GENSCAN 1.0	Date run:  3-Nov-116	Time: 19:15:55

Sequence gi568815592f:24257640_24457891 : 200252 bp : 40.33% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.08 Intr -    628    416  213  2  0   48   55   143 0.000   4.76
 1.07 Intr -  20572  20410  163  1  1   53  103   161 0.906  12.73
 1.06 Intr -  31267  31213   55  0  1   68   84    32 0.321  -1.14
 1.05 Intr -  33439  33293  147  0  0   62  106   169 0.551  14.53
 1.04 Intr -  44153  44058   96  1  0  113   89    34 0.279   4.21
 1.03 Intr -  44405  44329   77  2  2   73   89    33 0.654  -0.71
 1.02 Intr -  45036  44952   85  2  1   61   69    81 0.441   2.40
 1.01 Init -  45537  45482   56  0  2   73   80    86 0.500   7.11
 1.00 Prom -  47860  47821   40                              -3.25

 2.00 Prom +  48087  48126   40                              -8.15
 2.01 Init +  48531  48593   63  2  0   78  115    62 0.975   9.10
 2.02 Intr +  58186  58249   64  0  1   21  105    67 0.044  -0.93
 2.03 Intr +  64872  64899   28  1  1  129   80     9 0.086   0.46
 2.04 Intr +  67429  67695  267  1  0   53  101    73 0.107   0.82
 2.05 Intr +  77172  77326  155  0  2   96   46   143 0.486   9.69
 2.06 Term +  81573  81784  212  1  2   89   38    68 0.106  -1.63
 2.07 PlyA +  82368  82373    6                               1.05

 3.07 PlyA -  83611  83606    6                               1.05
 3.06 Term -  84890  84705  186  2  0   25   34   184 0.304   3.21
 3.05 Intr -  87903  87762  142  2  1   24   82    85 0.103   0.93
 3.04 Intr - 100208  99819  390  1  0   80   89   393 0.366  31.51
 3.03 Intr - 100418 100231  188  2  2   38   14   200 0.134   5.17
 3.02 Intr - 102890 102774  117  2  0  101   61    25 0.084   0.84
 3.01 Init - 127044 126802  243  0  0   78  101    59 0.227   3.98
 3.00 Prom - 127168 127129   40                              -3.65

 4.00 Prom + 131095 131134   40                              -5.75
 4.01 Init + 145408 145597  190  0  1   92   84   216 0.978  18.82
 4.02 Intr + 151822 151934  113  2  2   90   83    20 0.296   0.88
 4.03 Intr + 154583 154756  174  1  0   76  106    89 0.967   8.71
 4.04 Intr + 155397 155554  158  2  2   44   94    74 0.503   1.49
 4.05 Intr + 158758 158874  117  1  0   67   89   106 0.980   7.26
 4.06 Intr + 160445 160597  153  2  0   24  110   127 0.965   6.77
 4.07 Intr + 160822 160939  118  1  1   91   78    59 0.877   4.75
 4.08 Term + 170768 170833   66  1  0  107   54    28 0.005  -1.74
 4.09 PlyA + 170960 170965    6                              -0.45

 5.12 PlyA - 172546 172541    6                               1.05
 5.11 Term - 172788 172627  162  0  0   14   38   179 0.289   2.45
 5.10 Intr - 179097 178937  161  1  2   97  115   154 0.999  17.79
 5.09 Intr - 179650 179474  177  2  0   69   82   219 0.735  18.37
 5.08 Intr - 188000 187907   94  2  1   82   90    69 0.872   5.12
 5.07 Intr - 188192 188087  106  1  1   74   86    82 0.996   5.90
 5.06 Intr - 189340 189199  142  2  1   14   94   149 0.998   6.59
 5.05 Intr - 190394 190238  157  2  1   93   67   136 0.985  10.66
 5.04 Intr - 190569 190495   75  0  0   93   91    35 0.893   3.09
 5.03 Intr - 191699 191508  192  2  0   94    4   133 0.737   4.27
 5.02 Intr - 192318 192150  169  2  1   40   78   211 0.578  14.33
 5.01 Init - 196533 196376  158  0  2   82   94   146 0.490  12.03

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:24257640_24457891|GENSCAN_predicted_peptide_1|298_aa
MAAVLESGHKVKGKIKGTSSWDPGSKKRGKGDHIYPVARAAGIEGAGVKPVIHSRINVSA
RFRKPLQEPCTILKTLNQWDHVLQMVTEKITLRSGAVHRYVKTILLYTLEGKLVESGAEL
ENGQFYVAVGRDKFKKLPYSELLFDKSTMRRPFGQKASSLPPIVGSRKSKGSGNDRHSKS
TVGSSDNSSPQPLKRKGKKEDVNSEKLTKLKQNVKLKNSQETIPNSASSSNPLGSTCTLW
KGFSFALHNKSCCCSLFGSAPPLGAVILTVKVSGVIFEVSETTNPPEGTHSEHTTSGX

>gi568815592f:24257640_24457891|GENSCAN_predicted_CDS_1|894_bp
atggcagctgtacttgagagcggccataaggtcaaggggaaaattaaaggcaccagcagc
tgggaccctggaagcaaaaagagaggcaaaggtgatcacatctacccagtggcaagggct
gcgggaattgagggtgctggcgtaaaaccagtaatccatagcaggatcaacgtgtcagct
cgctttagaaaaccgcttcaggagccgtgcactatcttaaaaaccttgaatcagtgggat
catgtactacaaatggtcacagaaaaaatcactctgaggagcggggctgttcacaggtat
gtcaaaacaatcttgctttatactttagaaggaaaacttgttgagagtggagcagagttg
gagaatgggcagttttatgtggctgttggcagagataagtttaagaaactgccttacagt
gagttactttttgacaagtcaacgatgagaaggccttttggtcagaaagcttcttcacta
cctcctattgtaggatccagaaagtctaaagggagtggaaatgatcgccactctaagtca
acagttggatccagtgacaactcatctcctcagcccctgaagaggaaagggaaaaaagaa
gacgtgaattcagaaaaactgacgaaattgaaacaaaatgtaaaattaaagaattcacaa
gaaaccattccaaatagtgccagcagcagcaacccacttgggtccacttgcacgctgtgg
aagggtttttcttttgctcttcacaataaatcttgctgctgctccctctttgggtccgca
ccacctttaggagctgtaatactcactgtgaaggtcagtggcgtcatttttgaagtcagc
gagaccacgaacccacccgaaggaacccactctgaacacactacttcaggagnn

>gi568815592f:24257640_24457891|GENSCAN_predicted_peptide_2|262_aa
MEFTGEQTDQRVICDYETNQMLPHGEETAESKNGSKETKKEADPGDNQLRARECLGIRGS
LKRPSPLRIIQNQNLQSPVVKTKTFHLGVREHDIYFLTLLLGSQIKALTYICHLYSVIRF
YVTANKQIMRSSGRKENQHGIPDMLVEDAAFETGFLVSVMYQDPGVAKGEKQHLFSRDKA
GRAVTRGRHSKHGHNVYIISSRKLLRIPLAYGSHPSSSLCRLYPPTQHTSDSLRTAPSSP
LHSQLQESLPCLIYSPLQIQLT

>gi568815592f:24257640_24457891|GENSCAN_predicted_CDS_2|789_bp
atggagttcactggtgagcagactgaccagcgtgtaatctgtgactacgaaaccaatcaa
atgctgccacatggagaagagactgcagaaagcaagaatggaagcaaggagaccaaaaag
gaggctgatccaggagataatcaactaagagccagagaatgccttggaatcagaggttcc
ctgaagagaccctctcctcttagaataatccaaaaccagaatctccagagccccgtggtc
aaaactaaaacgttccatctaggagtgagagagcacgatatctacttcctcacacttctc
ctcggttctcaaataaaagcgctcacttacatttgccatctttattctgtgatccgtttt
tatgttacagcaaataagcaaattatgaggtcctctgggcgaaaggaaaatcagcatgga
ataccagacatgctggtggaagatgctgcatttgaaacgggctttctggtttcagtgatg
tatcaggatcctggggtggcaaaaggagaaaaacagcacttattctccagagacaaagca
ggcagagcagtcacaagagggcggcacagcaaacatggtcacaacgtatatatcatttct
tccaggaagcttctgaggattcccctggcttatggtagccatccttccagcagcctgtgc
cgcctgtatcctcccacacagcacacttcggatagcttgcgtacggccccatcttctcca
ctacacagccagcttcaggaaagcttgccttgtctgatatattcaccattgcaaatccaa
ctaacataa

>gi568815592f:24257640_24457891|GENSCAN_predicted_peptide_3|421_aa
MEYYAAIKKDEFMSFAGTWMKLKTIILSKLTQEQKTKHHVFSLISGSRTVRTHGHREGNI
THWGLSGWECRGGMALGEIPNTELTIYTNSTDVGSWTASQTFSLLAAVKKSFPWRKAWHR
KLSTLILPVAGEPGVVRALRVLIGCARHGEKLERLLRVLQAPSVSSGWTPRRTAVTSLSP
VDSRRSRALGAVRPLGQRRCLPTRSSELRRRPAGKMSGSSARSSHLSQPVVKSVLVYRNG
DPFYAGRRVVIHEKKVSSFEVFLKEVTGGVQAPFGAVRNIYTPRTGHRIRKLDQIQSGGN
YVAGGQEAFKKLKENVDQPCFFLVGWRILEVPGEEERKEESETAKLCLAEKFVGTRVVLQ
VFGVRAFLWKPRRSAAQLPHSTEKWLVQEDCRSDWQQSVLTPPVLISCFREFFHANKHAM
L

>gi568815592f:24257640_24457891|GENSCAN_predicted_CDS_3|1266_bp
atggaatactatgcagccataaaaaaggatgagttcatgtcctttgcagggacatggatg
aagctgaaaaccatcattctcagcaaactaacacaggaacagaaaaccaaacaccacgtg
ttttcacttataagtgggagtcgaacagtgagaacacatggacacagggagggaaacatc
acacactggggcctgtcggggtgggagtgtagaggagggatggcattaggagaaatacct
aatacagagctaacaatctacacaaatagcacagatgtgggctcttggacagccagtcag
acatttagccttcttgcggcagtgaaaaaatcctttccctggcgtaaagcttggcacagg
aagctgtccaccttgattctgcccgtagcaggtgaacctggtgtggtgcgcgcactgcgg
gtcctgattggctgtgcacgccacggtgaaaaacttgagcgtctactccgagtcctgcaa
gctcctagtgtctcctctgggtggacgcctaggcgcacggccgttacttctctttcacct
gtggattcgaggcgatcccgcgccctgggtgcggtgaggccgctgggacagcggaggtgc
ctcccgacgcgaagcagcgagctgaggcggcggccagcggggaagatgagcggcagcagc
gccaggtccagccacctgtctcagcccgtcgtgaagagcgtgcttgtgtaccgcaacggg
gaccccttctacgcggggcgccgcgtcgtcatccatgagaagaaggtgtccagcttcgaa
gtcttcctgaaggaggtgaccggcggcgttcaggcaccctttggggccgtcaggaacatc
tacaccccgcggactggccaccgaatccggaagctagaccagatccagagcgggggcaat
tacgtggctggaggccaggaagccttcaagaaactcaaggagaacgtggatcaaccttgt
ttcttcttagtggggtggagaattttagaagtaccaggagaggaagagagaaaggaagag
agtgaaactgcaaaactttgccttgctgaaaagtttgtgggaacccgggttgtacttcag
gttttcggggtcagagccttcctgtggaagcccagaaggagcgctgcccagctgccacac
tccacggagaagtggctggtgcaagaagactgccggagtgactggcagcagtccgtattg
acacctcctgtcttgatttcctgtttcagagagttcttccatgcaaataaacatgcgatg
ctgtga

>gi568815592f:24257640_24457891|GENSCAN_predicted_peptide_4|362_aa
MECLRSLPCLLPRAMRLPRRTLCALALDVTSVGPPVAACGRRANLIGRSRAAQLCGPDRL
RVAERKKTELYQELGLQARDLRFQHVMSITVRNNRIIMRMEYLKAVITPECLLILDYRNL
NLEQWLFRELPSQLSGEGQLVTYPLPFEFRAIEALLQYWNRWLHFLLGVINEHQLAPASE
MISSGSPVTKQGESRREKEDVNSGKSWAPQAGLSELETDIKIFKESILEILDEEELLEEL
CVSKWSDPQVFEKSSAGIDHAEEMELLLENYYRLADDLSNAARELRVLIDDSQSIIFINL
DSHRNVMMRLNLQLTMGTFSLSLFGLMGVAFGMNLESSLEEAPVCVVSLYVSTCSHLAPT
YK

>gi568815592f:24257640_24457891|GENSCAN_predicted_CDS_4|1089_bp
atggaatgcctgcgcagtttaccctgcctcctgccccgcgcgatgagacttccccggcgg
acgctgtgtgccctggccttggacgtgacctctgtgggtcctcccgttgctgcctgcggc
cgccgagccaacctgattggaaggagccgagcggcgcagctttgcgggcccgaccggctc
cgcgtggcagaaaggaagaaaactgaattataccaagagttaggtcttcaagccagagat
ttgagatttcagcatgtaatgagtatcacagtcagaaacaataggattatcatgagaatg
gagtatttgaaagctgtgataactccagagtgtcttctgatattagattatcgtaattta
aacttagagcaatggctgttccgggaactcccttcacagttgtctggagagggtcaactc
gttacataccctttaccttttgagtttagagctatagaagcactcctgcaatattggaat
agatggctacacttcctgcttggggtaattaatgagcaccagctagcaccagccagtgag
atgataagtagtgggagcccagttaccaagcagggggaaagcagaagagagaaagaagat
gtaaacagtggtaagtcatgggctccacaggctggtctatcagagttagaaacagatatt
aaaattttcaaagagtcaattttggagatcttggatgaggaagagttgctagaagagctc
tgtgtatcaaaatggagtgacccacaagtctttgaaaagagcagtgctgggattgaccat
gcagaagagatggagttgctgttggaaaactactaccgattggctgacgatctctccaat
gcagctcgtgagcttagggtgctgattgatgattcacaaagtattattttcattaatctg
gacagccaccgaaacgtgatgatgaggttgaatctacagctgaccatgggaaccttctct
ctttcgctctttggactaatgggagttgcttttggaatgaatttggaatcttcccttgaa
gaggccccagtgtgtgttgtttccctctatgtgtccacgtgttctcatttagctcccact
tacaagtga

>gi568815592f:24257640_24457891|GENSCAN_predicted_peptide_5|530_aa
MGTVTSWWAHQATAAPATSTSGACTSSTAMTWACHLLTWTWTRRPTGSLKASRSALSEAV
AQPRGSKLVPLQPSGRFGSALAVLDFNVDGVPDLAVGAPSVGSEQLTYKMLPTIAGTTHP
GTMCDCGGRGPSLASCPLQTQLLPLPPHTPFLDMPAVCHVLNSSGCLTLRPLLGAVYVYF
GSKQGGMSSSPNITISCQDIYCNLGWTLLAADVNGDSEPDLVIGSPFAPGGGKQKGIVAA
FYSGPSLSDKEKLNVEAANWTVRGEEDFSWFGYSLHGVTVDNRTLLLVGSPTWKNASRLG
HLLHIRDEKKSLGRVYGYFPPNGQSWFTISGDKAMGKLGTSLSSGHVLMNGTLKQVLLVG
APTYDDVSKVAFLTVTLHQGGATRMYALTSDAQPLLLSTFSGDRRFSRFGGVLHLSDLDD
DGLDEIIMAAPLRIADVTSGLIGGEDGRVYVYNGKETTLGDMTGKCKSWITPCPEEKVGK
YSRPTRPSSLVYDDQEPNEVRQQLQQKSLLVESGKGLQRSWARSCIWKDD

>gi568815592f:24257640_24457891|GENSCAN_predicted_CDS_5|1593_bp
atgggcacggtgacctcgtggtgggcgcaccaggctacagccgccccggccacatccaca
tcgggcgcgtgtacctcatctacggcaatgacctgggcctgccacctgttgacctggacc
tggacaaggaggcccacaggatccttgaaggcttccaggagtgctctttccgaggccgtg
gctcagcccaggggaagtaaacttgtgcctcttcagccctcaggtcggtttggctcggcc
ttggctgtgttggactttaacgtggacggcgtgcctgacctggccgtgggagctccctcg
gtgggctccgagcagctcacctacaaaatgcttcctaccatagcagggaccacgcatccg
ggcaccatgtgtgactgtggaggtcgagggccctcccttgccagctgccctctgcagact
caactcttgccccttcctcctcacactccatttctagacatgccagcagtctgtcacgtc
ctgaactcatcaggctgtctcactttgcgacctttgctcggtgccgtgtatgtctacttt
ggttccaaacaaggaggaatgtcttcttcccctaacatcaccatttcttgccaggacatc
tactgtaacttgggctggactctcttggctgcagatgtgaatggagacagtgaacccgat
ctggtcatcggctccccttttgcaccaggtggagggaagcagaagggaattgtggctgcg
ttttattctggccccagcctgagcgacaaagaaaaactgaacgtggaggcagccaactgg
acggtgagaggcgaggaagacttctcctggtttggatattcccttcacggtgtcactgtg
gacaacagaaccttgctgttggttgggagcccgacctggaagaatgccagcaggctgggc
catttgttacacatccgagatgagaaaaagagccttgggagggtgtatggctacttccca
ccaaacggccaaagctggtttaccatttctggagacaaggcaatggggaaactgggtact
tccctttccagtggccacgtactgatgaatgggactctgaaacaagtgctgctggttgga
gcccctacgtacgatgacgtgtctaaggtggcattcctgaccgtgaccctacaccaaggc
ggagccactcgcatgtacgcactcacatctgacgcgcagcctctgctgctcagcaccttc
agcggagaccgccgcttctcccgatttggtggcgttctgcacttgagtgacctggatgat
gatggcttagatgaaatcatcatggcagcccccctgaggatagcagatgtaacctctgga
ctgattgggggagaagacggccgagtatatgtatataatggcaaagagaccacccttggt
gacatgactggcaaatgcaaatcatggataactccatgtccagaagaaaaggtgggaaaa
tacagcaggcccacaagaccatccagtttggtgtatgatgaccaagagccaaacgaggtc
agacagcaactgcagcagaagtctctgctggtggagtcagggaagggcctgcagagatca
tgggcccggagctgcatctggaaagatgactag