GENSCAN 1.0	Date run:  3-Nov-116	Time: 17:41:42

Sequence gi568815592r:49860295_50064105 : 203811 bp : 34.78% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  27271  27352   82  0  1  120   44    63 0.000   3.39
 1.02 Intr +  32676  32828  153  1  0   71   96    67 0.028   4.92
 1.03 Term +  35736  35977  242  1  2   63   47   145 0.237   3.10
 1.04 PlyA +  36033  36038    6                               1.05

 2.00 Prom +  36409  36448   40                              -5.15
 2.01 Init +  63077  63167   91  1  1   82   99    76 0.906   8.80
 2.02 Term +  73294  73913  620  2  2   -2   37   430 0.877  22.51
 2.03 PlyA +  76046  76051    6                               1.05

 3.03 PlyA -  78203  78198    6                               1.05
 3.02 Term -  85931  85807  125  0  2   88   43    83 0.058   1.37
 3.01 Init -  96225  96168   58  0  1   65  111    16 0.027   3.12
 3.00 Prom -  97533  97494   40                              -4.35

 4.04 PlyA -  98114  98109    6                               1.05
 4.03 Term - 100152  99998  155  1  2   53   48   144 0.725   4.00
 4.02 Intr - 101813 101699  115  2  1   72   39    83 0.084   0.90
 4.01 Init - 125556 125443  114  0  0   83   91    73 0.836   7.36
 4.00 Prom - 135447 135408   40                              -2.55

 5.00 Prom + 169062 169101   40                              -3.35
 5.01 Sngl + 170038 170454  417  0  0   85   49   124 0.759   4.27
 5.02 PlyA + 170976 170981    6                               1.05

 6.03 PlyA - 176730 176725    6                               1.05
 6.02 Term - 183507 183281  227  1  2   84   49   143 0.954   5.96
 6.01 Init - 188315 188243   73  2  1   54   98   100 0.982   8.88

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  90310  90338   29  0  2   77   86    74 0.872   5.22


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592r:49860295_50064105|GENSCAN_predicted_peptide_1|158_aa
VMSGACVIRGSSIIWGYGSCRVISFISEPTHVRRNQKTYPGNMTKQGSSTPPRKITLVHQ
QQTQTEKKSLIYLKNSSEVLEALARAIRREKEINGIQISKEEVKLSLFADDMIVYLENPE
DSSRKLLELIKKKFSKVCRCKINVHEELQISSSSIHQQ

>gi568815592r:49860295_50064105|GENSCAN_predicted_CDS_1|477_bp
gtaatgtctggggcttgtgtcatccgaggaagcagcatcatctggggttacggatcctgc
agggtcatttccttcatttctgagcctacccatgtgagaaggaaccagaaaacctatcct
ggtaatatgacaaaacaaggctcttcaacacccccccgcaaaatcacactagttcaccag
cagcagacccaaaccgagaagaaatccctgatttacctaaaaaatagttcagaagtactg
gaagccctagccagagcaatcagaagagagaaagaaataaatggcatccaaatcagtaaa
gaggaagtcaaactgtcactgtttgctgatgatatgattgtttatcttgaaaaccctgag
gactcctccagaaagctcctagaactgataaaaaagaaattcagtaaagtttgcagatgc
aagatcaatgtacacgaagagctacaaatcagtagctcttctatacaccagcaatga

>gi568815592r:49860295_50064105|GENSCAN_predicted_peptide_2|236_aa
MQQQGVEDRKLNQLKVTDFQSWLDKGIENTGALQPAAAPWDPFSGLAEDGAGSLGLREGV
EGEAQVGTGAACSACRPARVPGGHGLGGPALAGAGWPCWPRAVRGLAPRPAAAEGAPRPR
THREGLQLHSSAARPRTHQEDPNSRRAALRAVTLTAMVCSFTPEPARPRTHQKEETPNTS
EHQKEQTPDTLPLRTVTLIARVRGFILEVSETKNPPIPDTVVLIAINLLPFSPPLH

>gi568815592r:49860295_50064105|GENSCAN_predicted_CDS_2|711_bp
atgcagcaacaaggtgtagaagacaggaagttgaatcaactcaaggttacagattttcag
agttggctggacaagggtattgaaaatactggagcccttcagcccgctgctgcaccatgg
gaccccttctctgggctggccgaggacggagccggctccctgggcttgcgggaaggtgtg
gagggagaggcacaggtgggaaccggtgctgcatgcagcgcttgcaggccagctagagtt
ccaggtgggcatgggcttggtggccccgcactagcaggggccggctggccctgctggccc
cgggcagtgaggggcttagcacccaggccagcagctgcggagggtgcgccccgtccccgc
actcaccgtgaaggtctgcagcttcactcctcagcggcgagaccacgaacccaccaggag
gatcccaactccagacgtgccgccttaagagctgtgacactcaccgcgatggtctgcagt
ttcactcctgagccagcgagaccacgaactcaccagaaggaagaaactccaaacacatcc
gaacatcagaaggaacaaactccggacacgctgcctttaagaactgtaacactcatcgcc
agggtccgcggcttcattcttgaagtcagtgagaccaagaacccaccaattccggacaca
gtagtacttattgcaattaatcttctccctttttccccaccactgcactaa

>gi568815592r:49860295_50064105|GENSCAN_predicted_peptide_3|60_aa
MKNQYKRLTRNGQYIRRQPVKCAVKDTYSCFIMRGKCRHECHDFEKPIGFCTKLNANCYM

>gi568815592r:49860295_50064105|GENSCAN_predicted_CDS_3|183_bp
atgaagaaccagtataagagactaacgagaaatggccaatatattaggagacaaccagtg
aaatgtgccgtgaaagacacctatagttgctttatcatgagaggcaaatgtcgacatgag
tgtcatgattttgaaaaaccaattggtttctgcacaaaactaaatgccaactgttatatg
tag

>gi568815592r:49860295_50064105|GENSCAN_predicted_peptide_4|127_aa
MDEAGNHHSQQTDTGTENQTLYVLIHKWELNNENTWTQGYAQQKCLSMCPKSQVQKYSKM
GNNLNIHQQIRLKCRISTCTLVNADRCTKRYGRCKRDCLESEKQIDICSLPRKICCTEKL
YEEDDMF

>gi568815592r:49860295_50064105|GENSCAN_predicted_CDS_4|384_bp
atggatgaagctggaaaccatcattctcagcaaactgacacaggaacagaaaaccaaaca
ctgtatgttctcattcataagtgggagttgaacaatgagaacacatggacacagggatat
gcccaacaaaaatgcctgagcatgtgccccaagagtcaagtacaaaagtattcaaaaatg
ggaaacaacctgaatattcatcagcagataaggctaaaatgtcgtatatccacatgtacc
ttggtgaatgctgatcgttgcaccaaacgttacggtcgttgtaaaagagactgtcttgag
agtgaaaagcaaatagacatatgttccttaccaagaaaaatttgctgcactgagaaattg
tatgaagaagatgatatgttttga

>gi568815592r:49860295_50064105|GENSCAN_predicted_peptide_5|138_aa
MGLQQAPSQGPLCAGELRLSSAMDAHPRALCHSERLCPQLTTRTGDSRASFPAGMGHEGP
ARPACPPVPPRAPAWPSHRNIDTAHALLPGLGALFRLKEFWQPGILLDPPKHPERNPEGP
EKGEAPSKSWCFRAAACS

>gi568815592r:49860295_50064105|GENSCAN_predicted_CDS_5|417_bp
atggggcttcagcaggcaccaagccagggacctttgtgtgcgggagagctccggttgagc
tccgctatggatgcccatcccagggctctctgtcactctgagaggctctgtcctcagcta
accacaagaacgggagatagcagagccagtttccccgcgggaatggggcacgaaggtcct
gcaaggcccgcctgcccgccagtccctcccagggctcccgcctggccatcccacagaaat
atagacactgcgcatgctctactgcccggcctgggtgctttgttccgactgaaggaattt
tggcagcctggaatccttttggatcccccaaaacacccagaacgcaaccctgaaggtcca
gagaagggagaagccccaagcaagtcctggtgtttcagggctgcagcctgcagctaa

>gi568815592r:49860295_50064105|GENSCAN_predicted_peptide_6|99_aa
MYSKTNTSSTIFEKARHGTEKISTARSEGHHITFSRWKSCTAIGGRCKNQCDDSEFRISY
CARPTTHCCVTECDPTDPNNWIPKDSVGTQEWYPKDSRH

>gi568815592r:49860295_50064105|GENSCAN_predicted_CDS_6|300_bp
atgtactcaaagacaaatacatcttccacaatatttgaaaaggcccgacatgggacagag
aaaatcagcacagccagaagtgaagggcaccatatcacctttagtaggtggaagtcatgt
acagcgattggaggtcgatgtaaaaatcaatgtgatgatagtgaatttaggatttcatac
tgtgcaagacctacaactcattgctgcgtgacagaatgtgaccctacggacccaaataat
tggatcccaaaggactcagtagggactcaagaatggtaccctaaagactcacgtcattga