GENSCAN 1.0	Date run:  6-Nov-116	Time: 21:35:16

Sequence gi568815582r:8469776_8689838 : 220063 bp : 46.09% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +  15881  15920   40                              -1.86
 1.01 Init +  21017  21028   12  1  0   89  100     6 0.553   2.15
 1.02 Intr +  21699  21866  168  2  0  109   81    10 0.500   2.54
 1.03 Term +  23042  23155  114  1  0   89   39    67 0.591   0.47
 1.04 PlyA +  24627  24632    6                               1.05

 2.00 Prom +  38133  38172   40                              -4.96
 2.01 Init +  38589  38734  146  2  2   82   80   110 0.647   9.23
 2.02 Intr +  45344  45493  150  2  0   18   63   135 0.305   3.28
 2.03 Intr +  59177  59360  184  2  1   37   76   107 0.009   4.19
 2.04 Term +  75660  75737   78  2  0   61   41   186 0.916   8.96
 2.05 PlyA +  76047  76052    6                               1.05

 3.00 Prom +  80052  80091   40                              -3.06
 3.01 Init +  84923  85040  118  1  1   52   61    99 0.676   3.96
 3.02 Intr +  85293  85339   47  1  2  128   84    27 0.681   4.43
 3.03 Intr +  85428  85447   20  2  2   62  110    17 0.229  -3.29
 3.04 Intr +  87754  87914  161  1  2   33   91    70 0.278   1.43
 3.05 Intr +  87962  88034   73  0  1   42   66   116 0.270   3.26
 3.06 Term +  90869  91040  172  2  1   58   54    75 0.199  -1.60
 3.07 PlyA +  91897  91902    6                               1.05

 4.03 PlyA -  99748  99743    6                               1.05
 4.02 Term - 100230  99998  233  1  2  105   52   343 0.998  29.04
 4.01 Init - 102387 102312   76  0  1   79   92   135 0.953  12.25
 4.00 Prom - 102844 102805   40                              -9.36

 5.00 Prom + 104883 104922   40                              -5.16
 5.01 Init + 104992 105063   72  0  0  103   86    52 0.253   7.57
 5.02 Intr + 109510 109655  146  0  2   32   95    75 0.238   1.68
 5.03 Intr + 119349 119500  152  0  2   97   54    44 0.000   1.71
 5.04 Intr + 119852 120051  200  0  2   85   55   221 0.000  17.57
 5.05 Intr + 121047 121507  461  2  2   32  -54  1179 0.001  90.08
 5.06 Term + 121635 122190  556  0  1   46   50   584 0.995  44.20
 5.07 PlyA + 124089 124094    6                               1.05

 6.00 Prom + 125635 125674   40                              -2.66
 6.01 Init + 126734 126897  164  1  2   57   55    83 0.475   0.26
 6.02 Intr + 131366 131553  188  2  2   63  102   101 0.777   8.33
 6.03 Term + 137704 137804  101  2  2  131   38    24 0.268  -0.01
 6.04 PlyA + 139419 139424    6                               1.05

 7.00 Prom + 142986 143025   40                              -4.46
 7.01 Init + 155891 156023  133  1  1   69  110   187 0.674  19.32
 7.02 Intr + 158955 159335  381  1  0   82   67   153 0.764   7.48
 7.03 Intr + 165264 165304   41  1  2   78   94    64 0.183   3.94
 7.04 Intr + 165393 165537  145  2  1  120   95   179 0.997  21.66
 7.05 Intr + 169316 169387   72  0  0   94   78    65 0.958   5.48
 7.06 Intr + 171356 171409   54  0  0   98   89    66 0.988   6.65
 7.07 Intr + 172352 172432   81  0  0   80  116    72 0.997   8.81
 7.08 Intr + 172688 172790  103  0  1  110   83   143 0.999  15.23
 7.09 Intr + 174782 174950  169  2  1   59   82   306 0.933  27.05
 7.10 Intr + 183233 183380  148  1  1   42   37    67 0.007  -3.19
 7.11 Term + 190972 191141  170  2  2   41   48   404 0.916  29.74
 7.12 PlyA + 191870 191875    6                              -0.45

 8.05 PlyA - 191943 191938    6                               1.05
 8.04 Term - 192879 192837   43  2  1  105   48    30 0.044  -2.67
 8.03 Intr - 193102 193067   36  0  0   62  100    45 0.029   0.48
 8.02 Intr - 196365 196327   39  2  0  114   96     0 0.082   0.74
 8.01 Init - 204880 204744  137  1  2   58   53   154 0.461   6.53
 8.00 Prom - 211536 211497   40                              -2.96


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 120063 119844  220  0  1   72   74   485 0.972  42.29


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815582r:8469776_8689838|GENSCAN_predicted_peptide_1|97_aa
MEMKLLTLRHTRLQESGAQQRSGDWNNLPGNPRIKARQSPQGILGFCSAHLPEERGAYTK
LLVSTPLLLDSFDEHHNDDDDDNLMFISQTYVNTFHA

>gi568815582r:8469776_8689838|GENSCAN_predicted_CDS_1|294_bp
atggagatgaagctcctcactctgagacacactcgcttgcaagagtcaggagcacaacag
aggtcgggagactggaacaatctcccaggtaacccaagaataaaagctcgtcagtctcca
cagggcatcctgggattctgttcagctcacctgccagaagaaagaggtgcctacaccaag
ctactggtttccacccctctattactggattcctttgatgaacaccataatgatgatgat
gatgacaatttaatgttcatatctcaaacatatgtcaacacttttcatgcatga

>gi568815582r:8469776_8689838|GENSCAN_predicted_peptide_2|185_aa
MLATQDVAQRCKELGITALHIKLWATGGNRNKSPRPGAQMSLRAPCLLRSWLDHQYVDSK
EARRSRQGPSCHAVTVERQYILNMQALLDSQSWQDALNRNPWQTLDLVYFMTAEHRTIDF
EGPSCKVGKALSEEGFRESFGEDSKILSILATWKRLQLARKIINIIIIIITIITIIITYC
YQVTF

>gi568815582r:8469776_8689838|GENSCAN_predicted_CDS_2|558_bp
atgctggccacccaggatgtggcccagaggtgcaaggagctgggcatcactgccctacac
atcaaactctgggccacaggaggaaacaggaacaagtcccctagacctggggcccagatg
tccctcagagccccttgcctgctcaggtcatggttagaccaccaatatgttgattcaaag
gaagcacgacggtcacgccaggggccatcatgccacgctgtgactgtggagcgtcaatat
atcctcaacatgcaggcactgctggacagccaaagctggcaggatgccctgaataggaat
ccctggcagactctagatcttgtctatttcatgacagctgagcacaggactattgacttt
gaaggtccttcctgcaaggtgggaaaggcactctcagaagagggctttagagaatcgttc
ggagaggacagcaaaatcctcagcatcttggctacctggaagagattgcagctggctagg
aaaataatcaacatcatcatcatcatcatcaccatcatcaccatcatcatcacctattgc
tatcaagttacattttga

>gi568815582r:8469776_8689838|GENSCAN_predicted_peptide_3|196_aa
MSQIRILKAADTGLALTDEKSCSTYFACCNLCNGHNNPEGLSFTVTFVVFSGFAHVCTTD
AGDHKQYTRVTSFGHYILGNLLGSYEEMYVALKNTGAGQQPWSLFQNQLTQGMNSDNNST
YFTDIVGRLKKIKRHHHLVTLYQSKSSPSVGLRLLSVIQGMRTCLASFQGALTMSGIPHQ
PQRSPPGEGTKVSIGD

>gi568815582r:8469776_8689838|GENSCAN_predicted_CDS_3|591_bp
atgagtcaaataagaatcctaaaagcagctgacactggcttagcactcacagatgagaag
tcctgttctacgtactttgcctgctgtaacttatgcaacggccacaacaaccctgagggt
ctctccttcacagtaacctttgtggttttctctggttttgcccatgtatgcactactgat
gcaggagaccacaagcaatatacaagggtcactagttttggccactacatcttgggtaat
ttattaggcagctacgaagaaatgtatgtggcccttaagaacacaggtgctggtcagcag
ccttggtcccttttccagaaccaacttacccagggcatgaactcagataataacagcacc
tacttcacagacatcgtgggaagactgaagaagataaagcgccatcatcatctggtaacc
ctctaccagagcaagtcttctccttctgtgggcctcaggctcctgtctgtcattcagggc
atgagaacatgcttggcaagtttccagggggccctcactatgtctgggatcccccatcag
ccccaacgttcacctccaggagaaggcaccaaagtcagcattggggactga

>gi568815582r:8469776_8689838|GENSCAN_predicted_peptide_4|102_aa
MTGFLSFLLQAYLLLLLTGILFLFGAMVTLAGISVYIAYSAAAFREALCLLEEKALLDQV
DISFGWSLALGWISFIAELLTGAAFLAAARELSLRRRQDQAI

>gi568815582r:8469776_8689838|GENSCAN_predicted_CDS_4|309_bp
atgacggggtttctgagcttcctcctccaagcctacctcctcctcctgctcactggaatt
ctcttcctctttggagccatggtgaccctcgctgggatcagcgtctacatagcgtattca
gccgccgccttccgggaggcgctgtgtctcttggaggagaaggccctcctggaccaggtg
gacatcagcttcggctggtccctggccctgggctggatcagcttcatcgccgagctgctc
accggggcagccttcctggcagcagcccgcgagctcagcctgagacggaggcaggaccag
gccatatga

>gi568815582r:8469776_8689838|GENSCAN_predicted_peptide_5|528_aa
MAAPCEFPSRAASCLDVHIRLNAWEHQKLWQKKKVPGSTYYKEEISPPLFPNLVSVTLRL
LEELRAMQPCYAWPRSPAVLGKAPELTARTGALPPSSPSPDSLRSCRLDSLTVTFSSLKG
FISGPPEAGVGAQRLGLAAIDGPQQVLRPRASPLQPLGVNDIPEVRADGGRQEHKAERPG
QRSRAGQPAQSFFIIIATSIATIITTTTITIINITTNNNTIITTITIIITTITSSSITNS
TTITIIIITNNNTVITTITIIIITTIITSSSITNTTTITIIIITTTTITITTDNTTITTI
TIITTNTAIITTITTSSSPPSPPPPPPSPPSPPPPSSLSPPLPSQHHHHHHHHHHHHHHH
HHHHHHHHHHYHHHCHRHHHHHHHHHHHQPPPSPPTITTTIITTITIIITTIITTITTIT
TIIITTIITTITTITTTVITITTTMTITIIITTTTSTSTTLLFIITITLINSTIFFTTIK
PFTPSRNTSGTFYVSDAIVYVKNIGMNNPKTSPALKKYRIQASQTFTK

>gi568815582r:8469776_8689838|GENSCAN_predicted_CDS_5|1587_bp
atggcagccccatgtgagtttcccagtcgtgctgcaagctgccttgatgtccacattcga
ttaaacgcctgggaacatcaaaagctctggcaaaagaagaaggtcccaggatccacttac
tacaaggaagaaatttcaccacctttatttcctaaccttgtcagtgtgactttgagactt
ctggaagagctcagagctatgcagccctgttatgcctggccccgaagcccggctgttttg
ggaaaggctccagaactcacggctaggaccggggcgctccctccatcctcaccctccccg
gactcactgagaagttgccggctcgattcgctgactgtcacgttctccagcctgaagggg
ttcatcagcggtccgccagaggccggagtgggagctcagaggctcgggctggctgcgatt
gatggaccccagcaggtcctgcgcccccgggccagtcctctccagccgctcggtgtcaat
gatataccagaagtccgtgccgatggcggccgccaggagcacaaagctgagcgccccggt
cagcgcagccgcgccggccagcccgcccagtctttcttcattatcatagccaccagcatt
gccaccatcatcaccaccaccaccatcaccatcatcaacatcaccaccaacaacaacaca
atcatcactaccatcaccatcatcatcaccaccatcaccagcagcagcatcaccaacagc
accaccatcaccatcatcatcatcaccaacaacaacaccgtcatcactaccatcaccatc
atcatcatcaccaccatcatcaccagcagcagcatcaccaacaccaccaccatcaccatc
atcatcatcaccaccaccaccatcaccatcaccacggacaacaccaccatcaccaccatc
accatcatcaccaccaacaccgccatcatcactaccatcaccacatcatcttcaccacca
tcaccaccaccaccaccaccatcaccaccatcaccaccaccaccatcatcgctatcacca
ccattgccatcacaacaccaccatcaccaccatcaccaccaccaccaccatcaccaccat
caccaccatcaccaccaccaccatcatcactatcaccaccattgccatcgtcatcaccat
catcatcaccaccaccatcaccaccaaccaccaccatcaccaccaaccattaccaccacc
atcatcaccaccatcaccatcatcatcaccaccatcatcaccaccattaccactatcacc
accatcatcatcaccaccatcatcaccaccattaccactatcaccaccacggtcattacc
atcaccaccaccatgaccatcaccatcatcatcactaccaccaccagcaccagcaccact
ctcctctttatcatcaccatcactcttatcaattccaccatcttcttcaccaccataaaa
ccttttactccttcaagaaatacttccggtaccttctatgtgtctgatgctatagtctat
gttaagaatataggcatgaacaatccaaaaacaagtcctgcccttaagaaatataggatt
caggcttcccagacttttacaaagtag

>gi568815582r:8469776_8689838|GENSCAN_predicted_peptide_6|150_aa
MLGQFQTPPLTGLGASIFNLLEVGNHIRMEIPGDHPSVRSPGHEERLEDEMPESGIVGFM
KDDGCNQCLTHSRHSRLVSGAVVMTITVVNPNIVIAPSSSSPSFLSSSHPVPSCSGLQLS
SVALSAHIFPDEKEKVENFVFVQAALFACG

>gi568815582r:8469776_8689838|GENSCAN_predicted_CDS_6|453_bp
atgctgggccagttccagacaccacccttaactggcctgggagcctccattttcaatctc
ttggaagttggcaaccatataaggatggaaattcctggagaccacccttctgtgagaagc
ccaggccatgaggaaaggctggaggatgagatgccagagagtgggattgttgggttcatg
aaagatgatggctgcaaccagtgtctgacacatagcaggcattcacgtctagtaagtggt
gctgttgtgatgactatcactgttgtcaaccccaatattgtcattgcaccatcatcatcg
tcaccttcattcctgagctcctctcatcctgttccctcttgttcaggcctacagctcagc
agcgttgctctgtctgcacacattttcccagatgagaaagaaaaagtcgaaaattttgtt
ttcgtacaagctgccctttttgcctgtggctaa

>gi568815582r:8469776_8689838|GENSCAN_predicted_peptide_7|498_aa
MVQLAPAAAMDEVTFRSDTVLSDVHLYTPNHRHLMVRLNSVGQPVFLSQFKLLWSQDSWT
DSGAKGGSHRDVHTKEPPSAETGSTGSPPGSGHGNEGFSLQAGTDTTGQEVAEAQLDEDG
DLDVVRRPRAASDSNPAGPLRDKVHPMILAQEEDDVLGEEAQGSPHDIIRIEHTMATPLE
DVGKQVWRGALLLADYILFRQDLFRGCTALELGAGTGLASIIAATMARTVYCTDVGADLL
SMCQRNIALNSHLAATGGGIVRVKELDWLKDDLCTDPKVPFSWSQEEISDLYDHTTILFA
AEVFYDDDLTDAVFKTLSRLAHRLKNACTAILSVEKRLNFTLRHLDVTCEAYDHFRSCLH
ALEQLADGKLRFVVEPVEASFPQLLVYERLQQLVTASSNPLLLLNQCMRRANGGAADIGS
RQWIPASTREAFQTVLFLTWQCGGEIGPASGQVLEEEEEEEEEEEEEEEEGEEGEEGEEE
EEEEEEEEEEEEEEEELC

>gi568815582r:8469776_8689838|GENSCAN_predicted_CDS_7|1497_bp
atggtacagctggctcctgcggcagccatggacgaggtcacctttaggagcgacactgtg
ctgtcagatgtccacctctataccccgaaccatagacatctcatggtacggctgaacagc
gtggggcagccagttttcctgtcccaattcaagcttctatggagccaagactcttggaca
gattcaggagccaagggtggcagtcacagagatgttcacacaaaggagcctccttctgct
gagacaggcagcacagggtcccctccaggaagtggccatggtaatgagggtttctccctc
caggccgggactgacaccactggccaggaagtggctgaagctcagctggatgaggatggg
gatttggacgtggtgagaagaccacgagccgcctctgattccaacccagcagggcctctg
agagacaaggtacatcccatgattctagcacaggaagaagacgacgtcctgggagaggaa
gcacaaggcagcccgcacgatatcatcagaatagagcacaccatggccacgcccctggag
gatgttggcaagcaggtgtggcggggcgccctgctcctggcagactacatcctgttccga
caggacctcttccgaggatgtacagcgctggagctcggggccggcacggggctcgctagc
atcatcgcagccaccatggcacggaccgtttattgtacagatgtcggtgcagatctcttg
tccatgtgccagcgaaacattgccctcaacagccacctggctgccactggaggtggtata
gttagggtcaaagaactggactggctgaaggacgacctctgcacagatcccaaggtcccc
ttcagttggtcacaagaggaaatttctgacttgtacgatcacaccaccatcctgtttgca
gccgaagtgttttacgacgacgacttgactgatgctgtgtttaaaacgctctcccgactc
gcccacagattgaaaaatgcctgcacagccatactgtcggtggagaagaggctcaacttc
acattgagacacttggacgtcacatgtgaagcctacgatcacttccgctcctgcctgcac
gcgctggagcagctcgcagatggcaagctgcgcttcgtggtggagcccgtggaggcctcc
ttcccacagctcctggtttacgagcgcctccagcaactggtgactgccagttcaaaccca
cttctgctgctcaaccaatgcatgcgccgggcaaacggtggtgctgctgatattggaagc
aggcagtggatcccagcttcaaccagggaggccttccagactgtgctgtttcttacatgg
cagtgtggtggggagattgggccggcaagtgggcaagtcttggaggaggaggaggaggag
gaggaggaggaggaggaggaggaggaggagggggaggagggggaggagggggaggaggaa
gaggaggaggaggaggaagaggaggaggaggaggaggaggaggaggagctgtgctga

>gi568815582r:8469776_8689838|GENSCAN_predicted_peptide_8|84_aa
MRAPSSGSAGCLLDFPQRLAGLPGSAERPGQSAPPAPALAFATANGLSRLSGNQRTPSGC
LTDITKSNFEKTQTISFMLFLGEL

>gi568815582r:8469776_8689838|GENSCAN_predicted_CDS_8|255_bp
atgcgcgccccgagttccggcagcgctgggtgtctgctcgacttcccccagcgactcgcc
ggactccctggctccgccgagcgtcccggccaatcagcgccgccagccccggccctcgct
ttcgccacagccaatgggttgagcagactctcaggcaaccaaagaacaccctcagggtgc
ttgacagacattaccaagtccaactttgagaagacccaaaccatcagcttcatgctcttt
cttggtgagctctga