GENSCAN 1.0	Date run:  6-Nov-116	Time: 21:40:36

Sequence gi568815593r:10581059_10861068 : 280010 bp : 45.25% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -     51     46    6                               1.05
 1.02 Term -   4467   4355  113  1  2   92   49    50 0.625   0.22
 1.01 Init -   8288   8180  109  2  1   65   75   110 0.826   7.78
 1.00 Prom -  22076  22037   40                              -2.06

 2.00 Prom +  23648  23687   40                              -5.56
 2.01 Init +  29684  29755   72  1  0   52   90    42 0.287  -0.13
 2.02 Intr +  37275  37404  130  2  1  147  110   191 0.999  27.47
 2.03 Intr +  54368  54426   59  0  2   42   68    55 0.038  -2.50
 2.04 Intr +  56900  57110  211  1  1  142   91   145 0.668  18.69
 2.05 Intr +  57425  57471   47  0  2   87   86    21 0.579  -0.07
 2.06 Intr +  61555  61669  115  0  1   43   97    57 0.733   2.12
 2.07 Term +  68208  69055  848  1  2  106   55  1207 0.874 112.24
 2.08 PlyA +  69914  69919    6                               1.05

 3.03 PlyA -  70185  70180    6                               1.05
 3.02 Term -  83653  83430  224  2  2    6   41   398 0.821  23.98
 3.01 Init -  86492  86441   52  2  1   56   88    31 0.322   1.22
 3.00 Prom -  87935  87896   40                              -2.66

 4.11 PlyA -  88108  88103    6                               1.05
 4.10 Term -  89301  88810  492  0  0   32   37   822 0.153  66.11
 4.09 Intr -  95634  95410  225  0  0   48  100    91 0.468   4.48
 4.08 Intr -  98556  98421  136  2  1   48   71    46 0.434  -0.53
 4.07 Intr -  98809  98720   90  0  0   74   81    72 0.494   4.21
 4.06 Intr - 100111 100002  110  1  2  111   63    84 0.581   7.28
 4.05 Intr - 100495 100370  126  1  0   91   56    28 0.160   0.78
 4.04 Intr - 102513 102471   43  2  1  119  114    83 0.832  12.24
 4.03 Intr - 118353 118146  208  1  1   40   97    92 0.231   3.44
 4.02 Intr - 132118 131972  147  2  0   91    8    80 0.009   0.51
 4.01 Init - 134876 134747  130  2  1   72  101    34 0.208   3.44
 4.00 Prom - 145120 145081   40                              -2.76

 5.00 Prom + 160576 160615   40                              -0.96
 5.01 Init + 180009 180076   68  2  2   91   46   201 0.639  14.74
 5.02 Intr + 202387 202762  376  1  1  -18   41   254 0.008   5.12
 5.03 Intr + 212272 212399  128  0  2   -1   69   132 0.396   1.88
 5.04 Term + 219885 219993  109  0  1   41   46   122 0.381   1.28
 5.05 PlyA + 220611 220616    6                               1.05

 6.00 Prom + 222960 222999   40                              -6.16
 6.01 Init + 224189 224423  235  1  1   64   22   157 0.708   5.00
 6.02 Intr + 230840 230899   60  0  0  118   66    21 0.256   1.61
 6.03 Intr + 255075 255117   43  1  1  118  107     7 0.478   2.90
 6.04 Intr + 256864 257032  169  1  1   88   37   108 0.525   5.65
 6.05 Term + 257693 257746   54  1  0   93   41    85 0.656   1.86
 6.06 PlyA + 258211 258216    6                               1.05

 7.03 PlyA - 260265 260260    6                               1.05
 7.02 Term - 273610 273543   68  2  2  110   55    74 0.378   4.40
 7.01 Init - 278081 277940  142  2  1   77   89    30 0.310   2.30

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593r:10581059_10861068|GENSCAN_predicted_peptide_1|73_aa
MNQVYYSQVWKEEDSTPGKTKEKRGGAIQDLLLRPAEQAKPHAPQTPSNHMLKLPLSNGN
DCGDSKSDLRRLS

>gi568815593r:10581059_10861068|GENSCAN_predicted_CDS_1|222_bp
atgaatcaagtttactactcacaggtctggaaggaagaggacagcacccctggcaagacc
aaagagaagaggggaggagccatccaggacctgctccttcgaccagcagaacaagcaaag
ccacatgctccacagaccccatctaatcacatgcttaaactccctttgtcaaatggaaat
gactgtggagactcgaagtcagacctaagacgtctaagttaa

>gi568815593r:10581059_10861068|GENSCAN_predicted_peptide_2|493_aa
MLPIKYIAWAQWLTSVIPALWEAETGLIVACYHGFVDTVVALAECPHVDVNWQDSEGNTA
LITAAQAVKDEGEQCGVNESKKHQRLAEGLAGTSTFCGSGNQYTCTLLFTGHAIITNYLL
NYFPGLDLERRNAFGFTALMKAAMQGRTDCIRALMLAERGDPLAVNGKTVLLKEGGMRIG
HVHNRTALGCMLGLEKPSDMLVVIIVIIMIIGADVHARDPRRGMSPQEWATYTGRVDAVR
LMQRLLERPCPEQFWEKYRPELPPPPEAARKPAGSKNCLQRLTDCVLSVLTPRSVRGPED
GGVLDHMVRMTTSLYSPAVAIVCQTVCPESPPSVGKRRLAVQEILAARAARGPQAQEEDE
VGGAGQRGRTGQEDADSREGSPRAGLPPALGSRGPAAPAPRKASLLPLQRLRRRSVRPGV
VVPRVRVSKAPAPTFQPERPARKGSTKDSGHLQIPKWRYKEAKEEKRKAEEAEKKRQAEA
QKERRTAPWKKRT

>gi568815593r:10581059_10861068|GENSCAN_predicted_CDS_2|1482_bp
atgctccctattaaatatatcgcttgggcacagtggctcacgtctgtaatcccggcactt
tgggaggccgagaccggccttattgtcgcctgctaccacggctttgtggataccgtggtg
gccttagcagagtgcccccacgttgacgtcaactggcaggacagcgaggggaacacagcc
ctaatcacagctgcacaggcagtaaaggacgagggagagcaatgtggtgtaaatgagtca
aaaaagcaccagcgactggctgaaggcctggctggaaccagcacattttgtggaagtggg
aaccaatacacgtgtacacttctctttacagggcacgctatcatcactaactacttgttg
aactatttccctggtcttgaccttgaaaggaggaacgcgttcgggttcaccgccctgatg
aaagccgccatgcagggtcgaacggactgcatccgagccctgatgctagcagaaaggggt
gatcccttggctgtaaatggcaagactgtgctgttgaaggaaggtgggatgcggattggg
cacgttcacaacagaacagccctcgggtgcatgctgggcttggagaagccttcggacatg
ttggttgtgattattgttattattatgattattggggcggatgtccacgcgagggacccc
cgccgtgggatgtcgccgcaggagtgggccacttacacgggccgcgtggatgccgtccgt
ctcatgcagaggctgctggagcgcccctgcccggagcagttctgggagaagtaccggccc
gagctgccgccgccccctgaagcggcgcggaagcccgcgggctccaagaactgcctgcag
aggctcacagactgcgtgctgtccgtgctgacgccgcgctccgtgcggggcccggaggac
gggggcgtcctggaccacatggtccggatgaccacgagcctctacagccccgccgtggcc
atcgtgtgccagaccgtgtgccctgagagccctccgagcgtggggaagaggcggctggcg
gtgcaggagatcctggcggcgcgggctgcacggggcccccaggcgcaggaggaggatgag
gtggggggcgcggggcagcgcgggcggaccggacaggaggacgcggactcccgggagggc
tccccgagagccggcctccctcccgccctggggtcccggggccccgcagcgcccgccccg
cggaaggccagcctcctgcccctgcagcgcctgcggcggagaagcgtgcggcccggtgtg
gtggtgccccgggtccgagtcagcaaggcgcccgcgcccaccttccagcccgagcggccg
gcgcggaagggcagcaccaaggacagcggccacctgcagatccccaagtggcggtacaag
gaggccaaggaggagaagaggaaggcagaggaggccgaaaagaagcgccaggccgaggcg
cagaaggagaggcgcactgcgccctggaagaagaggacgtga

>gi568815593r:10581059_10861068|GENSCAN_predicted_peptide_3|91_aa
MDVSGPHGTCYQCSPEPEPPKSTALAAVCQVIGMYDYTAQNDDELAFNKGQIINILNKED
PDWWKGEVNGQVGLFPSNYVKLTTDMDPSQQ

>gi568815593r:10581059_10861068|GENSCAN_predicted_CDS_3|276_bp
atggatgtcagtgggcctcatgggacttgttaccagtgcagcccagagccagagccacct
aagtcaacagcattagcggcagtgtgccaggtgattgggatgtacgactacaccgcgcag
aatgatgatgagctggccttcaacaagggccagatcatcaacatcctcaacaaggaggac
cccgactggtggaaaggagaagtcaatggacaagtggggctcttcccatccaattatgtg
aagttgaccacagacatggacccaagccagcaatga

>gi568815593r:10581059_10861068|GENSCAN_predicted_peptide_4|568_aa
MVYYREVSCQVQFGIIKLIVTCDKLTCKESNKYLSASSLLEFHGIDYGAFGLGRLPVEFI
LRGHVKYQSDVNRDKDVRQIGWLVGWLVGRLVASYTVCEHQMPVSGEEEEDDSDKKRRQA
PMSLQQLDRQEKVGDAPEIVQMLPYFQACLILINTVDRQTDSPPKPTVFISGVIARGHWW
VLAWGFLTHKHHASCRDVDGRWPGRSSHTTAMLPAGTLGDKDFPPAAAQVAHQKPHASMD
KHPSPRTQHIQQPRNRSAAGQQLCREQLPTTSLSGAVLQFTSASCWYKLRVAFRDPDLVG
SAAMEHPSKHLPACLSEQHPGGDAALQQHQGLNNRKHRMWFDAKGKGVKSMLRFQDWMAR
MLAKVLRKASVNGGGINMGSKRPFWADSSVPTWPPSRATVQGFDKHHHHHHCHHCITITI
ITIIITLITIITIITIITTITTITTIITITTIITITTITVTTITIITLIIIAIITIIITI
ITITIITITIIITIIITLTITTFIIIITIITTIITIIAIITIITTTIICHHYHHHHHDHN
HHHHHHYHHHHDHHYHPPPHIYWTLTMC

>gi568815593r:10581059_10861068|GENSCAN_predicted_CDS_4|1707_bp
atggtgtattatcgagaggtttcctgtcaggtccaatttgggatcatcaaattaattgtt
acgtgtgacaagctgacatgcaaagaaagcaataaatacctcagtgccagctccttgttg
gaattccatggaatcgattatggagcctttggcttgggaaggttgcctgtggagttcatc
ctgagagggcatgttaaatatcagtcagatgtcaacagagataaagatgtaaggcagatt
ggttggctggttggttggctggttggtcggctggttgcgtcctatacagtgtgtgaacac
caaatgcctgttagtggagaggaggaagaagatgacagtgataagaagcggagacaagct
cctatgtccctccagcaactggacaggcaggaaaaagtaggagatgctccagagattgtg
caaatgcttccttattttcaggcatgcttgatacttataaacaccgtagacagacagaca
gatagtccacctaaacccactgtgttcatctctggggtcatcgcccggggacactggtgg
gtgctggcctgggggttcctcacccacaaacaccatgcttcctgcagggacgttgatggg
cgctggcctggacgttcctcacatacaaccgccatgcttcctgcagggacgctgggtgac
aaagatttccccccggcggctgcgcaggtggctcaccagaagccgcatgcctccatggac
aagcatccttccccaagaacccagcacatccagcagccacgcaaccgatctgctgcaggt
cagcaactgtgtcgtgagcagctgccaaccaccagcctttctggtgctgttctccagttc
acgtctgccagctgttggtataaactgagggtggcttttagagacccagacttggttggc
agcgctgccatggaacaccccagcaagcacctcccagcctgcctttcggagcagcaccca
ggaggggatgccgcgctccagcaacaccagggactaaataacagaaaacacagaatgtgg
tttgatgcgaagggcaagggggtcaagagcatgctgcggtttcaagactggatggccagg
atgttggcgaaggtgttaagaaaagccagcgtgaatggaggaggaattaacatgggaagc
aagagaccattctgggcagactccagtgtgcccacgtggcctccaagcagagctactgtg
cagggctttgacaagcaccatcatcaccatcattgccatcattgcattaccattaccata
attaccattatcatcaccctcatcaccatcatcaccatcatcaccatcatcaccaccatc
accaccatcaccaccatcatcaccatcaccaccatcatcaccatcaccaccatcaccgta
actaccatcaccatcatcaccctcatcatcattgccatcatcaccatcatcattaccatc
atcaccatcaccataattaccatcaccatcatcattaccattatcatcactctcaccatc
accaccttcatcatcattatcaccatcattaccaccatcattaccatcattgctattatc
accatcattaccaccaccatcatttgtcatcactatcaccaccaccaccatgatcataac
catcaccaccaccaccactatcaccaccatcatgatcatcattatcatcctcctcctcac
atttattggacacttactatgtgctag

>gi568815593r:10581059_10861068|GENSCAN_predicted_peptide_5|226_aa
MTRRGFRGAEAAARFSGRAGVRESWLFEKISKIDRPLARLIKKKREKNQIDAIKNDKGDI
TINHTEIQTTIREYYKHLYANKLENLEEMDEFLDTYTLPRLNQEDVESLNRPITGSEIQA
IINSLPTKKSPGPDGFTAEFYQRYKEELARIEVAAGPYGFASNSDIFHQGNTIIICKSLM
PGSDLPRILFRPPYVELTSSHCQIVPSGPLVVYRKTTPNPSLVADG

>gi568815593r:10581059_10861068|GENSCAN_predicted_CDS_5|681_bp
atgacgcggcggggcttccgcggggccgaggcggcggcgcggttctcgggccgggcgggc
gtgcgcgagagctggctttttgaaaagatcagcaaaattgatagaccactagcaagacta
ataaagaagaaaagagagaagaatcaaatagatgcaataaaaaatgataaaggggatatc
accatcaatcatacagaaatacagactaccatcagagaatactataaacacctctacgca
aataaactagaaaatctagaagaaatggatgaattcctggatacatacaccctcccaaga
ctaaaccaggaagatgttgaatccctgaatagaccaataacaggctctgaaattcaggca
ataattaatagcctaccaaccaaaaaaagtccaggaccagatggattcacagctgaattc
taccagagatacaaagaggagctggcaagaattgaggttgctgcaggcccatatggattc
gccagtaactcagacatcttccaccagggtaacaccatcatcatttgtaaaagtctcatg
ccgggatcagacctgccccgtattctattcaggccaccctatgtggaattaacttcctca
cattgccagattgtaccttctggacctctggtcgtctaccggaaaaccacacccaaccca
agtctagtggcagatgggtga

>gi568815593r:10581059_10861068|GENSCAN_predicted_peptide_6|186_aa
MQGEAGRADGKAAASYLEDLAKTIGEGGYTKQQIFNVDEIAFYRRKMPSWTFTAREKSVL
GFKASKDMLTFLLGANAAGSMFSNSETTQKPTDLCNPTGLELCLVVPSTCGKREVMSVFL
PYECETCDCSNHEKMVEVTVRDQSLKGTTSLYMDLALSQMFTLGTTCSSTSSIVIRLQDN
SFADAT

>gi568815593r:10581059_10861068|GENSCAN_predicted_CDS_6|561_bp
atgcaaggtgaagcaggacgtgctgatggaaaagctgcagcaagctatctagaagatcta
gctaagacaattggtgaaggtggttacactaaacaacagattttcaatgtagatgaaata
gccttctatcggaggaagatgccatcttggactttcacagctagagagaagtcagtgctt
ggtttcaaagcttcaaaggacatgctgacttttttgttaggggccaatgcagctggttct
atgttttcaaactcagaaaccacgcagaaacccacagatctttgcaaccccacaggtttg
gaactatgcttggtcgttcctagtacttgtggaaagagagaagtcatgtctgtgtttctt
ccctatgaatgtgagacttgtgactgctccaatcatgagaaaatggtggaagtgacagta
cgtgaccaaagcttaaagggtacaacctccctttatatggacctggccctctctcagatg
tttacccttggaaccacttgcagctctacctcaagcatcgtcatcagactccaggacaac
agctttgcagatgccacttaa

>gi568815593r:10581059_10861068|GENSCAN_predicted_peptide_7|69_aa
MHDWGPIETHKDEKFLSREAMEELDSCCLHYGRGCAWHADMCFLCGSMLPPLKQNRKSEA
CGSREELTQ

>gi568815593r:10581059_10861068|GENSCAN_predicted_CDS_7|210_bp
atgcatgactggggacctattgagacgcacaaagatgaaaagttcctctccagagaggct
atggaggaattagactcctgttgcttacactacggcaggggatgcgcgtggcatgctgac
atgtgttttctgtgcggctcaatgcttcctccactaaagcaaaaccgcaagtctgaggcc
tgtggcagcagggaagagctgacccaatga