GENSCAN 1.0	Date run:  6-Nov-116	Time: 21:57:15

Sequence gi568815590r:94781635_94994121 : 212487 bp : 41.87% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1535   1638  104  1  2   58   31   110 0.429   2.06
 1.02 Intr +   2036   2168  133  2  1   78   64   110 0.972   7.33
 1.03 Intr +   6260   6418  159  1  0   85  113    47 0.938   6.16
 1.04 Intr +  41244  41547  304  2  1   78   96   110 0.418   6.04
 1.05 Intr +  41727  41927  201  1  0   56   88   107 0.739   5.84
 1.06 Intr +  43259  43433  175  0  1   58   63    68 0.677  -0.62
 1.07 Intr +  46088  46159   72  2  0  114   75    25 0.721   1.40
 1.08 Intr +  47341  47392   52  1  1   85  103    29 0.973   2.09
 1.09 Intr +  50358  50540  183  2  0   50   66   179 0.989  10.96
 1.10 Intr +  54890  54997  108  1  0   75   84    46 0.844   2.46
 1.11 Intr +  56829  56984  156  2  0   92  110    70 0.996   8.89
 1.12 Intr +  59857  59957  101  0  2   73   98    75 0.781   4.99
 1.13 Intr +  68282  68457  176  2  2   48   71    34 0.381  -3.64
 1.14 Intr +  69919  70052  134  2  2   45   92    49 0.605   0.44
 1.15 Intr +  72171  72281  111  2  0   75  113    32 0.818   4.06
 1.16 Intr +  75143  75344  202  1  1   87   99   183 0.978  17.24
 1.17 Intr +  77877  77998  122  1  2  108   63    32 0.970   1.99
 1.18 Intr +  83872  84066  195  0  0   62   84   139 0.982   9.59
 1.19 Intr +  85506  85562   57  2  0   92  114    -6 0.593   0.56
 1.20 Intr +  85642  85703   62  0  2   93  108    23 0.974   1.41
 1.21 Intr +  90250  90368  119  1  2   89  111    96 0.994  11.19
 1.22 Intr +  91740  91843  104  1  2  115   68    76 0.891   7.27
 1.23 Term +  98484  98600  117  2  0   49   47    98 0.587  -0.64
 1.24 PlyA +  98646  98651    6                               1.05

 2.05 PlyA -  98880  98875    6                              -0.45
 2.04 Term - 100111  99998  114  1  0   61   43   111 0.985   1.49
 2.03 Intr - 100655 100498  158  0  2  106   84    57 0.936   5.91
 2.02 Intr - 101258 101147  112  2  1   79  110    73 0.992   7.63
 2.01 Init - 101908 101903    6  1  0   53   73    10 0.257  -3.64
 2.00 Prom - 102328 102289   40                              -7.55

 3.00 Prom + 105992 106031   40                              -4.45
 3.01 Sngl + 110198 110473  276  1  0   36   32   337 0.986  18.03
 3.02 PlyA + 110486 110491    6                               1.05

 4.07 PlyA - 111689 111684    6                              -0.45
 4.06 Term - 112976 112767  210  2  0   65   49   144 0.159   4.51
 4.05 Intr - 114992 114818  175  1  1   62   45    98 0.189   1.92
 4.04 Intr - 122042 121925  118  0  1   38   85   125 0.614   5.80
 4.03 Intr - 124211 123894  318  0  0   40   61   134 0.521   0.91
 4.02 Intr - 125081 124989   93  0  0   72   66    81 0.767   3.32
 4.01 Init - 136342 136267   76  1  1   85   76    32 0.248   3.00
 4.00 Prom - 137245 137206   40                              -4.75

 5.03 PlyA - 137286 137281    6                               1.05
 5.02 Term - 138104 137874  231  2  0   61   44   144 0.901   2.79
 5.01 Init - 139236 139126  111  0  0   71   50   125 0.928   7.26
 5.00 Prom - 139807 139768   40                              -9.15

 6.07 PlyA - 140287 140282    6                               1.05
 6.06 Term - 141499 141336  164  2  2   94   41   101 0.555   3.12
 6.05 Intr - 149094 148862  233  2  2  105   22   150 0.187   6.59
 6.04 Intr - 154919 154725  195  1  0   49   81   112 0.356   4.21
 6.03 Intr - 158586 158226  361  1  1   -4   98   238 0.372   8.95
 6.02 Intr - 159298 159196  103  1  1   48   82   148 0.057   9.03
 6.01 Init - 163001 162945   57  2  0   60   81    55 0.212   1.37
 6.00 Prom - 165797 165758   40                              -7.55

 7.08 PlyA - 166615 166610    6                               1.05
 7.07 Term - 167192 166918  275  0  2   29   46   252 0.982   9.75
 7.06 Intr - 167951 167816  136  2  1  115   36    39 0.549   0.62
 7.05 Intr - 168400 168339   62  2  2   81   75    47 0.318   0.23
 7.04 Intr - 176494 176295  200  0  2   64   89   118 0.411   7.57
 7.03 Intr - 179096 179006   91  0  1   68   81    51 0.121   0.53
 7.02 Intr - 182115 181932  184  0  1   79   37   108 0.276   3.24
 7.01 Intr - 202505 202390  116  0  2   38  100    86 0.008   4.05

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590r:94781635_94994121|GENSCAN_predicted_peptide_1|1048_aa
MIQSGGVLYVLPGDRHMGKDSEGAGGEVDLEEAGLRQAPVAAVFAGSPQLMGAIKLCTGW
MVTSLPLYNDDDLLKRNENIYQIYSKRSAEDIYKILTSYKANYLIVEDAICNEVGPMRGC
RVKDLLDIANGHEASGKLVFSAGRREHLRRGPRCEEISEMGTGKLKAQEINFAWVTTRTL
RFAFTKILRPVATLDEVVSFSRWRTVREHGKPTRDPASCGAVSYGNREEAWFEGTGPHPS
VRLEPGSGPGGSGGGGRMSAEAADREAATSSRPCTPPQTCWFEFLLEESLLEKHLRKPCP
DPAPVQLIVQFLEQASKPSVNEQNQVQPPPDNKRNRILKLLALKVAAHLKWDLDILEKRA
IRTIVQSSFPVKQAKPGPPQLSVMNQMQQEKELTENILKVLKEQAADSILVLEAALKLNK
DLYVHTMRTLDLLAMEPGMVNGETESSTAGLKVKTEEMQCQVCYDLGAAYFQQGSTNSAV
YENAREKFFRTKELIAEIGSLSLHCTIDEKRLAGYCQACDVLVPSSDSTSQQLTPYSQVH
ICLRSGNYQEVIQIFIEDNLTLSLPVQFRQSVLRELFKKAQQGNVCLGLEDLQYVFMISS
HELFITLLKDEERKLLVDQMRKRSPRVNLCIKPVTSFYDIPASASVNIGQLEHQLILSVD
PWRIRQILIELHGMTSERQFWTVSNKWEVPSVYSGVILGIKDNLTRDLVYILMAKGLHCS
TVKDFSHAKQLFAACLELVTEFSPKLRQVMLNEMLLLDIHTHEAGTGQAGERPPSDLISR
VRGYLEMRLPDIPLRQVIAEECVAFMLNWRENEYLTLQVPAFLLQSNPYVKLGQLLAATC
KELPGPKESRRTAKDLWEVVVQICSVSSQHKRGNDGRVSLIKQRESTLGIMYRYVLEPLV
LTIILSLFVKLHNVREDIVNDITAEHISIWPSSIPNLQSVDFEAVAITVKELVRYTLSIN
PNNHSWLIIQADIYFATNQYSAALHYYLQAGAVCSDFFNKAVPPDVYTDQIKAIGQTELN
ASNPEEVLQLAAQRRKKKFLQAMAKLYF

>gi568815590r:94781635_94994121|GENSCAN_predicted_CDS_1|3147_bp
atgattcagagtggaggagtcctatatgttctgcctggagacagacacatgggtaaagac
agtgaaggagcaggaggagaggtggatttggaagaagctgggttaaggcaagctccagtt
gcagctgtgtttgcagggagtccacagttaatgggtgcgattaaattatgcactggatgg
atggtgacaagtttgcctctttacaatgatgatgatcttctcaagagaaatgaaaatatc
taccaaatctattcaaagcgatctgctgaggatatttataaaatactgacatcttacaaa
gctaattacctaattgtagaggatgctatctgcaatgaggtgggacccatgagaggctgt
agggttaaagatttattagacattgcaaatggccacgaagcgagtgggaagctggtgttc
tcggcaggacggcgggagcatctgaggagaggacccaggtgcgaggaaatctcagaaatg
ggaacggggaaattgaaagcacaggagataaactttgcttgggtcacaactagaaccctt
cgcttcgcctttacgaaaatattgaggcccgttgcaaccctagatgaggttgtctcattt
tctcgctggagaactgtcagggaacacggaaaacccacccgcgacccggcttcatgcggc
gccgtctcctatggcaaccgggaggaggcgtggttcgaaggcaccggcccgcatccaagt
gtcaggttggagccgggaagcggccctggtggtagcggcggcgggggcaggatgagcgcg
gaggcggcggaccgggaggcggccacctccagccggccctgcaccccgccgcagacctgc
tggtttgagtttctgctggaggagtcactgttggagaaacatctgcgcaagccctgcccg
gatcctgcaccagttcaacttatagttcagtttttggaacaggcttccaaaccttcagtt
aatgaacaaaaccaagttcaacctccgcctgataacaagagaaatcgtattttaaaacta
cttgctcttaaagttgctgcacatttgaagtgggacttagacatattagagaaaagggca
attaggacaattgttcaaagtagttttccagtcaaacaggcaaaacccggaccccctcag
ttaagtgttatgaatcaaatgcaacaggaaaaagagctaacagaaaacattttgaaagtg
ctcaaagaacaagctgctgattctattttggtactagaagcagccctaaaattaaacaag
gatctttatgtccatacgatgagaactctagatttattggccatggaaccaggcatggta
aatggagaaactgagagttctactgctggattgaaagtcaaaaccgaagaaatgcagtgc
caggtgtgctatgatttgggcgcagcatacttccagcaaggctccacaaattcagctgtc
tatgaaaatgccagggaaaaattttttagaaccaaagaactaattgcagagataggttca
ttatctcttcattgtaccatagatgagaagcggttagctggctattgtcaagcatgtgat
gttcttgtaccttcttctgatagtacatctcaacagttgactccatatagtcaagtccat
atttgtttgagatctggcaactatcaggaggtaatacagattttcattgaagacaactta
accttgagtttacctgtccagttccgacagtcagtcctaagagaactctttaagaaagct
caacaggggaatgtgtgtctggggttggaagatctgcagtatgttttcatgatttcttca
catgagcttttcattacattgttgaaagatgaagaacgaaagctacttgttgatcagatg
aggaagagatcccctagagtaaatctgtgcattaaacctgtaacttcattttatgatatc
ccagcttcagcaagtgtcaacattggtcagttagagcatcaacttatattgtcagtggat
ccttggaggattagacaaattttaattgaattacatggtatgacttcagagcgccagttc
tggacagtgtctaataagtgggaagtaccttctgtctatagtggtgttatcctgggaatt
aaagacaatttaacaagagatttggtttatattcttatggccaaaggtttgcactgcagt
actgttaaggacttttcccatgctaaacagctctttgctgcttgtttggagttggtaaca
gagttctcaccgaagcttcgtcaggtcatgctgaatgagatgttgcttttggatattcat
acacacgaagctgggacagggcaggcaggagagagaccgccatccgaccttataagtaga
gtacgaggctatctggaaatgaggcttcctgatattcctcttcgtcaagttatagctgag
gaatgtgttgcctttatgttaaactggagagaaaatgaataccttacactccaagttcct
gcatttttgcttcagagtaatccatatgtaaagcttggacagcttttagcagctacatgc
aaagaacttccaggccctaaagaaagtagacggactgccaaagacctttgggaagttgtt
gttcaaatctgtagtgtgtccagtcagcacaaacgaggaaatgatggcagagttagttta
ataaaacagagggaatctacgttaggtatcatgtatcggtatgtattggaaccactcgtt
ttgactattattttatcactctttgtgaaacttcacaatgttcgggaggacattgtgaat
gatattacagctgaacacatttctatttggccatcttccattcccaacctccagtctgtg
gactttgaagctgtggcaatcacagtgaaagagctagttcgatatacactcagtataaat
ccaaataaccattcttggttaattatccaggcagatatttactttgcaacgaatcagtat
tcagcagctcttcactattacctccaggcaggagctgtgtgttctgacttctttaacaag
gctgtgccccctgatgtttatacagaccagatcaaagccatcggccagacagagttgaat
gcaagcaatccagaagaagtgttacagctggcagcgcagagaaggaaaaaaaagtttctc
caagcaatggcaaaactttacttttaa

>gi568815590r:94781635_94994121|GENSCAN_predicted_peptide_2|129_aa
MKLLDLCILAIDSLEFQYRILTAAALCHFTSIEVVKKASGLEWDSISECVDWMVPFVNVV
KSTSPVKLKTFKKIPMEDRHNIQTHTNYLAMLEEVNYINTFRKGGQLSPVCNGGIMTPPK
STEKPPGKH

>gi568815590r:94781635_94994121|GENSCAN_predicted_CDS_2|390_bp
atgaagcttttagatctgtgtattctagccattgattcattagagttccagtacagaata
ctgactgctgctgccttgtgccattttacctccattgaagtggttaagaaagcctcaggt
ttggagtgggacagtatttcagaatgtgtagattggatggtaccttttgtcaatgtagta
aaaagtactagtccagtgaagctgaagacttttaagaagattcctatggaagacagacat
aatatccagacacatacaaactatttggctatgctggaggaagtaaattacataaacacc
ttcagaaaagggggacagttgtcaccagtgtgcaatggaggcattatgacaccaccgaag
agcactgaaaaaccaccaggaaaacactaa

>gi568815590r:94781635_94994121|GENSCAN_predicted_peptide_3|91_aa
MLKNAESNAELKSLDVDSLVIEHLQVNKAPTMCQRTYRAHGRINSHVISPCHIEMIFSEK
EQIVPKPEEAVAQKKKISQKKLKKQKLMAQE

>gi568815590r:94781635_94994121|GENSCAN_predicted_CDS_3|276_bp
atgcttaaaaatgcagagagtaatgctgaacttaagagtttagatgtagattctctggtc
attgagcatctccaagtgaacaaagcacctacgatgtgccaacggacctacagagctcat
ggtcggattaactcacacgtgatctctccctgccacatcgaaatgatctttagtgaaaag
gaacaaattgttcctaaaccagaagaggcggttgcccagaagaaaaagatatcccagaag
aaactgaagaaacaaaaacttatggcacaggagtaa

>gi568815590r:94781635_94994121|GENSCAN_predicted_peptide_4|329_aa
MCCRISIHSPQRDHEHKEASTNILARTTKVDPRLKPGHSLCSVSACPLVLQMGGPPGAIG
NTRNCTAVQLVVDPSHPQGNSTPRGEDSPWMRTTMSRTKKEEGKNTRRGRRKSPECLEGT
QVALGSAASKRQRSTLVGRGRMPPNQWLGKDQGSSGLVETHPRNTNVTDIAEAYYKLPPN
PRCHCPEIDGYFGEARFYAITAAWADAARPSYRGFRDAFALLLHPGDLCSRSCSPPRCSR
RKTCLRNTRRKSDLTMCSFGEGGGTWGRCPSPTPGVRGRGWRTQKNPFEEDVPPCAFKVS
GVLGKFLDTRVPAVHSVEEMQACIQNELP

>gi568815590r:94781635_94994121|GENSCAN_predicted_CDS_4|990_bp
atgtgctgcagaatatcaattcacagcccccagagggaccatgagcataaagaggcttcc
actaatattcttgcacgaaccaccaaggtggatccacgacttaaaccaggacactccctc
tgctctgtgtcagcatgtcctttagtgctgcagatgggaggtcccccaggtgccatagga
aacaccagaaactgcacagcagtccagctggtggtggatcccagccatccccagggaaat
tcaaccccaagaggagaagactcaccctggatgagaaccactatgagcaggaccaagaag
gaagagggcaagaacactaggagaggaagaaggaaatcaccagagtgcctagagggcacc
caggtagctttgggaagtgcagcttccaagagacagaggagtaccttggtaggaaggggc
aggatgcctccgaatcagtggctggggaaggaccagggaagctctgggcttgttgaaacc
cacccaagaaatacaaatgttacagatatagctgaagcctattataaactccccccgaac
ccaagatgccactgtcctgaaattgatggctactttggtgaagcacgcttttatgctatt
actgcggcctgggcagacgcggcccgcccgagctaccgcgggttccgagacgccttcgca
ctgctcctccacccgggggatctttgttcccggagctgttccccgcctcgctgctcccgc
cgcaaaacctgtttgcggaatacccgccgcaagtctgacttgacgatgtgcagttttggg
gagggaggcgggacgtgggggcgctgcccaagccccactcccggtgtacgggggagaggg
tggaggacccagaaaaacccgtttgaggaagatgtgcctccctgcgcgttcaaggtgtca
ggagtgcttggtaaatttttggacactcgcgttccagctgtacattcagttgaggaaatg
caggcttgtatccaaaatgaattaccatga

>gi568815590r:94781635_94994121|GENSCAN_predicted_peptide_5|113_aa
MGIKGFHFFGGSAAAECRTLNERQLRDAHREWLATQPMQDIDLFPGDRIVMFSATRGFQC
GLGGVAITLEGLEHPLCPWDGTTVAKTSGQIQRYVFLVALKMTEQIMGTAQNE

>gi568815590r:94781635_94994121|GENSCAN_predicted_CDS_5|342_bp
atgggaattaaaggctttcatttcttcggaggctcagctgcagctgaatgcagaacccta
aatgagaggcagctgcgggatgctcatagagaatggctggcaacacagcctatgcaggat
attgacctgtttccaggagacaggatagtaatgttcagtgccaccagggggttccagtgt
ggcctgggaggagtggctatcactctagagggcttggagcatcctctctgtccctgggat
ggaacaacagtagccaaaacaagtgggcagattcaacgctatgtattcctggtagctctg
aaaatgacagagcaaatcatgggaactgcacaaaatgaatga

>gi568815590r:94781635_94994121|GENSCAN_predicted_peptide_6|370_aa
MKDELLPHLAGLLSTLSPKRLNKMFVGEVSSSSNQEPEFNEKEDDEWILVDFIDTCTGFS
AEEEEEEEDISEESPTEHPSVFSCLPASLECLADTSDSCFLQFESCPMEESWFITPPPCF
TAGGLTTIKVETSPMENLLIEHPSMSVYAVHNSCPGLSEATRGTDELHSPSSPRKTACSS
AHRADLFLPSLIKVASFQTRCCLFTLELPSTTKQLFVSQLRAIGSVESSSSHSSRVSPRV
EAQNEMGQHIHCYVAALAAHTTFLEQPKSFRPSQWIKEHSERQPLNRNSLRRQNLTRDCH
PRQVKHNGWVVHQPCPHSHLHDFGHSHGRMSTFNRFSFRHACSANLQLQVNLNARLASTF
ELPKSNWKKK

>gi568815590r:94781635_94994121|GENSCAN_predicted_CDS_6|1113_bp
atgaaggatgagctcctccctcacttggctgggcttctgagcactctgtcgcccaagagg
ctgaataaaatgtttgtgggtgaagtcagttcttcctccaaccaagaaccagaattcaat
gagaaagaagatgatgaatggattcttgttgacttcatagatacttgcactggtttctca
gcagaagaagaagaagaagaggaggacatcagtgaagagtcacctactgagcacccttca
gtcttttcctgtttaccggcatctcttgagtgcttggctgatacaagtgattcctgcttt
ctccagtttgagtcatgtccaatggaggagagctggtttatcaccccacccccatgtttt
actgcaggtggattaaccactatcaaggtggaaacaagtcctatggaaaaccttctcatt
gaacatcccagcatgtctgtctatgctgtgcataactcctgccctggtctcagtgaggcc
acccgtgggactgatgaattacatagcccaagtagtcccaggaaaacagcgtgcagttca
gcccacagagccgatttgtttttaccttctttgatcaaagtagcatccttccaaacaaga
tgctgtctgttcacgttggaactgccatccacaaccaagcagctctttgtcagtcagttg
agagctattggcagtgtggaatccagctcctcacacagttccagagtcagtccaagagtg
gaagctcaaaatgaaatggggcagcatattcattgttatgttgcagctcttgctgctcat
acaacttttctggaacaacccaagagctttcgcccttcccagtggataaaagaacacagt
gaaagacagcctcttaacagaaatagccttcgtcgccaaaatcttaccagggattgccac
cctcggcaagtcaagcacaatggctgggttgttcatcagccctgcccgcactcccatctg
cacgattttggccattctcatggtcgcatgtcaactttcaatcgtttctctttccgacat
gcctgttctgctaacctccaactacaagtcaatctgaatgcaaggcttgcttctacattt
gagctgcctaagagcaactggaaaaaaaaatga

>gi568815590r:94781635_94994121|GENSCAN_predicted_peptide_7|354_aa
XPLVSASARKELGSPFYLNSNYKAGQAEKSTTLLAPVRKTCCHGYLPTFTISHLVLWTFE
FPEVGSAGSLGFGILYYLVRCLATALVPTRLQLSQPLALKGGFHERKEDINIHGLKTNTL
EDTEMEHLAESQDSMATNHSSRTACAEVTTDHHLLCWTPADSSRAGTMSERPKKRPGDNK
RDIGFVGWIYKQGWSNGGRRNPERAASPAGSRWRFLQQAFTLSSRFLLPGLVSELSAPPA
GRQVTCVGDNLSQGGPGAPAPPIAWLVFLAAAGPPPLTPPHSPPLLLLRLLSAVGWGRPF
GTRRRGSRGHPRDASPKTAALGLVARRSVPALRSRPLRLPSEFRRPCGYGEPAP

>gi568815590r:94781635_94994121|GENSCAN_predicted_CDS_7|1065_bp
ngacctctggtttctgcttctgcacgtaaggagcttggaagtccattctatcttaacagc
aactacaaagctggacaggctgaaaaatcaacaactcttcttgcacctgtaagaaagacc
tgctgtcatgggtatttgccaaccttcacaatttcccacctggttctttggacttttgag
tttcctgaagttggctctgcaggcagcttgggttttggaatcctctattacctagttaga
tgtctggctacggcccttgttccaacccgtctccagctgagccagcctctggccctcaag
ggtggtttccatgagaggaaagaggacataaacatacatggtctcaaaacaaacactttg
gaggatactgaaatggagcatttagcagaaagtcaggactccatggccaccaaccactcc
tcacgaactgcctgtgccgaagtcaccactgaccaccatctgttgtgctggactcctgct
gactccagtagggctggcaccatgtcagaaaggccgaagaagagacctggagacaacaaa
cgagacatagggtttgttggatggatttacaaacagggatggtccaatggcggcaggcgg
aatccagagcgtgcagcaagcccggccggctctcggtggcggtttctacagcaggccttc
acgctcagctcccggtttttgttgcccgggcttgtttcggagctgagcgcgccgccggcc
gggcgccaggtcacgtgcgttggtgacaacctctcgcagggcggccccggggcccccgca
ccgccgattgcgtggcttgttttcttggccgcggcgggacctcctcctctcacccctcct
cactcccctccactcctcctcctccgcctgctctcggccgttggatggggccgccccttc
gggactcggcgtcggggctcccgcggccacccccgggacgcatctccgaagacagcggcg
cttgggcttgtggcccggcgctctgtccccgccctgcgatcccgtcccctgcgcctgccc
tccgagttccggaggccctgcggctatggggaacctgctccgtga