GENSCAN 1.0	Date run:  4-Nov-116	Time: 09:28:05

Sequence gi568815589f:105199218_105485503 : 286286 bp : 39.29% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -    372    367    6                               1.05
 1.02 Term -   8866   8784   83  2  2   84   49    66 0.076  -0.82
 1.01 Init -  25176  25077  100  0  1   77   70    79 0.581   5.47
 1.00 Prom -  33417  33378   40                              -4.65

 2.00 Prom +  38467  38506   40                              -4.65
 2.01 Init +  45722  45909  188  1  2   57   11   257 0.782  11.48
 2.02 Intr +  86994  87096  103  0  1   92   48    60 0.024   1.66
 2.03 Intr + 100003 100092   90  0  0   70   91   100 0.618   7.77
 2.04 Intr + 110507 110649  143  1  2   93   81    73 0.154   5.33
 2.05 Intr + 136346 136482  137  2  2   81   81    85 0.125   6.39
 2.06 Intr + 149141 149234   94  0  1  107   84    -9 0.076  -1.30
 2.07 Intr + 156995 157164  170  2  2   89   59    55 0.269   1.37
 2.08 Intr + 161974 162113  140  2  2   84   79    89 0.989   6.86
 2.09 Intr + 163604 163790  187  1  1  111  111    23 0.996   5.24
 2.10 Intr + 165338 165503  166  0  1   76   82    90 0.991   5.30
 2.11 Intr + 166266 166422  157  0  1   66  116    42 0.963   3.89
 2.12 Intr + 175381 175518  138  0  0   72   93    98 0.883   8.44
 2.13 Intr + 183906 184142  237  2  0  116  115    93 0.937  11.69
 2.14 Intr + 186205 186486  282  0  0   55   80   145 0.834   7.09
 2.15 Term + 189345 189503  159  2  0   54   49    90 0.540  -1.34
 2.16 PlyA + 190706 190711    6                               1.05

 3.04 PlyA - 190812 190807    6                               1.05
 3.03 Term - 197277 197224   54  0  0   84   39    37 0.053  -5.02
 3.02 Intr - 199650 199543  108  0  0   67   69    88 0.231   4.36
 3.01 Init - 214199 214077  123  2  0   78  113    81 0.597   9.82
 3.00 Prom - 222900 222861   40                              -5.05

 4.00 Prom + 226932 226971   40                              -4.85
 4.01 Init + 240193 240255   63  0  0   18   78    95 0.505   1.75
 4.02 Intr + 242999 243073   75  1  0   63   92    67 0.326   3.39
 4.03 Intr + 244049 244156  108  1  0   33   52   115 0.500   1.96
 4.04 Intr + 246406 246442   37  0  1   60  105    44 0.657   0.22
 4.05 Term + 248415 248842  428  1  2   68   42   178 0.569   5.68
 4.06 PlyA + 252394 252399    6                               1.05

 5.00 Prom + 256025 256064   40                              -4.85
 5.01 Init + 258602 259075  474  1  0   61   85   230 0.623  15.52
 5.02 Intr + 265019 265114   96  1  0   72   80    50 0.773   1.89
 5.03 Intr + 268976 269107  132  1  0   84   94   145 0.999  14.62
 5.04 Intr + 271884 272054  171  2  0   62   50    80 0.637   0.82
 5.05 Intr + 272687 272788  102  1  0  124   81    74 0.999   9.75
 5.06 Term + 279666 279782  117  2  0   52   49   126 0.986   2.66
 5.07 PlyA + 279859 279864    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 223736 223620  117  2  0   90   43   124 0.822   5.66


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589f:105199218_105485503|GENSCAN_predicted_peptide_1|60_aa
MAQMSDVMDKVFKAGIISMFKELKKTMLNEVKKGNAKSEPCWLVIGSDGKQLSSREGSAG

>gi568815589f:105199218_105485503|GENSCAN_predicted_CDS_1|183_bp
atggcccagatgtcagatgtgatggacaaagtgttcaaagcaggcattataagtatgttc
aaagaactaaagaaaaccatgcttaatgaagtaaagaaagggaatgccaagtctgagccc
tgctggcttgttattggttcagatggcaaacagctatcaagcagggaagggtctgctgga
tag

>gi568815589f:105199218_105485503|GENSCAN_predicted_peptide_2|796_aa
MPPVRRVARRAPAARYLSLSPASPERTVQSKDPHSAFPSAGSRRCPCAGSAAADSKAPLR
GAYSFHSVYTGYANHSKQSAAKCHGSWPNCLVHIPAVSSKREWKPLEDRSCTDIPWLLLF
ILFCIGMGFICGFSIATGAAARLVSGYDSYGNICGQKNTKLEAIPNSGMDHTQRKYVFFL
DPCNLDLINRKIKSVALCVAACPRQELKTLSDVQKFAEINGSALCSYNLKPSEYTTSPKS
SVLCPKLPVPASAPIPFFHRCAPVNISCYAKFAEALITFVSDNSVLHRLISGVMTSKEII
LGLCLLSLGGTGVLWWLYAKQRRSPKETVTPEQLQIAEDNLRALLIYAISATVFTVILFL
IMLVMRKRVALTIALFHVAGKVFIHLPLLVFQPFWTFFALVLFWVYWIMTLLFLGTTGSP
VQNEQGFVEFKISGPLQYMWWYHVVGLIWISEFILACQQMTVAGAVVTYYFTRDKRNLPF
TPILASVNRLIRYHLGTVAKGSFIITLVKIPRMILMYIHSQLKGKNAYTATAINSTNFCT
SAKDAFVILVENALRVATINTVGDFMLFLGKVLIVCSTGLAGIMLLNYQQDYTVWVLPLI
IVCLFAFLVAHCFLSIYEMVVDVLFLCFAIDTKYNDGSPGREFYMDKVLMEFVENSRKAM
KEAGKGGVADSRELKPMVGGDEEVAALQEFHFHFLSLSVFTDCTSSGEAFVICITQDMLL
FLFVCLPITWMAEFLSQLRPPSIKQIIELNMRTSGFVLELFPERGSLVKETLKIYEFFYD
SLKVILEKCTKSDEEV

>gi568815589f:105199218_105485503|GENSCAN_predicted_CDS_2|2391_bp
atgcctcccgtgcgccgcgtcgcgcggcgggcgcccgccgcccgatacctctcgctgtcc
ccagcctcccctgagcgcaccgtgcagtccaaagacccccactccgcctttccgtccgcc
gggtcccgccgatgcccgtgcgctggctccgcggctgccgactcaaaggcgcctctgcgc
ggcgcctattcattccacagtgtctacacaggatatgctaaccacagtaaacagagcgca
gcaaagtgtcatgggtcctggcccaactgtctggttcacattcctgctgtaagctccaaa
cgagaatggaagccgctggaggaccgtagctgcacagacataccatggctgctgctcttc
atcctcttctgcattgggatgggatttatttgtggcttttcaatagcaacaggtgcagca
gcaagactagtgtcaggatacgacagctatggaaatatctgtgggcagaaaaatacaaag
ttggaagcaataccaaacagtggcatggaccacacccagcggaagtatgtattctttttg
gatccatgcaacctggacttgataaaccggaagattaagtctgtagcactgtgtgtagca
gcgtgtccaaggcaagaactgaaaactctgagtgatgttcagaagtttgcagagataaat
ggttcagccctatgtagctacaacctaaagccttctgaatacactacatctccaaaatct
tctgttctctgccccaaactaccagttccagcgagtgcacctattccattcttccatcgc
tgtgctcctgtgaacatttcctgctatgccaagtttgcagaggccctgatcacctttgtc
agtgacaatagtgtcttacacaggctgattagtggagtaatgaccagcaaagaaattata
ttgggactttgcttgttatcactaggaggcacaggtgtactatggtggctgtatgcaaag
caaagaaggtctcccaaagaaactgttactcctgagcagcttcagatagctgaagacaat
cttcgggccctcctcatttatgccatttcagctacagtgttcacagtgatcttattcctg
ataatgttggttatgcgcaaacgtgttgctcttaccatcgccttgttccacgtagctggc
aaggtcttcattcacttgccactgctagtcttccaacccttctggactttctttgctctt
gtcttgttttgggtgtactggatcatgacacttctttttcttggcactaccggcagtcct
gttcagaatgagcaaggctttgtggagttcaaaatttctgggcctctgcagtacatgtgg
tggtaccatgtggtgggcctgatttggatcagtgaatttattctagcatgtcagcagatg
acagtggcaggagctgtggtaacatactattttactagggataaaaggaatttgccattt
acacctattttggcatcagtaaatcgccttattcgttaccacctaggtacggtggcaaaa
ggatctttcattatcacattagtcaaaattccgcgaatgatccttatgtatattcacagt
cagctcaaaggaaagaatgcatacacagccacagctatcaacagcaccaacttctgcacc
tcagcaaaggatgcctttgtcattctggtggagaatgctttgcgagtggctaccatcaac
acagtaggagattttatgttattccttggcaaggtgctgatagtctgcagcacaggttta
gctgggattatgctgctcaactaccagcaggactacacagtatgggtgctgcctctgatc
atcgtctgcctctttgctttcctagtcgctcattgcttcctgtctatttatgaaatggta
gtggatgtattattcttgtgttttgccattgatacaaaatacaatgatgggagccctggc
agagaattctatatggataaagtgctgatggagtttgtggaaaacagtaggaaagcaatg
aaagaagctggtaagggaggcgtcgctgattccagagagctaaagccgatggtaggtgga
gatgaggaggtggccgccctccaagaatttcactttcacttcctctctctctctgtcttc
actgactgcacttcttcaggagaagcttttgttatctgtatcacgcaggacatgctgctc
tttctgtttgtgtgcttacccatcacttggatggcagaattcttgtcacaactgagacca
ccttctataaaacagatcattgaactaaacatgagaacttccggttttgttcttgaactt
ttccctgagagaggctcgctagttaaggaaactttaaagatttatgaatttttttatgat
tctctgaaagtgattttggaaaaatgtaccaaaagtgatgaagaggtttag

>gi568815589f:105199218_105485503|GENSCAN_predicted_peptide_3|94_aa
MGGTYIGKAKFSWKLPVFFSLYLIGQNYVIRPLQASGKYGKCGPGKPKDWTPLVEAETHW
VSSTASDQRYEAKEPLEELYSKLKEFRKAVPASK

>gi568815589f:105199218_105485503|GENSCAN_predicted_CDS_3|285_bp
atgggcggcacctatattgggaaggcgaaattttcttggaaattgccagtattcttcagc
ttatatctcattgggcagaactatgtcatacgaccacttcaagcttcagggaagtatgga
aagtgtggcccaggaaagccaaaagattggacacccctggtagaggcagaaactcactgg
gttagttccacagcatctgatcaaagatatgaggccaaagagcctctcgaggagctctat
tctaaactcaaggagttcagaaaggctgtgccagccagtaagtaa

>gi568815589f:105199218_105485503|GENSCAN_predicted_peptide_4|236_aa
MVVVVVVVVVVVVVVVVMEWEEEVGLLAMDHMGVTVGRGDSESLPNRPHNHGRRRKAHPT
LAADERQLSSAGKLIFIKPSALWQAGAEPGSTQSGLFPRFRYIPTPALFLPLDRWVRSSL
AAPRRIVWGGASDACWVEGGLIRLQHQILFPSRALRTGRLLDAQWPISGPERPLSLEEKG
WGKGVQPAEALAVDRRAALPTLHGYFPGAVSRCAQARCAPQPLPSAGRPFTLATAA

>gi568815589f:105199218_105485503|GENSCAN_predicted_CDS_4|711_bp
atggtggtggtggtggtggtggtggtggtggtggtggtggtggtggtggtgatggagtgg
gaggaagaagtggggcttcttgcaatggaccacatgggagtgacggtggggagaggagat
tcagagagccttccaaacaggcctcacaatcatggccgaaggcgaaaggcacatcctaca
ttggcagcagatgaaagacagctttcatctgcagggaaactcattttcataaaaccatca
gctctctggcaagcaggggcagagccaggaagcacgcagtctggtcttttcccacgtttt
cgctacatccccaccccagcccttttcctccctttggaccgctgggtccgctcaagcctg
gctgcccctcgaaggatagtgtggggaggggcttcagatgcgtgctgggtggagggtggg
ctaatccgtctccagcaccagatactctttccttcccgggccctccgcaccggccggctg
ctggatgcccagtggcctatttcagggccggagagaccgctatcgctggaggaaaaagga
tgggggaagggagtgcagcctgcagaggcactagcggtagacagacgggcggcgctcccc
accctccacggctacttcccgggagcagtcagccgctgcgcgcaggcgcggtgcgctcct
cagcccctcccttctgcgggccgccctttcaccctggcaaccgcggcgtga

>gi568815589f:105199218_105485503|GENSCAN_predicted_peptide_5|363_aa
MLAAVAIRAAPGTGTVTGSMRGCSWTKHTASGFLCGCLRLDEVNTVVPENSEMPVTAEPQ
GVGGRGATPLLFLPPAAWPVGVAGHVSACSVLPPCLGPWLPGWPNPVVTCCHVGQPPDAG
GSWEGYSVTALAQGIPRSRPLEVLLLFTPAVHVTVCSLEALQRIISTLANKNDEIQNFID
TLHHTLKGVQENSSNILSELDEEFDSLYSILDEVKESMINCIKQEQARKSQELQLILHIK
PATKVAMGHVFSLAFPSSHQVPKSLLHIECALCILINPLAIPGMSDVPVQLSQISQCNNA
LENSEELLEFATRSLDIKEPEEFSKRHIEKTWNNDYEVVKEISEEKLESKFDMYKKTMKE
VVP

>gi568815589f:105199218_105485503|GENSCAN_predicted_CDS_5|1092_bp
atgctggctgctgtggccatacgggcagctccgggcactggcacagtcactggctccatg
cgaggctgcagctggaccaagcatactgcaagtggcttcctctgtgggtgcctgcgtctg
gatgaagtgaacacagtggtgcctgaaaactcagagatgccagtaactgcagagccccaa
ggggtcgggggcaggggtgctacacctctcttgttcctgccacctgcagcttggccagtg
ggagtggcagggcatgtttcagcctgttcagtcctgccaccttgcttgggcccgtggctc
ccaggctggcccaatcccgttgtcacttgctgtcatgtggggcagccgcctgatgctggt
ggaagttgggagggctatagtgttacagctctggctcagggaatcccgaggtctaggccc
ttagaagtgttgctactcttcactcctgcagttcatgtcactgtctgcagcttggaagct
ctacagaggatcatttcaactctggcaaataaaaatgatgaaattcagaactttattgat
acactacatcatacactaaaaggagttcaggaaaattcgtccaacatactctcagagtta
gatgaagaatttgatagtttatactctatactggatgaagtaaaagaaagtatgattaac
tgtatcaagcaggaacaagctcgtaaatcccaagagttacagctcatactgcatattaaa
cctgccaccaaagtggccatgggtcatgtcttttctcttgcctttccttcttcccatcaa
gtaccaaaaagtcttttgcatattgagtgtgcattatgcatcttgatcaaccccctagcc
atccctggcatgagtgatgttccagtgcaactgagtcagattagtcaatgtaataatgcc
ctggagaactctgaagaactattagaatttgcaacaaggtcattagatataaaggaacct
gaagaattttcaaagaggcatatagagaaaacttggaacaacgattatgaagtagtgaaa
gagatctctgaagaaaaattagagagtaaatttgacatgtacaagaaaaccatgaaggaa
gttgtcccatga