GENSCAN 1.0	Date run:  4-Nov-116	Time: 09:49:36

Sequence gi568815584r:34416313_34639628 : 223316 bp : 44.82% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   8777   8816   40                              -2.46
 1.01 Sngl +  16112  16447  336  1  0   56   38   232 0.883  11.03
 1.02 PlyA +  16486  16491    6                               1.05

 2.06 PlyA -  16635  16630    6                               1.05
 2.05 Term -  45432  45371   62  1  2   69   42    70 0.469  -1.53
 2.04 Intr -  46424  46404   21  0  0   75  116    18 0.211   0.82
 2.03 Intr -  46762  46678   85  1  1   89  111    19 0.372   3.69
 2.02 Intr -  53182  53093   90  1  0   95  115    54 0.961   8.99
 2.01 Init -  54174  54112   63  0  0   82  102    12 0.944   1.38
 2.00 Prom -  58105  58066   40                              -3.46

 3.00 Prom +  60983  61022   40                              -6.06
 3.01 Sngl +  69667  70140  474  0  0   91   47   491 0.997  41.41
 3.02 PlyA +  72388  72393    6                               1.05

 4.22 PlyA -  74369  74364    6                               1.05
 4.21 Term - 100274  99998  277  1  1   90   41   141 0.325   4.53
 4.20 Intr - 113163 113046  118  1  1    5   78    94 0.447  -0.38
 4.19 Intr - 117227 117132   96  0  0   45  111    82 0.900   6.18
 4.18 Intr - 119963 119782  182  1  2   21   57   175 0.944   7.21
 4.17 Intr - 123332 123243   90  1  0    7   80   206 0.028  10.81
 4.16 Intr - 125275 125104  172  2  1   23   29   136 0.006   0.20
 4.15 Intr - 130570 130410  161  0  2   64  111    44 0.027   3.93
 4.14 Intr - 140454 140302  153  2  0  127    9    64 0.016   1.59
 4.13 Intr - 141276 141092  185  0  2   32   14   163 0.089   1.89
 4.12 Intr - 148183 148052  132  1  0   59   52   108 0.341   5.14
 4.11 Intr - 151459 151374   86  2  2   98   67    28 0.231   1.24
 4.10 Intr - 151701 151542  160  0  1   57   79    54 0.147   0.96
 4.09 Intr - 152837 152404  434  0  2   67   38   385 0.001  24.77
 4.08 Intr - 176838 176733  106  0  1   75   69    75 0.930   4.09
 4.07 Intr - 181333 181238   96  1  0   62  116    27 0.858   3.11
 4.06 Intr - 187159 187036  124  0  1   62   76    60 0.980   2.79
 4.05 Intr - 189405 189284  122  0  2   75   94   107 0.996   9.29
 4.04 Intr - 191828 191718  111  2  0   64   97    75 0.989   6.58
 4.03 Intr - 193430 193326  105  2  0   70   94    83 0.982   7.51
 4.02 Intr - 213642 213595   48  0  0   58   83   118 0.803   7.18
 4.01 Init - 213840 213799   42  0  0   64   64    83 0.580   2.02

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 123316 123243   74  1  2  110   80   161 0.965  18.04
S.002 Intr - 159530 159444   87  2  0  123   86    60 0.871   9.47


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584r:34416313_34639628|GENSCAN_predicted_peptide_1|111_aa
MAYTPGEGAMNIVEITMKDLGYFINLVDKAAAGFERIASNFGGSSIVGKRLSNSLHATEK
SFMNEELINAANFIVVLFLKIAIATPTFRNHDPDQSAAINIKARPSTNKKL

>gi568815584r:34416313_34639628|GENSCAN_predicted_CDS_1|336_bp
atggcatatacacctggtgaaggtgctatgaacattgttgaaattacaatgaaggactta
ggatattttataaacttagttgataaagcagcagcagggtttgaaaggattgcttccaat
tttggaggaagttccattgtgggtaaaaggctatcaaatagcttacatgctacagagaaa
tctttcatgaatgaagagttgatcaatgcagcaaactttattgttgtcttatttttaaaa
attgccatagccaccccaaccttccgcaaccatgacccagatcagtcagcagccatcaac
atcaaggcaagaccctccaccaacaaaaaattatga

>gi568815584r:34416313_34639628|GENSCAN_predicted_peptide_2|106_aa
MNSSRAGSVLPALSLPQPLAKVGNTFSIEIFLDLKVRDDPRLINRDSQRQQNPLDQRASG
LDPLGGYLQPLRGGQIDVFARPPAAQGGGDHVTVEHIAPGLDAFDL

>gi568815584r:34416313_34639628|GENSCAN_predicted_CDS_2|321_bp
atgaactcctcaagggctggctctgtgctacctgccctatcactcccacagcccctggca
aaggttggaaatacttttagtatagaaattttcttggatctgaaagtacgagatgatcca
cggttaataaacagggatagccagcggcagcagaacccactagatcagcgcgcttctggc
cttgacccacttggtggttacctacagccactaagaggtgggcagatagatgtttttgct
aggccgccagctgcacaaggaggcggggatcatgtaacagtggagcacatcgctcccggc
ttggacgcctttgacctttaa

>gi568815584r:34416313_34639628|GENSCAN_predicted_peptide_3|157_aa
MALKAKKEALAPPKAEAKAKALKAKKAVMKDVHIHKKRRPARHPPSRGPGHCDSRPPKYP
RKSAPRRNKLDRYAIIKFLWTTESAMKKIEDNTTYVFRVDVKANKQQIKQAVKKLPDNDA
AKVNTLIRPDGEKKAYVQLAPDYDVLDVAKKKWDHLN

>gi568815584r:34416313_34639628|GENSCAN_predicted_CDS_3|474_bp
atggcgttgaaagcaaagaaggaagcgcttgcccctcctaaagccgaagccaaagcgaag
gctttaaaggccaagaaggcagtgatgaaagatgtccacatccacaaaaaaagaagaccc
gcacgtcacccaccttccagaggcccaggacactgcgactcgaggccacccaaatatcct
cggaagagcgcccccaggagaaacaagcttgaccgttatgccatcatcaagtttctgtgg
accactgagtccgccatgaagaagatagaagacaacaccacatatgtgttcagggtggat
gttaaagccaacaagcagcagatcaaacaggctgtgaagaagctccctgacaatgatgcg
gccaaggtcaacaccctgattcggcccgatggagagaagaaggcatatgttcaactggct
ccagattacgatgttttggatgttgccaaaaaaaaatgggatcatctaaactga

>gi568815584r:34416313_34639628|GENSCAN_predicted_peptide_4|999_aa
MRACAGPRLGAAMMEGLDDGPDFLSEEDRGLKAINVDLQSDAALQVDISDALSERDKVKF
TVHTKSSLPNFKQNEFSVVRQHEEFIWLHDSFVENEDYAGYIIPPAPPRPDFDASREKLQ
KLGEGEGSMTKEEFTKMKQELEAEYLAIFKKTVAMHEVFLCRVAAHPILRRDLNFHVFLE
YNQDLSVRGKNKKEKLEDFFKNMVKSADGVIVSGVKDVDDFFEHERTFLLEYHNRVKDAS
AKSDRMTRSHKMHRPGRMMPGVTVKDVNQQEFIRALAAFLRKSGKLKVPEWVDTVKLLAK
HKELAPYDENWLYTRAASTAWHLYLWGGAGVGSMTKIYGGCQRSGGMPGHFSRGSKNVAH
RVLQALEGLKMVEKDQDGGRKLTRQGQRDLDRIAGQDLLYRRSRSLVDYENANKALDKAR
AKNKDVLQAETSQQLCCQKFEKISESAKQELIDFKTRRVAAFRKNLVELAELELKHAKIS
DNCSINSSTQPEVILPPRGHFAISGDICGYHNWVFYGYYQYMPGQQERNSVSHKKKKKKK
KKKKKKKKKKKKNTIIIIVYLQIFPSVQKWFVVQRYTLNSTGARPPFQVPDSRPRAHLRP
TSPGDTQACPTPSVGPRSGSGRDRSAGDDPGKGVAKAGESANAVPHYHKLCSRVSHIWGN
RRGQHIRSAMDKPRPGKTTFVIMVSPLPEQQMKGLDLDPEARALGPAFIHWWTSHGLIFT
SEGYVKDKTHSASNGNSTVQTALGNMPLQATMNRLPDDYDPYAVEEPSDEEPALSSSEDE
VDVLLHGTPDQKRKLIRECLTGESESSSEDEFEKEMEAELNSTMKTMEDKLSSLGTGSSS
GNGKVATAPTRYYDDIYFDSDSEDEDRAVQVTKKKKKKQHKIPTNDELLYDPEKDNRDQA
WVDAQRRGHESYKTQYRAMFVMNCSINKEEVLRYKASENRKKRRVHKKMRSNREDAAEKA
ETDVEEIYHPVMCTECSTEVAVYDKDEVFHFFNVLASHS

>gi568815584r:34416313_34639628|GENSCAN_predicted_CDS_4|3000_bp
atgcgcgcctgcgccggccctcgcctcggagcagccatgatggaaggcctggacgacggc
ccggacttcctctcagaagaggaccgcggacttaaagcaataaatgtagatcttcaaagt
gatgctgctctgcaggtggacatttctgatgctcttagtgagcgggataaagtaaaattc
actgttcacacaaagagttcattgccaaattttaaacaaaacgagttttcagttgttcgg
caacatgaggaatttatctggcttcatgattcctttgttgaaaatgaagactatgcaggt
tatatcattccaccagcaccaccaagacctgattttgatgcttcaagggaaaaactacag
aagcttggtgaaggagaagggtcaatgacgaaggaagaattcacaaagatgaaacaggaa
ctggaagctgaatatttggcaatattcaagaagacagttgcgatgcatgaagtgttcctg
tgtcgtgtggcagcacatcctattttgagaagagatttaaatttccatgtcttcttggaa
tataatcaagatttgagtgtgcgaggaaaaaataaaaaagagaaacttgaagacttcttt
aaaaacatggttaaatcagcagatggagtaatcgtttcaggagtaaaggatgtagatgat
ttctttgagcacgaacgaacatttcttttggagtatcataaccgagttaaggatgcatct
gctaaatctgatagaatgacaagatcccacaaaatgcacaggccgggccgcatgatgcct
ggagttactgtaaaagatgtgaaccagcaggagttcatcagagctctggcagccttcctc
agaaagtctgggaagctgaaagtccccgaatgggtggacaccgtcaagctgctggccaag
cacaaagagcttgctccctacgatgagaactggttgtacacgcgagctgcttccacagcg
tggcacctgtacctctggggtggcgctggggttggctccatgaccaagatctatggggga
tgtcagagaagtggcggcatgcctggccactttagccgaggctccaagaatgtggcccac
cgggtcctccaagccctggaggggctaaaaatggtggaaaaggaccaagatgggggccgc
aaactgacacgtcagggacagagagatctggacagaatcgctggacaggatctcctgtat
cgaaggtctaggtcactagtggattatgaaaatgctaataaagcactggataaagcaaga
gcaaaaaataaagatgttctacaggccgaaacttcccaacaattatgttgtcagaaattt
gaaaaaatatctgagtctgcaaaacaagaacttatagattttaagacaagaagagttgct
gcattcagaaaaaatttagtggaactggcagagttagaactgaagcatgcaaagatttct
gataactgttctattaacagtagtactcaaccagaggtgattctgccccccagaggacat
tttgcaatatctggagacatttgtggttatcacaactgggtgttctatggttactaccag
tacatgcctggacaacaagagcgaaactccgtctcacataagaagaagaagaagaagaag
aagaagaagaagaagaagaagaagaagaagaagaagaatacaataataataatagtgtat
ttacagattttcccaagtgttcaaaaatggtttgttgtccagcgttatacacttaactcg
accggtgcacggcctccctttcaggtcccagactcccggccgcgcgcccacttgcgccca
accagccccggagacacccaggcctgtcccacgccgtcggtaggtccccggtccgggagc
gggagagaccggagcgccggggacgaccccggcaagggcgtggctaaggcaggggaaagc
gcgaacgcagtcccccactaccacaaattatgcagtcgagtttcccacatttggggaaat
cgcaggggtcagcacatccggagtgcaatggataagcctcgccctgggaaaaccaccttc
gtgatcatggtatctcccctgccagagcagcagatgaagggcctagacctggatccagaa
gctagggctctcggtccagcattcatccactggtggacatcacatgggcttatttttacc
agcgaaggttacgtgaaggacaaaacgcactcagccagcaacggaaactcaacagttcaa
acagcactggggaacatgccgctgcaggccaccatgaaccggcttccggatgactacgac
ccctacgcggttgaagagcctagcgacgaggagccggctttgagcagctctgaggatgaa
gtggatgtgcttttacatggaactcctgaccaaaaacgaaaactcatcagagaatgtctt
accggagaaagtgaatcatctagtgaagatgaatttgaaaaggagatggaagctgaatta
aattctaccatgaaaacaatggaggacaagttatcctctctgggaactggatcttcctca
ggaaatggaaaagttgcaacagctccgacaaggtactacgatgatatatattttgattct
gattccgaggatgaagacagagcagtacaggtgaccaagaaaaaaaagaagaaacaacac
aagattccaacaaatgacgaattactgtatgatcctgaaaaagataacagagatcaggcc
tgggttgatgcacagagaagggggcatgaatcatacaaaactcaatatagagcaatgttt
gtaatgaattgttctattaacaaagaggaggttctaagatataaagcctcagagaacagg
aagaaaaggcgggtccataagaagatgaggtctaaccgggaagatgctgccgagaaggca
gagacagatgtggaagaaatctatcacccagtcatgtgcactgaatgttccactgaagtg
gcagtctacgacaaggatgaagtctttcattttttcaatgttttagcaagccattcctaa