GENSCAN 1.0	Date run:  6-Nov-116	Time: 21:49:54

Sequence gi568815584r:54378091_54583768 : 205678 bp : 41.14% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   6277   6310   34  0  1   89  106    51 0.924   7.08
 1.02 Term +   7788   8089  302  1  2   40   38   253 0.549   9.90
 1.03 PlyA +   9812   9817    6                               1.05

 2.08 PlyA -  10940  10935    6                               1.05
 2.07 Term -  15036  14896  141  0  0   63   53   177 0.982   8.65
 2.06 Intr -  15817  15543  275  2  2   47   68   245 0.971  14.73
 2.05 Intr -  16286  16158  129  0  0   23   42   115 0.244   0.15
 2.04 Intr -  16811  16485  327  0  0   47   73   136 0.233   2.75
 2.03 Intr -  19111  18919  193  1  1   59    6   252 0.099  12.24
 2.02 Intr -  20419  20319  101  2  2   76   76   108 0.011   7.31
 2.01 Init -  24536  24362  175  2  1   71   20   122 0.022   3.26
 2.00 Prom -  24828  24789   40                              -5.95

 3.22 PlyA -  25209  25204    6                               1.05
 3.21 Term -  29171  28539  633  2  0   10   41   458 0.928  26.60
 3.20 Intr -  29382  29244  139  2  1   89   39   115 0.175   6.25
 3.19 Intr -  51341  51119  223  0  1  115   75   124 0.136  10.06
 3.18 Intr -  52314  52235   80  2  2   89  -24    74 0.161  -5.42
 3.17 Intr -  54130  54018  113  1  2  108   75    -2 0.252  -1.24
 3.16 Intr -  58347  58279   69  0  0   48  105    84 0.529   4.56
 3.15 Intr -  63379  63157  223  0  1    9   94   323 0.079  22.21
 3.14 Intr -  65378  65177  202  0  1   42   97    57 0.004  -0.58
 3.13 Intr -  66423  66301  123  1  0   89   89     7 0.007   0.54
 3.12 Intr -  68190  68125   66  1  0   84   54    68 0.118   0.96
 3.11 Intr -  69327  69202  126  1  0   76   47   129 0.125   7.33
 3.10 Intr -  72117  72024   94  0  1   98   11    95 0.121   1.42
 3.09 Intr -  93005  92879  127  1  1   32   72   173 0.079   9.86
 3.08 Intr -  95074  94927  148  2  1  109    5    80 0.068   0.17
 3.07 Intr - 100069 100024   46  1  1   85   46    69 0.088  -0.54
 3.06 Intr - 103368 103276   93  0  0   68   29   117 0.004   3.04
 3.05 Intr - 104112 104063   50  1  2   60   68   101 0.992   2.78
 3.04 Intr - 105677 105581   97  2  1   99   71   156 0.997  13.66
 3.03 Intr - 110318 110233   86  0  2   98   25    70 0.053   0.32
 3.02 Intr - 127237 127102  136  1  1  111   80    96 0.104  10.32
 3.01 Init - 128794 128735   60  1  0   70   34    53 0.036  -0.60
 3.00 Prom - 130601 130562   40                              -6.25

 4.06 PlyA - 131166 131161    6                               1.05
 4.05 Term - 132120 131810  311  1  2   68   52   350 0.632  23.64
 4.04 Intr - 132239 132150   90  0  0   60   61   168 0.932  10.35
 4.03 Intr - 134174 134061  114  0  0   81   22    81 0.296   0.30
 4.02 Intr - 139846 139767   80  0  2   54   89    53 0.255   0.28
 4.01 Init - 142495 142374  122  1  2   69   27   136 0.308   5.31
 4.00 Prom - 144806 144767   40                              -6.35

 5.00 Prom + 150574 150613   40                              -6.65
 5.01 Init + 151038 151133   96  2  0   87    2    91 0.353   0.76
 5.02 Intr + 152784 152960  177  2  0   46   87   102 0.515   5.09
 5.03 Term + 159973 160293  321  0  0   83   49   113 0.350   0.74
 5.04 PlyA + 161173 161178    6                               1.05

 6.07 PlyA - 161212 161207    6                               1.05
 6.06 Term - 188583 188264  320  1  2   42   46   202 0.744   5.46
 6.05 Intr - 188934 188855   80  2  2  132   52   100 0.196   9.08
 6.04 Intr - 189499 189192  308  1  2   76   80   156 0.280   7.92
 6.03 Intr - 189759 189686   74  1  2   53   84   162 0.658  10.51
 6.02 Intr - 190114 189826  289  1  1   21   25   321 0.369  15.00
 6.01 Intr - 190314 190211  104  1  2   97  107   113 0.840  13.07

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  25244  24273  972  2  0   60   38   216 0.811  10.28
S.002 Init -  29360  29244  117  2  0   72   39    95 0.814   3.25
S.003 Term +  42456  42626  171  2  0   91   49   192 0.995  12.44
S.004 Intr - 103368 103263  106  0  1   68   33   136 0.985   4.97


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584r:54378091_54583768|GENSCAN_predicted_peptide_1|111_aa
MGSDSSEESEENIRKHQRRWLDHGCYENITDAGWTIWVTYRYSQKVYSLMGPPEIELLSS
VFLIHLRTVFLTCNYCQKLHPGGSTSRQLEWKRSVTPPPPRQTRLSSPSGS

>gi568815584r:54378091_54583768|GENSCAN_predicted_CDS_1|336_bp
atgggtagtgattcctctgaagaatctgaggaaaacatacgaaaacatcaaagacgctgg
ctggaccacggatgctatgaaaacatcacggatgctggctggaccatctgggtcacatac
agatactcacagaaggtttactctctgatgggaccacctgaaattgagctactcagttct
gtgtttctaatacacctgcggactgtgttcctaacttgcaattactgccaaaagttacac
cctgggggaagcacatcacggcaactggaatggaagagatcagtgacccctccaccgccc
cgacagaccagactatcaagcccctctgggtcttaa

>gi568815584r:54378091_54583768|GENSCAN_predicted_peptide_2|446_aa
MGKDFMTKTPKAIATKAKIDKWDLIKLKSFCTAKETIIRVNRQPTEWEKIFAVYASDKEL
DKCIHPVTGGHGQSGAPVCQRVDQKAPSAGRQNGYGASRTATRLGLPSGPGSGPRDRLRP
CRLAPPNPSTSDSPASSLAAPRRDQCRLPLQRRRLTGDNVLAALTRSQCLLGLGVHSSHA
SGALRPAAALWEPLCVLAETRAGSLCLRGSVEREGGAGGNRGCAQPLRASASSGWARAGW
APHSYGLNWWVFRLTDFKNEATDPRMKLQTFMVSVTVLQLVKAVRTQRVSSNNIYGKEQK
TKFSPVWKDSEAQLASPSGSRTGAADGAACQSAAVHPHSSAFGWSMGLGALEQEAALIGE
TRAAQEPTEAVGGSGMAGCRSRALPAGRQLMPGEKSSAAPGRARDLQLAMPEPPPPTLRG
LLGGPSLPDGRRSLLQGARSHPPPKG

>gi568815584r:54378091_54583768|GENSCAN_predicted_CDS_2|1341_bp
atgggcaaagacttcatgactaaaacaccaaaggcgattgcaacaaaagccaaaattgac
aaatgggatttaattaaactaaagagcttctgcacagcaaaagaaactatcatcagagtg
aataggcaacctacagaatgggagaaaatttttgccgtctatgcatctgacaaagaatta
gacaaatgtatccacccagtcacaggtggccatggacagtctggggctcctgtgtgccag
agagtggaccagaaagcaccttctgcaggcaggcagaacggttacggcgccagtcgcact
gctaccaggctagggctgccctccggcccaggatcgggtccccgggaccgcttgcgtccc
tgccgcctcgctcctccaaaccccagcacgtccgactcaccggcttcatcgctggccgcc
ccacgtcgagaccagtgccgcctccctctgcagcgccggcgactcaccggtgacaacgtg
ctagcagccctcactcgctctcagtgcctcctcggccttggcgtccactctagccacgct
tcgggagcccttcggcccgccgctgcactgtgggagcccctctgtgtgctggcagagacc
agagctggctccctctgcttgcggggcagtgtggagagagagggaggcgcgggcgggaac
cgaggctgcgcgcagcccttgagggccagcgcgagttctgggtgggcgcgagctgggtgg
gctccgcactcgtatggcctgaattggtgggtttttcgtctcactgacttcaagaatgaa
gccacggaccctcgcatgaagctgcagaccttcatggtgagtgttacagtgttacagctc
gtaaaagcagtgcggacccaaagagtgagcagtaacaatatttacggcaaagagcaaaag
accaaattttccccagtgtggaaggactcagaagcccagctggcttcacccagcggatcc
cgcaccggggctgcagatggagctgcctgccagtccgccgccgtgcacccgcactcctca
gcttttgggtggtcgatgggactgggcgccctggagcaggaggcggcgctcatcggggag
actcgggccgcacaggagcccacggaggctgtgggaggctcaggcatggcgggctgcagg
tcccgagctctgcccgcaggaaggcagctaatgcccggcgagaaatcgagtgcagcgccg
ggcagggctcgggacctgcagcttgccatgcccgagcccccgccccctactctccgtggg
ctcctgggcggcccgagcctccccgatgggcgccgctccctgctccagggagcccggtcc
catccaccgcccaagggctga

>gi568815584r:54378091_54583768|GENSCAN_predicted_peptide_3|977_aa
MPNQATSATECHCSSTMVKVLFMAFSRNKAEARTGGYDAAPALALSPLHTPADHKQKTFL
PSYLAASYRGFLLIFAFLWQLETFRPKALALGLKSESLVVCDVAEDLVEKLRKFRFRKET
NNAAIIMKIDKDKRLVVLDEELEGISPDELKDELPERQPRYPFLSALKDLFSLVVFEIRN
TEDLTEEWLRGITELVEPDYQLITGSTLWCFRTQGLQNISSTDLMFYNSDFIPRNNLGRR
HLSGVVEEDPPSVWVSTIQSAGALERTKTEKANMPVYPVELVRTQCFSPSGDAAIRRHLG
RRQQPSPDTNPAGTPSAKGRMDDTATNIEKLHPAGQPEALYLHAAVTQGFGKVHRLQAAD
LCLAVQIGNMASGGSDESNFTKNVIGFYYFKKEIEMRLCLELVGSWSDFKNEATDPRGGA
ACQSRAVHPHSSALGWSMGLGAMEQGVALAGEAWAAQEPMEGVGGSGMAGCRSRALPRGK
AAKARRAERAGAAAVAVAVAAVAGGSEWFYPEGPAPPFSAGNGAAPRSSSPAMAFTFAAF
CYMLALLLTAALIFFAIWHIIAFDELKTDYKNPIDQCNTLNPLVLPEYLIHAFFCVMFLC
AAEWLTLGLNMPLLAYHIWRYMSRPVMSGPGLYDPTTIMNADILAYCQGVSASALLTLLG
CVGISVGSCPVYHGTFSSIPGLYPLVAMSTLLPPHDNQKCLWTLPDVLRGKIALGENHCC
RREHLAEGMAVGTASADLNISACWLRREQQISQHSARALLRDRLPPQENSSWHPAGAPLG
RNFQRKEQAAIFAVLQPPLVIPRKTGSGVDLEQTPADLQKRGLTVTRKTNKQKAIASTST
ERTPTQKPPFKSHQHQRPNVDKSAKMRKNQSKKAENSKNQNTSSPPKDHNSSPAREQNWT
ENEFDELTEVGFRRWVITNSSKLKEHVLTQCKETKKLDKRLEELLTIITSLEKNINDLME
LKNTAGELRDAYTSINS

>gi568815584r:54378091_54583768|GENSCAN_predicted_CDS_3|2934_bp
atgcccaatcaggctacctctgccactgaatgccattgctctagcaccatggtgaaggtg
ctttttatggccttttcacggaacaaggcggaagccagaacgggtggatatgatgctgca
cctgctctagccctttctcctctccacactccagcagatcacaagcagaagactttccta
ccctcctacttggcagcttcctacagaggatttctccttatctttgctttcctatggcag
ttggaaacctttcgacccaaagctttggcactgggccttaaaagtgagtctttggttgtt
tgtgatgttgccgaagatttagtggaaaagctgagaaagtttcgttttcgcaaagaaacg
aacaacgctgctattataatgaagattgacaaggataaacgcctggtggtactggatgag
gagcttgagggcatttcaccagatgaacttaaagatgaactacctgaacgacaacctcga
tatccttttcttagtgctttaaaagatttattttctttagtggtatttgaaataagaaat
accgaagacctaactgaagaatggttacgtgggatcacagaactggttgagccagattac
cagctcatcacaggctcgaccctgtggtgcttcagaacacagggtctgcagaatatctca
agcactgatcttatgttttacaacagtgattttatccccaggaacaatttggggagacgg
catctgagtggagtagtggaggaagatccaccctcggtgtgggtaagcaccatccaatct
gctggggccctggaaagaacaaaaacagaaaaggcaaatatgccagtctacccggtggag
ctggtgagaacacagtgtttctccccttcaggggatgcagcaataaggcgccatcttgga
aggagacagcagccctcaccagacaccaatcctgctggcactcccagtgcaaagggcaga
atggatgacacagccaccaatattgagaaactacatcctgctgggcagcctgaagctctc
tacttgcatgctgccgtaacccaaggttttggaaaggtacataggctccaagcagctgac
ttgtgtctagctgtccagattgggaacatggctagtgggggcagtgatgaaagtaacttt
acaaaaaatgttattggattttattattttaaaaaagaaatagagatgagattgtgcctg
gaattggtgggttcttggtctgacttcaagaatgaagccacggaccctcgtggtggagct
gcctgccagtcccgcgccgtgcacccgcactcctcagcccttgggtggtcgatgggactg
ggcgccatggagcagggggtggcgctcgctggggaggcttgggctgcacaggagcccatg
gagggggtgggaggctcaggcatggcgggctgcaggtcccgagccctgccccgcgggaag
gcagctaaggcccggcgcgctgagagggctggcgccgcggcggtagcggtggcggtcgcg
gctgtggccgggggaagtgaatggttttacccagagggccctgcgccgcctttctccgct
ggcaacggcgccgctccccgctcctcctccccagccatggcgttcacgttcgcggccttc
tgctacatgctggcgctgctgctcactgccgcgctcatcttcttcgccatttggcacatt
atagcatttgatgagctgaagactgattacaagaatcctatagaccagtgtaataccctg
aatccccttgtactcccagagtacctcatccacgctttcttctgtgtcatgtttctttgt
gcagcagagtggcttacactgggtctcaatatgcccctcttggcatatcatatttggagg
tatatgagtagaccagtgatgagtggcccaggactctatgaccctacaaccatcatgaat
gcagatattctagcatattgtcagggtgtctcagcttcggcactgttgacgcttctgggc
tgtgtgggaatttctgtgggaagctgtcctgtatatcatgggacgttcagcagcatccct
ggcctttacccactagttgccatgagcaccctcctgccccctcatgacaaccaaaaatgt
ctctggacattgccagatgtcctgaggggcaaaattgccctgggtgagaaccactgctgt
aggagagagcacctggcggaagggatggctgtgggcacagcttcagcagacttaaacatt
tctgcctgctggctccgaagagagcaacagatctcccagcacagtgctcgagctttgcta
agggacagactgcctcctcaagagaactccagctggcatccggcaggtgcccctctggga
cgaaacttccagaggaaggagcaggcagcaatctttgctgttctgcagcctccactggtg
atacccaggaaaacagggtctggagtggacctcgagcaaactccagcagacctgcagaag
aggggcctgactgttacaaggaaaactaacaaacagaaagcaatagcatcaacatcaacg
gaaaggacgcccacgcagaaacccccattcaaaagtcaccaacatcaaagaccaaacgta
gataaatccgcgaagatgaggaaaaaccagagcaaaaaggctgaaaattccaaaaaccag
aatacctcttctcctccaaaggatcacaactcctcgccagcaagggaacaaaactggaca
gagaatgagtttgatgaactgacagaagtaggcttcagaaggtgggtaataacaaactcc
tccaagttaaaggagcatgttctaacccaatgcaaggaaactaagaaacttgataaaagg
ttagaggaactgctaactataataaccagtttagagaagaacataaatgacctgatggag
ctgaaaaacacagcaggagaacttcgtgatgcatacacaagtatcaatagctga

>gi568815584r:54378091_54583768|GENSCAN_predicted_peptide_4|238_aa
MVASGSTGVGLTGKEHKKIDGNVQYLDRGLSCIDDVFDNTWKMRQAGSHYPQQTNARTEN
QTLHILTLQADMANSGKKQIVKNSEKYQGKNHDRKHMNSRDGIMGETKLSKTPQCGTTPR
CPSDTDQTVMQGSDAEKVGVLGTRGHRIPDVLRPAALRLRCPLLLVATPLWRYPPLRLSP
LGHLPSQYQAGGHDEAGKDHRDVEKRRVFIKRYQKHRSHQGLALGRARLQPRSPAQPG

>gi568815584r:54378091_54583768|GENSCAN_predicted_CDS_4|717_bp
atggttgcttccggaagtacaggagtaggactgactgggaaagagcataagaaaattgac
ggtaacgttcagtatcttgacagaggcttaagctgtatagatgatgtgtttgataacact
tggaaaatgcgtcaagctggaagccattatcctcagcaaactaatgcaagaacagaaaat
caaacattgcatattctcactttgcaggcagacatggcaaacagtggaaagaagcaaata
gtgaaaaactcagagaagtaccaagggaaaaaccatgacagaaaacacatgaacagtaga
gatggtattatgggagaaacaaagctgagtaaaacaccccaatgcggtaccaccccaaga
tgccccagcgacacggaccaaacggtgatgcagggcagtgacgcagagaaagtcggagtt
ctaggcacccggggacaccgaatccccgacgtcctccggcccgcggccctccggctccgg
tgccccctgctgctcgtcgcgaccccactctggcggtatccgccccttcgtctctcaccc
ctgggacacttaccatcccaataccaggccggtggtcacgatgaagcaggtaaagaccac
cgcgatgtagaaaagcggcgagtattcataaagcgttaccagaaacaccgcagccatcag
ggtcttgctctgggtagagcccggctccagccgcggagcccagcccagcccggctga

>gi568815584r:54378091_54583768|GENSCAN_predicted_peptide_5|197_aa
MTKTRPFLSSQCISAKEYYTLQFALLQFAPPAWQFTFTFSKSIKKDSKEEIYCQLPRDTK
IEDFGTVPRSRYPLVALLTLADEDDREIYDIQLFMSANNNFTPSNNSSSEEKNTDRSLLE
KVGLSESEVEPSEENSKDCVVCQNGTVNWVLLPCRHTCLCDGCVKYFQQCPMCRQFVQES
FALCSQKEQDKDKPKTL

>gi568815584r:54378091_54583768|GENSCAN_predicted_CDS_5|594_bp
atgaccaaaaccaggccctttttatctagtcagtgtatcagtgccaaggagtactacacg
ttacagtttgcgctgctacagtttgcacccccagcatggcaatttacctttacattttca
aaaagtattaaaaaggatagcaaagaagaaatatattgccagttaccaagagatactaaa
attgaagactttggtacagtacccagatctcgctatccattggtagcgctattgacctta
gctgatgaggatgaccgggaaatttatgatattcaacttttcatgtctgcaaataataat
ttcactccctccaacaattcctcttcagaagaaaaaaacacagacagaagtttgttggaa
aaggtgggactctctgaaagtgaagttgagccatcggaagagaacagcaaggactgtgtt
gtttgccagaatgggactgtgaactgggtactcttaccatgcagacacacatgcctgtgt
gatggctgtgtgaagtattttcagcagtgcccaatgtgcaggcagtttgttcaggaatct
tttgcactttgcagtcaaaaagagcaagataaagacaaaccgaagactctttga

>gi568815584r:54378091_54583768|GENSCAN_predicted_peptide_6|391_aa
XNCMREKSIIHATVATTRKGLTEFTVGKIPKRPAEGLASAWPEAEKRREERGLGRRDGGG
GRRTLTGAVGLAFEDVQLGAVGQRVLQAELEEAGLGLAHALEQRQQRNSLLALVPALKPA
RQHPDLVAKHHVWRSRSPAAGDAFLFQGGSGARTLQLWDGDFRRPGVSSPLGGNSDPSRP
HSRAAITTGRRERAAVRPRLAEERALGGRGHQRVLGPGEGASRGRLGSPKSSRPLRPLRT
RCGRWAIPHRVTARSLLPREAAERLQLHLQQQPASPPPGAPLDLGRRGRHSAGHTPREGT
AGVRSAAPFGQRGGPAGNADRRRRHTPPNDSKESSAAGVPPVPSRFSWPPPAGRRTQRLS
LQGAASFQQHAASGSQNFSGGGGSPRGGDPQ

>gi568815584r:54378091_54583768|GENSCAN_predicted_CDS_6|1176_bp
ngaaactgcatgagagaaaaatcaatcattcatgctaccgtagctaccacacggaaaggg
ctgacggagttcacagtgggcaaaatcccaaagcggccggcggagggactggcctcggcc
tggcccgaggcagagaagcggagggaggagcgggggttgggcaggcgggacggcggcggc
ggccgccgcacacttaccggggctgttggcctcgcgttcgaggacgtgcagctcggcgca
gtcggccagcgagtgctccaggcagagctggaggaagcgggcctgggtctggctcacgcg
cttgagcagcgacagcagcgcaacagtctgctcgcactcgttccagcccttaaaccagcc
cgccagcaccccgacctggtcgcgaaacatcatgtttggcggagccgcagccccgcggcc
ggagacgcgttcctgttccaaggtggctctggtgcccggacgctgcagctttgggatggt
gatttccggcgtcctggggtctcctccccgctgggcggcaactcggacccttcacgcccg
cattcccgagcggcgatcaccactggaaggagagaaagagctgcagtgagacctcggcta
gcggaggagcgcgccctggggggacgagggcatcagagggtgctggggccaggggagggg
gcgtcccgcggaaggttgggttcgccgaaatccagccgccccctccgccccctccgcacc
cgatgtgggagatgggctattccccaccgggtaacagcgagaagcctgcttcccagagaa
gcagccgagcggctgcagctccatctacagcaacagccagcatctccaccgccaggcgcc
cctctggatttaggccgccgagggcggcacagcgctgggcacacgccccgcgaggggacg
gccggggtccgcagcgctgctcccttcggccagcggggcggccccgcggggaatgcggat
cggcgccgcaggcacacgccccccaacgacagcaaagaaagttcggctgcgggggttccc
ccagtcccatcccggttctcgtggccgccgccggcggggaggagaacccagcgactcagc
cttcaaggagccgctagcttccaacaacacgctgcttccggctcccagaacttctcgggc
ggagggggaagcccccggggaggggacccccagtga