GENSCAN 1.0	Date run:  4-Nov-116	Time: 02:32:42

Sequence gi568815582f:11576060_11776323 : 200264 bp : 47.22% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  10678  10755   78  0  0   69   53    86 0.174   2.47
 1.02 Intr +  20307  20418  112  2  1   98   72    66 0.348   5.95
 1.03 Intr +  25814  26024  211  0  1   63   28    96 0.032  -0.93
 1.04 Intr +  28722  29002  281  0  2  119    8   112 0.403   3.42
 1.05 Intr +  32473  32603  131  2  2   32   64    94 0.314   1.81
 1.06 Term +  52267  52344   78  0  0  117   37    53 0.028   0.86
 1.07 PlyA +  52410  52415    6                              -0.45

 2.04 PlyA -  52449  52444    6                               1.05
 2.03 Term -  56834  56736   99  2  0   77   46   128 0.687   5.63
 2.02 Intr -  59813  59766   48  2  0   58   79    61 0.066   1.08
 2.01 Init -  75647  75609   39  2  0   87   93    81 0.610   6.69
 2.00 Prom -  84584  84545   40                              -4.26

 3.00 Prom +  87467  87506   40                              -3.06
 3.01 Init +  99578  99780  203  1  2   76   80   102 0.674   6.55
 3.02 Term +  99916 100267  352  1  1  105   52   546 0.754  46.66
 3.03 PlyA + 102996 103001    6                               1.05

 4.18 PlyA - 103052 103047    6                               1.05
 4.17 Term - 103778 103136  643  1  1  124   32   679 0.998  59.54
 4.16 Intr - 108186 108106   81  2  0  111   95    -9 0.543   0.85
 4.15 Intr - 111907 111798  110  1  2  118  121    94 0.874  14.78
 4.14 Intr - 112386 112244  143  1  2   66   80   -11 0.780  -4.03
 4.13 Intr - 116023 115231  793  1  1   86   52   692 0.900  56.44
 4.12 Intr - 122266 122066  201  1  0  130   94   153 0.987  19.58
 4.11 Intr - 160092 159958  135  0  0   74   95   148 0.971  14.86
 4.10 Intr - 162394 162292  103  0  1  118   75    54 0.993   7.28
 4.09 Intr - 166771 166418  354  0  0  -26   94   479 0.388  31.50
 4.08 Intr - 176773 176610  164  1  2   74   77   236 0.961  19.87
 4.07 Intr - 180311 180178  134  0  2   46   79    74 0.853   2.66
 4.06 Intr - 187600 187419  182  0  2   79   96    97 0.845   9.11
 4.05 Intr - 189094 188994  101  1  2  110   44     7 0.863  -2.59
 4.04 Intr - 189626 189430  197  0  2  110   85   102 0.994  11.23
 4.03 Intr - 194928 194724  205  0  1  131   94   -32 0.756   0.47
 4.02 Intr - 198460 198177  284  2  2   89  115   164 0.898  16.34
 4.01 Intr - 198954 198921   34  0  1  102   91    32 0.819   2.70

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  22566  22645   80  1  2   78   52    83 0.846   1.63


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815582f:11576060_11776323|GENSCAN_predicted_peptide_1|296_aa
MPATRPAPPGIPGGPSQGLSARGPQQGLCCMTVFLFNKTYPGHSNWHLMQNEIPIEEEEE
EERIQNSTLGIYHMDVLVPVPRWDVLAPVPGWDVPHDLNSDSPSVETMQMTPEGVEQIPP
EKPLNKITLPNGAGVISFGQIPRSVITDEKSIDISRPLKRCVKLLPEEAGTHPRLFKELP
AQCNEATAISVIFGCETSVLLCREVGAMRERTELPCLLQESARTTAGHKWMNKIRSIHTT
EHYSAMEKNKALIRAASWMNLGNSTLSERSQLRVLGTLSRVPSKRFAERPTQINTQ

>gi568815582f:11576060_11776323|GENSCAN_predicted_CDS_1|891_bp
atgcccgcgacccgacccgcgccccctggcatcccaggaggccccagccaagggctcagt
gcccggggcccccagcagggattgtgctgcatgactgtgtttctatttaacaaaacatac
ccaggtcacagcaactggcatctgatgcagaatgaaatcccaatagaggaggaggaggag
gaagagagaatccagaattccaccctgggaatctaccacatggatgtgcttgttcctgtg
cctagatgggatgttcttgctcctgtgcctggatgggatgtcccacatgacctcaatagt
gatagccccagcgtggaaacaatgcaaatgactccagaaggagttgaacaaatacctcca
gaaaaaccactcaataagataactctgcccaatggggccggggttatttcctttgggcaa
attcccagaagtgtgattactgacgagaaaagtatagacatttccaggcccctgaaacgc
tgcgtcaaactgcttcctgaagaggctgggacccacccacgcctgttcaaggaactgcct
gctcagtgtaatgaagccactgccatctcggtcatctttggatgtgaaacatctgttctc
ctgtgtcgggaagttggagcaatgcgggaaagaacggaacttccttgcctactccaggaa
tcggccaggaccactgctggacacaagtggatgaacaaaatccggtctatccatacaacg
gagcattattcagccatggaaaagaataaagcactgatacgggctgcatcgtggatgaac
cttggaaacagtacactgagtgagagaagtcagctaagagtcctgggaactctttctaga
gttccaagtaaacgctttgcagaacgcccaacccagatcaacacccagtag

>gi568815582f:11576060_11776323|GENSCAN_predicted_peptide_2|61_aa
MASSRKASSLGLLVWNPATCDTGLRGVKKEAQSGVGLCGNSCGIPGIRQKKKDEEAAHGK
L

>gi568815582f:11576060_11776323|GENSCAN_predicted_CDS_2|186_bp
atggcctccagcagaaaggcctccagcctgggccttctggtgtggaaccctgccacctgc
gacacaggtcttcgaggagtcaaaaaggaggctcagagtggggtgggcctctgtggaaat
tcctgtggaattccaggcattcggcagaagaagaaggacgaggaggcggcacacggaaaa
ctctga

>gi568815582f:11576060_11776323|GENSCAN_predicted_peptide_3|184_aa
MNTELGLGFPKAHLQLKNQNHVWPSGILCCSCRCRSVPGSAASEGDSPAWYSSTRGFKGH
EQELGERGTPVSSLSSSLTEWPPPKCCQPRKPPALTMSIMDHSPTTGVVTVIVILIAIAA
LGALILGCWCYLRLQRISQSEDEESIVGDGETKEPFLLVQYSAKGPCVERKAKLMTPNGP
EVHG

>gi568815582f:11576060_11776323|GENSCAN_predicted_CDS_3|555_bp
atgaacactgagttggggctgggcttcccgaaggcacaccttcagctgaagaaccagaac
catgtctggccctctggcatcctttgctgcagctgtcgctgtcgcagtgttcccggctct
gccgccagcgagggtgactcacctgcctggtacagcagcactcggggtttcaaaggtcat
gaacaggagctgggtgagcgtgggactcccgtgtccagcctgagttccagcctcactgag
tggccacccccaaagtgctgccagccgaggaagcccccagcactgaccatgtctattatg
gaccacagccccaccacgggcgtggtcacagtcatcgtcatcctcattgccatcgcggcc
ctgggggccttgatcctgggctgctggtgctacctgcggctgcagcgcatcagccagtca
gaggacgaggagagcatcgtgggggatggggagaccaaggaacccttcctgctggtgcag
tattcggccaagggaccgtgcgtggagagaaaggccaagctgatgactcccaacggcccg
gaagtccacggctga

>gi568815582f:11576060_11776323|GENSCAN_predicted_peptide_4|1287_aa
ALNHSVEDIEPDLLTPRQEAVPVVSLPAPSFSHEVGSELASVPVMPLTSILPLQVEESAL
PSAVLANGGKMPFTMPEAFLDDGDMVLGDELDDLLDSAPETNETVMPSALVRGPLQTASV
SPSMPFSASLLGTLPIGARYAPPPSFSEFYPPLTSSLEDFCSSLNSFSMSESKRDVAAEE
ECRYSGHCTFAYCQEEIDVWTLERKGAFSREAFFGGNGKINLTVFKLLQEHLGEFIFLCE
KCFDHKPRMISKRNKDNSTACSHPVTKHEFEDNKCLVHILRETTVKYSKIRSFHGQCQLD
LCRHEVRYGCLREDECFYAHSLVELKVWIMQNETVQDMEQFYELWLKSQKNEKSEDIASQ
SNKENGKQIHMPTDYAEVTVDFHCWMCGKNCNSEKQWQGHISSEKHKEKVFHTEDDQYCW
QHRFPTGYFSICDSGCGELRDWGATGRAGPSGPRRRRRYKAGDWEHVMSECGGRGGGSSS
SEDAEDEGGGGGGPAGSDCLSSSPTLATASSAGRLRRGLRGAFLMARQRPELLCGAVALG
CALLLALKFTCRKWSPRQHAVLAAAALVLVPKAQSQLLSKEFLNNCGQLDYAEYVRRDSE
VVLLFFYAPWCGQSIAARAEIEQAASRLSDQVFPREVLNYTAENICKWALENQETLFRWL
RPHGGKSLLLNNELKKGPALFLFIPFNPLAESHPLIDEITEVALEYNNCHGDQVVERLLQ
HLRRVDAPVLESLALEVPAQLPDPPTITASPCCNTVVLPQWHSFSRTHNVCELCVNQTSG
GMKPSSVSVPQCSFFEMAAALDSFYLKEQTFYHVASDSIECSNFLTSYSPFSYYTACCRT
ISRGVSGFIDSEQGVFEAPTVAFSSLEKKCEVDAPSSVPHIEENRYLFPEVDMTSTNFTG
LSCRTNKTLNIYLLDSNLFWLYAERLGAPSSTQVKEFAAIVDVKEESHYILDPKQALMKL
TLESFIQNFSVLYSPLKRHLIGSGSAQFPSQHLITEVTTDTFWEVVLQKQDVLLLYYAPW
CGFCPSLNHIFIQLARNLPMDTFTVARIDVSQNDLPWEFMVDRLPTVLFFPCNRKDLSVK
YPEDVPITLPNLLRFILHHSDPASSPQNVANSPTKECLQSEAVLQRGHISHLEREIQKLR
AEISSLQRAQVQVESQLSSARRDEHRLRQQQRALEEQHSLLHAHSEQLQALYEQKTRELQ
ELARKLQELADASENLLTENTWLKILVATMERKLEGRDGAESLAAQREVHPKQPEPSATP
QLPGSSPPPANVSATLVSERNKENRTD

>gi568815582f:11576060_11776323|GENSCAN_predicted_CDS_4|3864_bp
gctttgaaccattctgtggaagatattgagccagatttattaactccaaggcaagaagca
gttcctgttgtctctttaccggcacccagtttttctcatgaagttggaagtgagctggcc
tcagttcctgttatgcccttaacttctattttgccactacaagtggaagagagcgctctg
ccatctgcagtgctggcaaatggaggaaagatgcccttcactatgccagaagcttttcta
gatgatggagatatggtccttggagatgaactagatgacctgcttgattctgcacctgaa
actaatgaaactgttatgccgtcagctttagtcagaggaccccttcagacagccagtgtc
tctcctagcatgcccttttcggcatcgctgttaggaaccttacccattggtgcgaggtat
gctcctccaccctccttctcagaattttatccacctttgacttcatccttagaagatttt
tgttcttctttaaattcattttcaatgagtgaatccaaacgagatgttgctgctgaggag
gaatgtagatattcaggccactgcacgtttgcttattgccaagaggagatagatgtgtgg
acactggagcggaaaggagcattcagccgggaggctttctttggcggcaatggaaagatt
aaccttactgtgttcaaacttctccaggagcatcttggggaatttatattcctttgtgag
aaatgttttgatcataagcctagaatgataagtaaaagaaataaagataattctactgct
tgttctcacccggttacaaagcatgagtttgaagacaataagtgccttgtccacattttg
cgagagacaacagtaaaatactccaaaatacgttcttttcatggtcagtgtcagcttgat
ttatgtcgacatgaagttcggtatggctgtttaagggaagatgagtgcttttatgcccat
agtcttgtggaactgaaagtctggataatgcaaaatgaaacagtacaagatatggagcaa
ttttacgaactatggctcaagagtcaaaaaaatgaaaaaagtgaagacatagccagtcag
tcaaacaaggaaaatggaaaacaaattcacatgccaacagattatgctgaagttacagtg
gactttcactgctggatgtgtgggaaaaactgcaacagtgagaagcagtggcagggccac
atctcctccgagaagcacaaagagaaggttttccacaccgaggacgaccagtactgctgg
cagcaccgcttcccaacaggctatttcagtatttgtgatagcgggtgcggcgagctgcgg
gattggggagcaacgggccgggccgggccttcgggcccgaggcggcggcggcggtataaa
gccggcgactgggagcatgtaatgtcggaatgcggaggccgcggcggcggcagcagcagc
agcgaggacgccgaggacgagggagggggcggcggcggccccgcgggctcagactgcctc
agctcgagcccgaccctggccacagcgtcctcggcgggccggctccgtcgcgggctgcgt
ggcgccttcctcatggcgcgccagcggccggagctgctctgcggggccgtggcgctcggc
tgcgcgctgctcctcgccctcaagttcacctgcagaaagtggtctcctcgacaacacgca
gtgctagctgccgcagccttagtgcttgtgcccaaagcacagtcacagctgctcagtaaa
gaatttttgaataattgtgggcagctggattatgcagagtacgttcgacgggattcagag
gtggtactgctcttcttctatgccccttggtgtggacagtccatcgctgccagggcagaa
attgagcaagcagcaagtcggctttcagatcaggtcttccccagggaggtcctgaactac
acagctgagaacatctgtaagtgggccttagaaaaccaggagacgctctttcggtggctg
cggccacacggaggcaagagtctcctgctgaataacgagctgaagaaaggaccagcgctg
tttctgttcataccttttaatcccctggccgaaagtcatcctttaatagacgagatcacc
gaagtggccttggagtacaacaactgtcatggggaccaggtggtggagcgtctccttcag
cacctgcggcgggtggatgctccagtgctggagtccctggccctggaagtgccggcacag
ctgccagacccgccaacgatcacagcgtccccctgctgcaacactgtggtgctgccccag
tggcactccttctccaggacccacaacgtctgtgaactctgtgtcaaccagacctccggg
ggcatgaagccgagctcggtcagcgtgccacagtgcagcttttttgaaatggcagcagct
ctggattctttctacctcaaggagcagaccttttatcatgtggcatcagacagcatagaa
tgcagcaattttttaacttcctatagccccttcagctactacactgcatgttgcaggacc
ataagcaggggtgtgtcaggcttcatcgactctgaacaaggtgtctttgaagcccctact
gttgcattttcttcccttgagaagaaatgtgaggttgatgccccaagctccgttcctcac
attgaggagaacaggtatctctttccagaagtggacatgactagcacaaacttcacaggc
ctgagctgcagaaccaacaagactctcaacatctaccttttggattcaaatttgttttgg
ttatatgcagagagactgggtgctccgagctccactcaggtgaaagaatttgcggcaatt
gttgacgtgaaagaagaatctcattacatcttggatccaaagcaagcactgatgaagctc
accctagagtcttttattcaaaacttcagcgttctctatagtcccttgaaaaggcatctc
attggaagtggctctgcccagttcccgtctcagcatttaatcactgaagtgacaactgat
accttttgggaagtagtccttcaaaaacaggacgttctcctgctctattacgctccgtgg
tgcggcttctgtccatccctcaatcacatcttcatccagctagctcggaacctgcccatg
gacacattcactgtggcaaggattgacgtgtctcagaatgaccttccttgggaatttatg
gtcgatcgtcttcctactgtcttgttttttccctgcaacagaaaggacctaagtgtgaaa
taccccgaagacgtccccatcacccttccaaacctgttgaggttcattttgcatcactca
gaccctgcttccagcccccagaatgtggctaactctcctaccaaggagtgtcttcagagc
gaggcagtcttacagcgggggcacatctcccacttggagagagagatccagaaactgaga
gcagaaataagcagcctccagcgagcacaagtgcaggtggagtcccagctctccagtgcc
cgcagagatgagcaccggctgcggcagcagcagcgggccctggaagagcagcacagcctg
ctccacgcacacagtgagcagctgcaggccctctatgagcagaagacacgtgagctgcag
gagctggcccgcaagctgcaggagctggccgatgcctcagaaaacctccttaccgagaac
acgtggctcaagatcctggtggcgaccatggagaggaaactggagggcagggatggagct
gaaagcctggcggcccagagagaggtccaccccaagcagcctgagccctcagccaccccc
cagctccctggcagctcccctccacctgccaatgtcagcgccacactggtgtctgaaagg
aataaggagaacaggacagactaa