Result of FASTA (omim) for pF1KE0284
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0284, 337 aa
  1>>>pF1KE0284 337 - 337 aa - 337 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.5662+/-0.000311; mu= 16.3657+/- 0.019
 mean_var=95.9292+/-19.520, 0's: 0 Z-trim(119.4): 25  B-trim: 528 in 1/51
 Lambda= 0.130948
 statistics sampled from 33441 (33466) to 33441 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.754), E-opt: 0.2 (0.392), width:  16
 Scan time:  7.700

The best scores are:                                      opt bits E(85289)
NP_076971 (OMIM: 609917) ERI1 exoribonuclease 3 is ( 337) 2391 461.5 1.2e-129
XP_016857790 (OMIM: 609917) PREDICTED: ERI1 exorib ( 335) 2367 456.9 2.7e-128
XP_005271243 (OMIM: 609917) PREDICTED: ERI1 exorib ( 286) 1967 381.3 1.4e-105
NP_001288627 (OMIM: 609917) ERI1 exoribonuclease 3 ( 259) 1798 349.3 5.1e-96
NP_001288628 (OMIM: 609917) ERI1 exoribonuclease 3 ( 259) 1798 349.3 5.1e-96
XP_016857792 (OMIM: 609917) PREDICTED: ERI1 exorib ( 259) 1798 349.3 5.1e-96
NP_001288629 (OMIM: 609917) ERI1 exoribonuclease 3 ( 208) 1374 269.1 5.7e-72
XP_016857791 (OMIM: 609917) PREDICTED: ERI1 exorib ( 208) 1374 269.1 5.7e-72
XP_016857793 (OMIM: 609917) PREDICTED: ERI1 exorib ( 219) 1235 242.9 4.7e-64
XP_006710954 (OMIM: 609917) PREDICTED: ERI1 exorib ( 160) 1126 222.2   6e-58
XP_016857794 (OMIM: 609917) PREDICTED: ERI1 exorib ( 160) 1126 222.2   6e-58
NP_001288630 (OMIM: 609917) ERI1 exoribonuclease 3 ( 160) 1126 222.2   6e-58
XP_011542153 (OMIM: 608739) PREDICTED: 3'-5' exori ( 234)  467 97.8 2.4e-20
XP_016869443 (OMIM: 608739) PREDICTED: 3'-5' exori ( 234)  467 97.8 2.4e-20
XP_016869442 (OMIM: 608739) PREDICTED: 3'-5' exori ( 234)  467 97.8 2.4e-20
XP_016869441 (OMIM: 608739) PREDICTED: 3'-5' exori ( 271)  467 97.9 2.6e-20
XP_011542152 (OMIM: 608739) PREDICTED: 3'-5' exori ( 271)  467 97.9 2.6e-20
XP_005272458 (OMIM: 608739) PREDICTED: 3'-5' exori ( 271)  467 97.9 2.6e-20
NP_699163 (OMIM: 608739) 3'-5' exoribonuclease 1 [ ( 349)  467 98.0 3.2e-20
XP_016869439 (OMIM: 608739) PREDICTED: 3'-5' exori ( 402)  467 98.1 3.5e-20
XP_016869440 (OMIM: 608739) PREDICTED: 3'-5' exori ( 402)  467 98.1 3.5e-20
XP_016869438 (OMIM: 608739) PREDICTED: 3'-5' exori ( 402)  467 98.1 3.5e-20
XP_016869444 (OMIM: 608739) PREDICTED: 3'-5' exori ( 226)  391 83.5 4.8e-16
XP_011542151 (OMIM: 608739) PREDICTED: 3'-5' exori ( 289)  392 83.8 5.1e-16
XP_011542150 (OMIM: 608739) PREDICTED: 3'-5' exori ( 304)  391 83.6   6e-16


>>NP_076971 (OMIM: 609917) ERI1 exoribonuclease 3 isofor  (337 aa)
 initn: 2391 init1: 2391 opt: 2391  Z-score: 2448.7  bits: 461.5 E(85289): 1.2e-129
Smith-Waterman score: 2391; 100.0% identity (100.0% similar) in 337 aa overlap (1-337:1-337)

               10        20        30        40        50        60
pF1KE0 MATASPAADGGRGRPWEGGLVSWPPAPPLTLPWTWMGPSWGQHPGHWGFPALTEPSASPA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_076 MATASPAADGGRGRPWEGGLVSWPPAPPLTLPWTWMGPSWGQHPGHWGFPALTEPSASPA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 AGLGIFEVRRVLDASGCSMLAPLQTGAARFSSYLLSRARKVLGSHLFSPCGVPEFCSIST
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_076 AGLGIFEVRRVLDASGCSMLAPLQTGAARFSSYLLSRARKVLGSHLFSPCGVPEFCSIST
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 RKLAAHGFGASMAAMVSFPPQRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_076 RKLAAHGFGASMAAMVSFPPQRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEI
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE0 ESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_076 ESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKS
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE0 IFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_076 IFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSL
              250       260       270       280       290       300

              310       320       330       
pF1KE0 QHIGRPHSGIDDCKNIANIMKTLAYRGFIFKQTSKPF
       :::::::::::::::::::::::::::::::::::::
NP_076 QHIGRPHSGIDDCKNIANIMKTLAYRGFIFKQTSKPF
              310       320       330       

>>XP_016857790 (OMIM: 609917) PREDICTED: ERI1 exoribonuc  (335 aa)
 initn: 2367 init1: 1842 opt: 2367  Z-score: 2424.2  bits: 456.9 E(85289): 2.7e-128
Smith-Waterman score: 2367; 99.4% identity (99.4% similar) in 337 aa overlap (1-337:1-335)

               10        20        30        40        50        60
pF1KE0 MATASPAADGGRGRPWEGGLVSWPPAPPLTLPWTWMGPSWGQHPGHWGFPALTEPSASPA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MATASPAADGGRGRPWEGGLVSWPPAPPLTLPWTWMGPSWGQHPGHWGFPALTEPSASPA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 AGLGIFEVRRVLDASGCSMLAPLQTGAARFSSYLLSRARKVLGSHLFSPCGVPEFCSIST
       ::::::::::  ::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AGLGIFEVRR--DASGCSMLAPLQTGAARFSSYLLSRARKVLGSHLFSPCGVPEFCSIST
               70          80        90       100       110        

              130       140       150       160       170       180
pF1KE0 RKLAAHGFGASMAAMVSFPPQRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RKLAAHGFGASMAAMVSFPPQRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEI
      120       130       140       150       160       170        

              190       200       210       220       230       240
pF1KE0 ESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKS
      180       190       200       210       220       230        

              250       260       270       280       290       300
pF1KE0 IFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSL
      240       250       260       270       280       290        

              310       320       330       
pF1KE0 QHIGRPHSGIDDCKNIANIMKTLAYRGFIFKQTSKPF
       :::::::::::::::::::::::::::::::::::::
XP_016 QHIGRPHSGIDDCKNIANIMKTLAYRGFIFKQTSKPF
      300       310       320       330     

>>XP_005271243 (OMIM: 609917) PREDICTED: ERI1 exoribonuc  (286 aa)
 initn: 1967 init1: 1967 opt: 1967  Z-score: 2016.7  bits: 381.3 E(85289): 1.4e-105
Smith-Waterman score: 1967; 100.0% identity (100.0% similar) in 277 aa overlap (1-277:1-277)

               10        20        30        40        50        60
pF1KE0 MATASPAADGGRGRPWEGGLVSWPPAPPLTLPWTWMGPSWGQHPGHWGFPALTEPSASPA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MATASPAADGGRGRPWEGGLVSWPPAPPLTLPWTWMGPSWGQHPGHWGFPALTEPSASPA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 AGLGIFEVRRVLDASGCSMLAPLQTGAARFSSYLLSRARKVLGSHLFSPCGVPEFCSIST
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AGLGIFEVRRVLDASGCSMLAPLQTGAARFSSYLLSRARKVLGSHLFSPCGVPEFCSIST
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 RKLAAHGFGASMAAMVSFPPQRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RKLAAHGFGASMAAMVSFPPQRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEI
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE0 ESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKS
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE0 IFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSL
       :::::::::::::::::::::::::::::::::::::                       
XP_005 IFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKTTARTLPTS              
              250       260       270       280                    

              310       320       330       
pF1KE0 QHIGRPHSGIDDCKNIANIMKTLAYRGFIFKQTSKPF

>>NP_001288627 (OMIM: 609917) ERI1 exoribonuclease 3 iso  (259 aa)
 initn: 1798 init1: 1798 opt: 1798  Z-score: 1844.8  bits: 349.3 E(85289): 5.1e-96
Smith-Waterman score: 1798; 100.0% identity (100.0% similar) in 259 aa overlap (79-337:1-259)

       50        60        70        80        90       100        
pF1KE0 FPALTEPSASPAAGLGIFEVRRVLDASGCSMLAPLQTGAARFSSYLLSRARKVLGSHLFS
                                     ::::::::::::::::::::::::::::::
NP_001                               MLAPLQTGAARFSSYLLSRARKVLGSHLFS
                                             10        20        30

      110       120       130       140       150       160        
pF1KE0 PCGVPEFCSISTRKLAAHGFGASMAAMVSFPPQRYHYFLVLDFEATCDKPQIHPQEIIEF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PCGVPEFCSISTRKLAAHGFGASMAAMVSFPPQRYHYFLVLDFEATCDKPQIHPQEIIEF
               40        50        60        70        80        90

      170       180       190       200       210       220        
pF1KE0 PILKLNGRTMEIESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PILKLNGRTMEIESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWM
              100       110       120       130       140       150

      230       240       250       260       270       280        
pF1KE0 AKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKAYSFAMGCWPK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKAYSFAMGCWPK
              160       170       180       190       200       210

      290       300       310       320       330       
pF1KE0 NGLLDMNKGLSLQHIGRPHSGIDDCKNIANIMKTLAYRGFIFKQTSKPF
       :::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NGLLDMNKGLSLQHIGRPHSGIDDCKNIANIMKTLAYRGFIFKQTSKPF
              220       230       240       250         

>>NP_001288628 (OMIM: 609917) ERI1 exoribonuclease 3 iso  (259 aa)
 initn: 1798 init1: 1798 opt: 1798  Z-score: 1844.8  bits: 349.3 E(85289): 5.1e-96
Smith-Waterman score: 1798; 100.0% identity (100.0% similar) in 259 aa overlap (79-337:1-259)

       50        60        70        80        90       100        
pF1KE0 FPALTEPSASPAAGLGIFEVRRVLDASGCSMLAPLQTGAARFSSYLLSRARKVLGSHLFS
                                     ::::::::::::::::::::::::::::::
NP_001                               MLAPLQTGAARFSSYLLSRARKVLGSHLFS
                                             10        20        30

      110       120       130       140       150       160        
pF1KE0 PCGVPEFCSISTRKLAAHGFGASMAAMVSFPPQRYHYFLVLDFEATCDKPQIHPQEIIEF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PCGVPEFCSISTRKLAAHGFGASMAAMVSFPPQRYHYFLVLDFEATCDKPQIHPQEIIEF
               40        50        60        70        80        90

      170       180       190       200       210       220        
pF1KE0 PILKLNGRTMEIESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PILKLNGRTMEIESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWM
              100       110       120       130       140       150

      230       240       250       260       270       280        
pF1KE0 AKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKAYSFAMGCWPK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKAYSFAMGCWPK
              160       170       180       190       200       210

      290       300       310       320       330       
pF1KE0 NGLLDMNKGLSLQHIGRPHSGIDDCKNIANIMKTLAYRGFIFKQTSKPF
       :::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NGLLDMNKGLSLQHIGRPHSGIDDCKNIANIMKTLAYRGFIFKQTSKPF
              220       230       240       250         

>>XP_016857792 (OMIM: 609917) PREDICTED: ERI1 exoribonuc  (259 aa)
 initn: 1798 init1: 1798 opt: 1798  Z-score: 1844.8  bits: 349.3 E(85289): 5.1e-96
Smith-Waterman score: 1798; 100.0% identity (100.0% similar) in 259 aa overlap (79-337:1-259)

       50        60        70        80        90       100        
pF1KE0 FPALTEPSASPAAGLGIFEVRRVLDASGCSMLAPLQTGAARFSSYLLSRARKVLGSHLFS
                                     ::::::::::::::::::::::::::::::
XP_016                               MLAPLQTGAARFSSYLLSRARKVLGSHLFS
                                             10        20        30

      110       120       130       140       150       160        
pF1KE0 PCGVPEFCSISTRKLAAHGFGASMAAMVSFPPQRYHYFLVLDFEATCDKPQIHPQEIIEF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PCGVPEFCSISTRKLAAHGFGASMAAMVSFPPQRYHYFLVLDFEATCDKPQIHPQEIIEF
               40        50        60        70        80        90

      170       180       190       200       210       220        
pF1KE0 PILKLNGRTMEIESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PILKLNGRTMEIESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWM
              100       110       120       130       140       150

      230       240       250       260       270       280        
pF1KE0 AKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKAYSFAMGCWPK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKAYSFAMGCWPK
              160       170       180       190       200       210

      290       300       310       320       330       
pF1KE0 NGLLDMNKGLSLQHIGRPHSGIDDCKNIANIMKTLAYRGFIFKQTSKPF
       :::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NGLLDMNKGLSLQHIGRPHSGIDDCKNIANIMKTLAYRGFIFKQTSKPF
              220       230       240       250         

>>NP_001288629 (OMIM: 609917) ERI1 exoribonuclease 3 iso  (208 aa)
 initn: 1374 init1: 1374 opt: 1374  Z-score: 1413.1  bits: 269.1 E(85289): 5.7e-72
Smith-Waterman score: 1374; 100.0% identity (100.0% similar) in 199 aa overlap (79-277:1-199)

       50        60        70        80        90       100        
pF1KE0 FPALTEPSASPAAGLGIFEVRRVLDASGCSMLAPLQTGAARFSSYLLSRARKVLGSHLFS
                                     ::::::::::::::::::::::::::::::
NP_001                               MLAPLQTGAARFSSYLLSRARKVLGSHLFS
                                             10        20        30

      110       120       130       140       150       160        
pF1KE0 PCGVPEFCSISTRKLAAHGFGASMAAMVSFPPQRYHYFLVLDFEATCDKPQIHPQEIIEF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PCGVPEFCSISTRKLAAHGFGASMAAMVSFPPQRYHYFLVLDFEATCDKPQIHPQEIIEF
               40        50        60        70        80        90

      170       180       190       200       210       220        
pF1KE0 PILKLNGRTMEIESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PILKLNGRTMEIESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWM
              100       110       120       130       140       150

      230       240       250       260       270       280        
pF1KE0 AKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKAYSFAMGCWPK
       :::::::::::::::::::::::::::::::::::::::::::::::::           
NP_001 AKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKTTARTLPTS  
              160       170       180       190       200          

      290       300       310       320       330       
pF1KE0 NGLLDMNKGLSLQHIGRPHSGIDDCKNIANIMKTLAYRGFIFKQTSKPF

>>XP_016857791 (OMIM: 609917) PREDICTED: ERI1 exoribonuc  (208 aa)
 initn: 1374 init1: 1374 opt: 1374  Z-score: 1413.1  bits: 269.1 E(85289): 5.7e-72
Smith-Waterman score: 1374; 100.0% identity (100.0% similar) in 199 aa overlap (79-277:1-199)

       50        60        70        80        90       100        
pF1KE0 FPALTEPSASPAAGLGIFEVRRVLDASGCSMLAPLQTGAARFSSYLLSRARKVLGSHLFS
                                     ::::::::::::::::::::::::::::::
XP_016                               MLAPLQTGAARFSSYLLSRARKVLGSHLFS
                                             10        20        30

      110       120       130       140       150       160        
pF1KE0 PCGVPEFCSISTRKLAAHGFGASMAAMVSFPPQRYHYFLVLDFEATCDKPQIHPQEIIEF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PCGVPEFCSISTRKLAAHGFGASMAAMVSFPPQRYHYFLVLDFEATCDKPQIHPQEIIEF
               40        50        60        70        80        90

      170       180       190       200       210       220        
pF1KE0 PILKLNGRTMEIESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PILKLNGRTMEIESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWM
              100       110       120       130       140       150

      230       240       250       260       270       280        
pF1KE0 AKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKAYSFAMGCWPK
       :::::::::::::::::::::::::::::::::::::::::::::::::           
XP_016 AKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKTTARTLPTS  
              160       170       180       190       200          

      290       300       310       320       330       
pF1KE0 NGLLDMNKGLSLQHIGRPHSGIDDCKNIANIMKTLAYRGFIFKQTSKPF

>>XP_016857793 (OMIM: 609917) PREDICTED: ERI1 exoribonuc  (219 aa)
 initn: 1232 init1: 1232 opt: 1235  Z-score: 1270.9  bits: 242.9 E(85289): 4.7e-64
Smith-Waterman score: 1331; 65.0% identity (65.0% similar) in 337 aa overlap (1-337:1-219)

               10        20        30        40        50        60
pF1KE0 MATASPAADGGRGRPWEGGLVSWPPAPPLTLPWTWMGPSWGQHPGHWGFPALTEPSASPA
       :::::::::::::::::::::::::::::::::::::::::::::               
XP_016 MATASPAADGGRGRPWEGGLVSWPPAPPLTLPWTWMGPSWGQHPG---------------
               10        20        30        40                    

               70        80        90       100       110       120
pF1KE0 AGLGIFEVRRVLDASGCSMLAPLQTGAARFSSYLLSRARKVLGSHLFSPCGVPEFCSIST
                                                                   
XP_016 ------------------------------------------------------------
                                                                   

              130       140       150       160       170       180
pF1KE0 RKLAAHGFGASMAAMVSFPPQRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEI
                                                  :::::::::::::::::
XP_016 -------------------------------------------EIIEFPILKLNGRTMEI
                                                     50        60  

              190       200       210       220       230       240
pF1KE0 ESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKS
             70        80        90       100       110       120  

              250       260       270       280       290       300
pF1KE0 IFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSL
            130       140       150       160       170       180  

              310       320       330       
pF1KE0 QHIGRPHSGIDDCKNIANIMKTLAYRGFIFKQTSKPF
       :::::::::::::::::::::::::::::::::::::
XP_016 QHIGRPHSGIDDCKNIANIMKTLAYRGFIFKQTSKPF
            190       200       210         

>>XP_006710954 (OMIM: 609917) PREDICTED: ERI1 exoribonuc  (160 aa)
 initn: 1126 init1: 1126 opt: 1126  Z-score: 1161.4  bits: 222.2 E(85289): 6e-58
Smith-Waterman score: 1126; 100.0% identity (100.0% similar) in 160 aa overlap (178-337:1-160)

       150       160       170       180       190       200       
pF1KE0 VLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCTELTGII
                                     ::::::::::::::::::::::::::::::
XP_006                               MEIESTFHMYVQPVVHPQLTPFCTELTGII
                                             10        20        30

       210       220       230       240       250       260       
pF1KE0 QAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYLGLPVAD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYLGLPVAD
               40        50        60        70        80        90

       270       280       290       300       310       320       
pF1KE0 YFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHIGRPHSGIDDCKNIANIMKTLAYRG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 YFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHIGRPHSGIDDCKNIANIMKTLAYRG
              100       110       120       130       140       150

       330       
pF1KE0 FIFKQTSKPF
       ::::::::::
XP_006 FIFKQTSKPF
              160




337 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 17:45:21 2016 done: Thu Nov  3 17:45:22 2016
 Total Scan time:  7.700 Total Display time:  0.020

Function used was FASTA [36.3.4 Apr, 2011]
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