GENSCAN 1.0	Date run:  6-Nov-116	Time: 22:05:10

Sequence gi568815579r:50052612_50263194 : 210583 bp : 48.82% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.23 PlyA -   2316   2311    6                               1.05
 1.22 Term -   7388   6105 1284  2  0   59   42  1657 0.968 149.80
 1.21 Intr -   7981   7869  113  2  2   76   75    93 0.953   6.90
 1.20 Intr -  13773  13675   99  1  0   97   94    43 0.736   5.88
 1.19 Intr -  19749  19588  162  1  0  115   95     2 0.216   3.55
 1.18 Intr -  24351  24167  185  2  2   91   28    67 0.013   0.43
 1.17 Intr -  41001  40810  192  2  0   81   53   112 0.066   5.61
 1.16 Intr -  55536  55345  192  2  0   81   53   112 0.318   5.61
 1.15 Intr -  60890  60699  192  1  0   81   53   112 0.395   5.61
 1.14 Intr -  66240  66049  192  2  0   81   53   112 0.363   5.61
 1.13 Intr -  71592  71401  192  2  0   81   50   112 0.323   5.31
 1.12 Intr -  76927  76736  192  0  0   81   50   112 0.456   5.31
 1.11 Intr -  81377  81204  174  1  0  107   61    27 0.486   0.95
 1.10 Intr -  82261  82070  192  0  0   89   53   112 0.172   6.41
 1.09 Intr -  86750  86577  174  1  0  107   61    49 0.045   3.15
 1.08 Intr -  90330  90284   47  0  2   64  -14   109 0.021  -4.49
 1.07 Intr -  91469  91416   54  2  0    6  109    70 0.131   0.08
 1.06 Intr -  95651  95522  130  1  1   18   94   136 0.084   7.90
 1.05 Intr - 102115 101989  127  2  1   44   80   244 0.738  18.94
 1.04 Intr - 105737 105657   81  0  0   90   99    40 0.956   4.91
 1.03 Intr - 106969 106883   87  2  0  113   56    62 0.975   5.44
 1.02 Intr - 110202 110128   75  1  0  122   97    59 0.995   9.69
 1.01 Init - 110583 110352  232  0  1   97   65   474 0.970  42.42
 1.00 Prom - 111327 111288   40                              -7.76

 2.00 Prom + 112263 112302   40                              -5.96
 2.01 Init + 117815 117877   63  1  0   73   79    59 0.242   4.65
 2.02 Intr + 135556 135696  141  0  0   78  115    78 0.430  10.05
 2.03 Intr + 141518 141622  105  1  0   16   94    62 0.026   0.01
 2.04 Intr + 146853 146878   26  2  2  111   32    27 0.062  -3.78
 2.05 Intr + 147480 147558   79  0  1   67   99    75 0.127   6.05
 2.06 Intr + 151031 151060   30  1  0  117  117    11 0.590   5.23
 2.07 Intr + 152791 152943  153  0  0   63   68    43 0.293   0.07
 2.08 Intr + 157752 158159  408  2  0  139   83   640 0.869  63.06
 2.09 Intr + 165004 165160  157  0  1  105   96   333 0.999  35.38
 2.10 Intr + 170472 170499   28  1  1  120   94     9 0.998   1.87
 2.11 Intr + 170636 170738  103  2  1   99   79    91 0.998   9.48
 2.12 Intr + 172974 173066   93  2  0  108   69   173 0.999  17.56
 2.13 Intr + 174292 174378   87  0  0  103  -10   182 0.158  10.07
 2.14 Intr + 177892 178012  121  0  1   73   86   236 0.870  21.97
 2.15 Intr + 179319 179459  141  1  0  113   65   220 0.550  22.52
 2.16 Intr + 191631 191726   96  1  0  103   84   130 0.605  14.08
 2.17 Intr + 194393 194511  119  0  2   77   96   103 0.626  10.18
 2.18 Intr + 196376 196528  153  1  0   69   36   357 0.995  28.87
 2.19 Intr + 197015 197212  198  1  0  114  105   523 0.919  56.15
 2.20 Intr + 197904 198077  174  2  0   61   97   272 0.999  25.54
 2.21 Intr + 200028 200142  115  2  1   80   89   179 0.995  17.22
 2.22 Intr + 204688 204875  188  2  2   86   96   261 0.997  26.11
 2.23 Intr + 206533 206654  122  0  2   92   89   270 0.999  26.79
 2.24 Intr + 208035 208104   70  0  1  117  101   140 0.993  17.38
 2.25 Intr + 208864 209024  161  0  2  119   80   320 0.928  33.09

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  90330  90196  135  0  0   64   42   115 0.837   2.52


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815579r:50052612_50263194|GENSCAN_predicted_peptide_1|1455_aa
MPLALTLLLLSGLGAPGGWGCLQCDPLVLEALGHLRSALIPSRFQLEQLQARAGAVLMGM
EGPFFRDYALNVFVGKVETNQLDLVASFVKNQTQHLMGNSLKDEPLLEELVTLRANVIKE
FKKVLISYELKGLLKEEVLDCLHCQRITPKCIHKKYCFVDRQPRVALQYQMDSKYPRNQA
LLGILISVSLAVFVFVVIVVSYRDLQFRDRDCSGAFRDPAEEGKAWLSSGIRLDARNSRT
RPEQAHAQNPAMANGTLMAEGQESVTFKDVAVDFTLEEGRHGTQGPHWPWGLGDDRGEPL
VIGSLTLRKIKGPTGQPRHPEPLWLRPVARALGPSGHTGLLTVPVAAGMCPHRASVLAVP
TARTPSCTICTVQYGRLWPHMATEQLNMAGPNQDFQDVVWGRHGTQGPHWPWGLGDVRGE
PLVIGSLTLRKIKGPTGQPRHPEPLWLRPVARALGPSGHTGLLTVPVAAGMCPHRASVLA
VPTARTPSCTICTVQYGRLWPHMATEQLNMAGPNQDFQDVVRHTGLLTVPVAAGMCPHRA
SVLAVPTARTPSCTICTVQYGRLWPHMATEQLNMAGPNQDFQDVVRHTGLLTVPVAAGMC
PHRASVLAVPTARTPSCTICTVQYGRLWPHMATEQLNMAGPNQDFQDVVCHTGLLTVPVA
AGMCPHRASVLAVPTARTPSCTICTVQYGRLWPHMATEQLNMAGPNQDFQDVVCHTGLLT
VPVAAGMCPHRASVLAVPTARTPSCTICTVQYGRLWPHMATEQLNMAGPNQDFQDVVCHT
GLLTVPVAAGMCPHRASVLAVPTARTPSCTICTVQYGRLWPHMATEQLNMAGPNQDFQDV
VWQSCTPPWELEMTDVHYPDRFATRGSHTAGFWQERNKENYSEEEKRGTQKGRPRSTLPD
LDARPLRPQPCPPTPSLPSPRPQPCPGLVLPLHLSTAPLLVSLPTFLDLSFSVFMFPWAG
LPGSKSDVISRVDRGEELRQEREARRVTCPDSETSSVTIRETPRKKSISEDSASPVEGPL
RAMLGDAQHQRIHTGEKPYKGKDCGKAFTQSSSLIKHQRCHTGEKPYKCGQCGKFYSQVS
HLTRHQKIHTGEKPYQCGECGKAFCHTSSLTQHQTTHTGEKPYKCNKCGKTFSHSSSLTE
HQRVHTGEKPYECTDCGKAFSHSSSLTQHQRIHTGEKPYACHECGKAYTQISHLMRHQST
HVGEKPYVCNECGKAFSHTSSFTQHQTIHTGEKPYKCTECGKTFSQNSSLTHHQRIHTGE
KPYECKVCGKAYTQISHLIQHQRIHTGERPYEGRECGKAFSQSTHLIEHQKIHTGEKPYK
CKECGKTFSHNSSLTQHQKIHTGEKPYACKECGKAFNQSIHLIQHQRIHTGEKPYKCSDC
GRTYTQISHLLQHQKVHTGSKRYTCEECGEGFSWSSHLTEHQRLHTGQNAYICDDFEKAF
AWGTQLADHQRTHAD

>gi568815579r:50052612_50263194|GENSCAN_predicted_CDS_1|4368_bp
atgcctctggctttgacccttctgctgctctcgggcttgggcgcccccggaggctggggc
tgcctgcagtgcgaccccttggtgctggaggccctgggtcacctgcgctccgccctcatc
cccagtcgcttccagttggagcagctgcaggcgcgcgccggggccgtgctgatgggcatg
gaggggcctttcttccgggactacgcgctgaacgtgtttgtggggaaagtggagacaaat
caactggaccttgtggcgtcctttgtcaagaaccaaacgcagcacttaatgggtaactct
ctgaaagatgagcctctgctggaagagctggtgaccctcagggcgaatgtgatcaaggaa
ttcaagaaagttttaatttcatatgaattaaaaggcttgctaaaagaagaggtgttggac
tgtttacattgccagaggatcactcccaagtgtatccacaaaaagtactgctttgtcgac
cggcaaccccgcgtggccctgcagtaccagatggacagcaaatacccgaggaaccaggcg
ctgttgggcatcctcatttctgtgtctctggctgtctttgtcttcgtggtcatcgtggtc
tcgtaccgggacttacagttccgagacagggactgctcaggcgcgttccgggacccggcg
gaggaagggaaggcctggctgtccagcggaatccgcctggacgcacggaactcgcggacc
cgaccggagcaggcacatgcccagaacccagcaatggccaatgggaccttgatggccgag
ggccaggaatcagtgaccttcaaggatgtggcggtggacttcaccctggaggaggggcgc
catggaacgcagggccctcactggccctggggactgggtgacgacaggggggagcctctg
gtgattggctccctcaccctgcgtaagatcaaagggcctacaggacagccccgacacccg
gagccattgtggctccggccggttgcgcgggccctcggaccctcaggccacacggggctc
ctcactgttcccgtagcagcaggcatgtgcccccacagggcctctgtactggctgttccc
actgcccgaacaccctcatgcaccatctgcactgtccaatacggccgcctctggccacac
atggctactgagcagttgaacatggctggtccaaaccaagatttccaagacgtcgtatgg
gggcgccatggaacgcagggccctcactggccctggggactgggtgacgtcaggggtgag
cctctggtgattggctccctcaccctgcgtaagatcaaagggcctacaggacagccccga
cacccggagccattgtggctccggccggttgcgcgggccctcggaccctcaggccacacg
gggctcctcactgttcccgtagcagcaggcatgtgcccccacagggcctctgtactggct
gttcccactgcccgaacaccctcatgcaccatctgcactgtccaatacggccgcctctgg
ccacacatggctactgagcagttgaacatggctggtccaaaccaagatttccaagacgtc
gtacgccacacggggctcctcactgttcccgtagcagcaggcatgtgcccccacagggcc
tctgtactggctgttcccactgcccgaacaccctcatgcaccatctgcactgtccaatac
ggccgcctctggccacacatggctactgagcagttgaacatggctggtccaaaccaagat
ttccaagacgtcgtacgccacacggggctcctcactgttcccgtagcagcaggcatgtgc
ccccacagggcctctgtactggctgttcccactgcccgaacaccctcatgcaccatctgc
actgtccaatacggccgcctctggccacacatggctactgagcagttgaacatggctggt
ccaaaccaagatttccaagacgtcgtatgccacacggggctcctcactgttcccgtagca
gcaggcatgtgcccccacagggcctctgtactggctgttcccactgcccgaacaccctca
tgcaccatctgcactgtccaatacggccgcctctggccacacatggctactgagcagttg
aacatggctggtccaaaccaagatttccaagacgtcgtatgccacacggggctcctcact
gttcccgtagcagcaggcatgtgcccccacagggcctctgtactggctgttcccactgcc
cgaacaccctcatgcaccatctgcactgtccaatacggccgcctctggccacacatggct
actgagcagttgaacatggctggtccaaaccaagatttccaagacgtcgtatgccacacg
gggctcctcactgttcccgtagcagcaggcatgtgcccccacagggcctctgtactggct
gttcccactgcccgaacaccctcatgcaccatctgcactgtccaatacggccgcctctgg
ccacacatggctactgagcagttgaacatggctggtccaaaccaagatttccaagacgtc
gtatggcaaagctgcaccccaccatgggaactggaaatgacagatgttcactacccagac
cgctttgcaactcggggtagccacacagccgggttctggcaagagagaaataaggagaat
tattctgaggaggaaaaaaggggaacacagaaggggaggccccggtctacactgcctgat
ttagatgccagacccctcaggccacagccctgccctcctacaccctccttaccatcccca
cggccccagccctgcccaggcctcgtcttgcccctgcacctcagcacagcccccttgctg
gtttcacttcccaccttcctggacctgtcgttctccgtctttatgttcccctgggcaggg
ctgcctgggtccaaatccgacgtgatctcccgtgtggatcgaggggaagagctgaggcag
gagagagaggcccggcgagttacctgcccagactcggagacaagctctgtgactattcga
gagacacctcgaaaaaagagcatttctgaagattcagcttccccagtagagggaccttta
agggccatgcttggagatgcccagcatcagaggattcacactggagagaagccctacaaa
ggcaaggactgcgggaaggccttcacacagagctcatccctcatcaaacaccagcggtgc
cacaccggggagaagccctataaatgcggccagtgtgggaagttctactcgcaggtctcc
cacctcacccgccaccagaaaatccacacgggggagaagccctaccaatgtggagagtgc
ggcaaggccttctgtcacacctcctccctgacccaacaccagaccacccacacgggggag
aaaccctacaaatgtaacaagtgtgggaaaacgttcagccacagctcatccctgactgag
caccagcgagtccacactggagaaaaaccctatgagtgcactgattgtggcaaagccttc
agccacagctcgtccctgacccagcatcagcgaattcacactggcgagaagccctacgcg
tgtcacgagtgcgggaaggcttacacgcagatttcccacctcatgaggcaccagagcact
cacgtgggggaaaagccctatgtatgcaacgaatgtgggaaggctttcagccacacctca
tcctttactcagcaccagaccatccacaccggtgagaagccctacaaatgtacagagtgt
gggaaaaccttcagccagaactcctccctcacacaccaccagaggattcacacaggggag
aaaccctatgaatgtaaagtgtgtgggaaagcctatacccagatctcccacctcattcaa
caccagaggattcacactggagagaggccctacgagggcagagagtgtgggaaagccttc
agccagagcacgcacctcattgagcaccagaagatccacactggcgagaagccctataag
tgtaaggaatgtgggaaaaccttcagtcacaactcatccctcactcaacatcagaagatt
cacaccggcgagaagccctacgcctgcaaggaatgtgggaaggccttcaaccagagcatc
cacttaatccaacaccaaaggattcacactggagagaagccttacaagtgtagtgactgt
gggagaacctatacccagatctcacaccttctccaacatcagaaggtccacactggcagc
aaacgctacacatgtgaggagtgtggagagggtttcagctggagttcacacctgactgaa
caccagaggcttcatactggccagaatgcctacatctgtgatgattttgagaaagccttt
gcttggggcacacagcttgctgatcatcagagaacccatgctgattag

>gi568815579r:50052612_50263194|GENSCAN_predicted_peptide_2|1044_aa
MALSPSTDEDDEVVQLAPNRTPAFHSGGQMSLKARGTPAAMPGSKEPEANQRWSRSLRTP
RPSEGDRQPPKMLGLHGMSRHIRSDSGYILKVTLTFADKLDVELIPTGPTEGLSRIDDIS
NYEVNLEPGGHDDITSCQAEASGRPWKPPGRCWVTSEPGSRPVTRRGPALRWTAEVAAPE
ENGDSRALTPSPRSGRRPQTMAAVTMSVPGRKAPPRPGPVPEAAQPFLFTPRGPSAGGGP
GSGTSPQVEWTARRLVWVPSELHGFEAAALRDEGEEEAEVELAESGRRLRLPRDQIQRMN
PPKFSKAEDMAELTCLNEASVLHNLRERYYSGLIYTYSGLFCVVINPYKQLPIYTEAIVE
MYRGKKRHEVPPHVYAVTEGAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAHVAS
SPKGRKEPGVPGELERQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVAGYIVGAN
IETCILSQPMGHLDSLCPDLLEKSRAIRQAKDECSFHIFYQLLGGAGEQLKADLLLEPCS
HYRFLTNGPSSSPGQERELFQETLESLRVLGFSHEEIISMLRMVSAVLQFGNIALKRERN
TDQATMPDNTAAQKLCRLLGLGVTDFSRALLTPRIKVGRDYVQKAQTKEQADFALEALAK
ATYERLFRWLVLRLNRALDRSPRQGASFLGILDIAGFEIFQLTCPASLQLNSFEQLCINY
TNEKLQQLFNHTMFVLEQEEYQREGIPWTFLDFGLDLQPCIDLIERPANPPGLLALLDEE
CWFPKATDKSFVEKVAQEQGGHPKFQRPRHLRDQADFSVLHYAGKVDYKANEWLMKNMDP
LNDNVAALLHQSTDRLTAEIWKDVEGIVGLEQVSSLGDGPPGGRPRRGMFRTVGQLYKES
LSRLMATLSNTNPSFVRCIVPNHEKRAGKLEPRLVLDQLRCNGVLEGIRICRQGFPNRIL
FQEFRQRYEILTPNAIPKGFMDGKQACEKMIQALELDPNLYRVGQSKIFFRAGVLAQLEE
ERDLKVTDIIVSFQAAARGYLARS

>gi568815579r:50052612_50263194|GENSCAN_predicted_CDS_2|3132_bp
atggcattgtccccatctacagatgaggatgatgaggttgtacaacttgccccaaatcgg
acacctgcattccattcgggcggacagatgtccctgaaggcccgagggacaccagccgct
atgccaggctccaaagaacccgaggcaaaccaacgctggtcccggtctttgaggactccc
cggcccagtgagggagaccgacagcctcccaaaatgctgggattacatggcatgagccgc
cacatccgatcagattctggatatattttgaaggtcacattgacatttgctgataaactg
gatgtagagctgatacccacaggacccacagagggactgagcagaattgatgacatctcc
aattatgaggtcaatttagaacctggtgggcatgatgatatcacaagttgccaggccgaa
gcctcgggacggccctggaagccgccgggcaggtgctgggtgacatcagagccgggctcc
cgccctgtgacgcgacggggccccgccctgcgctggaccgcggaggtcgctgcacctgaa
gagaacggggattcccgcgccctcaccccatctccccgctccggtcggcgcccccagacc
atggcagccgtgaccatgtcggtgcccgggcggaaggcgccccccaggccgggcccagtg
cccgaggcggcccagccgttcctgttcacgccccgcgggcccagcgcgggtggcgggcct
ggctcgggcacctccccgcaggtggagtggacggcccggcgtctcgtgtgggtgccttcg
gagcttcacgggttcgaggcggcggcgctgcgggacgaaggcgaggaggaggcggaggtg
gagctggcggagagcgggaggcggctgcgactgccgcgggaccagatccagcgcatgaac
ccgcccaagttcagcaaggccgaggacatggccgagctgacctgcctcaacgaggcctcg
gtcctgcacaacctccgggagcggtactactccggcctcatctacacgtactccggcctt
ttctgtgtggtcatcaacccgtacaagcagcttcccatctacacagaagccattgtggag
atgtaccggggcaagaagcgccacgaggtgccaccccacgtgtacgcagtgaccgagggg
gcctatcggagcatgctgcaggatcgtgaggaccagtccattctctgcactggagagtct
ggagctgggaagacggaaaacaccaagaaggtcatccagtacctcgcccacgtggcgtcg
tctccaaagggcaggaaggagccgggtgtccccggtgagctggagcggcagctgcttcag
gccaaccccatcctagaggcctttggcaatgccaagacagtgaagaatgacaactcctcc
cgattcggcaaattcatccgcatcaactttgatgttgccgggtacatcgtgggcgccaac
attgagacctgtatcctctcacagcccatggggcaccttgactcgctgtgtccagacctg
ctggagaagtcgcgggccatccgccaggccaaggacgagtgcagcttccacatcttctac
cagctgctggggggcgctggagagcagctcaaagccgacctcctcctcgagccctgctcc
cactaccggttcctgaccaacgggccgtcatcctctcccggccaggagcgggaactcttc
caggagacgctggagtcgctgcgggtcctgggattcagccacgaggaaatcatctccatg
ctgcggatggtctcagcagttctccagtttggcaacattgccttgaagagagaacggaac
accgatcaagccaccatgcctgacaacacagctgcacagaagctctgccgcctcttggga
ctgggggtgacggatttctcccgagccttgctcacccctcgcatcaaagttggccgagac
tatgtgcagaaagcccagactaaggaacaggctgacttcgcgctggaggccctggccaag
gccacctacgagcgcctcttccgctggctggttctgcgcctcaaccgggccttggaccgc
agcccccgccaaggcgcctccttcctgggcatcctggacatcgcgggctttgagatcttc
cagctcacgtgtcctgcgtccctgcagctgaactccttcgagcagctctgcatcaactac
accaacgagaagctgcagcagctcttcaaccacaccatgttcgtgctggagcaggaggag
taccagcgtgagggcatcccctggaccttcctcgactttggcctcgacctgcagccctgc
atcgacctcatcgagcggccggccaacccccctggactcctggccctgctggatgaggag
tgctggttcccgaaggccacagacaagtcgtttgtggagaaggtagcccaggagcagggc
ggccaccccaagttccagcggccgaggcacctgcgggatcaggccgacttcagtgttctc
cactacgcgggcaaggtcgactacaaggccaacgagtggctgatgaaaaacatggaccct
ctgaatgacaacgtcgcagccttgctccaccagagcacagaccggctgacggcagagatc
tggaaagacgtggagggcatcgtggggctggaacaggtgagcagcctgggcgacggccca
ccaggtggccgcccccgtcggggtatgttccggacagtgggacagctctacaaggagtcc
ctgagccgcctcatggccacactcagcaacaccaaccccagttttgtccgctgcattgtc
cccaaccacgagaagagggccgggaagctggagccacggctggtgctggaccagcttcgc
tgcaacggggtcctggagggcatccgcatctgtcgccagggcttccccaaccgcatcctc
ttccaggagttccggcagcgatacgagatcctgacacccaatgccatccccaagggcttc
atggatgggaagcaggcctgtgaaaagatgatccaggcgctggaactggaccccaacctc
taccgcgtgggacagagcaagatcttcttccgggctggggtcctggcccagctggaagag
gagcgagacctgaaggtcaccgacatcatcgtctccttccaggcagctgcccggggatac
ctggctcgcagn