGAGLGAHPGHQPG
SAGQSPDLAHHAASPAALQGQVSSLSHLNSSGSDYGTMSCSTLLYGTPLGDQQQTPSAPA
AFGSFGLQRGELNRVCGPRQTGPQPLSCHQLRWLHPLPLPAGGIVAAAGRDLERNLKRFI
REIGARWEQCKRVPQPGDTLRPYSTVGFWKADSPPFWESPASTRAQFLASPLGEISILRM
PLALRCLEASEVWEQVRFTPRSPRSFASAKVPYPSLGPNG

>gi568815584r:36417281_36619357|GENSCAN_predicted_CDS_2|2283_bp
atgataaaaacgtttaaaatccaaggacaaaaaccggagtcggtctcaaaatccgcgccg
ttcagtgctccactcggtagtcgactcggctgcaggccccggcctggccggagcaacgcg
ggggacacccccgattccgctggggagcgcagcccacagctccccctcgccaggcgccca
aggaccctcaaggcgcggggcccacacttgaagcctgggaacgcgcagacaggaaaccct
cttcctcctaagcagtttcttgctcgtcggatgagaggcgcccaattgaagcagaatgat
cctcatctactaatatccagcgtggccacaaagcgactggccatttacgccaccacttta
aacaaagatatttgcatcagaggggaaaacagcgtggctctgggctcgggtgctggggct
gtgatgtcctcggaaagtcagctccagccccagatccccgcgtgtctgggagatgggcga
gggtcagggacaccagcgcttacgccccgcctctggtggctgcctaaaacctggcgccgg
gctaaaacaaacgcgaggcagcccccgagcctccactcaagccaattaaggaggactcgg
tccactccgttacgtgtacatccaacaagatcggcgttaagccgccgccgaatcatgtcg
atgagtccaaagcacacgactccgttctcagtgtctgacatcttgagtcccctggaggaa
agctacaagaaagtgggcatggagggcggcggcctcggggctccgctggcggcgtacagg
cagggccaggcggcaccgccaacagcggccatgcagcagcacgccgtggggcaccacggc
gccgtcaccgccgcctaccacatgacggcggcgggggtgccccagctctcgcactccgcc
gtggggggctactgcaacggcaacctgggcaacatgagcgagctgccgccgtaccaggac
accatgaggaacagcgcctctggccccggatggtacggcgccaacccagacccgcgcttc
cccgccatctcccgcttcatgggcccggcgagcggcatgaacatgagcggcatgggcggc
ctgggctcgctgggggacgtgagcaagaacatggccccgctgccaagcgcgccgcgcagg
aagcgccgggtgctcttctcgcaggcgcaggtgtacgagctggagcgacgcttcaagcaa
cagaagtacctgtcggcgccggagcgcgagcacctggccagcatgatccacctgacgccc
acgcaggtcaagatctggttccagaaccaccgctacaaaatgaagcgccaggccaaggac
aaggcggcgcagcagcaactgcagcaggacagcggcggcggcgggggcggcgggggcacc
gggtgcccgcagcagcaacaggctcagcagcagtcgccgcgacgcgtggcggtgccggtc
ctggtgaaagacggcaaaccgtgccaggcgggtgcccccgcgccgggcgccgccagccta
caaggccacgcgcagcagcaggcgcagcaccaggcgcaggccgcgcaggcggcggcagcg
gccatctccgtgggcagcggtggcgccggccttggcgcacacccgggccaccagccaggc
agcgcaggccagtctccggacctggcgcaccacgccgccagccccgcggcgctgcagggc
caggtatccagcctgtcccacctgaactcctcgggctcggactacggcaccatgtcctgc
tccaccttgctatacgggacccctctaggggaccagcagcagacgccttcagcccctgct
gcttttggctcctttggcctccaacggggtgaactcaatcgggtttgcggaccgagacaa
acaggacctcagcctctttcttgccatcaattacgctggctccatccgctcccgctcccg
gctgggggaattgtcgcagctgcgggaagagacctagaacgcaatctgaagcgtttcatt
agggaaataggtgcgcgctgggagcagtgcaagagggttccgcaacctggggacaccctc
cgcccctacagcaccgtcggcttctggaaagccgacagtcctcctttctgggaatctcct
gcatcaactcgtgcccaatttctggcctcccctctcggagaaatcagcattctgaggatg
cccctggcgctgaggtgcttggaagcttccgaggtttgggagcaagtacggttcaccccg
agatcaccgcgaagctttgcctccgccaaagtaccctacccatccctaggccccaacggc
tga

>gi568815584r:36417281_36619357|GENSCAN_predicted_peptide_3|183_aa
MAWGRYCGHRKLPGTSVGDVGETGCGGRLERRKGAEEGTPALLASPRETRTPKAHGLPLL
GLRFVGEQRAERAIGFDYLKLNEAAQVLGRKQPRRHKDASGICPLIIRSSCETYLSAART
LERPRGCPCPFRRGRLADSRRSTAARASQGRLTASGPCSYLPSPSWFPRNSKGAAELPLF
SAL

>gi568815584r:36417281_36619357|GENSCAN_predicted_CDS_3|552_bp
atggcctggggtcgatactgcggccaccggaaactgcctgggacaagtgttggggatgtg
ggggagacgggctgtggtgggaggttggagaggaggaaaggagcggaggagggaacccca
gcgctgctggcaagcccgcgggaaactcgaacacccaaggcccacgggctcccactgttg
ggactgagatttgttggggaacagagggcagaaagagctataggtttcgactacctaaag
ctgaatgaggctgcacaggtcctggggcgaaaacagccgcgccgccacaaggatgcttcg
ggaatctgtcctttaattatcaggagcagctgcgaaacttaccttagcgcagcacgaacc
ctagagcgcccccgagggtgtccctgccccttccgacgggggcgtctggcggattcgcgg
cgtagcacggcagcgcgggcctcacagggtcggctgaccgcttcaggcccgtgctcctac
ctcccgtctccgtcttggtttcctcgcaattcaaagggagctgctgagctcccgctgttc
tctgctttgtaa

>gi568815584r:36417281_36619357|GENSCAN_predicted_peptide_4|92_aa
MGASLDQEHSGHPAGSGGIEVSGGTQCVLSMKAAIFQDRPFTWFGAGSPWEGEIGFPAPT
RRPAQLVDGQLMLSRGVLPTPTPHLWGSALAQ

>gi568815584r:36417281_36619357|GENSCAN_predicted_CDS_4|279_bp
atgggtgcctcgctggatcaggagcacagtggacaccctgccggatccggagggatagaa
gtcagcggcggtacccagtgtgtcctcagcatgaaagctgcaatttttcaggatcgtcca
ttcacttggtttggggctgggagcccatgggaaggggagattggctttcctgcccccact
cggagaccagcgcagctggtagatggtcagctaatgctgagtcgtggggtgctccccacc
ccaactccacatctgtggggatctgcacttgcccagtga

>gi568815584r:36417281_36619357|GENSCAN_predicted_peptide_5|442_aa
MASVGEFTPTPFPLRAPQTSAHCSAVDLEEAGAGDPACDKLVGQRNYRCGHVKRAPGWVF
SGHDLRPADDRCGMNEVTAFGEVDVQMWTQEMASSRKSRATSDESSLETSPPDSSQRPSA
RPASPGSDAEKRKKRRVLFSKAQTLELERRFRQQRYLSAPEREQLASLLRLTPTQVKIWF
QNHRYKLKRARAPGAAESPDLAASAELHAAPGLLRRVVVPVLVRDGQPCGGGGGGESCWR
FEYRKVNPVDHDRAEGVSPEMSRRGQGLLCKQSLSHRSDDLAPRHPLLGDAPEESSWGIR
AQQEEPKEDAGQQCQGCECMCRGYQGPRKGQGDTTTPTTQVGKLKAKKVRRDLSRVIRLF
SGGGSLQYHTGTHRFRNVGQRRGRKRKGKARAEALIVVVMGKDGRERKVGSIKQSNNQLF
EKLRESQLCFAGGKIEGALILE

>gi568815584r:36417281_36619357|GENSCAN_predicted_CDS_5|1329_bp
atggccagtgttggcgagtttacccccaccccgttcccactcagggctccgcaaacctcg
gcacactgcagtgcagtcgacctggaggaggccggcgctggtgacccagcttgtgataaa
ctggtcggccagcgcaactaccggtgcggacatgttaagagggccccggggtgggttttt
tcggggcacgatctcaggcccgctgatgaccgctgtggtatgaatgaggtcaccgcattc
ggagaggtggatgtccagatgtggactcaggaaatggcctcatcccgaaagtctcgggct
acctcggacgagagcagcctggagaccagcccgccagactcgtcgcagcggccgtccgct
aggcccgcgtctccgggctcggacgccgagaaaaggaagaagcggcgggtgctattctcc
aaggcgcagacgctggagttggagcggcgcttccggcagcagcggtacctgtctgcgccc
gagcgcgagcagctggcgagcctgcttcgcctcacgcccacgcaggtcaagatctggttc
cagaatcatcgctacaagctgaagcgcgctcgcgctccaggggcggcggagtcgcctgac
ctggcagcatccgccgagctgcacgccgcgcccggcctgctgcgtcgcgtggtggtgccg
gtgcttgttcgcgacgggcagccgtgcggcggcggcggcggtggcgagagctgctggcgt
ttcgaataccgaaaagtcaaccctgtggaccacgacagggcagaaggagtttctccggag
atgagccggcgaggccagggcctcttgtgcaagcagtcactttctcacagaagcgacgac
ctcgctcccaggcacccgctgctgggagatgcgccagaggagagcagttggggcatcaga
gcacaacaagaagagcctaaagaagatgcaggccagcaatgccaaggctgtgagtgtatg
tgccgaggctatcaaggccctcgtaaaggccaaggagatactactactcccactacacaa
gtgggaaaattgaaggccaaaaaggttagaagagacttgtccagggtcatacggctgttc
tcaggaggagggagcttgcagtaccacacagggacacatagatttcgaaatgtgggtcag
aggagaggcagaaagagaaaagggaaagcacgggcagaagccttgattgtggttgtcatg
ggaaaggatgggagagaaaggaaagttggaagcataaaacagtccaataaccagttgttt
gaaaagctaagggaaagccagttgtgttttgctggtggcaaaattgaaggtgcactgatt
ctggaataa

>gi568815584r:36417281_36619357|GENSCAN_predicted_peptide_6|74_aa
MAEALMAEEEGIQDEADITNKSIARAAERRPAESIVLPIPLNPIENHDNTGQAPIYPGAL
KRIVSRRQSCIIPD

>gi568815584r:36417281_36619357|GENSCAN_predicted_CDS_6|225_bp
atggcagaggcacttatggcagaggaggagggaatccaagatgaagcagacataactaat
aaatctattgccagggccgcggaaagacggccagcagagtcgatcgtgctcccaatccca
ttgaaccccattgaaaaccatgacaacaccggacaagctccgatttatcccggcgcgtta
aagcgcattgtgagcagacgtcaatcatgcattattccggactga

>gi568815584r:36417281_36619357|GENSCAN_predicted_peptide_7|169_aa
PRWSHEQTVAAEWGKRTKALTGSQGHILELPSLQVLELQLSNRETATAQLPTSIAAPVPS
FGFISGNLVSKFLTQSCGQCFLGTRSHSVEVQKHGKISRAEAAQKTFLDRSGSTRAQEVS
AFVSNASDSVLMWCFTRANERELLLQDALAELRGFKCYFRNSHARKNES

>gi568815584r:36417281_36619357|GENSCAN_predicted_CDS_7|510_bp
cccaggtggagccatgaacaaacagtggctgctgagtgggggaagaggacaaaagcactc
accggaagccagggccatatccttgaacttccaagcctgcaagtccttgagcttcaacta
agcaacagggagacagccacagcccagctgcccacctccatagcagcccccgtcccttca
tttgggttcatctctggcaacttggtttccaagttcttaacccagtcatgtgggcaatgc
ttcctaggaaccagaagtcactcagtagaggtgcagaaacatggcaaaatcagcagagct
gaagcggcacagaaaacattcctggacaggtcggggagtacgagagcccaggaagtaagt
gcatttgtttccaatgcgtctgattctgttcttatgtggtgtttcacacgtgctaacgag
agagaacttttactacaagatgctctggctgaattgagaggattcaaatgctacttcagg
aactcacatgctagaaagaatgaatcctga