GENSCAN 1.0	Date run:  4-Nov-116	Time: 04:53:33

Sequence gi568815597r:8903303_9126345 : 223043 bp : 48.40% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -   1701   1696    6                               1.05
 1.02 Term -   5369   5228  142  1  1   74   47   103 0.572   2.20
 1.01 Init -  18252  18164   89  0  2   96   99   118 0.393  12.55
 1.00 Prom -  35587  35548   40                              -0.76

 2.00 Prom +  40846  40885   40                              -1.76
 2.01 Init +  42585  42663   79  2  1   96   99   164 0.931  17.54
 2.02 Intr +  45961  46140  180  2  0   80  110   156 0.931  16.84
 2.03 Intr +  53835  53983  149  1  2  102   67   177 0.916  16.95
 2.04 Intr +  55608  55700   93  2  0  114   99    99 0.996  13.76
 2.05 Intr +  59285  59354   70  1  1  132  110    83 0.998  13.65
 2.06 Intr +  64357  64514  158  2  2   99   95    93 0.949  10.83
 2.07 Intr +  67565  67679  115  1  1   99   96   142 0.965  16.12
 2.08 Intr +  78752  78867  116  0  2   36   74    90 0.088   2.57
 2.09 Intr +  82108  82246  139  0  1   95   -1    58 0.367  -2.36
 2.10 Term +  88348  88538  191  2  2   86   36   129 0.674   5.11
 2.11 PlyA +  89657  89662    6                               1.05

 3.13 PlyA -  90333  90328    6                               1.05
 3.12 Term - 100216  99998  219  1  0  103   40   235 0.820  17.24
 3.11 Intr - 101577 101450  128  1  2  131  109   109 0.997  17.70
 3.10 Intr - 104083 104008   76  1  1  113   81   138 0.915  14.69
 3.09 Intr - 106942 106841  102  1  0  123   41   215 0.926  20.67
 3.08 Intr - 110333 110223  111  2  0   94  109   168 0.998  20.08
 3.07 Intr - 111566 111379  188  0  2   88   80   326 0.994  31.21
 3.06 Intr - 111940 111815  126  2  0   90   86   185 0.980  19.15
 3.05 Intr - 115073 114921  153  0  0   82   91   165 0.999  16.24
 3.04 Intr - 116031 115907  125  2  2   90   82   222 0.999  22.03
 3.03 Intr - 119801 119616  186  1  0   41   97    94 0.587   4.40
 3.02 Intr - 121772 121663  110  2  2   63   86   177 0.565  14.08
 3.01 Init - 123043 122993   51  1  0   80   98    -5 0.737   0.86
 3.00 Prom - 128090 128051   40                              -3.96

 4.15 PlyA - 129927 129922    6                               1.05
 4.14 Term - 134487 134284  204  0  0  107   41   335 0.997  28.07
 4.13 Intr - 134722 134595  128  2  2   99  109   166 0.999  20.20
 4.12 Intr - 135204 135129   76  0  1  112   62   114 0.780  10.29
 4.11 Intr - 135366 135274   93  0  0   45   52    79 0.392   0.16
 4.10 Intr - 135627 135526  102  0  0   97   94   114 0.999  13.27
 4.09 Intr - 136360 136250  111  1  0   88   78   351 0.841  34.68
 4.08 Intr - 136685 136498  188  0  2   76    6   486 0.629  38.61
 4.07 Intr - 136887 136762  126  1  0   74   92   221 0.977  21.75
 4.06 Intr - 138635 138483  153  0  0   97  101   202 0.998  22.44
 4.05 Intr - 144432 144308  125  2  2  110   97   -32 0.393   0.13
 4.04 Intr - 145968 145798  171  2  0   40   61    95 0.084   1.06
 4.03 Intr - 154306 154146  161  1  2   79  110    49 0.212   4.99
 4.02 Intr - 154948 154850   99  1  0   76   82   119 0.177  10.41
 4.01 Init - 168490 168371  120  1  0  100   51   145 0.062  10.19
 4.00 Prom - 173092 173053   40                              -2.16

 5.05 PlyA - 173345 173340    6                               1.05
 5.04 Term - 200942 200797  146  0  2   76   55    96 0.602   3.17
 5.03 Intr - 202142 201977  166  2  1   93   65   -11 0.266  -3.37
 5.02 Intr - 202378 202184  195  1  0   71   53   405 0.783  34.91
 5.01 Intr - 208187 207974  214  1  1  130   66   379 0.534  38.62

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 218715 218790   76  2  1   89   56   100 0.879   6.20
S.002 Term + 218890 218975   86  2  2   95   47    77 0.979   2.12


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:8903303_9126345|GENSCAN_predicted_peptide_1|76_aa
MEELKAWRLEEALDPALGLSGKKESVKDSSAAGLESPRLSWSRQAVPNMGAHIRVKGSPE
RQLENVKLNWRTPEYS

>gi568815597r:8903303_9126345|GENSCAN_predicted_CDS_1|231_bp
atggaggaactaaaggcctggaggctggaggaagcccttgacccagcgctgggtctttcg
ggcaagaaagagtcggtcaaggattccagtgccgccgggttagagtctccgcgactgagc
tggtctcggcaagcggtgcccaacatgggggctcacatccgggtcaaagggtcgccggag
cgacagttggagaacgtgaaactaaactggaggacacccgagtactcttaa

>gi568815597r:8903303_9126345|GENSCAN_predicted_peptide_2|429_aa
MRALVLLLSLFLLGGQAQHVSDWTYSEGALDEAHWPQHYPACGGQRQSPINLQRTKVRYN
PSLKGLNMTGYETQAGEFPMVNNGHTVQISLPSTMRMTVADGTVYIAQQMHFHWGGASSE
ISGSEHTVDGIRHVIEIHIVHYNSKYKSYDIAQDAPDGLAVLAAFVEVKNYPENTYYSNF
ISHLANIKYPGQRTTLTGLDVQDMLPRNLQHYYTYHGSLTTPPCTENVHWFVLADFVKLS
RTQVWKLENSLLDHRNKTIHNDYRRTQPLNHRVVESNFPNQGRQPLETLSSVNITEHEIR
VHTVLLETQATEECVIRHEEGGLAYGSGCTVALERICPVGGKGCPLGGIMVVSRNLLHWI
PGLEEPHLCETQRLLFVLPSSQSMCFEWDVSACYNLLATRIVFRDRCDQGAQSGPTPECG
GTQPQHVQN

>gi568815597r:8903303_9126345|GENSCAN_predicted_CDS_2|1290_bp
atgagggccctggtgcttctgctgtccctgttcctgctgggtggccaggcccagcatgtg
tctgactggacctactcagaaggggcactggacgaagcgcactggccacagcactacccc
gcctgtgggggccagagacagtcgcctatcaacctacagaggacgaaggtgcggtacaac
ccctccttgaaggggctcaatatgacaggctatgagacccaggcaggggagttccccatg
gtcaacaatggccacacagtgcagatcagcctgccctccaccatgcgcatgacagtggct
gacggcactgtatacatagcccagcagatgcactttcactggggaggtgcgtcctcggag
atcagcggctctgagcacaccgtggacgggatcagacatgtgatcgagattcacattgtt
cactacaattctaaatacaagagctatgatatagcccaagatgcgccggatggtttggct
gtactggcagccttcgttgaggtgaagaattaccctgaaaacacttattacagcaacttc
atttctcatctggccaacatcaagtacccaggacaaagaacaaccctgactggccttgac
gttcaggacatgctgcccaggaacctccagcactactacacctaccatggctcactcacc
acgcctccctgcactgagaacgtccactggtttgtgctggcagattttgtcaagctctcc
aggacacaggtttggaagctggagaattccttactggatcaccgcaacaagaccatccac
aacgattaccgcaggacccagcccctgaaccacagagtggtggaatccaacttcccgaat
cagggccgacaacctttggaaacactgagcagtgttaacatcactgaacacgaaataaga
gtacacactgtgcttctggaaactcaggccacagaagaatgtgtaattcgccatgaagaa
ggagggctcgcctatggaagcggctgcacagtggctctagaaagaatatgtcctgtagga
gggaagggctgccctctgggtggaatcatggtggtctccagaaatctcctccactggatt
cctgggctggaggagccacatctctgtgagacacagcggctgctcttcgtcctccccagt
tctcagtccatgtgttttgagtgggatgtgtcagcgtgctacaacctgttggctacaagg
attgttttccgggatagatgtgatcaaggagcccaatcaggtcccaccccagaatgtggg
gggactcaaccacaacatgtacaaaactaa

>gi568815597r:8903303_9126345|GENSCAN_predicted_peptide_3|524_aa
MENKEAGTPPPIPSREGRLQPTLLLATLSAAFGSAFQYGYNLSVVNTPHKVGTSCGWGNV
FQVFKSFYNETYFERHATFMDGKLMLLLWSCTVSMFPLGGLLGSLLVGLLVDSCGRKGTL
LINNIFAIIPAILMGVSKVAKAFELIVFSRVVLGVCAGISYSALPMYLGELAPKNLRGMV
GTMTEVFVIVGVFLAQIFSLQAILGNPAGWPVLLALTGVPALLQLLTLPFFPESPRYSLI
QKGDEATARQALRRLRGHTDMEAELEDMRAEARAERAEGHLSVLHLCALRSLRWQLLSII
VLMAGQQLSGINAINYYADTIYTSAGVEAAHSQYVTVGSGVVNIVMTITSAVLVERLGRR
HLLLAGYGICGSACLVLTVVLLFQNRVPELSYLGIICVFAYIAGHSIGPSPVPSVVRTEI
FLQSSRRAAFMVDGAVHWLTNFIIGFLFPSIQEAIGAYSFIIFAGICLLTAIYIYVVIPE
TKGKTFVEINRIFAKRNRVKLPEEKEETIDAGPPTASPAKETSF

>gi568815597r:8903303_9126345|GENSCAN_predicted_CDS_3|1575_bp
atggagaacaaagaggcgggaacccctccacccattccatccagggaggggcggctccag
ccgacgctgttgctggcgacactgagcgcggcctttggctcagccttccagtacggctac
aacctctctgtggtcaacacgccgcacaaggtgggcacaagctgtggatggggcaatgtt
ttccaggtcttcaagtcattttacaacgaaacctactttgagcgacacgcaacattcatg
gacgggaagctcatgctgcttctatggtcttgcaccgtctccatgtttcctctgggcggc
ctgttggggtcattgctcgtgggcctgctggttgatagctgcggcagaaaggggaccctg
ctgatcaacaacatctttgccatcatccccgccatcctgatgggagtcagcaaagtggcc
aaggcttttgagctgatcgtcttttcccgagtggtgctgggagtctgtgcaggcatctcc
tacagcgcccttcccatgtacctgggagaactggcccccaagaacctgagaggcatggtg
ggaacaatgaccgaggttttcgtcatcgttggagtcttcctagcacagatcttcagcctc
caggccatcttgggcaacccggcaggctggccggtgcttctggcgctcacaggggtgccc
gccctgctgcagctgctgaccctgcccttcttccccgaaagcccccgctactccctgatt
cagaaaggagatgaagccacagcgcgacaagctctgaggaggctgagaggccacacggac
atggaggccgagctggaggacatgcgtgcggaggcccgggccgagcgcgccgagggccac
ctgtctgtgctgcacctctgtgccctgcggtccctgcgctggcagctcctctccatcatc
gtgctcatggccggccagcagctgtcgggcatcaatgcgatcaactactatgcggacacc
atctacacatctgcgggcgtggaggccgctcactcccaatatgtaacggtgggctctggc
gtcgtcaacatagtgatgaccatcacctcggctgtccttgtggagcggctgggacggcgg
cacctcctgctggccggctacggcatctgcggctctgcctgcctggtgctgacggtggtg
ctcctattccagaacagggtccccgagctgtcctacctcggcatcatctgtgtctttgcc
tacatcgcgggacattccattgggcccagtcctgtcccctcggtggtgaggaccgagatc
ttcctgcagtcctcccggcgggcagctttcatggtggacggggcagtgcactggctcacc
aacttcatcataggcttcctgttcccatccatccaggaggccatcggtgcctacagtttc
atcatctttgccggaatctgcctcctcactgcgatttacatctacgtggttattccggag
accaagggcaaaacatttgtggagataaaccgcatttttgccaagagaaacagggtgaag
cttccagaggagaaagaagaaaccattgatgctgggcctcccacagcctctcctgccaag
gaaacttccttttag

>gi568815597r:8903303_9126345|GENSCAN_predicted_peptide_4|618_aa
MTASRHAPVPALGSLQGGSTGRALVTPWLCLRRPVTGRNRRLTLVLALATLIAAFGSSFQ
YGYNVAAVNSPALLMQQFYNETYYGRTGEFMEDFPLTLLWSVTVSMFPFGGFIGSLLVGP
LVNKFGRCAVSISGSHVWQVSQCLGMLELHSLTASSIMRVLIMRAPLREAPPEKFALLLS
GSPGKGALLFNNIFSIVPAILMGCSRVATSFELIIISRLLVGICAGVSSNVVPMYLGELA
PKNLRGALGVVPQLFITVGILVAQIFGLRNLLANVDGWPILLGLTGVPAALQLLLLPFFP
ESPRYLLIQKKDEAAAKKALQTLRGWDSVDREVAEIRQEDEAEKAAGFISVLKLFRMRSL
RWQLLSIIVLMGGQQLSGVNAIYYYADQIYLSAGVPEEHVQYVTAGTGAVNVVMTFCAVF
VVELLGRRLLLLLGFSICLIACCVLTAALALQLIAHVQLISQWLIEVALLGEEPGAILHP
PGQDTVSWMPYISIVCVISYVIGHALGPSPIPALLITEIFLQSSRPSAFMVGGSVHWLSN
FTVGLIFPFIQEGLGPYSFIVFAVICLLTTIYIFLIVPETKAKTFIEINQIFTKMNKVSE
VYPEKEELKELPPVTSEQ

>gi568815597r:8903303_9126345|GENSCAN_predicted_CDS_4|1857_bp
atgacggcctcccgccacgcccccgtccccgcgctcggctccctccagggcggaagcacg
ggtcgagcgttggtgacgccatggctgtgcttgcgacgccctgtcactggcaggaaccgg
aggctgacgcttgtgcttgccctggcaaccctgatagctgcctttgggtcatccttccag
tatgggtacaacgtggctgctgtcaactccccagcactgctcatgcaacaattttacaat
gagacttactatggtaggaccggtgaattcatggaagacttccccttgacgttgctgtgg
tctgtaaccgtgtccatgtttccatttggagggtttatcggatccctcctggtcggcccc
ttggtgaataaatttggcaggtgtgctgttagtataagcggctctcacgtgtggcaagtt
tctcagtgtttaggaatgctggagctccactcgctgacagcttcgtccatcatgagggtc
ctcatcatgagggctccattgcgagaggcccctccagagaagtttgctttgcttctgtca
ggatctccaggaaaaggggccttgctgttcaacaacatattttctatcgtgcctgcgatc
ttaatgggatgcagcagagtcgccacatcatttgagcttatcattatttccagacttttg
gtgggaatatgtgcaggtgtatcttccaacgtggtccccatgtacttaggggagctggcc
cctaaaaacctgcggggggctctcggggtggtgccccagctcttcatcactgttggcatc
cttgtggcccagatctttggtcttcggaatctccttgcaaacgtagatggctggccgatc
ctgctggggctgaccggggtccccgcggcgctgcagctccttctgctgcccttcttcccc
gagagccccaggtacctgctgattcagaagaaagacgaagcggccgccaagaaagcccta
cagacgctgcgcggctgggactctgtggacagggaggtggccgagatccggcaggaggat
gaggcagagaaggccgcgggcttcatctccgtgctgaagctgttccggatgcgctcgctg
cgctggcagctgctgtccatcatcgtcctcatgggcggccagcagctgtcgggcgtcaac
gctatctactactacgcggaccagatctacctgagcgccggcgtgccggaggagcacgtg
cagtacgtgacggccggcaccggggccgtgaacgtggtcatgaccttctgcgccgtgttc
gtggtggagctcctgggtcggaggctgctgctgctgctgggcttctccatctgcctcata
gcctgctgcgtgctcactgcagctctggcactgcagctcatagcccacgttcagctgatt
tcccagtggctcatcgaggtggcactgctgggggaggagccaggtgccatcctccaccca
ccagggcaggacacagtgtcctggatgccatacatcagcatcgtctgtgtcatctcctac
gtcataggacatgccctcgggcccagtcccatacccgcgctgctcatcactgagatcttc
ctgcagtcctctcggccatctgccttcatggtggggggcagtgtgcactggctctccaac
ttcaccgtgggcttgatcttcccgttcatccaggagggcctcggcccgtacagcttcatt
gtcttcgccgtgatctgcctcctcaccaccatctacatcttcttgattgtcccggagacc
aaggccaagacgttcatagagatcaaccagattttcaccaagatgaataaggtgtctgaa
gtgtacccggaaaaggaggaactgaaagagcttccacctgtcacttcggaacagtga

>gi568815597r:8903303_9126345|GENSCAN_predicted_peptide_5|240_aa
XWGVPLVITVAAVALKKIGYDASDVSVGWCWIDLEAKDHVLWMLLTGKLWEMLAYVLLPL
LYLLVRKHINRAHTALSEYRPILSQEHRLLRHSSMADKKLVLIPLIFIGLRVWSTVRFVL
TLCGSPAVQTPVLVVLHRRHSLIPSRSTVAAPQCRPRHSCREELGPTVLCLPLCLRQDLE
ERRQSGISVVRGDPQAASSTGTSVLAHGWAFICIRVAVRFGKPVAHSCGHSAPTQWTLMS

>gi568815597r:8903303_9126345|GENSCAN_predicted_CDS_5|723_bp
nnctggggggtcccgttggtcatcactgtggcagccgtcgccctgaagaagattggctat
gacgcctcggacgtgtctgtgggctggtgctggatcgacctggaggccaaggaccatgtc
ctgtggatgctgctgacggggaagctgtgggagatgctggcatatgtgctgctgcctctg
ctgtacctcctggtccggaagcacatcaacagagcgcacacggcactctctgagtaccgg
cccatcctctcccaggagcaccgcctgctgcgccactcctccatggcggacaagaagctg
gtgctcatcccgctcatcttcatcggcctcagggtctggagcaccgtgcggttcgtgctg
accctctgtggctccccggccgtgcagacgccggtgctggtggttctgcataggaggcac
agcctgattccttcccgcagcacagtggctgcaccccagtgtcggccaaggcacagctgc
agggaggagctcggccccactgtgctgtgccttcctctctgcctgagacaggaccttgaa
gagagaaggcagagtgggatcagtgtggtccggggtgatcctcaggcagcaagttccacc
ggtaccagcgtcctggcccacgggtgggcgttcatctgcataagggtagcagtgagattc
gggaagccggtggcccacagctgtggccacagtgcccccacccagtggaccttgatgtcc
tga