Result of FASTA (omim) for pF1KE0070
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0070, 560 aa
  1>>>pF1KE0070 560 - 560 aa - 560 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 8.0760+/-0.000397; mu= 8.2204+/- 0.025
 mean_var=214.0547+/-44.604, 0's: 0 Z-trim(120.4): 425  B-trim: 1722 in 1/54
 Lambda= 0.087662
 statistics sampled from 35090 (35594) to 35090 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.739), E-opt: 0.2 (0.417), width:  16
 Scan time: 11.750

The best scores are:                                      opt bits E(85289)
NP_004479 (OMIM: 173511) platelet glycoprotein V p ( 560) 3745 486.5 9.6e-137
XP_005269337 (OMIM: 603104) PREDICTED: carboxypept ( 545)  564 84.2 1.2e-15
NP_001278917 (OMIM: 603104) carboxypeptidase N sub ( 545)  564 84.2 1.2e-15
NP_001073982 (OMIM: 603104) carboxypeptidase N sub ( 545)  564 84.2 1.2e-15
NP_001276065 (OMIM: 603746) slit homolog 2 protein (1521)  512 78.0 2.4e-13
NP_004778 (OMIM: 603746) slit homolog 2 protein is (1529)  508 77.5 3.4e-13
NP_001333361 (OMIM: 606666,615311) leucine-rich re ( 927)  490 75.0 1.1e-12
NP_003052 (OMIM: 603742) slit homolog 1 protein pr (1534)  492 75.5 1.4e-12
XP_011508141 (OMIM: 606653) PREDICTED: leucine-ric ( 900)  484 74.3 1.9e-12
XP_005245461 (OMIM: 606653) PREDICTED: leucine-ric ( 924)  478 73.5 3.3e-12
XP_016857485 (OMIM: 606653) PREDICTED: leucine-ric ( 876)  471 72.6 5.8e-12
NP_001288129 (OMIM: 609791) leucine-rich repeat an ( 614)  465 71.7 7.7e-12
NP_001288124 (OMIM: 609791) leucine-rich repeat an ( 614)  465 71.7 7.7e-12
NP_001288127 (OMIM: 609791) leucine-rich repeat an ( 614)  465 71.7 7.7e-12
NP_001288116 (OMIM: 609791) leucine-rich repeat an ( 614)  465 71.7 7.7e-12
NP_001288128 (OMIM: 609791) leucine-rich repeat an ( 614)  465 71.7 7.7e-12
NP_001288123 (OMIM: 609791) leucine-rich repeat an ( 614)  465 71.7 7.7e-12
NP_001288126 (OMIM: 609791) leucine-rich repeat an ( 614)  465 71.7 7.7e-12
NP_001288118 (OMIM: 609791) leucine-rich repeat an ( 614)  465 71.7 7.7e-12
NP_001288121 (OMIM: 609791) leucine-rich repeat an ( 614)  465 71.7 7.7e-12
XP_016878171 (OMIM: 609791) PREDICTED: leucine-ric ( 614)  465 71.7 7.7e-12
NP_001288115 (OMIM: 609791) leucine-rich repeat an ( 614)  465 71.7 7.7e-12
XP_011520420 (OMIM: 609791) PREDICTED: leucine-ric ( 614)  465 71.7 7.7e-12
NP_001288120 (OMIM: 609791) leucine-rich repeat an ( 614)  465 71.7 7.7e-12
NP_116197 (OMIM: 609791) leucine-rich repeat and i ( 620)  465 71.7 7.7e-12
NP_067649 (OMIM: 606653) leucine-rich repeat-conta ( 915)  468 72.2 7.8e-12
NP_001017403 (OMIM: 606653) leucine-rich repeat-co ( 967)  468 72.3 8.1e-12
XP_016864334 (OMIM: 603746) PREDICTED: slit homolo (1495)  456 70.9 3.2e-11
XP_011508140 (OMIM: 606653) PREDICTED: leucine-ric ( 900)  447 69.6 4.9e-11
NP_001004432 (OMIM: 609794) leucine-rich repeat an ( 593)  438 68.3   8e-11
NP_055632 (OMIM: 613356) TLR4 interactor with leuc ( 811)  432 67.6 1.7e-10
XP_011512211 (OMIM: 603746) PREDICTED: slit homolo (1499)  426 67.1 4.4e-10
XP_006714049 (OMIM: 603746) PREDICTED: slit homolo (1509)  426 67.1 4.4e-10
XP_005248268 (OMIM: 603746) PREDICTED: slit homolo (1533)  426 67.1 4.5e-10
NP_001094861 (OMIM: 609792) leucine-rich repeat an ( 592)  407 64.3 1.2e-09
XP_016869793 (OMIM: 609793) PREDICTED: leucine-ric ( 606)  403 63.8 1.7e-09
XP_011516021 (OMIM: 609793) PREDICTED: leucine-ric ( 606)  403 63.8 1.7e-09
XP_016869795 (OMIM: 609793) PREDICTED: leucine-ric ( 606)  403 63.8 1.7e-09
XP_011516030 (OMIM: 609793) PREDICTED: leucine-ric ( 606)  403 63.8 1.7e-09
NP_689783 (OMIM: 609793) leucine-rich repeat and i ( 606)  403 63.8 1.7e-09
XP_016869794 (OMIM: 609793) PREDICTED: leucine-ric ( 606)  403 63.8 1.7e-09
NP_001245211 (OMIM: 609793) leucine-rich repeat an ( 606)  403 63.8 1.7e-09
XP_011516026 (OMIM: 609793) PREDICTED: leucine-ric ( 606)  403 63.8 1.7e-09
XP_016869796 (OMIM: 609793) PREDICTED: leucine-ric ( 606)  403 63.8 1.7e-09
XP_016869792 (OMIM: 609793) PREDICTED: leucine-ric ( 606)  403 63.8 1.7e-09
NP_004961 (OMIM: 601489,615961) insulin-like growt ( 605)  392 62.5 4.6e-09
NP_001139478 (OMIM: 601489,615961) insulin-like gr ( 643)  392 62.5 4.8e-09
XP_011538979 (OMIM: 608661) PREDICTED: podocan iso ( 402)  387 61.7 5.3e-09
XP_005270514 (OMIM: 608661) PREDICTED: podocan iso ( 613)  387 61.8 7.1e-09
NP_001186010 (OMIM: 608661) podocan isoform 2 [Hom ( 642)  387 61.9 7.4e-09


>>NP_004479 (OMIM: 173511) platelet glycoprotein V precu  (560 aa)
 initn: 3745 init1: 3745 opt: 3745  Z-score: 2576.0  bits: 486.5 E(85289): 9.6e-137
Smith-Waterman score: 3745; 100.0% identity (100.0% similar) in 560 aa overlap (1-560:1-560)

               10        20        30        40        50        60
pF1KE0 MLRGTLLCAVLGLLRAQPFPCPPACKCVFRDAAQCSGGDVARISALGLPTNLTHILLFGM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MLRGTLLCAVLGLLRAQPFPCPPACKCVFRDAAQCSGGDVARISALGLPTNLTHILLFGM
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 GRGVLQSQSFSGMTVLQRLMISDSHISAVAPGTFSDLIKLKTLRLSRNKITHLPGALLDK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 GRGVLQSQSFSGMTVLQRLMISDSHISAVAPGTFSDLIKLKTLRLSRNKITHLPGALLDK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 MVLLEQLFLDHNALRGIDQNMFQKLVNLQELALNQNQLDFLPASLFTNLENLKLLDLSGN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MVLLEQLFLDHNALRGIDQNMFQKLVNLQELALNQNQLDFLPASLFTNLENLKLLDLSGN
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE0 NLTHLPKGLLGAQAKLERLLLHSNRLVSLDSGLLNSLGALTELQFHRNHIRSIAPGAFDR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 NLTHLPKGLLGAQAKLERLLLHSNRLVSLDSGLLNSLGALTELQFHRNHIRSIAPGAFDR
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE0 LPNLSSLTLSRNHLAFLPSALFLHSHNLTLLTLFENPLAELPGVLFGEMGGLQELWLNRT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 LPNLSSLTLSRNHLAFLPSALFLHSHNLTLLTLFENPLAELPGVLFGEMGGLQELWLNRT
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE0 QLRTLPAAAFRNLSRLRYLGVTLSPRLSALPQGAFQGLGELQVLALHSNGLTALPDGLLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 QLRTLPAAAFRNLSRLRYLGVTLSPRLSALPQGAFQGLGELQVLALHSNGLTALPDGLLR
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE0 GLGKLRQVSLRRNRLRALPRALFRNLSSLESVQLDHNQLETLPGDVFGALPRLTEVLLGH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 GLGKLRQVSLRRNRLRALPRALFRNLSSLESVQLDHNQLETLPGDVFGALPRLTEVLLGH
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE0 NSWRCDCGLGPFLGWLRQHLGLVGGEEPPRCAGPGAHAGLPLWALPGGDAECPGPRGPPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 NSWRCDCGLGPFLGWLRQHLGLVGGEEPPRCAGPGAHAGLPLWALPGGDAECPGPRGPPP
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KE0 RPAADSSSEAPVHPALAPNSSEPWVWAQPVTTGKGQDHSPFWGFYFLLLAVQAMITVIIV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 RPAADSSSEAPVHPALAPNSSEPWVWAQPVTTGKGQDHSPFWGFYFLLLAVQAMITVIIV
              490       500       510       520       530       540

              550       560
pF1KE0 FAMIKIGQLFRKLIRERALG
       ::::::::::::::::::::
NP_004 FAMIKIGQLFRKLIRERALG
              550       560

>>XP_005269337 (OMIM: 603104) PREDICTED: carboxypeptidas  (545 aa)
 initn: 423 init1: 423 opt: 564  Z-score: 401.9  bits: 84.2 E(85289): 1.2e-15
Smith-Waterman score: 720; 32.7% identity (60.2% similar) in 477 aa overlap (1-476:1-449)

               10         20        30        40        50         
pF1KE0 MLRGTLLCAVLGLLRAQPF-PCPPACKCVFRDAAQCSGGDVARISALGLPTNLTHILLFG
       :: :. :  .  :: :.:  ::: .: : : . . ::  ..: .  : .:    .:..  
XP_005 MLPGAWLLWTSLLLLARPAQPCPMGCDC-FVQEVFCSDEELATVP-LDIPPYTKNIIFVE
               10        20         30        40         50        

      60        70        80        90       100       110         
pF1KE0 MGRGVLQSQSFSGMTVLQRLMISDSHISAVAPGTFSDLIKLKTLRLSRNKITHLPGALLD
        .  .:....:..   : .... ....    : .:. : .:. :... ... .:   ...
XP_005 TSFTTLETRAFGSNPNLTKVVFLNTQLCQFRPDAFGGLPRLEDLEVTGSSFLNLSTNIFS
       60        70        80        90       100       110        

     120       130       140       150       160       170         
pF1KE0 KMVLLEQLFLDHNALRGIDQNMFQKLVNLQELALNQNQLDFLPASLFTNLENLKLLDLSG
       ... : .: :. : :... ...::.:. :. : :. :::. ::  ::  : .:: :.:. 
XP_005 NLTSLGKLTLNFNMLEALPEGLFQHLAALESLHLQGNQLQALPRRLFQPLTHLKTLNLAQ
      120       130       140       150       160       170        

     180       190       200       210       220       230         
pF1KE0 NNLTHLPKGLLGAQAKLERLLLHSNRLVSLDSGLLNSLGALTELQFHRNHIRSIAPGAFD
       : :..::. :.   ..:. : : .: : .: .:....::.: :: .  :.:  . : .:.
XP_005 NLLAQLPEELFHPLTSLQTLKLSNNALSGLPQGVFGKLGSLQELFLDSNNISELPPQVFS
      180       190       200       210       220       230        

     240       250       260       270       280       290         
pF1KE0 RLPNLSSLTLSRNHLAFLPSALFLHSHNLTLLTLFENPLAELPGVLFGEMGGLQELWLNR
       .:  :  : :.:: .. :: ..:    :::.:.:  : :  ::. ::..   :  : :..
XP_005 QLFCLERLWLQRNAITHLPLSIFASLGNLTFLSLQWNMLRVLPAGLFAHTPCLVGLSLTH
      240       250       260       270       280       290        

     300       310       320       330       340       350         
pF1KE0 TQLRTLPAAAFRNLSRLRYLGVTLSPRLSALPQGAFQGLGELQVLALHSNGLTALPDGLL
       .::.:.  ..: .:: :: :                          :  :..: :: :..
XP_005 NQLETVAEGTFAHLSNLRSL-------------------------MLSYNAITHLPAGIF
      300       310                                320       330   

     360       370       380       390       400       410         
pF1KE0 RGLGKLRQVSLRRNRLRALPRALFRNLSSLESVQLDHNQLETLPGDVFGALPRLTEVLLG
       : : .: .. :  : : ::  :::.:::.:: ..:..::: :::  .: .   : .. : 
XP_005 RDLEELVKLYLGSNNLTALHPALFQNLSKLELLSLSKNQLTTLPEGIFDTNYNLFNLALH
           340       350       360       370       380       390   

     420       430       440       450       460       470         
pF1KE0 HNSWRCDCGLGPFLGWLRQHLGLVGGEEPPRCAGPGAHAGLPLWALPGGDAECPGPRGPP
        : :.::: :. ...::.:.   . . .   ::::.   :  . ::   .  ::  :   
XP_005 GNPWQCDCHLAYLFNWLQQYTDRLLNIQT-YCAGPAYLKGQVVPALNEKQLVCPVTRDHL
           400       410       420        430       440       450  

     480       490       500       510       520       530         
pF1KE0 PRPAADSSSEAPVHPALAPNSSEPWVWAQPVTTGKGQDHSPFWGFYFLLLAVQAMITVII
                                                                   
XP_005 GFQVTWPDESKAGGSWDLAVQERAARSQCTYSNPEGTVVLACDQAQCRWLNVQLSPQQGS
            460       470       480       490       500       510  

>>NP_001278917 (OMIM: 603104) carboxypeptidase N subunit  (545 aa)
 initn: 423 init1: 423 opt: 564  Z-score: 401.9  bits: 84.2 E(85289): 1.2e-15
Smith-Waterman score: 720; 32.7% identity (60.2% similar) in 477 aa overlap (1-476:1-449)

               10         20        30        40        50         
pF1KE0 MLRGTLLCAVLGLLRAQPF-PCPPACKCVFRDAAQCSGGDVARISALGLPTNLTHILLFG
       :: :. :  .  :: :.:  ::: .: : : . . ::  ..: .  : .:    .:..  
NP_001 MLPGAWLLWTSLLLLARPAQPCPMGCDC-FVQEVFCSDEELATVP-LDIPPYTKNIIFVE
               10        20         30        40         50        

      60        70        80        90       100       110         
pF1KE0 MGRGVLQSQSFSGMTVLQRLMISDSHISAVAPGTFSDLIKLKTLRLSRNKITHLPGALLD
        .  .:....:..   : .... ....    : .:. : .:. :... ... .:   ...
NP_001 TSFTTLETRAFGSNPNLTKVVFLNTQLCQFRPDAFGGLPRLEDLEVTGSSFLNLSTNIFS
       60        70        80        90       100       110        

     120       130       140       150       160       170         
pF1KE0 KMVLLEQLFLDHNALRGIDQNMFQKLVNLQELALNQNQLDFLPASLFTNLENLKLLDLSG
       ... : .: :. : :... ...::.:. :. : :. :::. ::  ::  : .:: :.:. 
NP_001 NLTSLGKLTLNFNMLEALPEGLFQHLAALESLHLQGNQLQALPRRLFQPLTHLKTLNLAQ
      120       130       140       150       160       170        

     180       190       200       210       220       230         
pF1KE0 NNLTHLPKGLLGAQAKLERLLLHSNRLVSLDSGLLNSLGALTELQFHRNHIRSIAPGAFD
       : :..::. :.   ..:. : : .: : .: .:....::.: :: .  :.:  . : .:.
NP_001 NLLAQLPEELFHPLTSLQTLKLSNNALSGLPQGVFGKLGSLQELFLDSNNISELPPQVFS
      180       190       200       210       220       230        

     240       250       260       270       280       290         
pF1KE0 RLPNLSSLTLSRNHLAFLPSALFLHSHNLTLLTLFENPLAELPGVLFGEMGGLQELWLNR
       .:  :  : :.:: .. :: ..:    :::.:.:  : :  ::. ::..   :  : :..
NP_001 QLFCLERLWLQRNAITHLPLSIFASLGNLTFLSLQWNMLRVLPAGLFAHTPCLVGLSLTH
      240       250       260       270       280       290        

     300       310       320       330       340       350         
pF1KE0 TQLRTLPAAAFRNLSRLRYLGVTLSPRLSALPQGAFQGLGELQVLALHSNGLTALPDGLL
       .::.:.  ..: .:: :: :                          :  :..: :: :..
NP_001 NQLETVAEGTFAHLSNLRSL-------------------------MLSYNAITHLPAGIF
      300       310                                320       330   

     360       370       380       390       400       410         
pF1KE0 RGLGKLRQVSLRRNRLRALPRALFRNLSSLESVQLDHNQLETLPGDVFGALPRLTEVLLG
       : : .: .. :  : : ::  :::.:::.:: ..:..::: :::  .: .   : .. : 
NP_001 RDLEELVKLYLGSNNLTALHPALFQNLSKLELLSLSKNQLTTLPEGIFDTNYNLFNLALH
           340       350       360       370       380       390   

     420       430       440       450       460       470         
pF1KE0 HNSWRCDCGLGPFLGWLRQHLGLVGGEEPPRCAGPGAHAGLPLWALPGGDAECPGPRGPP
        : :.::: :. ...::.:.   . . .   ::::.   :  . ::   .  ::  :   
NP_001 GNPWQCDCHLAYLFNWLQQYTDRLLNIQT-YCAGPAYLKGQVVPALNEKQLVCPVTRDHL
           400       410       420        430       440       450  

     480       490       500       510       520       530         
pF1KE0 PRPAADSSSEAPVHPALAPNSSEPWVWAQPVTTGKGQDHSPFWGFYFLLLAVQAMITVII
                                                                   
NP_001 GFQVTWPDESKAGGSWDLAVQERAARSQCTYSNPEGTVVLACDQAQCRWLNVQLSPQQGS
            460       470       480       490       500       510  

>>NP_001073982 (OMIM: 603104) carboxypeptidase N subunit  (545 aa)
 initn: 423 init1: 423 opt: 564  Z-score: 401.9  bits: 84.2 E(85289): 1.2e-15
Smith-Waterman score: 720; 32.7% identity (60.2% similar) in 477 aa overlap (1-476:1-449)

               10         20        30        40        50         
pF1KE0 MLRGTLLCAVLGLLRAQPF-PCPPACKCVFRDAAQCSGGDVARISALGLPTNLTHILLFG
       :: :. :  .  :: :.:  ::: .: : : . . ::  ..: .  : .:    .:..  
NP_001 MLPGAWLLWTSLLLLARPAQPCPMGCDC-FVQEVFCSDEELATVP-LDIPPYTKNIIFVE
               10        20         30        40         50        

      60        70        80        90       100       110         
pF1KE0 MGRGVLQSQSFSGMTVLQRLMISDSHISAVAPGTFSDLIKLKTLRLSRNKITHLPGALLD
        .  .:....:..   : .... ....    : .:. : .:. :... ... .:   ...
NP_001 TSFTTLETRAFGSNPNLTKVVFLNTQLCQFRPDAFGGLPRLEDLEVTGSSFLNLSTNIFS
       60        70        80        90       100       110        

     120       130       140       150       160       170         
pF1KE0 KMVLLEQLFLDHNALRGIDQNMFQKLVNLQELALNQNQLDFLPASLFTNLENLKLLDLSG
       ... : .: :. : :... ...::.:. :. : :. :::. ::  ::  : .:: :.:. 
NP_001 NLTSLGKLTLNFNMLEALPEGLFQHLAALESLHLQGNQLQALPRRLFQPLTHLKTLNLAQ
      120       130       140       150       160       170        

     180       190       200       210       220       230         
pF1KE0 NNLTHLPKGLLGAQAKLERLLLHSNRLVSLDSGLLNSLGALTELQFHRNHIRSIAPGAFD
       : :..::. :.   ..:. : : .: : .: .:....::.: :: .  :.:  . : .:.
NP_001 NLLAQLPEELFHPLTSLQTLKLSNNALSGLPQGVFGKLGSLQELFLDSNNISELPPQVFS
      180       190       200       210       220       230        

     240       250       260       270       280       290         
pF1KE0 RLPNLSSLTLSRNHLAFLPSALFLHSHNLTLLTLFENPLAELPGVLFGEMGGLQELWLNR
       .:  :  : :.:: .. :: ..:    :::.:.:  : :  ::. ::..   :  : :..
NP_001 QLFCLERLWLQRNAITHLPLSIFASLGNLTFLSLQWNMLRVLPAGLFAHTPCLVGLSLTH
      240       250       260       270       280       290        

     300       310       320       330       340       350         
pF1KE0 TQLRTLPAAAFRNLSRLRYLGVTLSPRLSALPQGAFQGLGELQVLALHSNGLTALPDGLL
       .::.:.  ..: .:: :: :                          :  :..: :: :..
NP_001 NQLETVAEGTFAHLSNLRSL-------------------------MLSYNAITHLPAGIF
      300       310                                320       330   

     360       370       380       390       400       410         
pF1KE0 RGLGKLRQVSLRRNRLRALPRALFRNLSSLESVQLDHNQLETLPGDVFGALPRLTEVLLG
       : : .: .. :  : : ::  :::.:::.:: ..:..::: :::  .: .   : .. : 
NP_001 RDLEELVKLYLGSNNLTALHPALFQNLSKLELLSLSKNQLTTLPEGIFDTNYNLFNLALH
           340       350       360       370       380       390   

     420       430       440       450       460       470         
pF1KE0 HNSWRCDCGLGPFLGWLRQHLGLVGGEEPPRCAGPGAHAGLPLWALPGGDAECPGPRGPP
        : :.::: :. ...::.:.   . . .   ::::.   :  . ::   .  ::  :   
NP_001 GNPWQCDCHLAYLFNWLQQYTDRLLNIQT-YCAGPAYLKGQVVPALNEKQLVCPVTRDHL
           400       410       420        430       440       450  

     480       490       500       510       520       530         
pF1KE0 PRPAADSSSEAPVHPALAPNSSEPWVWAQPVTTGKGQDHSPFWGFYFLLLAVQAMITVII
                                                                   
NP_001 GFQVTWPDESKAGGSWDLAVQERAARSQCTYSNPEGTVVLACDQAQCRWLNVQLSPQQGS
            460       470       480       490       500       510  

>>NP_001276065 (OMIM: 603746) slit homolog 2 protein iso  (1521 aa)
 initn: 694 init1: 219 opt: 512  Z-score: 360.7  bits: 78.0 E(85289): 2.4e-13
Smith-Waterman score: 512; 27.0% identity (58.8% similar) in 481 aa overlap (10-474:16-480)

                     10         20        30        40        50   
pF1KE0       MLRGTLLCAVLGLL-RAQPFPCPPACKCVFRDAAQCSGGDVARISALGLPTNLT
                      ::..: .. :  ::  :.:   ....: :  .  .   ..: :  
NP_001 MRGVGWQMLSLSLGLVLAILNKVAPQACPAQCSCS-GSTVDCHGLALRSVPR-NIPRNTE
               10        20        30         40        50         

            60        70        80        90       100       110   
pF1KE0 HILLFGMGRGVLQSQSFSGMTVLQRLMISDSHISAVAPGTFSDLIKLKTLRLSRNKITHL
       .. : : .   . . .:.:.  :. :.. ...::..  :.:.:: .:. :::.::..  .
NP_001 RLDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLF
       60        70        80        90       100       110        

           120       130       140       150       160       170   
pF1KE0 PGALLDKMVLLEQLFLDHNALRGIDQNMFQKLVNLQELALNQNQLDFLPASLFTNLENLK
       :  :.   . : .: :..: ...: .. :.  :....: :. ::.. .  . :  :..:.
NP_001 PELLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLE
      120       130       140       150       160       170        

           180       190       200       210       220       230   
pF1KE0 LLDLSGNNLTHLPKGLLGAQAKLERLLLHSNRLVSLDSGLLNSLGALTELQFHRNHI---
       .: :..::.:.:  . .. . ::. . :::: :   :      :. :..   .: ..   
NP_001 VLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYC-DC----HLAWLSDWLRQRPRVGLY
      180       190       200       210            220       230   

               240           250        260            270         
pF1KE0 -RSIAPGAFDRLPNLSSLT----LSRNHLAFL-PSALFLH-----SHNLTLLTLFENPLA
        . ..:. . :  :.. .     .  .: .:. ::   ::     . . ...    . :.
NP_001 TQCMGPSHL-RGHNVAEVQKREFVCSGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLT
           240        250       260       270       280       290  

     280       290       300       310       320       330         
pF1KE0 ELPGVLFGEMGGLQELWLNRTQLRTLPAAAFRNLSRLRYLGVTLSPRLSALPQGAFQGLG
       :.:  :  :   . :. :... ....: .::   ..:: . .. . ..: :   ::::: 
NP_001 EIPTNL-PET--ITEIRLEQNTIKVIPPGAFSPYKKLRRIDLS-NNQISELAPDAFQGLR
             300         310       320       330        340        

     340       350       360       370       380       390         
pF1KE0 ELQVLALHSNGLTALPDGLLRGLGKLRQVSLRRNRLRALPRALFRNLSSLESVQLDHNQL
        :. :.:..: .: :: .:..:: .:. . :  :..  :    :..: .:. ..:  :.:
NP_001 SLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKL
      350       360       370       380       390       400        

     400       410       420       430       440        450        
pF1KE0 ETLPGDVFGALPRLTEVLLGHNSWRCDCGLGPFLGWLRQHLGLVGGEEP-PRCAGPGAHA
       .:.   .:. :  .  . :..: . :::     : :: ..:     :    ::..:   :
NP_001 QTIAKGTFSPLRAIQTMHLAQNPFICDC----HLKWLADYLHTNPIETSGARCTSPRRLA
      410       420       430           440       450       460    

      460       470       480       490       500       510        
pF1KE0 GLPLWALPGGDAECPGPRGPPPRPAADSSSEAPVHPALAPNSSEPWVWAQPVTTGKGQDH
       .  .  . .   .: :                                            
NP_001 NKRIGQIKSKKFRCSGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPEHIP
          470       480       490       500       510       520    

>>NP_004778 (OMIM: 603746) slit homolog 2 protein isofor  (1529 aa)
 initn: 694 init1: 219 opt: 508  Z-score: 357.9  bits: 77.5 E(85289): 3.4e-13
Smith-Waterman score: 508; 27.8% identity (59.7% similar) in 461 aa overlap (10-454:16-460)

                     10         20        30        40        50   
pF1KE0       MLRGTLLCAVLGLL-RAQPFPCPPACKCVFRDAAQCSGGDVARISALGLPTNLT
                      ::..: .. :  ::  :.:   ....: :  . :    ..: :  
NP_004 MRGVGWQMLSLSLGLVLAILNKVAPQACPAQCSCS-GSTVDCHGLAL-RSVPRNIPRNTE
               10        20        30         40         50        

            60        70        80        90       100       110   
pF1KE0 HILLFGMGRGVLQSQSFSGMTVLQRLMISDSHISAVAPGTFSDLIKLKTLRLSRNKITHL
       .. : : .   . . .:.:.  :. :.. ...::..  :.:.:: .:. :::.::..  .
NP_004 RLDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLF
       60        70        80        90       100       110        

           120       130       140       150       160       170   
pF1KE0 PGALLDKMVLLEQLFLDHNALRGIDQNMFQKLVNLQELALNQNQLDFLPASLFTNLENLK
       :  :.   . : .: :..: ...: .. :.  :....: :. ::.. .  . :  :..:.
NP_004 PELLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLE
      120       130       140       150       160       170        

           180       190       200       210       220       230   
pF1KE0 LLDLSGNNLTHLPKGLLGAQAKLERLLLHSNRLVSLDSGLLNSLGALTELQFHRNHI---
       .: :..::.:.:  . .. . ::. . :::: :   :      :. :..   .: ..   
NP_004 VLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYC-DC----HLAWLSDWLRQRPRVGLY
      180       190       200       210            220       230   

               240           250        260            270         
pF1KE0 -RSIAPGAFDRLPNLSSLT----LSRNHLAFL-PSALFLH-----SHNLTLLTLFENPLA
        . ..:. . :  :.. .     .  .: .:. ::   ::     . . ...    . :.
NP_004 TQCMGPSHL-RGHNVAEVQKREFVCSGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLT
           240        250       260       270       280       290  

     280       290       300       310       320       330         
pF1KE0 ELPGVLFGEMGGLQELWLNRTQLRTLPAAAFRNLSRLRYLGVTLSPRLSALPQGAFQGLG
       :.:  :  :   . :. :... ....: .::   ..:: . .. . ..: :   ::::: 
NP_004 EIPTNL-PET--ITEIRLEQNTIKVIPPGAFSPYKKLRRIDLS-NNQISELAPDAFQGLR
             300         310       320       330        340        

     340       350       360       370       380       390         
pF1KE0 ELQVLALHSNGLTALPDGLLRGLGKLRQVSLRRNRLRALPRALFRNLSSLESVQLDHNQL
        :. :.:..: .: :: .:..:: .:. . :  :..  :    :..: .:. ..:  :.:
NP_004 SLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKL
      350       360       370       380       390       400        

     400       410       420       430       440        450        
pF1KE0 ETLPGDVFGALPRLTEVLLGHNSWRCDCGLGPFLGWLRQHLGLVGGEEP-PRCAGPGAHA
       .:.   .:. :  .  . :..: . :::     : :: ..:     :    ::..:    
NP_004 QTIAKGTFSPLRAIQTMHLAQNPFICDC----HLKWLADYLHTNPIETSGARCTSPRRLA
      410       420       430           440       450       460    

      460       470       480       490       500       510        
pF1KE0 GLPLWALPGGDAECPGPRGPPPRPAADSSSEAPVHPALAPNSSEPWVWAQPVTTGKGQDH
                                                                   
NP_004 NKRIGQIKSKKFRCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKL
          470       480       490       500       510       520    

>>NP_001333361 (OMIM: 606666,615311) leucine-rich repeat  (927 aa)
 initn: 331 init1: 222 opt: 490  Z-score: 348.4  bits: 75.0 E(85289): 1.1e-12
Smith-Waterman score: 490; 28.0% identity (58.4% similar) in 418 aa overlap (6-416:7-418)

                10               20        30        40        50  
pF1KE0  MLRGTLLCAV-LGLLR------AQPFPCPPACKCVFRDAAQCSGGDVARISALGLPTNL
             ::: . ::::       : :  :   :.:     ..:::  .. .   :: .  
NP_001 MPGPLGLLCFLALGLLGSAGPSGAAPPLCAAPCSCDGDRRVDCSGKGLTAVPE-GLSAFT
               10        20        30        40        50          

             60        70        80        90       100       110  
pF1KE0 THILLFGMGRGVLQSQSFSGMTVLQRLMISDSHISAVAPGTFSDLIKLKTLRLSRNKITH
         . : :   . .. ...::.  :. : ........:   ..  :  :..:::. :.:: 
NP_001 QALQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITS
      60        70        80        90       100       110         

            120       130       140       150       160       170  
pF1KE0 LPGALLDKMVLLEQLFLDHNALRGIDQNMFQKLVNLQELALNQNQLDFLPASLFTNLENL
       .:   .. .: :..:.:: :.:  .  . ...: .:: :.:  :... .:   :::: .:
NP_001 VPEDSFEGLVQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSL
     120       130       140       150       160       170         

            180       190       200       210       220       230  
pF1KE0 KLLDLSGNNLTHLPKGLLGAQAKLERLLLHSNRLVSLDSGLLNSLGALTELQFHRNHIRS
        .: : .:..  : .  . .  .:: : :. : :  . ... ..: .: :: :: : :  
NP_001 VVLHLHNNKIRSLSQHCFDGLDNLETLDLNYNNLGEFPQAI-KALPSLKELGFHSNSISV
     180       190       200       210       220        230        

            240       250       260       270       280       290  
pF1KE0 IAPGAFDRLPNLSSLTLSRNHLAFLPSALFLHSHNLTLLTLFENPLAELPGVLFGEMGGL
       :  ::::  : : .. :  : :.:. .. : .  .:  :..    ...    : : .  :
NP_001 IPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQQFPNLTGTVH-L
      240       250       260       270       280       290        

            300       310       320       330       340       350  
pF1KE0 QELWLNRTQLRTLPAAAFRNLSRLRYLGVTLSPRLSALPQGAFQGLGELQVLALHSNGLT
       . : :. :.. ..:    .. . :: : .. .  .  ::  .:.:   :. ..:. : . 
NP_001 ESLTLTGTKISSIPNNLCQEQKMLRTLDLSYN-NIRDLP--SFNGCHALEEISLQRNQIY
       300       310       320        330         340       350    

            360       370       380       390       400       410  
pF1KE0 ALPDGLLRGLGKLRQVSLRRNRLRALPRALFRNLSSLESVQLDHNQLETLPGDVFGALPR
        . .: ..:: .:: ..: :: .. .    : .:. . ..... :.: ..: . ...: .
NP_001 QIKEGTFQGLISLRILDLSRNLIHEIHSRAFATLGPITNLDVSFNELTSFPTEGLNGLNQ
          360       370       380       390       400       410    

            420       430       440       450       460       470  
pF1KE0 LTEVLLGHNSWRCDCGLGPFLGWLRQHLGLVGGEEPPRCAGPGAHAGLPLWALPGGDAEC
       :  :                                                        
NP_001 LKLVGNFKLKEALAAKDFVNLRSLSVPYAYQCCAFWGCDSYANLNTEDNSLQDHSVAQEK
          420       430       440       450       460       470    

>>NP_003052 (OMIM: 603742) slit homolog 1 protein precur  (1534 aa)
 initn: 667 init1: 237 opt: 492  Z-score: 347.0  bits: 75.5 E(85289): 1.4e-12
Smith-Waterman score: 495; 27.1% identity (59.5% similar) in 454 aa overlap (21-454:34-469)

                         10        20        30        40        50
pF1KE0           MLRGTLLCAVLGLLRAQPFPCPPACKCVFRDAAQCSGGDVARISALGLPT
                                     ::  : :.   ...: :  .  :   ..: 
NP_003 TPGWGSSAGPVRPELWLLLWAAAWRLGASACPALCTCT-GTTVDCHGTGLQAIPK-NIPR
            10        20        30        40         50         60 

               60        70        80        90       100       110
pF1KE0 NLTHILLFGMGRGVLQSQSFSGMTVLQRLMISDSHISAVAPGTFSDLIKLKTLRLSRNKI
       :  .. : : .   .....:.:.  :. :.. ...:.::  :.:.:. .:. :::.::..
NP_003 NTERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQL
              70        80        90       100       110       120 

              120       130       140       150       160       170
pF1KE0 THLPGALLDKMVLLEQLFLDHNALRGIDQNMFQKLVNLQELALNQNQLDFLPASLFTNLE
         ::  :...   : .: :..::...: .. :.  ..:..: :..::.. .  . :  :.
NP_003 HMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALR
             130       140       150       160       170       180 

              180       190       200             210              
pF1KE0 NLKLLDLSGNNLTHLPKGLLGAQAKLERLLLHSNRLVS------LDS--------GLLN-
       .:..: :..::.: .: . .. . ::. . ::::.:        :..        ::.. 
NP_003 GLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQ
             190       200       210       220       230       240 

              220       230       240       250       260       270
pF1KE0 -----SLGALTELQFHRNHIRSIAPGAFDRLPNLSSLTLSRNHLAFLPSALFLHSHNLTL
            :: .:.  . .....   . :   :.:   . ::: .     : :.   :..  .
NP_003 CSGPASLRGLNVAEVQKSEFSCSGQGEAGRVP---TCTLSSGS---CP-AMCTCSNG--I
             250       260       270          280           290    

              280       290       300       310       320       330
pF1KE0 LTLFENPLAELPGVLFGEMGGLQELWLNRTQLRTLPAAAFRNLSRLRYLGVTLSPRLSAL
       .    . :. .:. :   :    :. :. . ....: .::    .:: . .. . ... .
NP_003 VDCRGKGLTAIPANLPETM---TEIRLELNGIKSIPPGAFSPYRKLRRIDLS-NNQIAEI
            300       310          320       330       340         

              340       350       360       370       380       390
pF1KE0 PQGAFQGLGELQVLALHSNGLTALPDGLLRGLGKLRQVSLRRNRLRALPRALFRNLSSLE
          :::::  :. :.:..: .: :: :.. ::  :. . :  :..  .    :..:..: 
NP_003 APDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLS
      350       360       370       380       390       400        

              400       410       420       430       440       450
pF1KE0 SVQLDHNQLETLPGDVFGALPRLTEVLLGHNSWRCDCGLGPFLGWLRQHLGLVGGEEPPR
        ..:  :....:   .: .:  .  . :..: . :::.:  .  .:: .   ..:    :
NP_003 LLSLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGA---R
      410       420       430       440       450       460        

              460       470       480       490       500       510
pF1KE0 CAGPGAHAGLPLWALPGGDAECPGPRGPPPRPAADSSSEAPVHPALAPNSSEPWVWAQPV
       ::.:                                                        
NP_003 CASPRRLANKRIGQIKSKKFRCSAKEQYFIPGTEDYQLNSECNSDVVCPHKCRCEANVVE
         470       480       490       500       510       520     

>--
 initn: 285 init1: 219 opt: 298  Z-score: 214.4  bits: 51.0 E(85289): 3.3e-05
Smith-Waterman score: 298; 31.1% identity (61.1% similar) in 193 aa overlap (294-482:544-732)

           270       280       290       300        310       320  
pF1KE0 HSHNLTLLTLFENPLAELPGVLFGEMGGLQELWLNRTQLRTLPAAA-FRNLSRLRYLGVT
                                     :: :: ...  : :.. :..:..:. ....
NP_003 PHKCRCEANVVECSSLKLTKIPERIPQSTAELRLNNNEISILEATGMFKKLTHLKKINLS
           520       530       540       550       560       570   

            330       340       350       360       370       380  
pF1KE0 LSPRLSALPQGAFQGLGELQVLALHSNGLTALPDGLLRGLGKLRQVSLRRNRLRALPRAL
        . ..: . .:::.: . .. : : .: : .. .:..:::  :: . :: ::.  .    
NP_003 -NNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDS
            580       590       600       610       620       630  

            390       400       410       420       430       440  
pF1KE0 FRNLSSLESVQLDHNQLETLPGDVFGALPRLTEVLLGHNSWRCDCGLGPFLGWLRQHLGL
       : .: ... ..:  ::. :.   .: .:  :. . :  : . :.: :. . ::::..  .
NP_003 FTGLRNVRLLSLYDNQITTVSPGAFDTLQSLSTLNLLANPFNCNCQLAWLGGWLRKRKIV
            640       650       660       670       680       690  

            450       460       470          480       490         
pF1KE0 VGGEEPPRCAGPGAHAGLPLWALPGGDAECP-GPR--GPPPRPAADSSSEAPVHPALAPN
       .:.   ::: .:     .::  .   : .:  : .  :  :::                 
NP_003 TGN---PRCQNPDFLRQIPLQDVAFPDFRCEEGQEEGGCLPRPQCPQECACLDTVVRCSN
               700       710       720       730       740         

     500       510       520       530       540       550         
pF1KE0 SSEPWVWAQPVTTGKGQDHSPFWGFYFLLLAVQAMITVIIVFAMIKIGQLFRKLIRERAL
                                                                   
NP_003 KHLRALPKGIPKNVTELYLDGNQFTLVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQ
     750       760       770       780       790       800         

>>XP_011508141 (OMIM: 606653) PREDICTED: leucine-rich re  (900 aa)
 initn: 596 init1: 299 opt: 484  Z-score: 344.5  bits: 74.3 E(85289): 1.9e-12
Smith-Waterman score: 484; 28.1% identity (57.3% similar) in 424 aa overlap (57-473:3-414)

         30        40        50        60        70        80      
pF1KE0 CVFRDAAQCSGGDVARISALGLPTNLTHILLFGMGRGVLQSQSFSGMTVLQRLMISD---
                                     : : ::..  .:..:     .:    :   
XP_011                             MRLEGEGRSARAGQNLSRAGSARRGAPRDLSM
                                           10        20        30  

            90       100       110       120       130       140   
pF1KE0 SHISAVAPGTFSDLIKLKTLRLSRNKITHLPGALLDKMVLLEQLFLDHNALRGIDQNMFQ
       .... . :: :  :  :. :::: :...:.::  .. .  :. :.:..: : ::  . . 
XP_011 NNLTELQPGLFHHLRFLEELRLSGNHLSHIPGQAFSGLYSLKILMLQNNQLGGIPAEALW
             40        50        60        70        80        90  

           150       160       170       180       190       200   
pF1KE0 KLVNLQELALNQNQLDFLPASLFTNLENLKLLDLSGNNLTHLPKGLLGAQAKLERLLLHS
       .: .:: : :. : ....:   : .: .:. : :. : ::..:   :.    :. . :  
XP_011 ELPSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLAL
            100       110       120       130       140       150  

           210       220       230       240       250       260   
pF1KE0 NRLVSLDSGLLNSLGALTELQFHRNHIRSIAPGAFDRLPNLSSLTLSRNHLAFLPSALFL
       ::.  . .  ...: .:. :..: :.:. ..  .:. : :: .: :. :.:  .: :.  
XP_011 NRISHIPDYAFQNLTSLVVLHLHNNRIQHLGTHSFEGLHNLETLDLNYNKLQEFPVAIRT
            160       170       180       190       200       210  

           270       280       290         300       310       320 
pF1KE0 HSHNLTLLTLFENPLAELPGVLFGEMGG--LQELWLNRTQLRTLPAAAFRNLSRLRYLGV
        .. :  : . .: .  .:   :  ::.  :: . .  . .. .  .::. : .:. :..
XP_011 LGR-LQELGFHNNNIKAIPEKAF--MGNPLLQTIHFYDNPIQFVGRSAFQYLPKLHTLSL
             220       230         240       250       260         

             330       340       350       360       370       380 
pF1KE0 TLSPRLSALPQGAFQGLGELQVLALHSNGLTALPDGLLRGLGKLRQVSLRRNRLRALPRA
       . .  .. .:.  ..:   :..:.:   :.  ::.:. . : .:: . : .:... :: .
XP_011 NGAMDIQEFPD--LKGTTSLEILTLTRAGIRLLPSGMCQQLPRLRVLELSHNQIEELP-S
     270       280         290       300       310       320       

             390       400       410       420         430         
pF1KE0 LFRNLSSLESVQLDHNQLETLPGDVFGALPRLTEVLLGHNSWRCD--CGLGPFLGWLRQH
       : :  ..:: . :.::..  . .:.:. :  :  . :  :.       ::: ..     :
XP_011 LHRC-QKLEEIGLQHNRIWEIGADTFSQLSSLQALDLTDNQLTTLPLAGLGGLM-----H
        330        340       350       360       370            380

     440       450       460       470       480       490         
pF1KE0 LGLVGGEEPPRCAGPGAHAGLPLWALPGGDAECPGPRGPPPRPAADSSSEAPVHPALAPN
       : : :.    .  .  .   : .  .: .   ::                          
XP_011 LKLKGNLALSQAFSKDSFPKLRILEVPYAYQCCPYGMCASFFKASGQWEAEDLHLDDEES
              390       400       410       420       430       440

     500       510       520       530       540       550         
pF1KE0 SSEPWVWAQPVTTGKGQDHSPFWGFYFLLLAVQAMITVIIVFAMIKIGQLFRKLIRERAL
                                                                   
XP_011 SKRPLGLLARQAENHYDQDLDELQLEMEDSKPHPSVQCSPTPGPFKPCEYLFESWGIRLA
              450       460       470       480       490       500

>>XP_005245461 (OMIM: 606653) PREDICTED: leucine-rich re  (924 aa)
 initn: 627 init1: 299 opt: 478  Z-score: 340.2  bits: 73.5 E(85289): 3.3e-12
Smith-Waterman score: 478; 29.2% identity (60.3% similar) in 373 aa overlap (57-424:3-368)

         30        40        50        60        70        80      
pF1KE0 CVFRDAAQCSGGDVARISALGLPTNLTHILLFGMGRGVLQSQSFSGMTVLQRLMISD---
                                     : : ::..  .:..:     .:    :   
XP_005                             MRLEGEGRSARAGQNLSRAGSARRGAPRDLSM
                                           10        20        30  

            90       100       110       120       130       140   
pF1KE0 SHISAVAPGTFSDLIKLKTLRLSRNKITHLPGALLDKMVLLEQLFLDHNALRGIDQNMFQ
       .... . :: :  :  :. :::: :...:.::  .. .  :. :.:..: : ::  . . 
XP_005 NNLTELQPGLFHHLRFLEELRLSGNHLSHIPGQAFSGLYSLKILMLQNNQLGGIPAEALW
             40        50        60        70        80        90  

           150       160       170       180       190       200   
pF1KE0 KLVNLQELALNQNQLDFLPASLFTNLENLKLLDLSGNNLTHLPKGLLGAQAKLERLLLHS
       .: .:: : :. : ....:   : .: .:. : :. : ::..:   :.    :. . :  
XP_005 ELPSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLAL
            100       110       120       130       140       150  

           210       220       230       240       250       260   
pF1KE0 NRLVSLDSGLLNSLGALTELQFHRNHIRSIAPGAFDRLPNLSSLTLSRNHLAFLPSALFL
       ::.  . .  ...: .:. :..: :.:. ..  .:. : :: .: :. :.:  .: :.  
XP_005 NRISHIPDYAFQNLTSLVVLHLHNNRIQHLGTHSFEGLHNLETLDLNYNKLQEFPVAIRT
            160       170       180       190       200       210  

           270       280       290         300       310       320 
pF1KE0 HSHNLTLLTLFENPLAELPGVLFGEMGG--LQELWLNRTQLRTLPAAAFRNLSRLRYLGV
        .. :  : . .: .  .:   :  ::.  :: . .  . .. .  .::. : .:. :..
XP_005 LGR-LQELGFHNNNIKAIPEKAF--MGNPLLQTIHFYDNPIQFVGRSAFQYLPKLHTLSL
             220       230         240       250       260         

             330       340       350       360       370       380 
pF1KE0 TLSPRLSALPQGAFQGLGELQVLALHSNGLTALPDGLLRGLGKLRQVSLRRNRLRALPRA
       . .  .. .:.  ..:   :..:.:   :.  ::.:. . : .:: . : .:... :: .
XP_005 NGAMDIQEFPD--LKGTTSLEILTLTRAGIRLLPSGMCQQLPRLRVLELSHNQIEELP-S
     270       280         290       300       310       320       

             390       400       410       420       430       440 
pF1KE0 LFRNLSSLESVQLDHNQLETLPGDVFGALPRLTEVLLGHNSWRCDCGLGPFLGWLRQHLG
       : :  ..:: . :.::..  . .:.:. :  :  . :. :. :                 
XP_005 LHRC-QKLEEIGLQHNRIWEIGADTFSQLSSLQALDLSWNAIRSIHPEAFSTLHSLVKLD
        330        340       350       360       370       380     

             450       460       470       480       490       500 
pF1KE0 LVGGEEPPRCAGPGAHAGLPLWALPGGDAECPGPRGPPPRPAADSSSEAPVHPALAPNSS
                                                                   
XP_005 LTDNQLTTLPLAGLGGLMHLKLKGNLALSQAFSKDSFPKLRILEVPYAYQCCPYGMCASF
         390       400       410       420       430       440     




560 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 04:30:19 2016 done: Fri Nov  4 04:30:21 2016
 Total Scan time: 11.750 Total Display time:  0.090

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com