Result of FASTA (omim) for pF1KE1842
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE1842, 358 aa
  1>>>pF1KE1842 358 - 358 aa - 358 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 11.4511+/-0.000382; mu= -8.1739+/- 0.024
 mean_var=471.1586+/-100.524, 0's: 0 Z-trim(126.6): 15  B-trim: 2683 in 2/57
 Lambda= 0.059087
 statistics sampled from 52916 (52942) to 52916 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.852), E-opt: 0.2 (0.621), width:  16
 Scan time:  9.970

The best scores are:                                      opt bits E(85289)
NP_004355 (OMIM: 116897,601626) CCAAT/enhancer-bin ( 358) 2526 228.8 1.5e-59
NP_001274353 (OMIM: 116897,601626) CCAAT/enhancer- ( 393) 2526 228.8 1.6e-59
NP_001274364 (OMIM: 116897,601626) CCAAT/enhancer- ( 344) 2425 220.1 5.6e-57
NP_001272758 (OMIM: 116897,601626) CCAAT/enhancer- ( 239) 1677 156.2 6.9e-38
NP_001272807 (OMIM: 189965) CCAAT/enhancer-binding ( 322)  462 52.8 1.3e-06
NP_005185 (OMIM: 189965) CCAAT/enhancer-binding pr ( 345)  462 52.8 1.3e-06
NP_001272808 (OMIM: 189965) CCAAT/enhancer-binding ( 147)  412 48.2 1.4e-05
NP_001796 (OMIM: 245480,600749) CCAAT/enhancer-bin ( 281)  412 48.5 2.2e-05
NP_005186 (OMIM: 116898) CCAAT/enhancer-binding pr ( 269)  361 44.1 0.00044


>>NP_004355 (OMIM: 116897,601626) CCAAT/enhancer-binding  (358 aa)
 initn: 2526 init1: 2526 opt: 2526  Z-score: 1190.2  bits: 228.8 E(85289): 1.5e-59
Smith-Waterman score: 2526; 100.0% identity (100.0% similar) in 358 aa overlap (1-358:1-358)

               10        20        30        40        50        60
pF1KE1 MESADFYEAEPRPPMSSHLQSPPHAPSSAAFGFPRGAGPAQPPAPPAAPEPLGGICEHET
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MESADFYEAEPRPPMSSHLQSPPHAPSSAAFGFPRGAGPAQPPAPPAAPEPLGGICEHET
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 SIDISAYIDPAAFNDEFLADLFQHSRQQEKAKAAVGPTGGGGGGDFDYPGAPAGPGGAVM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 SIDISAYIDPAAFNDEFLADLFQHSRQQEKAKAAVGPTGGGGGGDFDYPGAPAGPGGAVM
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 PGGAHGPPPGYGCAAAGYLDGRLEPLYERVGAPALRPLVIKQEPREEDEAKQLALAGLFP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 PGGAHGPPPGYGCAAAGYLDGRLEPLYERVGAPALRPLVIKQEPREEDEAKQLALAGLFP
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE1 YQPPPPPPPSHPHPHPPPAHLAAPHLQFQIAHCGQTTMHLQPGHPTPPPTPVPSPHPAPA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 YQPPPPPPPSHPHPHPPPAHLAAPHLQFQIAHCGQTTMHLQPGHPTPPPTPVPSPHPAPA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE1 LGAAGLPGPGSALKGLGAAHPDLRASGGSGAGKAKKSVDKNSNEYRVRRERNNIAVRKSR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 LGAAGLPGPGSALKGLGAAHPDLRASGGSGAGKAKKSVDKNSNEYRVRRERNNIAVRKSR
              250       260       270       280       290       300

              310       320       330       340       350        
pF1KE1 DKAKQRNVETQQKVLELTSDNDRLRKRVEQLSRELDTLRGIFRQLPESSLVKAMGNCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 DKAKQRNVETQQKVLELTSDNDRLRKRVEQLSRELDTLRGIFRQLPESSLVKAMGNCA
              310       320       330       340       350        

>>NP_001274353 (OMIM: 116897,601626) CCAAT/enhancer-bind  (393 aa)
 initn: 2526 init1: 2526 opt: 2526  Z-score: 1189.7  bits: 228.8 E(85289): 1.6e-59
Smith-Waterman score: 2526; 100.0% identity (100.0% similar) in 358 aa overlap (1-358:36-393)

                                             10        20        30
pF1KE1                               MESADFYEAEPRPPMSSHLQSPPHAPSSAA
                                     ::::::::::::::::::::::::::::::
NP_001 RAGSPGGRRRRPAQAGGRRGSPCRENSNSPMESADFYEAEPRPPMSSHLQSPPHAPSSAA
          10        20        30        40        50        60     

               40        50        60        70        80        90
pF1KE1 FGFPRGAGPAQPPAPPAAPEPLGGICEHETSIDISAYIDPAAFNDEFLADLFQHSRQQEK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FGFPRGAGPAQPPAPPAAPEPLGGICEHETSIDISAYIDPAAFNDEFLADLFQHSRQQEK
          70        80        90       100       110       120     

              100       110       120       130       140       150
pF1KE1 AKAAVGPTGGGGGGDFDYPGAPAGPGGAVMPGGAHGPPPGYGCAAAGYLDGRLEPLYERV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AKAAVGPTGGGGGGDFDYPGAPAGPGGAVMPGGAHGPPPGYGCAAAGYLDGRLEPLYERV
         130       140       150       160       170       180     

              160       170       180       190       200       210
pF1KE1 GAPALRPLVIKQEPREEDEAKQLALAGLFPYQPPPPPPPSHPHPHPPPAHLAAPHLQFQI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GAPALRPLVIKQEPREEDEAKQLALAGLFPYQPPPPPPPSHPHPHPPPAHLAAPHLQFQI
         190       200       210       220       230       240     

              220       230       240       250       260       270
pF1KE1 AHCGQTTMHLQPGHPTPPPTPVPSPHPAPALGAAGLPGPGSALKGLGAAHPDLRASGGSG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AHCGQTTMHLQPGHPTPPPTPVPSPHPAPALGAAGLPGPGSALKGLGAAHPDLRASGGSG
         250       260       270       280       290       300     

              280       290       300       310       320       330
pF1KE1 AGKAKKSVDKNSNEYRVRRERNNIAVRKSRDKAKQRNVETQQKVLELTSDNDRLRKRVEQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AGKAKKSVDKNSNEYRVRRERNNIAVRKSRDKAKQRNVETQQKVLELTSDNDRLRKRVEQ
         310       320       330       340       350       360     

              340       350        
pF1KE1 LSRELDTLRGIFRQLPESSLVKAMGNCA
       ::::::::::::::::::::::::::::
NP_001 LSRELDTLRGIFRQLPESSLVKAMGNCA
         370       380       390   

>>NP_001274364 (OMIM: 116897,601626) CCAAT/enhancer-bind  (344 aa)
 initn: 2425 init1: 2425 opt: 2425  Z-score: 1143.9  bits: 220.1 E(85289): 5.6e-57
Smith-Waterman score: 2425; 100.0% identity (100.0% similar) in 344 aa overlap (15-358:1-344)

               10        20        30        40        50        60
pF1KE1 MESADFYEAEPRPPMSSHLQSPPHAPSSAAFGFPRGAGPAQPPAPPAAPEPLGGICEHET
                     ::::::::::::::::::::::::::::::::::::::::::::::
NP_001               MSSHLQSPPHAPSSAAFGFPRGAGPAQPPAPPAAPEPLGGICEHET
                             10        20        30        40      

               70        80        90       100       110       120
pF1KE1 SIDISAYIDPAAFNDEFLADLFQHSRQQEKAKAAVGPTGGGGGGDFDYPGAPAGPGGAVM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SIDISAYIDPAAFNDEFLADLFQHSRQQEKAKAAVGPTGGGGGGDFDYPGAPAGPGGAVM
         50        60        70        80        90       100      

              130       140       150       160       170       180
pF1KE1 PGGAHGPPPGYGCAAAGYLDGRLEPLYERVGAPALRPLVIKQEPREEDEAKQLALAGLFP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PGGAHGPPPGYGCAAAGYLDGRLEPLYERVGAPALRPLVIKQEPREEDEAKQLALAGLFP
        110       120       130       140       150       160      

              190       200       210       220       230       240
pF1KE1 YQPPPPPPPSHPHPHPPPAHLAAPHLQFQIAHCGQTTMHLQPGHPTPPPTPVPSPHPAPA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YQPPPPPPPSHPHPHPPPAHLAAPHLQFQIAHCGQTTMHLQPGHPTPPPTPVPSPHPAPA
        170       180       190       200       210       220      

              250       260       270       280       290       300
pF1KE1 LGAAGLPGPGSALKGLGAAHPDLRASGGSGAGKAKKSVDKNSNEYRVRRERNNIAVRKSR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LGAAGLPGPGSALKGLGAAHPDLRASGGSGAGKAKKSVDKNSNEYRVRRERNNIAVRKSR
        230       240       250       260       270       280      

              310       320       330       340       350        
pF1KE1 DKAKQRNVETQQKVLELTSDNDRLRKRVEQLSRELDTLRGIFRQLPESSLVKAMGNCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DKAKQRNVETQQKVLELTSDNDRLRKRVEQLSRELDTLRGIFRQLPESSLVKAMGNCA
        290       300       310       320       330       340    

>>NP_001272758 (OMIM: 116897,601626) CCAAT/enhancer-bind  (239 aa)
 initn: 1677 init1: 1677 opt: 1677  Z-score: 801.2  bits: 156.2 E(85289): 6.9e-38
Smith-Waterman score: 1677; 100.0% identity (100.0% similar) in 239 aa overlap (120-358:1-239)

      90       100       110       120       130       140         
pF1KE1 KAKAAVGPTGGGGGGDFDYPGAPAGPGGAVMPGGAHGPPPGYGCAAAGYLDGRLEPLYER
                                     ::::::::::::::::::::::::::::::
NP_001                               MPGGAHGPPPGYGCAAAGYLDGRLEPLYER
                                             10        20        30

     150       160       170       180       190       200         
pF1KE1 VGAPALRPLVIKQEPREEDEAKQLALAGLFPYQPPPPPPPSHPHPHPPPAHLAAPHLQFQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VGAPALRPLVIKQEPREEDEAKQLALAGLFPYQPPPPPPPSHPHPHPPPAHLAAPHLQFQ
               40        50        60        70        80        90

     210       220       230       240       250       260         
pF1KE1 IAHCGQTTMHLQPGHPTPPPTPVPSPHPAPALGAAGLPGPGSALKGLGAAHPDLRASGGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IAHCGQTTMHLQPGHPTPPPTPVPSPHPAPALGAAGLPGPGSALKGLGAAHPDLRASGGS
              100       110       120       130       140       150

     270       280       290       300       310       320         
pF1KE1 GAGKAKKSVDKNSNEYRVRRERNNIAVRKSRDKAKQRNVETQQKVLELTSDNDRLRKRVE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GAGKAKKSVDKNSNEYRVRRERNNIAVRKSRDKAKQRNVETQQKVLELTSDNDRLRKRVE
              160       170       180       190       200       210

     330       340       350        
pF1KE1 QLSRELDTLRGIFRQLPESSLVKAMGNCA
       :::::::::::::::::::::::::::::
NP_001 QLSRELDTLRGIFRQLPESSLVKAMGNCA
              220       230         

>>NP_001272807 (OMIM: 189965) CCAAT/enhancer-binding pro  (322 aa)
 initn: 597 init1: 385 opt: 462  Z-score: 239.9  bits: 52.8 E(85289): 1.3e-06
Smith-Waterman score: 529; 37.6% identity (54.0% similar) in 359 aa overlap (28-357:14-322)

               10        20        30        40        50          
pF1KE1 MESADFYEAEPRPPMSSHLQSPPHAPSSAAFGFPRGAGPAQPPAPPAAPEP----LGGIC
                                  .::.:    :.:: :::   .:.:    ::.: 
NP_001               MEVANFYYEADCLAAAYGGK--AAPAAPPAARPGPRPPAGELGSIG
                             10        20          30        40    

         60        70            80        90       100       110  
pF1KE1 EHETSIDISAYIDP----AAFNDEFLADLFQHSRQQEKAKAAVGPTGGGGGGDFDYPGAP
       .:: .::.: :..:     :      .: :      : :  : .:. ...:   :. .  
NP_001 DHERAIDFSPYLEPLGAPQAPAPATATDTF------EAAPPAPAPAPASSGQHHDFLSDL
           50        60        70              80        90        

            120       130       140        150       160       170 
pF1KE1 AGPGGAVMPGGAHGPPPGYGCAAAGYLD-GRLEPLYERVGAPALRPLVIKQEPREEDEAK
        .       :: .   :    :  ::.. :::       ::                 ::
NP_001 FSDDY----GGKNCKKP----AEYGYVSLGRL-------GA-----------------AK
      100           110           120                              

              180       190       200       210       220       230
pF1KE1 QLALAGLF-PYQPPPPPPPSHPHPHPPPAHLAAPHLQFQIAHCGQTTMHLQPGHPTPPPT
            : : : .:::::::       :::.: :    :. : : .      ::  .   .
NP_001 GALHPGCFAPLHPPPPPPP-------PPAELKAEP-GFEPADCKRKEEAGAPGGGAGMAA
        130       140              150        160       170        

              240                     250       260       270      
pF1KE1 PVPSPHPAPALGAAGLPG--------------PGSALKGLGAAHPDLRASGGSGA-----
         :    :  ::  ..:.              ::.   . . : :    .:.. :     
NP_001 GFPYALRA-YLGYQAVPSGSSGSLSTSSSSSPPGTPSPADAKAPPTACYAGAAPAPSQVK
      180        190       200       210       220       230       

             280       290       300       310       320       330 
pF1KE1 GKAKKSVDKNSNEYRVRRERNNIAVRKSRDKAKQRNVETQQKVLELTSDNDRLRKRVEQL
       .::::.:::.:.::..:::::::::::::::::.::.:::.::::::..:.::.:.::::
NP_001 SKAKKTVDKHSDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQL
       240       250       260       270       280       290       

             340       350        
pF1KE1 SRELDTLRGIFRQLPESSLVKAMGNCA
       ::::.:::..:.::::  :. . :.: 
NP_001 SRELSTLRNLFKQLPEP-LLASSGHC 
       300       310        320   

>>NP_005185 (OMIM: 189965) CCAAT/enhancer-binding protei  (345 aa)
 initn: 597 init1: 385 opt: 462  Z-score: 239.5  bits: 52.8 E(85289): 1.3e-06
Smith-Waterman score: 530; 36.1% identity (53.0% similar) in 379 aa overlap (11-357:16-345)

                    10        20        30        40           50  
pF1KE1      MESADFYEAEPRPPMSSHLQSPPHAPSSAAFGFPRGAGPAQPPAPPAA---PEP-
                      : ::  . ..       .  ..   : : : : :::::   :.: 
NP_005 MQRLVAWDPACLPLPPPPPAFKSMEVANFYYEADCLAAAYG-GKAAPAAPPAARPGPRPP
               10        20        30        40         50         

                 60        70            80        90       100    
pF1KE1 ---LGGICEHETSIDISAYIDP----AAFNDEFLADLFQHSRQQEKAKAAVGPTGGGGGG
          ::.: .:: .::.: :..:     :      .: :      : :  : .:. ...: 
NP_005 AGELGSIGDHERAIDFSPYLEPLGAPQAPAPATATDTF------EAAPPAPAPAPASSGQ
      60        70        80        90             100       110   

          110       120       130       140        150       160   
pF1KE1 DFDYPGAPAGPGGAVMPGGAHGPPPGYGCAAAGYLD-GRLEPLYERVGAPALRPLVIKQE
         :. .   .       :: .   :    :  ::.. :::      ..  ::.:      
NP_005 HHDFLSDLFSDDY----GGKNCKKP----AEYGYVSLGRLG-----AAKGALHP------
           120           130           140            150          

           170        180       190       200       210       220  
pF1KE1 PREEDEAKQLALAGLF-PYQPPPPPPPSHPHPHPPPAHLAAPHLQFQIAHCGQTTMHLQP
                    : : : .:::::::       :::.: :    :. : : .      :
NP_005 -------------GCFAPLHPPPPPPP-------PPAELKAEP-GFEPADCKRKEEAGAP
                       160              170        180       190   

            230       240                     250       260        
pF1KE1 GHPTPPPTPVPSPHPAPALGAAGLPG--------------PGSALKGLGAAHPDLRASGG
       :  .   .  :    :  ::  ..:.              ::.   . . : :    .:.
NP_005 GGGAGMAAGFPYALRA-YLGYQAVPSGSSGSLSTSSSSSPPGTPSPADAKAPPTACYAGA
           200        210       220       230       240       250  

      270            280       290       300       310       320   
pF1KE1 SGA-----GKAKKSVDKNSNEYRVRRERNNIAVRKSRDKAKQRNVETQQKVLELTSDNDR
       . :     .::::.:::.:.::..:::::::::::::::::.::.:::.::::::..:.:
NP_005 APAPSQVKSKAKKTVDKHSDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENER
            260       270       280       290       300       310  

           330       340       350        
pF1KE1 LRKRVEQLSRELDTLRGIFRQLPESSLVKAMGNCA
       :.:.::::::::.:::..:.::::  :. . :.: 
NP_005 LQKKVEQLSRELSTLRNLFKQLPEP-LLASSGHC 
            320       330        340      

>>NP_001272808 (OMIM: 189965) CCAAT/enhancer-binding pro  (147 aa)
 initn: 492 init1: 385 opt: 412  Z-score: 221.0  bits: 48.2 E(85289): 1.4e-05
Smith-Waterman score: 427; 48.1% identity (69.4% similar) in 160 aa overlap (198-357:6-147)

       170       180       190       200       210       220       
pF1KE1 DEAKQLALAGLFPYQPPPPPPPSHPHPHPPPAHLAAPHLQFQIAHCGQTTMHLQPGHPTP
                                     :  : : .: .: .  :..      .  .:
NP_001                          MAAGFPYALRA-YLGYQAVPSGSSGSLSTSSSSSP
                                        10         20        30    

       230       240       250       260       270       280       
pF1KE1 PPTPVPSPHPAPALGAAGLPGPGSALKGLGAAHPDLRASGGSGAGKAKKSVDKNSNEYRV
       : :: :.   ::         : .   : . :  ....       ::::.:::.:.::..
NP_001 PGTPSPADAKAP---------PTACYAGAAPAPSQVKS-------KAKKTVDKHSDEYKI
           40                 50        60               70        

       290       300       310       320       330       340       
pF1KE1 RRERNNIAVRKSRDKAKQRNVETQQKVLELTSDNDRLRKRVEQLSRELDTLRGIFRQLPE
       :::::::::::::::::.::.:::.::::::..:.::.:.::::::::.:::..:.::::
NP_001 RRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQLSRELSTLRNLFKQLPE
       80        90       100       110       120       130        

       350        
pF1KE1 SSLVKAMGNCA
         :. . :.: 
NP_001 P-LLASSGHC 
       140        

>>NP_001796 (OMIM: 245480,600749) CCAAT/enhancer-binding  (281 aa)
 initn: 571 init1: 352 opt: 412  Z-score: 217.5  bits: 48.5 E(85289): 2.2e-05
Smith-Waterman score: 580; 40.7% identity (59.3% similar) in 332 aa overlap (34-358:11-281)

            10        20        30         40        50        60  
pF1KE1 ADFYEAEPRPPMSSHLQSPPHAPSSAAFGFPRGAG-PAQPPAPPAAPEPLGGICEHETSI
                                     :::.  : .  .  :.:  :: .::::.::
NP_001                     MSHGTYYECEPRGGQQPLEFSGGRAGPGELGDMCEHEASI
                                   10        20        30        40

             70        80        90       100       110       120  
pF1KE1 DISAYIDPAAFNDEFLADLFQHSRQQEKAKAAVGPTGGGGGGDFDYPGAPAGPGGAVMPG
       :.::::. .  ....:.:::           :: :.  . :  .  ::.:: :    .: 
NP_001 DLSAYIESG--EEQLLSDLF-----------AVKPAPEARG--LKGPGTPAFPH--YLPP
                 50                   60          70          80   

               130       140       150       160       170         
pF1KE1 GAHG---PPPGYGCAAAGYLDGRLEPLYERVGAPALRPLVIKQEPREEDEAKQLALAGLF
         .    ::  .:    .   :    .:   :.   : ...:.:::   :... :  :  
NP_001 DPRPFAYPPHTFGPDRKALGPG----IYSSPGSYDPRAVAVKEEPRGP-EGSRAASRG--
            90       100           110       120        130        

     180       190       200       210       220        230        
pF1KE1 PYQPPPPPPPSHPHPHPPPAHLAAPHLQFQIAHCGQTTMHLQPGHPTP-PPTPVPSPHPA
        :.:                      ::.:.::::::.::: :   .:  :  :     :
NP_001 SYNP----------------------LQYQVAHCGQTAMHLPPTLAAPGQPLRV---LKA
        140                             150       160          170 

      240       250       260       270        280       290       
pF1KE1 PALGAAGLPGPGSALKGLGAAHPDLRASGGSGA-GKAKKSVDKNSNEYRVRRERNNIAVR
       :   ::  : : :         : :.: . .:   :.::.:.:.: :::.::::::::::
NP_001 PLATAA--P-PCS---------PLLKAPSPAGPLHKGKKAVNKDSLEYRLRRERNNIAVR
                180                190       200       210         

       300       310       320       330       340        350      
pF1KE1 KSRDKAKQRNVETQQKVLELTSDNDRLRKRVEQLSRELDTLRGIFRQLPESS-LVKAMGN
       :::::::.: .::::::::  ..:.:::.:::::..::::::..:::.::.. :.:..:.
NP_001 KSRDKAKRRILETQQKVLEYMAENERLRSRVEQLTQELDTLRNLFRQIPEAANLIKGVGG
     220       230       240       250       260       270         

         
pF1KE1 CA
       :.
NP_001 CS
     280 

>>NP_005186 (OMIM: 116898) CCAAT/enhancer-binding protei  (269 aa)
 initn: 484 init1: 293 opt: 361  Z-score: 194.3  bits: 44.1 E(85289): 0.00044
Smith-Waterman score: 425; 38.1% identity (55.9% similar) in 270 aa overlap (106-357:24-268)

          80        90       100       110       120       130     
pF1KE1 EFLADLFQHSRQQEKAKAAVGPTGGGGGGDFDYPGAPAGPGGAVMPGGAHGPPPGYGCAA
                                     :  ::  . :: .. :: : : :   : ::
NP_005        MSAALFSLDGPARGAPWPAEPAPFYEPGRAGKPGRGAEPG-ALGEP---GAAA
                      10        20        30        40             

          140       150        160       170             180       
pF1KE1 -AGYLDGRLEPLYERVGAPALRP-LVIKQEPREEDEAKQLALAG------LFPYQPPPP-
        : : :     .   . . :  : : . ..    :  ..   ::      :.:  :  : 
NP_005 PAMYDDESAIDFSAYIDSMAAVPTLELCHDELFADLFNSNHKAGGAGPLELLPGGPARPL
      50        60        70        80        90       100         

         190          200         210       220        230         
pF1KE1 -PPPSHPH---PHPPPAHLAAPH--LQFQIAHCGQTTMHLQP-GHPTPPPTPVPSPHPAP
        : :. :.    .:  .   ::   :  :.: :.::.. :   :.:::: .: : :. .:
NP_005 GPGPAAPRLLKREPDWGDGDAPGSLLPAQVAACAQTVVSLAAAGQPTPPTSPEP-PRSSP
     110       120       130       140       150       160         

     240       250       260       270       280       290         
pF1KE1 ALGAAGLPGPGSALKGLGAAHPDLRASGGSGAGKAKKSVDKNSNEYRVRRERNNIAVRKS
              :.::          :  . :.:      :.. :..: ::: ::::::::::::
NP_005 RQ----TPAPG----------PAREKSAG------KRGPDRGSPEYRQRRERNNIAVRKS
      170                     180             190       200        

     300       310       320       330       340       350         
pF1KE1 RDKAKQRNVETQQKVLELTSDNDRLRKRVEQLSRELDTLRGIFRQLPESSLVKAMG--NC
       :::::.:: : :::..::...:..:..:::::.:.:  :: .:.:::   .. : :  .:
NP_005 RDKAKRRNQEMQQKLVELSAENEKLHQRVEQLTRDLAGLRQFFKQLPSPPFLPAAGTADC
      210       220       230       240       250       260        

        
pF1KE1 A
        
NP_005 R
        




358 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 21:58:39 2016 done: Sun Nov  6 21:58:40 2016
 Total Scan time:  9.970 Total Display time:  0.030

Function used was FASTA [36.3.4 Apr, 2011]
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