Result of FASTA (ccds) for pF1KE0031
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0031, 494 aa
  1>>>pF1KE0031 494 - 494 aa - 494 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.8515+/-0.00114; mu= 11.1140+/- 0.068
 mean_var=110.7554+/-22.090, 0's: 0 Z-trim(105.3): 109  B-trim: 438 in 1/49
 Lambda= 0.121869
 statistics sampled from 8253 (8368) to 8253 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.613), E-opt: 0.2 (0.257), width:  16
 Scan time:  2.840

The best scores are:                                      opt bits E(32554)
CCDS45677.1 DNAJC7 gene_id:7266|Hs108|chr17        ( 494) 3291 589.9 2.1e-168
CCDS45678.1 DNAJC7 gene_id:7266|Hs108|chr17        ( 438) 2930 526.4 2.5e-149
CCDS9479.1 DNAJC3 gene_id:5611|Hs108|chr13         ( 504)  635 122.9 8.1e-28


>>CCDS45677.1 DNAJC7 gene_id:7266|Hs108|chr17             (494 aa)
 initn: 3291 init1: 3291 opt: 3291  Z-score: 3136.8  bits: 589.9 E(32554): 2.1e-168
Smith-Waterman score: 3291; 99.8% identity (100.0% similar) in 494 aa overlap (1-494:1-494)

               10        20        30        40        50        60
pF1KE0 MAAAAECDVVMAATEPELLDDQEAKREAETFKEQGNAYYAKKDYNEAYNYYTKAIDMCPK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MAAAAECDVVMAATEPELLDDQEAKREAETFKEQGNAYYAKKDYNEAYNYYTKAIDMCPK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 NASYYGNRAATLMMLGRFREALGDAQQSVRLDDSFVRGHLREGKCHLSLGNAMAACRSFQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 NASYYGNRAATLMMLGRFREALGDAQQSVRLDDSFVRGHLREGKCHLSLGNAMAACRSFQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 RALELDHKNAQAQQEFKNANAVMEYEKIAETDFEKRDFRKVVFCMDRALEFAPACHRFKI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 RALELDHKNAQAQQEFKNANAVMEYEKIAETDFEKRDFRKVVFCMDRALEFAPACHRFKI
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE0 LKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCLYYEDCIEKAVQFFVQALRMA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 LKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCLYYEDCIEKAVQFFVQALRMA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE0 PDHEKACIACRNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNAKLYCNR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 PDHEKACIACRNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNAKLYCNR
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE0 GTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKVYQTEKT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKVYQTEKT
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE0 KEHKQLLKNAQLELRKSKRKDYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSGASAEV
       ::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::
CCDS45 KEHKQLLKNAQLELKKSKRKDYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSGASAEV
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE0 QKEEEKKFKEVGEAFTILSDPKKKTRYDSGQDLDEEGMNMGDFDPNNIFKAFFGGPGGFS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 QKEEEKKFKEVGEAFTILSDPKKKTRYDSGQDLDEEGMNMGDFDPNNIFKAFFGGPGGFS
              430       440       450       460       470       480

              490    
pF1KE0 FEASGPGNFFFQFG
       ::::::::::::::
CCDS45 FEASGPGNFFFQFG
              490    

>>CCDS45678.1 DNAJC7 gene_id:7266|Hs108|chr17             (438 aa)
 initn: 2930 init1: 2930 opt: 2930  Z-score: 2794.5  bits: 526.4 E(32554): 2.5e-149
Smith-Waterman score: 2930; 99.8% identity (100.0% similar) in 438 aa overlap (57-494:1-438)

         30        40        50        60        70        80      
pF1KE0 EAETFKEQGNAYYAKKDYNEAYNYYTKAIDMCPKNASYYGNRAATLMMLGRFREALGDAQ
                                     ::::::::::::::::::::::::::::::
CCDS45                               MCPKNASYYGNRAATLMMLGRFREALGDAQ
                                             10        20        30

         90       100       110       120       130       140      
pF1KE0 QSVRLDDSFVRGHLREGKCHLSLGNAMAACRSFQRALELDHKNAQAQQEFKNANAVMEYE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 QSVRLDDSFVRGHLREGKCHLSLGNAMAACRSFQRALELDHKNAQAQQEFKNANAVMEYE
               40        50        60        70        80        90

        150       160       170       180       190       200      
pF1KE0 KIAETDFEKRDFRKVVFCMDRALEFAPACHRFKILKAECLAMLGRYPEAQSVASDILRMD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 KIAETDFEKRDFRKVVFCMDRALEFAPACHRFKILKAECLAMLGRYPEAQSVASDILRMD
              100       110       120       130       140       150

        210       220       230       240       250       260      
pF1KE0 STNADALYVRGLCLYYEDCIEKAVQFFVQALRMAPDHEKACIACRNAKALKAKKEDGNKA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 STNADALYVRGLCLYYEDCIEKAVQFFVQALRMAPDHEKACIACRNAKALKAKKEDGNKA
              160       170       180       190       200       210

        270       280       290       300       310       320      
pF1KE0 FKEGNYKLAYELYTEALGIDPNNIKTNAKLYCNRGTVNSKLRKLDDAIEDCTNAVKLDDT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 FKEGNYKLAYELYTEALGIDPNNIKTNAKLYCNRGTVNSKLRKLDDAIEDCTNAVKLDDT
              220       230       240       250       260       270

        330       340       350       360       370       380      
pF1KE0 YIKAYLRRAQCYMDTEQYEEAVRDYEKVYQTEKTKEHKQLLKNAQLELRKSKRKDYYKIL
       ::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::
CCDS45 YIKAYLRRAQCYMDTEQYEEAVRDYEKVYQTEKTKEHKQLLKNAQLELKKSKRKDYYKIL
              280       290       300       310       320       330

        390       400       410       420       430       440      
pF1KE0 GVDKNASEDEIKKAYRKRALMHHPDRHSGASAEVQKEEEKKFKEVGEAFTILSDPKKKTR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GVDKNASEDEIKKAYRKRALMHHPDRHSGASAEVQKEEEKKFKEVGEAFTILSDPKKKTR
              340       350       360       370       380       390

        450       460       470       480       490    
pF1KE0 YDSGQDLDEEGMNMGDFDPNNIFKAFFGGPGGFSFEASGPGNFFFQFG
       ::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 YDSGQDLDEEGMNMGDFDPNNIFKAFFGGPGGFSFEASGPGNFFFQFG
              400       410       420       430        

>>CCDS9479.1 DNAJC3 gene_id:5611|Hs108|chr13              (504 aa)
 initn: 320 init1: 184 opt: 635  Z-score: 612.9  bits: 122.9 E(32554): 8.1e-28
Smith-Waterman score: 635; 28.3% identity (62.7% similar) in 480 aa overlap (27-493:36-503)

                   10        20        30        40        50      
pF1KE0     MAAAAECDVVMAATEPELLDDQEAKREAETFKEQGNAYYAKKDYNEAYNYYTKAID
                                     ..:   : :.   :  .  .: . .  :.:
CCDS94 SVTSRLGSVFPFLLVLVDLQYEGAECGVNADVEKHLELGKKLLAAGQLADALSQFHAAVD
          10        20        30        40        50        60     

         60        70        80        90       100       110      
pF1KE0 MCPKNASYYGNRAATLMMLGRFREALGDAQQSVRLDDSFVRGHLREGKCHLSLGNAMAAC
         : :   :  ::.... .:. . :: :  . ..:  .:. ..:..:.  :. :.   : 
CCDS94 GDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLLKQGKLDEAE
          70        80        90       100       110       120     

        120          130       140       150       160       170   
pF1KE0 RSFQRALELD---HKNAQAQQEFKNANAVMEYEKIAETDFEKRDFRKVVFCMDRALEFAP
        .:...:. .   ... .::... ... ... .. : . : . :.  ..  .:. ::   
CCDS94 DDFKKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCV
         130       140       150       160       170       180     

           180       190       200       210       220         230 
pF1KE0 ACHRFKILKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCLYYE--DCIEKAVQ
          ... :.:::.   :.  .: :  .   .. . :..:.: .   :::.  :  : ...
CCDS94 WDAELRELRAECFIKEGEPRKAISDLKAASKLKNDNTEAFY-KISTLYYQLGDH-ELSLS
         190       200       210       220        230        240   

             240       250        260       270       280          
pF1KE0 FFVQALRMAPDHEKACIAC-RNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPN--
          . :..  :: : :.:  ...: :.   :.... ...: :  :   :  ..  .:.  
CCDS94 EVRECLKLDQDH-KRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSIA
           250        260       270       280       290       300  

        290       300       310       320       330       340      
pF1KE0 --NIKTNAKLYCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEE
         ..... .. :.     :: .:  .::. :.......   ..:   ::. :.  :.:.:
CCDS94 EYTVRSKERI-CH---CFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDE
            310           320       330       340       350        

        350        360       370       380       390       400     
pF1KE0 AVRDYEKVYQ-TEKTKEHKQLLKNAQLELRKSKRKDYYKILGVDKNASEDEIKKAYRKRA
       :..::: . . .:. .. .. :..::  :..:...:::::::: .::...:: ::::: :
CCDS94 AIQDYETAQEHNENDQQIREGLEKAQRLLKQSQKRDYYKILGVKRNAKKQEIIKAYRKLA
      360       370       380       390       400       410        

         410       420       430       440       450        460    
pF1KE0 LMHHPDRHSGASAEVQKEEEKKFKEVGEAFTILSDPKKKTRYDSGQD-LDEEGMNMGDFD
       :. :::  .  . : .:. :::: ... :  .::::. . ..:.:.: :: :... :  .
CCDS94 LQWHPDNFQ--NEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDDGEDPLDAESQQGGGGN
      420         430       440       450       460       470      

          470       480        490    
pF1KE0 PNNIFKAFFGGPGGFS-FEASGPGNFFFQFG
       :   :.  ...  ::. : ..::  : :.: 
CCDS94 P---FHRSWNSWQGFNPFSSGGPFRFKFHFN
           480       490       500    




494 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 21:52:12 2016 done: Sat Nov  5 21:52:13 2016
 Total Scan time:  2.840 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
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