GENSCAN 1.0	Date run:  5-Nov-116	Time: 21:33:50

Sequence gi568815590f:102940837_103168744 : 227908 bp : 41.82% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +    703    866  164  2  2   73   43   133 0.696   4.42
 1.02 PlyA +   2784   2789    6                              -0.45

 2.04 PlyA -   3313   3308    6                               1.05
 2.03 Term -   4765   4536  230  2  2   35   48   190 0.903   5.51
 2.02 Intr -  12890  12776  115  2  1  116   96    65 0.924   9.20
 2.01 Init -  13683  13627   57  0  0   56   76     5 0.257  -2.54
 2.00 Prom -  13737  13698   40                              -5.65

 3.00 Prom +  19518  19557   40                              -6.85
 3.01 Init +  21074  21130   57  1  0   96   94    48 0.114   7.56
 3.02 Term +  36751  36918  168  0  0  100   44   148 0.218   8.50
 3.03 PlyA +  37019  37024    6                              -0.45

 4.00 Prom +  37033  37072   40                              -7.05
 4.01 Init +  37913  38119  207  1  0   38  121   112 0.763   8.37
 4.02 Intr +  50364  50529  166  2  1   78   53    86 0.198   2.71
 4.03 Intr +  52374  52572  199  1  1   51   56   131 0.107   3.69
 4.04 Intr +  55596  55616   21  0  0  112   80    36 0.225   0.94
 4.05 Intr +  59728  59858  131  1  2  108   64   -16 0.156  -2.58
 4.06 Intr +  61932  62170  239  1  2   51   65   115 0.128   1.91
 4.07 Intr +  62739  62857  119  2  2   44   70    89 0.120   1.04
 4.08 Intr +  71675  71892  218  2  2   40   87    64 0.061  -1.28
 4.09 Intr +  75977  76299  323  0  2   40   39   184 0.361   3.35
 4.10 Term +  76362  76511  150  2  0  -28   42   194 0.588   0.13
 4.11 PlyA +  76894  76899    6                               1.05

 5.03 PlyA -  78096  78091    6                               1.05
 5.02 Term -  80576  80128  449  0  2  105   49   310 0.585  23.19
 5.01 Init -  96032  96026    7  2  1   84   90     5 0.247   1.17
 5.00 Prom -  98405  98366   40                              -5.55

 6.00 Prom +  98438  98477   40                              -8.65
 6.01 Init + 100001 100132  132  1  0   89   67   103 0.988   8.49
 6.02 Intr + 101504 101571   68  1  2   95   57    93 0.779   3.68
 6.03 Intr + 108034 108119   86  1  2   83   99    71 0.775   6.24
 6.04 Intr + 110214 110308   95  1  2   74  116    53 0.947   5.46
 6.05 Intr + 111895 111986   92  0  2   74   59   127 0.999   6.27
 6.06 Intr + 113048 113146   99  2  0   82  108   104 0.997  10.11
 6.07 Intr + 115032 115100   69  0  0   89  108    84 0.989   7.88
 6.08 Intr + 122119 122211   93  1  0   96   71    86 0.979   5.86
 6.09 Intr + 122299 122392   94  1  1   48   25   130 0.995   1.75
 6.10 Intr + 123878 123975   98  1  2   82   98    77 0.991   5.99
 6.11 Intr + 125485 125611  127  1  1   34   95    83 0.993   3.36
 6.12 Term + 127816 127911   96  0  0   92   48   109 0.971   4.29
 6.13 PlyA + 128424 128429    6                               1.05

 7.06 PlyA - 129221 129216    6                               1.05
 7.05 Term - 135466 135241  226  0  1   79   44   192 0.610   9.17
 7.04 Intr - 142748 142566  183  1  0   85  101    51 0.269   4.08
 7.03 Intr - 149936 149701  236  2  2   63   53   136 0.213   3.16
 7.02 Intr - 155854 155756   99  1  0   84   65    45 0.427   1.19
 7.01 Init - 161424 161272  153  0  0   89   31   103 0.089   4.73
 7.00 Prom - 168283 168244   40                              -3.95

 8.08 PlyA - 169581 169576    6                               1.05
 8.07 Term - 170189 170052  138  2  0   96   43   142 0.446   7.48
 8.06 Intr - 171235 171214   22  0  1  111   94     6 0.613   0.13
 8.05 Intr - 179429 179245  185  2  2   70   69   103 0.646   4.26
 8.04 Intr - 181834 181723  112  0  1   77   64    67 0.458   2.66
 8.03 Intr - 184192 184060  133  2  1   71   -6   120 0.406  -0.32
 8.02 Intr - 188830 188710  121  1  1   71  106   113 0.825  10.55
 8.01 Init - 189457 189395   63  1  0   92   39    82 0.884   4.90
 8.00 Prom - 197881 197842   40                              -4.45

 9.00 Prom + 198619 198658   40                              -4.55
 9.01 Init + 200062 200221  160  0  1   68  114   129 0.715  13.61
 9.02 Intr + 212309 212474  166  0  1   88   97    69 0.493   5.90
 9.03 Intr + 214526 214695  170  2  2   78   58    78 0.406   2.47
 9.04 Term + 214980 215203  224  1  2   82   42    96 0.197   0.50
 9.05 PlyA + 215325 215330    6                              -0.45

10.05 PlyA - 215529 215524    6                               1.05
10.04 Term - 215691 215561  131  1  2   48   41    94 0.569  -1.94
10.03 Intr - 215990 215846  145  2  1   23  115   115 0.509   6.63
10.02 Intr - 219872 219838   35  0  2   88  103    31 0.533   1.62
10.01 Init - 222555 222480   76  0  1   43  109    51 0.421   4.00

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 164414 164529  116  0  2   68   49   115 0.820   3.35


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590f:102940837_103168744|GENSCAN_predicted_peptide_1|54_aa
XAQEHVSGKLQVRPSQKTHTGAGGEAQRNSVGSSQQDQDSTGYTGLSITSHNRK

>gi568815590f:102940837_103168744|GENSCAN_predicted_CDS_1|165_bp
nctgcccaagaacatgtctctggaaagttgcaggtgcggccatcgcagaaaacacacaca
ggagctgggggagaggcacagagaaacagtgtaggatccagccaacaggaccaggacagc
actggctacactggcttatcgattacatcccacaatagaaagtaa

>gi568815590f:102940837_103168744|GENSCAN_predicted_peptide_2|133_aa
MNRGPEKRFLKRRHTNGQQDPILDLTFNHHVSSGSSVAVSQSFLIFDDLDNFEEFWSVHS
SRESVSAADTVMGSPRFPSSLKDLFSQLLSGLLADSPQLSALFSMASVKRVSLPKVTPPH
WSNLNPEAGQHRS

>gi568815590f:102940837_103168744|GENSCAN_predicted_CDS_2|402_bp
atgaacagaggacctgaaaagagatttctcaaaagaagacatacaaatggccaacaggat
cccatcctggatctcacatttaatcatcatgtgtcctcaggctcctctgtggcagtttct
cagtcttttcttatttttgatgaccttgacaattttgaggagttctggtcagtacattcc
agccgagagtcagtttcggcagcagacactgtgatgggctctccacggttcccttccagt
ctgaaggacttattctctcagctgttgagtgggctgctggcagacagccctcagctgtca
gccctcttcagcatggcctcagtgaagagggtctctttacctaaggttacaccccctcac
tggagcaatctgaatccagaggctggtcaacataggtcataa

>gi568815590f:102940837_103168744|GENSCAN_predicted_peptide_3|74_aa
MPPVSNTEAGDLRNCGTSKNQKSERRKKWVSPGERKRRIMVLCKELEAKKQAVFTYQPGL
SGIFASFQYGLKSI

>gi568815590f:102940837_103168744|GENSCAN_predicted_CDS_3|225_bp
atgccgccagtgtcaaatacagaagcaggagacctgagaaactgtggcacctccaagaat
cagaaatctgagcgtaggaagaagtgggttagccctggagaaaggaaaaggaggatcatg
gttctctgcaaagagctggaagctaaaaagcaggctgtgtttacttaccaaccaggactc
agtgggatctttgccagcttccaatatggccttaaaagtatatga

>gi568815590f:102940837_103168744|GENSCAN_predicted_peptide_4|590_aa
MRKEVWQKACCLRGSGPGRNFTLKQLWEIFHDAENTKDKMLGADPVLERRTIHHVREKML
SPCRKLHKKVPSQGLYLDLIWLIIKSNLILDPVCSNEVWRAQNIIHEAQSERKLITASSY
KQENNQESPSPWPVRNQAAQQEVSSRRTSKASSVLTAVPHRLHYHGSSVACQINSRIRFS
WDHEPYCELCMFLFSAEWWTRYGILTASKCHCDISMAQLVTIQPIFVGHPPHAPGSGLSP
LRLRVNIYTDFKYAFHILHHHAVIWAKRSFLTTQGSSIVNASSIKTLLKVALLPKKTRVI
HCKGHQKASDPIAQGSTYADKSQLYTITDQPLLVKSPKQFLRLLVFSGTFIPLTVLNLQE
RFHTISKDAMTKMMISISSRTDTMRTRGKELTGLTTQTTQYLFPSSSSVIKCLKSGLSFG
CEIYSATLTECLPEANKDYHFKVDNDENEHKLSLRMVSLGAGRKDGFYIVEAEVMNYEGS
PIKVILATLKRYVQSMVYLGGFEITLPVALHSVCFRAWAYEYTALNRYEGRYKAGHEEEG
DKKIKLLADENHDDDEEEEHFDEGKTEEKALVMKFIQDTPSKKCTKIKPK

>gi568815590f:102940837_103168744|GENSCAN_predicted_CDS_4|1773_bp
atgaggaaggaagtgtggcaaaaagcatgctgtctcagaggaagcggtcctggcagaaac
ttcacattgaagcaactctgggaaatttttcatgacgctgaaaacacaaaggataaaatg
ttgggagctgatccagtcttagaaaggagaacaattcatcacgtcagagaaaagatgctc
tctccatgtcgtaagttacacaagaaggtacctagccaaggactgtatctggatctgatc
tggttaatcatcaaatccaatttgatcctggaccctgtttgctcaaatgaagtctggaga
gctcaaaatataattcatgaagctcagtctgagaggaaattaatcacggcctccagttac
aaacaagagaacaatcaagaatccccaagtccatggcctgttaggaaccaggctgcacag
caggaggtgagcagcaggcgaacaagcaaagcttcatctgtacttacagctgttccccat
cgcttgcattaccatgggagttctgttgcctgtcagatcaacagccgcattagattctca
tgggaccatgaaccctattgtgaactgtgcatgtttctcttcagcgctgaatggtggaca
agatatggcattttgactgctagcaaatgtcactgtgacatttcaatggcacaattggtg
acaattcagccaatttttgttgggcaccctccacatgccccagggtctgggctcagccct
ttacgactacgcgtcaatatttatactgactttaaatatgccttccatatcctgcaccac
catgctgttatatgggcgaaaagaagtttcctcactacacaagggtcctccatcgttaat
gcctcttcaataaaaactcttctcaaggtcgctttacttccaaaaaaaactagagtcatt
cactgcaagggccatcaaaaggcatcagatcccattgctcagggcagcacttatgctgat
aagtcccagctgtatacaataacggaccagcctttattagtcaaatcacccaagcagttt
ctcaggctcttggtattcagtggaaccttcataccccttactgtcctcaatcttcaggaa
agatttcataccatttctaaggatgcaatgacaaaaatgatgatttctattagttcaagg
accgacactatgaggaccagaggaaaggaactgacaggtttaaccactcagacaacacag
tacctcttcccttcctcatcctctgtcataaaatgtttgaaatctggtctttcatttggt
tgtgaaatctattcagctacccttactgaatgcttaccagaggccaacaaagattatcac
tttaaggtggataatgatgaaaatgagcacaagttatctttaagaatggtcagtttaggg
gctggtagaaaggatggattttatattgttgaagcagaagtaatgaactatgaaggcagt
ccaattaaagtaatactagcaactttaaaaaggtatgtacagtcaatggtttatcttggg
ggctttgaaataacattgcctgtggccttacactcagtgtgtttcagggcctgggcatat
gagtacacagcacttaacaggtatgaaggaagatacaaagcaggacatgaagaggaggga
gataaaaaaataaaacttcttgctgatgaaaatcatgatgatgatgaagaggaagaacat
tttgatgaagggaaaactgaagaaaaagctctagtgatgaaatttatacaggatactcca
tccaaaaaatgcacaaagatcaaaccaaaataa

>gi568815590f:102940837_103168744|GENSCAN_predicted_peptide_5|151_aa
MAETEPRPKTVNWRRETRHSHPASSSSNATVSAPAPTRVPPRQRPELMLRPDQDSPSGES
HRSLTQEGVKRGSSSSNRYRGRQPSGRYRLSDPSLPDLSSGLTASSTQANTEQVTCQPSS
QLTAARAAPPTPAPLRSRSRCHCRALGEGRD

>gi568815590f:102940837_103168744|GENSCAN_predicted_CDS_5|456_bp
atggcagagacggaacctaggcccaagacggtgaattggcgccgagaaaccagacacagc
cacccagccagctccagctccaacgccacggtctctgcccccgcacccacccgcgtccct
cccaggcagcgaccggagctcatgcttcggcctgaccaggactccccatccggggagagc
catcgctcactgacccaggaaggtgtcaaacgaggaagtagcagcagtaacaggtaccga
ggcagacagcctagcggacgctatcggctcagcgatccatcccttcccgacctaagctcc
ggcctcacggcttcctctacccaagcgaacacagaacaagtcacgtgccagcccagcagt
cagctgaccgcggcgcgcgctgctccgcctacgcccgcgccactgcgcagccgcagccgc
tgccactgccgggccttgggagaggggcgggactag

>gi568815590f:102940837_103168744|GENSCAN_predicted_peptide_6|382_aa
MTEFWLISAPGEKTCQQTWEKLHAATSKNNNLAVTSKFNIPDLKVGTLDVLVGLSDELAK
LDAFVEGVVKKVAQYMADVLEDSKDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKN
ISEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSE
YLVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLSEDQDSYLCNVTLFRKAVDDFRHK
ARENKFIVRDFQYNEEEMKADKEEMNRLSTDKKKQFGPLVRWLKVNFSEAFIAWIHVKAL
RVFVESVLRYGLPVNFQAMLLQPNKKTLKKLREVLHELYKHLDSSAAAIIDAPMDIPGLN
LSQQEYYPYVYYKIDCNLLEFK

>gi568815590f:102940837_103168744|GENSCAN_predicted_CDS_6|1149_bp
atgactgagttctggcttatatctgctcctggggagaaaacctgtcagcaaacatgggag
aaattgcatgcggcaacttcaaagaacaataatcttgctgtcacttccaagttcaatatt
cctgacttaaaggttggcacgttggatgtcttggttggcttgtcagatgaactggctaaa
ctggatgcatttgtagaaggagtggttaagaaagtagctcaatacatggctgatgtattg
gaagatagcaaagacaaagttcaagagaatctgttggctaatggagtggacttggttact
tatataacaaggttccagtgggacatggccaaatatccaatcaagcagtccctgaaaaat
atttctgaaataattgccaagggagtaactcagattgataatgacctgaaatctcgagca
tctgcatacaataacctgaaaggaaatcttcagaatttggaacgaaagaatgcaggaagt
ttgctaactagaagtctagcagaaattgtgaagaaggatgactttgttcttgattcagag
tatctcgtcacattactggtagtagttcccaagttaaaccacaacgactggattaagcag
tatgaaacactagccgaaatggtagttccaaggtctagcaatgttctttcagaggaccaa
gacagttacctgtgtaatgtcaccttgtttaggaaggcagttgatgacttcagacacaaa
gccagagaaaacaaattcattgttcgtgacttccagtataatgaagaggagatgaaagca
gataaagaagaaatgaacaggctttctactgataagaaaaaacaatttggaccacttgta
cggtggctgaaagtgaattttagtgaagcatttattgcatggattcacgtgaaagcatta
cgggttttcgttgagtctgttttaaggtatggcttgccagtgaacttccaagcaatgcta
cttcagcccaataagaaaactttgaagaaactgagagaagtattacatgaattgtataaa
catctagacagcagtgcagcagctattattgatgctcctatggatattccaggtttaaac
ctgagtcaacaagaatactacccctatgtgtactacaagattgattgcaacttgctggaa
ttcaagtga

>gi568815590f:102940837_103168744|GENSCAN_predicted_peptide_7|298_aa
MDQRREQQDFLLNLFLHKRRTKITHSHIRIDNRDAISTHSKEKGLQKPTEVCLIIQDNVH
YNYTKEQIQSCLATSQSQAESGLSLLHKQALQMSDMLMGSQEAIQVVVESSTTDNSRYFL
GSSWLPSTTMKVSQIVKIINITVIDEIYKPINEMELHVLYASGWVCVNYKLEFIEAFEEG
NGRSMCASQPYSIKLSILNLLLNPPLACSFIRLIMGWVYFNQTIGRNDSDPGMLVCPRFY
ILREHRCEVGSCGLLGGGRKGEETAGASLGTIYGLNSSSKAAPIKSTTVNDILLSENT

>gi568815590f:102940837_103168744|GENSCAN_predicted_CDS_7|897_bp
atggaccaacgtagagagcagcaggatttcctgctaaatctgttcctccacaagagaaga
acaaaaattacccacagccacatccgcatagataacagagatgccatatcaacacacagc
aaggagaaggggctacagaagccaaccgaagtgtgtttgattattcaggataatgtacac
tacaactacacgaaagaacagattcagtcttgtttagccacctcgcaaagtcaagcagaa
agtggtttgtctctcttgcataagcaggctcttcaaatgtctgatatgctaatgggcagc
caggaggccattcaagttgtagttgaaagttccactactgataattctcggtactttctt
ggcagttcttggcttccttccactaccatgaaagtctctcagattgtgaagattattaat
attactgtcattgatgaaatatataagcctatcaatgagatggaattgcatgttttatat
gcatcaggatgggtctgtgttaattataaacttgagtttattgaagcatttgaggaaggt
aatgggcggtctatgtgtgcttcacaaccttattcaattaagctctctattcttaattta
ctactaaatcctcctttggcctgtagtttcataaggcttatcatgggttgggtgtacttt
aatcagacaataggaaggaatgattcagaccctgggatgctagtctgcccacgattttac
atcctgagagagcacagatgtgaagttggctcatgtggcctgcttggaggaggtaggaaa
ggagaggagactgctggagcatccctaggaaccatctatggtctaaattcctcctccaaa
gcggcccccatcaaatcaacaacagtaaacgatattcttctttcagagaacacatag

>gi568815590f:102940837_103168744|GENSCAN_predicted_peptide_8|257_aa
MNITGEFGKSGSGGVASQPEQSTRRKDSLGKPTNPEKTPNDTSGLPKEIVKPDCPTVKLI
VEQSTTLDCPVHEPWRHHYAGMKCWSHFSDYNAQNTVIEDNGKWAPRGELLAGRLVSWSA
PLGTGPIPIPTRCSQGGEVKWDNKIQPRRMRANRKFIGIGGTLLQQLQPHPSPPCPRSKF
SRKAGLSHRFCALPEEIPQIVNPQSLFLCSRPVSTSVSAFPLPGPSQSSTPDQIARAGSA
ELHGQAQLETNHAGCQP

>gi568815590f:102940837_103168744|GENSCAN_predicted_CDS_8|774_bp
atgaacatcactggtgaatttggtaaaagtggcagtggaggggtagcttcacagccagag
caaagcacacgtaggaaagattctcttggaaaaccaaccaatccagagaaaacacctaac
gatacatcagggctgcccaaggaaatagtcaagccagattgccctactgtgaagctcata
gtggagcagagcacgaccctagactgtccagtccacgagccctggaggcatcactatgcg
ggaatgaaatgttggtcacacttcagtgactacaatgcacaaaatactgtgattgaagat
aatgggaaatgggcaccacgtggggagctgctggctggtcggctggtcagctggtcagct
cccctgggaacagggcccatcccaattcccaccaggtgtagccagggtggtgaagtcaag
tgggacaacaaaattcagcccagacggatgagagccaacaggaaatttataggcattgga
ggcacgctgctgcagcagctccagcctcacccatccccaccctgtcccaggtccaagttc
agcaggaaagcaggattgtctcataggttttgtgccctgcctgaggaaattccccagatt
gtgaatccccaaagcctcttcttgtgtagtcgcccggtctcaacctctgtctctgctttc
cctctccctgggccatctcaaagctcaacaccagaccaaatagctagagcaggatcagct
gaacttcacggccaagcacagctagaaacgaaccatgctggctgtcagccatag

>gi568815590f:102940837_103168744|GENSCAN_predicted_peptide_9|239_aa
MGCGGSRADAIEPRYYESWTRETESTWLTYTDSDAPPSAAAPDSGPEAGGLHSGNFQATL
KVSGSSWQRKNGENRYWAGCQQSGHFFHPIAVVREERRFPGTRRGKGIRVRGTVQGRGRS
GMAVVIGASADALGSSGAGMAIQQLRRLGLFTLYRPGAGCSLPLASQWRVKFRGSGVDLR
FCMFDRLPSDADAAGPEVLDQRLANFFCKGTEGKYFRLCGPRDFFCNYSTSLFLMPKQL

>gi568815590f:102940837_103168744|GENSCAN_predicted_CDS_9|720_bp
atgggctgcggcgggagccgggcggatgccatcgagccccgctactacgagagctggacc
cgggagacagaatccacctggctcacctacaccgactcggacgcgccgcccagcgccgcc
gccccggacagcggccccgaagcgggcggcctgcactcggggaactttcaagctacccta
aaagtatcagggtcctcttggcaaaggaaaaatggggagaacagatactgggcaggctgc
cagcagagtggtcacttctttcatcctatagctgtggtcagagaggagagaagatttcca
ggaacaagaagggggaaaggaattagggtgaggggcacagtccagggcagagggaggagt
ggaatggctgttgtaataggggcttcagctgatgccctggggagctctggagctgggatg
gccattcagcaattgagaagactgggcctttttaccctgtatcggccaggcgctggatgc
agtcttcccctagcaagtcagtggagagtgaaatttcgtgggtctggggtggacctgaga
ttctgcatgtttgacaggcttccaagtgatgctgatgctgctggtccagaggtcctagat
cagaggttagcaaactttttctgtaaagggacagagggtaaatatttcaggctttgtggg
ccacgtgatttcttttgcaactactcaacttctctgtttttaatgccaaagcagctatag

>gi568815590f:102940837_103168744|GENSCAN_predicted_peptide_10|128_aa
MVGNVVWNQEQIWRGAATGRITSAAACRQPIVGPCDHEHLIQKSKHHNSNPFISCPDSQP
SRHAATFQKPSFLALQPVAITELRKVTCAEGIKASQHSSEPKARRIPYEDEIDLQAPSTL
LCVMPYSS

>gi568815590f:102940837_103168744|GENSCAN_predicted_CDS_10|387_bp
atggttggaaatgtggtctggaatcaagagcagatatggcggggagcagccactgggagg
ataacgtcagcagcagcttgcagacagcctattgtgggaccttgtgatcatgaacacctg
attcagaaaagtaaacaccataacagcaacccattcatcagctgcccagactcacaacca
agcagacatgcagcgactttccaaaaaccctcatttctggcattacagcctgtggcaata
acagagttaaggaaagtgacctgtgctgaagggattaaggcatcccaacattcctcagag
cccaaggcaaggagaatcccttatgaagatgaaattgatcttcaagcaccctctacctta
ctctgcgtgatgccatattcttcctga