GENSCAN 1.0	Date run:  4-Nov-116	Time: 03:37:53

Sequence gi568815595f:10716266_11038399 : 322134 bp : 47.52% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +    613    669   57  0  0   99   46    28 0.464   1.01
 1.02 Term +    695    868  174  1  0   78   48   129 0.972   5.66
 1.03 PlyA +   2635   2640    6                               1.05

 2.07 PlyA -   4304   4299    6                               1.05
 2.06 Term -  24927  24850   78  0  0    0   55   272 0.973  12.86
 2.05 Intr -  26190  25864  327  0  0   60  -19   208 0.772   3.19
 2.04 Intr -  48752  48610  143  0  2   48   88    65 0.061   2.57
 2.03 Intr -  54599  54491  109  2  1   56   80    57 0.038   1.56
 2.02 Intr -  59434  59340   95  2  2   70   67    28 0.048  -1.42
 2.01 Init -  64442  64262  181  2  1   57   96   194 0.915  16.44
 2.00 Prom -  72959  72920   40                              -3.86

 3.00 Prom +  85014  85053   40                              -3.86
 3.01 Init + 100001 100256  256  1  1  108   78   434 0.957  41.79
 3.02 Intr + 103200 103334  135  1  0  105   95    29 0.973   5.84
 3.03 Intr + 103447 103587  141  2  0  123   80   117 0.998  14.72
 3.04 Intr + 107037 107127   91  1  1   81   83    80 0.666   5.85
 3.05 Intr + 117960 118066  107  0  2   96  100    30 0.390   4.86
 3.06 Intr + 118779 118885  107  1  2   93   80    -9 0.444  -1.27
 3.07 Intr + 119342 119518  177  1  0   71   36   104 0.412   3.62
 3.08 Intr + 124216 124277   62  0  2   95   88    11 0.766  -0.67
 3.09 Intr + 127949 128081  133  2  1  133  116   132 0.967  21.15
 3.10 Intr + 135346 135399   54  0  0   90   86    13 0.254   0.48
 3.11 Intr + 158696 158830  135  1  0  114  110   152 0.997  20.76
 3.12 Intr + 179629 179740  112  0  1   51   94    57 0.001   2.55
 3.13 Intr + 186838 186929   92  2  2   70   57    77 0.003   2.51
 3.14 Intr + 195825 195928  104  2  2  118   99    52 0.992   8.27
 3.15 Intr + 202064 202188  125  2  2  123  111   120 0.819  18.03
 3.16 Intr + 209739 209851  113  1  2   99  110   146 0.175  18.00
 3.17 Intr + 212937 213074  138  2  0   62  105   151 0.975  14.86
 3.18 Intr + 215385 215438   54  2  0   85   85    26 0.657   1.18
 3.19 Intr + 216886 216988  103  0  1   84  101   190 0.995  19.65
 3.20 Intr + 217801 217901  101  2  2   65   91   177 0.999  15.53
 3.21 Intr + 218764 218934  171  0  0  100   78   255 0.721  25.84
 3.22 Intr + 221005 221116  112  0  1   66  109    16 0.099   1.45
 3.23 Intr + 224918 225003   86  0  2  135   89   -17 0.005   2.64
 3.24 Intr + 227387 227530  144  1  0   85   89    67 0.177   6.98
 3.25 Intr + 232398 232515  118  2  1   57   70    38 0.028  -1.06
 3.26 Intr + 238238 238288   51  0  0   72   72    50 0.077   0.68
 3.27 Intr + 240679 240732   54  2  0  115   91    59 0.971   7.85
 3.28 Term + 241772 241881  110  0  2   44   43   139 0.774   3.67
 3.29 PlyA + 242835 242840    6                               1.05

 4.00 Prom + 252781 252820   40                              -7.56
 4.01 Init + 255075 255124   50  2  2   48   61   130 0.857   6.72
 4.02 Intr + 261098 261146   49  2  1   97   65    32 0.103   0.48
 4.03 Intr + 269913 269970   58  2  1   84   63    70 0.038   2.56
 4.04 Intr + 285157 285206   50  2  2   98   94    54 0.467   5.40
 4.05 Intr + 294007 294162  156  0  0  108   68    33 0.411   3.51
 4.06 Intr + 295022 295060   39  1  0   84  103    15 0.250   1.02
 4.07 Intr + 299407 299468   62  0  2  140   97    22 0.945   5.83
 4.08 Intr + 300855 300896   42  0  0  101   13    95 0.606   0.66
 4.09 Intr + 300922 301184  263  1  2   59   61   566 0.902  48.13
 4.10 Intr + 301578 301709  132  1  0   87  110   133 0.935  16.02
 4.11 Intr + 302333 302433  101  0  2   79  113   168 0.992  18.23
 4.12 Intr + 303948 304057  110  2  2   69   64   158 0.906  10.58
 4.13 Intr + 306071 306203  133  2  1   68  116   119 0.921  13.35
 4.14 Intr + 309184 309318  135  0  0   86  105   276 0.978  29.86
 4.15 Intr + 309508 309611  104  0  2   86   36    85 0.798   2.07
 4.16 Intr + 309970 310094  125  1  2  134   82   264 0.992  30.63
 4.17 Intr + 312470 312582  113  0  2   89   94   119 0.998  12.70
 4.18 Intr + 312956 313087  132  1  0   28  115   214 0.510  18.94
 4.19 Intr + 314912 315014  103  1  1  120  113    71 0.999  12.55
 4.20 Intr + 317374 317474  101  2  2   92   95    39 0.999   4.83
 4.21 Intr + 318266 318433  168  1  0  139  115   137 0.999  21.64
 4.22 Term + 320597 320701  105  1  0   87   46   146 0.916   8.71
 4.23 PlyA + 321258 321263    6                              -0.45


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 186795 186929  135  2  0   77   57    97 0.960   5.65


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595f:10716266_11038399|GENSCAN_predicted_peptide_1|76_aa
MVTSTYAEVTGSGTGPEDRANSRDDLENQIHPLYSHCSLLKRVSHHPSNNRTLIRILKEE
GPVGPVAPCTEHHIIQ

>gi568815595f:10716266_11038399|GENSCAN_predicted_CDS_1|231_bp
atggtaaccagcacctatgctgaggttacaggctctgggacgggcccagaggacagggcc
aacagccgggatgatttagaaaatcaaatccacccactctattcccactgctccttgctg
aaaagggtgtcacaccatccaagtaataacaggacgctcatcagaatcctcaaggaggag
ggcccagtgggccccgtggctccgtgcactgagcaccatatcatccagtga

>gi568815595f:10716266_11038399|GENSCAN_predicted_peptide_2|310_aa
MTGADIYVLEESQDDSEVEDCDVMRKRAVAFILKTDAGGLHQGGTLEDEEGWMTEPLRKP
EGRFNNHSSYFTDKEVAAQEVRFLGQGQGTERNIAPMRTDSCDPKEEGRTCSQMPGGSPP
SLASGWVSQKITPTLEGAAGLSVLVLSLLRCCDEAKVTVWTAVPSGLHPVPGAYLQAVGV
GSPTAGRAVRERMKAEGSQCPQPTIGQASHIQAPVSGQLSFSKETGEGGGKRRGKWEEES
EKKEREEEEQREEEEEGEEEGNITASAFLELNFKFYARLILGGNYIDDDDDDDDDDDDDD
YDDNDDDDVF

>gi568815595f:10716266_11038399|GENSCAN_predicted_CDS_2|933_bp
atgactggggcagatatttatgttctggaagaatcacaggatgacagtgaagtggaagac
tgtgacgtgatgaggaaaagggctgttgctttcatcctcaagacagatgcgggtggccta
catcagggagggaccttggaggacgaggagggctggatgacagaaccactccgcaagcca
gaaggtagattcaacaaccatagttcctattttacagataaggaagttgctgctcaagaa
gtgaggttccttggtcaaggtcagggaacggaacgtaacattgctcccatgagaacggac
agctgtgacccgaaagaggaaggccggacatgcagccagatgcccgggggctcgcctccc
agcctggcaagtggctgggtgtctcagaagataactccaacactcgagggggcagccggg
cttagtgtccttgtcctgagcctgctgaggtgctgtgatgaggccaaggtcaccgtctgg
acagcagtgccatcaggactccacccagtccctggggcgtatctgcaggcagttggtgta
ggttccccaaccgctggcagagcggtgagagaaaggatgaaggctgaaggctcccagtgc
ccacagccaacaatcgggcaggcttcccacatccaggctccagtctcagggcaactcagt
tttagtaaggagactggtgaagggggagggaagaggagaggaaaatgggaggaggagagt
gagaagaaggagagggaggaagaggagcagcgggaggaggaggaggaaggggaagaggag
ggaaacatcacagcttcagctttcctggaactaaatttcaaattctatgcacgactcatc
cttgggggaaactatattgatgatgatgatgatgatgatgatgatgatgatgatgatgat
tatgatgataatgatgacgatgatgttttttga

>gi568815595f:10716266_11038399|GENSCAN_predicted_peptide_3|1061_aa
MTAEKALPLGNGKAAEEARESEAPGGGCSSGGAAPARHPRVKRDKAVHERGHWNNKVEFV
LSVAGEIIGLGNVWRFPYLCYKNGGGAFLIPYVVFFICCGIPVFFLETALGQFTSEGGIT
CWRKVCPLFEGIGYATQVIEAHLNVYYIIILAWAIFYLSNCFTTELPWATCGHEWNTENC
VEFQKLNVSNYSHVSLQNATSPVMEFWELLPVCEMWSAACFIPGAESDCCVLPLCSPVDS
GSGRLLLMLSRLSWPPPIRDTQWLLAILNADHLGGARAQPQRGSAGIKLGIKRQVQDQAL
PPTGFVISDKVAISVEPEFPLNNGVQDNYTKAPDTSSQTTGSLKTPRLSSVSGTLMTLSH
RVLAISDGIEHIGNLRWELALCLLAAWTICYFCIWKGTKSTGKALLQGLNSFSAHNNPMQ
KVVYVTATFPYIMLLILLIRGVTLPGASEGIKFYLYPDLSRLSDPQEQASSLHVQVMLMW
AAFVASRRPMMRGCLLLSPNAAQGWVNAAFVKDLRHYHSKHKPIRGHRDGFNWSVWVDAG
TQIFFSYAICLGCLTALGSYNNYNNNCYRDCIMLCCLNSGTSFVAGFAIFSVLGFMAYEQ
GVPIAEVAESGPGLAFIAYPKAVTMMPLSPLWATLFFMMLIFLGLDSQFVCVESLVTAVV
DMYPKVFRRGYRRELLILALSVISYFLGLVMLTEKICRSGLTAAFPSNCPPEGGMYIFQL
FDSYAASGMCLLFVAIFECICIGWVYGSNRFYDNIEDMIGYRPPSLIKWCWMIMTPGICA
GIFIFFLIKYKPLKYNNIYTYPAWGYGIGWLMALSSMLCIPLWICITVWKTEGTLPESLD
TNPGTWLWNACSSPRSMPEPGTVPGTEEAPINRTDRGFCGTEKSSNLPTVTQLVNIRTRK
RTQDRSLDEQVPSLPQSGEPWEKEYIGIEDLLSAGDHTRHFPMHYLALNCLGQLHDNQAS
FSRERKEAPGSAKAGPLKKFIAQRGLWHLKGSSHPTMDAAGLGAVDVGEIEYNTDPSIRC
KESLQGLCEVTCIVHRCLKQSLGRTSCHQCKPFTVIIENDV

>gi568815595f:10716266_11038399|GENSCAN_predicted_CDS_3|3186_bp
atgacggcggagaaggcgctgcccctgggcaatgggaaggctgctgaggaggcgcgggag
tccgaggcgccgggtggcggctgcagcagcgggggcgcggcgcccgcgcgccacccgcgc
gtcaagcgcgacaaggcggtccacgagcgcggccactggaacaacaaggtggagttcgtg
ctgagcgtggccggggagatcattgggctgggcaacgtgtggcgcttcccctacctgtgc
tacaagaacggaggaggggcattcctgattccctacgtggtgttttttatttgctgtgga
attcctgtttttttcctggagacagctctggggcagttcacaagtgaaggtggcattacg
tgttggaggaaagtttgccctttatttgaaggcattggctatgcaacacaggtgattgag
gcccatctgaatgtgtactacatcatcatcctggcatgggccattttttacctgagcaac
tgcttcactactgagctaccctgggctacctgtgggcatgagtggaacacagagaattgt
gtggagttccagaaactgaatgtgagcaactacagccatgtgtctctgcagaatgccacc
tcccctgtcatggagttttgggagcttcttcctgtgtgtgaaatgtggtcagctgcctgc
tttatcccaggtgcagagtcggactgctgtgtgctgcctctctgcagccctgtggactca
ggctctggaaggctgctcctgatgctctcgcgcctatcctggccaccacccatccgcgac
acacagtggcttcttgcaatccttaatgcagaccacctcggaggggccagggcacagcca
cagaggggcagcgcaggcattaaacttgggatcaagagacaggttcaagaccaggctttg
ccacctaccggttttgtgatctcggacaaggtagctatttctgtggagcctgagtttcct
ctgaacaatggtgtacaagataactacacaaaagcgcctgacacgtcttcccaaaccacg
ggctctttaaagacccccaggcttagctctgtgtctggcacactgatgacgctttcgcac
cgggtcctggccatctctgacgggatcgagcacatcgggaaccttcgctgggagctggcc
ttgtgtctcttggcagcctggaccatctgttacttctgtatctggaaggggaccaagtct
acaggaaaggccctgctccaaggccttaactcattcagtgctcacaacaaccctatgcag
aaggttgtatacgtgactgcgacattcccctacatcatgctgctgatcctcctgatacga
ggggtcacgttgcccggggcctcagagggcatcaagttctacttgtaccctgacctctcc
cggctctccgacccccaggagcaagcgtcgtctttgcatgtgcaggtgatgctcatgtgg
gcagcttttgtggcttctcgaaggcccatgatgagaggatgtctcctcctttctcctaat
gctgcccaaggatgggttaatgctgcatttgtcaaagacctaaggcattaccacagcaaa
cacaagccaattcgaggacatagagatggatttaattggtcggtctgggtagatgctgga
acgcagatctttttctcctatgccatttgcctgggctgtctgaccgctctgggaagttat
aacaattataacaacaactgctacagggactgcatcatgctctgttgcctgaacagcggc
accagcttcgtggctgggtttgccatcttctcagtcctgggttttatggcgtacgagcag
ggggtacccattgctgaggtggcagagtcaggccccggcctggcctttattgcgtacccc
aaggcggtcaccatgatgcctctctccccgctgtgggccaccttgttcttcatgatgctc
atcttcctgggcctggacagccagtttgtgtgtgtggaaagcctggtgaccgccgtggtg
gacatgtaccccaaggttttccggaggggttaccggcgggagctgctcatcctagccttg
tctgttatctcctattttctgggcctcgtgatgttaacagagaaaatctgcagatctggc
ctcacagctgcattccccagcaactgccctccagagggtggcatgtacatcttccagctc
tttgactcctatgccgccagtgggatgtgccttctcttcgtggccatctttgagtgcatc
tgcatcggctgggtgtatggaagcaaccggttctatgataacattgaagacatgattggc
taccggccaccgtcgctcattaagtggtgctggatgatcatgacccctgggatctgcgcg
gggatcttcatcttcttcttgatcaagtacaagccactcaagtacaacaacatctacacc
tacccagcctggggctatggcattggctggctcatggccctgtcctccatgctctgcatc
ccgctctggatctgcatcacagtgtggaagacggaggggacactgcccgagagcctggac
acaaacccaggcacctggctttggaacgcgtgctctagccccagatccatgccagagcct
ggcacggtgcctggcacagaggaggcacctattaatcgcacagataggggattttgcggc
acagaaaagtcaagcaatttgcccacggtaacacagctagtaaacatcaggaccagaaag
agaactcaggacaggagcttggatgaacaagtgcccagcttgccccagagtggggagcca
tgggaaaaggaatacataggcattgaagacctactcagtgctggagaccataccagacac
tttcctatgcattaccttgccctcaactgccttggccagctgcatgacaaccaggcatcg
ttcagcagggagaggaaggaggccccagggtcggcaaaggctgggcctttgaagaagttc
atagctcagcgtggtctctggcatctcaaagggtcttcccaccccaccatggatgcagct
ggtttaggagcagttgacgtgggggagattgaatataacactgatccctccatccgttgc
aaggaatctttacaaggcttatgtgaggttacgtgcatcgtgcatcgatgtttgaaacag
agcctcggcagaacaagctgtcaccagtgcaagccgttcacggtgataatcgagaacgat
gtgtga

>gi568815595f:10716266_11038399|GENSCAN_predicted_peptide_4|776_aa
MEEEEIKERFLEEEASNPAQEFLAFHGAKRTQETMKKKFEEISAFPEQRPQETLSEWDTS
LHFVEVQSQVLSGAQDSAFLTGSQVMLMLSLEEPHFEKQGPESLGNLRPQAGKAVSLSVR
WPFLGSQRETLKLTDLTQGGRRRPSGADPPPTTIRVPLSRKTAVHVDRGTPASKFRDMAT
NGSKVADGQISTEVSEAPVANDKPKTLVVKVQKKAADLPDRDTWKGRFDFLMSCVGYAIG
LGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFLLECSLGQYTSIGGLGVWKLAPMFK
GVGLAAAVLSFWLNIYYIVIISWAIYYLYNSFTTTLPWKQCDNPWNTDRCFSNYSMVNTT
NMTSAVVEFWERNMHQMTDGLDKPGQIRWPLAITLAIAWILVYFCIWKGVGWTGKVVYFS
ATYPYIMLIILFFRGVTLPGAKEGILFYITPNFRKLSDSEVWLDAATQIFFSYGLGLGSL
IALGSYNSFHNNVYRDSIIVCCINSCTSMFAGFVIFSIVGFMAHVTKRSIADVAASGPGL
AFLAYPEAVTQLPISPLWAILFFSMLLMLGIDSQFCTVEGFITALVDEYPRLLRNRRELF
IAAVCIISYLIGLSNITQGGIYVFKLFDYYSASGMSLLFLVFFECVSISWFYGVNRFYDN
IQEMVGSRPCIWWKLCWSFFTPIIVAGVFIFSAVQMTPLTMGNYVFPKWGQGVGWLMALS
SMVLIPGYMAYMFLTLKGSLKQRIQVMVQPSEDIVRPENGPEQPQAGSSTSKEAYI

>gi568815595f:10716266_11038399|GENSCAN_predicted_CDS_4|2331_bp
atggaagaagaagagatcaaggaacgcttcctggaagaagaagcatcaaacccagcccag
gagtttctggccttccacggtgcaaagagaactcaggagaccatgaaaaagaagtttgaa
gaaatcagtgcctttcccgaacagaggccccaagagaccttgtcagaatgggatacttcc
ctgcacttcgtggaggtgcagagtcaggtcttgagtggggcccaagattctgcatttctg
acaggctcccaggtgatgctgatgctgtctcttgaagaaccgcactttgagaagcaaggc
cctgaatcactgggcaatttgagaccccaggctggcaaggctgtttccttatctgtcaga
tggccttttctgggcagccagagggagactcttaaactaaccgatctcacccagggtggc
agaaggaggccttctggagctgacccacccccgacgaccatcagggtgcccttgagccgc
aaaactgctgtccacgtggaccgggggacccctgcgtccaaattccgagacatggcgacc
aacggcagcaaggtggccgacgggcagatctccaccgaggtcagcgaggcccctgtggcc
aatgacaagcccaaaaccttggtggtcaaggtgcagaagaaggcggcagacctccccgac
cgggacacgtggaagggccgcttcgacttcctcatgtcctgtgtgggctatgccatcggc
ctgggcaacgtctggaggttcccctatctctgcgggaaaaatggtgggggagccttcctg
atcccctatttcctgacactcatctttgcgggggtcccactcttcctgctggagtgctcc
ctgggccagtacacctccatcggggggctaggggtatggaagctggctcctatgttcaag
ggcgtgggccttgcggctgctgtgctatcattctggctgaacatctactacatcgtcatc
atctcctgggccatttactacctgtacaactccttcaccacgacactgccgtggaaacag
tgcgacaacccctggaacacagaccgctgcttctccaactacagcatggtcaacactacc
aacatgaccagcgctgtggtggagttctgggagcgcaacatgcatcagatgacggacggg
ctggataagccaggtcagatccgctggccactggccatcacgctggccatcgcctggatc
cttgtgtatttctgtatctggaagggtgttggctggactggaaaggtggtctacttttca
gccacatacccctacatcatgctgatcatcctgttcttccgtggagtgacgctgcccggg
gccaaggagggcatcctcttctacatcacacccaacttccgcaagctgtctgactccgag
gtgtggctggatgcggcaacccagatcttcttctcatacgggctgggcctggggtccctg
atcgctctcgggagctacaactctttccacaacaatgtctacagggactccatcatcgtc
tgctgcatcaattcgtgcaccagcatgttcgcaggattcgtcatcttctccatcgtgggc
ttcatggcccatgtcaccaagaggtccattgctgatgtggcggcctcaggccccgggctg
gcgttcctggcatacccagaggcggtgacccagctgcctatctccccactctgggccatc
ctcttcttctccatgctgttgatgctgggcattgacagccagttctgcactgtggagggc
ttcatcacagccctggtggatgagtaccccaggctcctccgcaaccgcagagagctcttc
attgctgctgtctgcatcatctcctacctgatcggtctctctaacatcactcaggggggt
atttatgtcttcaaactctttgactactactctgccagtggcatgagcctgctgttcctc
gtgttctttgaatgtgtctctatttcctggttttacggtgtcaaccgattctatgacaat
atccaagagatggttggatccaggccctgcatctggtggaaactctgctggtctttcttc
acaccaatcattgtggcgggcgtgttcattttcagtgctgtgcagatgacgccactcacc
atgggaaactatgttttccccaagtggggccagggtgtgggctggctgatggctctgtct
tccatggtcctcatccccgggtacatggcctacatgttcctcaccttaaagggctccctg
aagcagcgcatccaagtcatggtccagcccagcgaagacatcgttcgcccagagaatggt
cctgagcagccccaggcgggcagctccaccagcaaggaggcctacatctag