GENSCAN 1.0	Date run:  6-Nov-116	Time: 21:41:11

Sequence gi568815582r:11773122_12015546 : 242425 bp : 45.29% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 Intr -   1398   1115  284  1  2   89  115   164 0.944  16.34
 1.05 Intr -   1892   1859   34  2  1  102   91    32 0.999   2.70
 1.04 Intr -   3411   3331   81  0  0   97   99    -1 0.769   1.73
 1.03 Intr -   3788   3630  159  2  0   80   80   118 0.999  10.38
 1.02 Intr -   6242   6045  198  2  0  101  101   118 0.999  13.95
 1.01 Init -  24209  24003  207  2  0   51   91   186 0.948  12.02
 1.00 Prom -  25178  25139   40                              -6.56

 2.12 PlyA -  25363  25358    6                               1.05
 2.11 Term -  26677  26471  207  1  0  101   42    79 0.125   1.94
 2.10 Intr -  30959  30862   98  0  2   29  105    48 0.046   0.33
 2.09 Intr -  44876  44741  136  2  1   63   77    53 0.059   1.84
 2.08 Intr -  64992  64732  261  0  0   89   28   122 0.463   3.98
 2.07 Intr -  66864  66574  291  0  0   58   57   187 0.847   9.93
 2.06 Intr -  68699  68574  126  2  0   75   30    74 0.688   1.18
 2.05 Intr -  68879  68786   94  1  1   48   77   106 0.748   5.47
 2.04 Intr -  73722  73574  149  0  2   85  100    17 0.604   1.63
 2.03 Intr -  74685  74547  139  2  1   83   91    32 0.325   3.47
 2.02 Intr -  77297  77158  140  2  2   98   87   -36 0.269  -3.44
 2.01 Init -  78391  78287  105  1  0   84  109   110 0.549  12.51
 2.00 Prom -  85002  84963   40                              -4.16

 3.14 PlyA -  86143  86138    6                               1.05
 3.13 Term -  91211  91140   72  2  0   98   37    39 0.137  -2.29
 3.12 Intr - 103054 102965   90  1  0   50   79    70 0.816   2.49
 3.11 Intr - 104459 104286  174  2  0   61   97   161 0.999  14.44
 3.10 Intr - 110055 109894  162  0  0    8  116   118 0.658   6.77
 3.09 Intr - 112153 112060   94  0  1   79   75    64 0.996   4.17
 3.08 Intr - 113490 113350  141  2  0   58  103    64 0.883   4.37
 3.07 Intr - 113810 113656  155  2  2   44   83    78 0.994   1.77
 3.06 Intr - 114609 114449  161  1  2   43   99   116 0.268   7.91
 3.05 Intr - 123664 123437  228  2  0   29   87   157 0.183   7.54
 3.04 Intr - 124760 124719   42  0  0   77   91    37 0.208   1.11
 3.03 Intr - 142585 142248  338  0  2   19   70   670 0.311  53.46
 3.02 Intr - 143259 143017  243  2  0   77   26   197 0.572   9.01
 3.01 Init - 148479 148391   89  0  2   72   90    40 0.785   2.74
 3.00 Prom - 149684 149645   40                              -5.06

 4.00 Prom + 150764 150803   40                              -2.66
 4.01 Init + 152150 152190   41  1  2   80   81    16 0.949  -0.22
 4.02 Intr + 153077 153183  107  2  2   93  101   162 0.984  17.86
 4.03 Term + 158112 158272  161  1  2   40   43   131 0.235   1.90
 4.04 PlyA + 158663 158668    6                              -3.44

 5.05 PlyA - 159126 159121    6                              -0.45
 5.04 Term - 160540 160392  149  2  2   47   44   184 0.965   7.96
 5.03 Intr - 160803 160704  100  0  1   69   86    64 0.973   3.98
 5.02 Intr - 164547 164419  129  0  0   82   92    32 0.931   3.89
 5.01 Init - 168122 168048   75  2  0   70   56   113 0.985   5.39
 5.00 Prom - 168561 168522   40                              -3.56

 6.00 Prom + 178177 178216   40                              -4.66
 6.01 Init + 194466 194722  257  2  2   75   59   214 0.816  13.90
 6.02 Intr + 203475 203692  218  0  2   11  101   102 0.372   1.95
 6.03 Intr + 204461 204564  104  0  2   83   90    49 0.356   4.49
 6.04 Intr + 205002 205044   43  2  1   53   81    22 0.196  -4.19
 6.05 Intr + 212434 212507   74  2  2   96   41    93 0.636   4.53
 6.06 Term + 214603 214662   60  0  0  127   44    28 0.477   0.10
 6.07 PlyA + 215682 215687    6                               1.05

 7.05 PlyA - 215695 215690    6                               1.05
 7.04 Term - 217608 217464  145  2  1   56   35   155 0.526   4.38
 7.03 Intr - 219523 219414  110  1  2   75   99     9 0.481  -0.22
 7.02 Intr - 229639 229370  270  1  0   32   39   188 0.368   6.04
 7.01 Init - 238640 238635    6  2  0   84  115    10 0.507   3.61

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815582r:11773122_12015546|GENSCAN_predicted_peptide_1|321_aa
MAASPGRQARPPAARGRRRGRNRAAAAAANRGRAASEHPGPAAAAATAARLPPPASACLL
PPAGASSPQVYLRALVRNLFNEGNDVYREHDWNNSISQYTEALNIADYAKSEEILIPKEI
IEKLYINRIACYSNMGFHDKVLEDCNIVLSLNASNCKALYRKSKALSDLGRYKKAYDAVA
KCSLAVPQDEHVIKLTQELAQKLGFKIRKAYVRAEALNHSVEDIEPDLLTPRQEAVPVVS
LPAPSFSHEVGSELASVPVMPLTSILPLQVEESALPSAVLANGGKMPFTMPEAFLDDGDM
VLGDELDDLLDSAPETNETVM

>gi568815582r:11773122_12015546|GENSCAN_predicted_CDS_1|963_bp
atggcggcgtctcccgggcggcaagcgcggcctcccgccgctagagggcgccgccgcggg
cgcaaccgagccgctgccgccgccgctaaccgagggagagctgcgagcgagcacccaggc
cccgccgccgccgccgccaccgctgcccgcctgccgccgcccgcctccgcctgccttctg
ccgccggccggcgcgtcgtccccacaggtatatttgcgtgctctcgtgagaaatcttttt
aatgaaggaaatgacgtttatcgggaacatgattggaacaactcgataagccagtacacg
gaagccttgaatatagctgattatgcaaaatctgaagaaattttaatccccaaagaaata
attgaaaaactatatataaatcgtattgcctgctattctaatatgggtttccatgataaa
gttttggaggactgcaatatagtcctcagtttaaatgccagtaactgcaaagctctgtat
cggaaatctaaggctttaagtgatttaggaagatacaaaaaggcttacgatgctgtagca
aagtgctccttagcagtgcctcaggatgagcatgtaataaaactaactcaagaactagct
cagaaattgggatttaaaataagaaaagcgtatgtcagagctgaggctttgaaccattct
gtggaagatattgagccagatttattaactccaaggcaagaagcagttcctgttgtctct
ttaccggcacccagtttttctcatgaagttggaagtgagctggcctcagttcctgttatg
cccttaacttctattttgccactacaagtggaagagagcgctctgccatctgcagtgctg
gcaaatggaggaaagatgcccttcactatgccagaagcttttctagatgatggagatatg
gtccttggagatgaactagatgacctgcttgattctgcacctgaaactaatgaaactgtt
atg

>gi568815582r:11773122_12015546|GENSCAN_predicted_peptide_2|581_aa
MEDSASASLSSAAATGTSTSTPAAPTARKQLDKEQVRKAVDALLTHCKSRKNNYGLLLNE
NESLFLMVVLWKIPSKELRVRLTLPHSIRSDSEDICLFTKDEPNSTPEKTEQFYRKLLNK
HGIKTVSQIISLQTLKKEYKSYEAKLRLLSSFDFFLTDARIRRLLPSLIGRHFYQRKNAI
RIGHVGMQIEHIIENIVAVTKGLSEKLPEKWESVKLLFVKTEKSAALPIFSSFVSNWDEA
TKRSLLNKKKKEARRKRRERNFEKQKERKKKRQQARKTASVLSKDDVAPESGDTTVKKPE
SKKEQTPEHGKKKRGRGKAQVKATNESEDEIPQLVPIGKKTPANEKVEIQKHATGKKSPA
KSPNPSTPRGKKRKALPASETPKAAESETPGKSPEKKPKIKEEAVKEKSPSLGKKDARQT
PKKPEAKFFTTPSKSIMAFVSSHVSVWLFVTTIQCLRAQGSGNFQRAEHGEVPGGWLTQE
AERKTKATGNNPIILTPNTAENRYNMQRGGGFKVSRTWKLAGAGVSPVSRDLLSLLATGL
DEVISDHDDCLEDQIGRCVSEQLLDGLSVKASPREATVVEA

>gi568815582r:11773122_12015546|GENSCAN_predicted_CDS_2|1746_bp
atggaggattcggcctcggcctcgctgtcttctgcagccgctactggaacctccacctcg
actccagcggccccgacagcacggaagcagctggataaagaacaggttagaaaggcagtg
gacgctctcttgacgcattgcaagtccaggaaaaacaattatgggttgcttttgaatgag
aatgaaagtttatttttaatggtggtattatggaaaattccaagtaaagaactgagggtc
agattgaccttgcctcatagtattcgatcagattcagaagatatctgtttatttacgaag
gatgaacccaattcaactcctgaaaagacagaacagttttatagaaagcttttaaacaag
catggaattaaaaccgtttctcagattatctccctccaaactctaaagaaggaatataaa
tcctatgaagccaagctccgccttctgagcagttttgatttcttccttactgatgccaga
attaggcggctcttaccctcactcattgggagacatttctatcaaagaaagaatgctata
cgtattggtcacgttggaatgcaaattgagcacatcattgaaaacattgttgctgtcacc
aaaggactttcagaaaaattgccagagaagtgggagagcgtgaaactcctgtttgtgaaa
actgagaaatcggctgcacttcccatcttttcctcgtttgtcagcaattgggatgaagcc
accaaaagatctttgcttaataagaagaaaaaagaggcaaggagaaaacgaagagaaaga
aattttgaaaaacaaaaggagaggaagaagaagaggcagcaggctaggaagactgcatca
gttcttagtaaagatgatgtggcacctgaaagtggtgatactacagtgaagaaacctgaa
tcaaagaaggaacagaccccagagcatgggaagaaaaaacgtggcagaggaaaagcccaa
gttaaagcaacaaatgaatccgaagacgaaatcccacagctggtaccaataggaaagaag
actccagctaatgaaaaagtagagattcaaaaacatgccacaggaaagaagtctccagca
aagagtcctaatcccagcacacctcgtgggaagaaaagaaaggctttgccagcatctgag
accccaaaagctgcagagtctgagaccccagggaaaagcccagagaagaagccaaaaatc
aaagaagaggcagtgaaggaaaaaagtccttcgctggggaaaaaagatgcgagacagact
ccaaaaaagccagaggccaagtttttcaccactcctagtaaatctatcatggcctttgtg
tccagtcatgtttctgtctggttgttcgtcacaactatccagtgcctaagagcacagggt
tcagggaacttccagagagctgaacacggggaggttcctggagggtggctgacccaagaa
gctgaaaggaaaaccaaggcaaccggaaataatcctattatactgactcctaatacagct
gagaacaggtacaacatgcagaggggtggaggattcaaggtgtcaagaacctggaaactg
gctggggctggggtgtcaccagtatccagagacctcctgagccttctggcaacaggacta
gacgaggtcatttcagatcatgatgactgcttggaagatcagatagggcgctgtgttagt
gagcaacttttagatgggctgtcagtgaaggcctctccaagagaggctactgtagttgag
gcctga

>gi568815582r:11773122_12015546|GENSCAN_predicted_peptide_3|662_aa
MSHSAQLAIISLTHLQAFLIRILNREGFSSLCPAGQSGPLLWAKILSVFGPAQSCTNQGL
PLPPHQVTGGAAERPPDLRLLALPAGSRSRFRLRPVPELRLPSAPGKTAAGGGGGGGGGG
GGSSSGSSSSDSAPDCWDQADMEAPGPGPCGGGGSLAAAAEAQRENLSAAFSRQLNVNAK
PFVPNVHAAEFVPSFLRGPAAPPPPVGGAANNHGAGSGAGGRAGSNSAVSMELSEPIVEN
GETEMSPEESWEHKEEISEAEPGGGSLGDGRPPEESAHEMMEEEEEIPKPKSVVAPPGAP
KKEHVNVVFIGHVDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAS
QADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERY
EECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIGLPFIPYLDNLPNF
NRSVDGPIRLPIVDKYKCRISLWAIELLYSTKKSETGFYFTFDQDMGTVVLGKLESGSIC
KGQQLVMMPNKHNVEVLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILCDPNNLC
HSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVEITIYSILCMNNFSKSFYRSLIDD
VA

>gi568815582r:11773122_12015546|GENSCAN_predicted_CDS_3|1989_bp
atgagccacagcgcccagctggctattatatctttaacacatctccaagctttcctcatc
cgcattttgaacagggagggcttcagcagcctgtgtccagcaggccagagtggacccctc
ctatgggctaaaatactctcggtcttcggcccagcacagagctgcaccaaccagggcctg
ccgctgcccccccaccaggtgacaggtggggccgccgagcggccaccagacctccgcctc
ctcgcgttgcctgccgggagccggagccgcttccggttgcgccctgtccctgaacttcga
ctcccgtcggcccccgggaaaaccgcagcgggtggcggcggcggcggcggcggcggcggc
ggcgggagcagcagcggcagcagcagcagcgactcggcgcctgactgctgggaccaggcg
gacatggaagcccccgggccgggcccttgcggcggcggcggctccctggcggcggcggcc
gaggcccagcgggagaacctcagcgcggccttcagccggcaactcaacgtcaacgccaag
cccttcgtgcccaacgtccacgccgccgagttcgtgccgtccttcctgcggggcccggca
gcgccgccacccccagttggcggcgccgccaataaccacggagccggcagcggcgcggga
ggccgtgcgggttcaaattcagctgttagcatggaactttcagaacctattgtagaaaat
ggagagacagaaatgtctccagaagaatcatgggagcacaaagaagaaataagtgaagca
gagccagggggtggttccttgggagatggaaggccgccagaggaaagtgcccatgaaatg
atggaggaggaagaggaaatcccaaaacctaagtctgtggttgcaccgccaggtgctcct
aagaaagagcatgtaaatgtagtattcattgggcacgtagacacaaatcaggaagaacga
gacaagggtaaaacagtagaagtgggtcgtgcctattttgaaaccgaaaagaagcatttc
acaattctagatgcccctggccacaagagttttgtcccaaatatgattggtggtgcctct
caagctgatttggctgtgctggtaatctcagccaggaaaggagagtttgaaactggattt
gaaaaaggaggacagacaagagaacatgcaatgttggcaaagacagcaggtgtaaaacac
ctaattgtgctaattaataagatggatgatccaacagtaaattggagcaatgagagatat
gaagaatgtaaggagaaactagtgccatttttgaaaaaagttggcttcaatcccaaaaag
gacattcactttatgccctgctcaggacttactggagcaaatctcaaagagcagtcggat
ttctgtccttggtacattggattaccgtttattccatatctggataatttgccgaacttc
aatagatcagttgatggaccaatcaggctgccaattgtggataagtacaagtgtagaatt
tcactttgggctattgagctgttatacagcaccaagaagtctgaaactggattttatttt
acatttgatcaggatatgggcactgtggtcctgggaaagctggaatcaggatctatttgt
aaaggccagcagcttgtgatgatgccaaacaagcacaacgtggaagttcttggaatactt
tccgatgatgtagagactgataccgtagccccaggtgaaaacctcaaaatcagactgaaa
ggaattgaagaagaggagattcttccagggtttatactttgtgatcctaataatctttgt
cattctggacgcacatttgatgcccagatagtgattatagagcacaaatccatcatctgc
ccaggctataatgcggtgctgcatattcatacctgtattgaggaggtggaaataacaatt
tattcaattctgtgcatgaataacttctctaagtccttttatagatccctgattgatgac
gtagcataa

>gi568815582r:11773122_12015546|GENSCAN_predicted_peptide_4|102_aa
MKGGNPILREGVAWCCHGHDCCYTRAEEAGCSPKTERYSWQCVNQSVLCGDNGKPSTLVL
TDFNKVQFTEIEGRKRKRPKKGKFAVLPSHHLIHGPDPKDLT

>gi568815582r:11773122_12015546|GENSCAN_predicted_CDS_4|309_bp
atgaagggagggaatccaattttacgagagggtgtagcctggtgctgccatggccacgac
tgttgttacactcgagctgaggaggccggctgcagccccaagacagagcgctactcctgg
cagtgcgtcaatcagagcgtcctgtgcggtgacaacggcaaaccatccaccctggtgttg
actgactttaacaaggttcagttcacagagattgagggcagaaaaaggaaacggcctaaa
aagggtaagtttgctgtgttgccctcacaccacttgattcatggtcctgatcctaaggat
ctcacctga

>gi568815582r:11773122_12015546|GENSCAN_predicted_peptide_5|150_aa
MRVLWMLFWLLFWLLLEFISHQSTCVINTLADHHHRGTDFGGSPWLRIIIAFPRSYKVVL
TLWTVYLWLSFLKTIFQSENGHDVSTDVQQRARRSNRRRQEGNKIGLKDVITLRRHVETK
GRAKIRKMKVTTKINHHDKINGKRKTAKKQ

>gi568815582r:11773122_12015546|GENSCAN_predicted_CDS_5|453_bp
atgcgggtgctgtggatgctcttttggctcctcttttggctcctgctggaatttatcagc
catcagtccacctgtgttatcaatactctggctgaccatcatcatcgtgggactgacttt
ggtggaagtccttggttacgtatcattattgcatttccgagaagttataaagttgtcctt
accctctggacagtttacctttggttgtctttcctgaagactatcttccagtctgaaaat
ggacatgatgtatccacagatgtacagcagagagccaggaggtccaaccgccgtagacag
gaaggaaataaaattggcctgaaagacgtcattactctacggagacatgtggaaacaaaa
ggtagagctaaaatccgtaagatgaaggtgacaacgaaaatcaaccatcatgacaaaatc
aatggaaagaggaagaccgccaaaaaacagtaa

>gi568815582r:11773122_12015546|GENSCAN_predicted_peptide_6|251_aa
MANIDLEKSRTGDEIILPRGLEYTVEECTCEDCIKSKPKVDSDHCFPLPAMEEGATILVT
TKTNDYCKSLPAALSATEIEKSISASTALHTGSGDLDLRRGLRSGSAGGASSAARLYFRG
GAAGAGLLSPGLSGARQPQKRQRRRRGAGTGPGRGTMSAHLGTVTSSFFFPVQTSSSHHR
GGGVDGDAGSEREGKICEMDSPNNEGAGSRSSMERAGHVVILQPITVILVGQKMEIKASN
ECIVRFSGPGT

>gi568815582r:11773122_12015546|GENSCAN_predicted_CDS_6|756_bp
atggctaacattgacctggaaaagagcaggactggtgatgaaattattcttccgagaggc
ctcgagtacacggtggaagaatgcacctgtgaagactgcatcaagagcaaaccgaaggtc
gactctgaccattgctttccactcccagctatggaggaaggcgcaaccattcttgtcacc
acgaaaacgaatgactattgcaagagcctgccagctgctttgagtgctacggagatagag
aaatcaatttctgctagcaccgctctccacaccgggtccggcgacttggatctgcgccgc
ggtttacgttccgggtcggcgggcggggcctcgtcggcggccaggctctacttccggggc
ggggcggccggggcggggctcctgtctcccggcctgtctggagctcggcagccgcagaag
cggcagcggcggcggcgcggcgcaggcaccggcccggggagaggcaccatgagcgcccat
ctggggaccgtcacttcgtccttcttcttcccagtccaaacttcttcctctcaccatcga
gggggtggtgttgatggggatgctggaagtgagagggagggcaagatttgtgaaatggac
agtcctaataatgagggggctggcagccgctcctccatggagcgggctggccatgtggtc
atcctgcaacccatcactgtgattttggttggccagaaaatggaaattaaagcaagtaat
gaatgtatagtgcgtttctcaggacctggaacatag

>gi568815582r:11773122_12015546|GENSCAN_predicted_peptide_7|176_aa
MKKQALWENIANRKTKAHSHLCIIQEAAPACRQLTVYHTQLFTGDNYNFYKPVLNGSLWT
SPRVVMTGYDVTTAQIKPHMSHLVVRNDNLLRASVPSTHHTVILVGTRASSLNNWEPEPC
LQNWEGQNRPHIQSLAGNKDIINLLSLQNSFSVTLAGIWDARRYQPNDDFSVAAIV

>gi568815582r:11773122_12015546|GENSCAN_predicted_CDS_7|531_bp
atgaagaagcaagccttgtgggaaaacattgctaacagaaaaacaaaagcacacagccat
ctgtgcattatccaggaagctgctcctgcctgtcggcagctgactgtctaccacacacag
ctcttcacgggcgataattacaacttctataagcctgtgctgaatggatccctttggacg
agccccagagttgtcatgactggctatgacgttacaacagcacaaatcaagcctcatatg
agtcatctggttgtgcggaatgacaatttactgagggcaagtgttccttccacacaccac
actgtcatcctggtggggaccagggcaagctcactgaacaattgggaacctgagccgtgc
ttgcaaaactgggaaggacagaacaggccccacatacagagtcttgcagggaacaaggac
atcatcaacctgttgtcactgcagaattcattctcagttacactggcgggcatctgggat
gcccggcgctaccagcccaatgatgactttagtgttgctgctattgtttaa