GENSCAN 1.0	Date run:  4-Nov-116	Time: 09:55:39

Sequence gi568815589r:83561790_83807679 : 245890 bp : 40.07% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.08 PlyA -    242    237    6                               1.05
 1.07 Term -   3869   3788   82  1  1   44   36   128 0.236  -0.61
 1.06 Intr -   4135   3989  147  0  0   97   42    63 0.308   1.03
 1.05 Intr -   5470   5053  418  2  1   39   43   228 0.329   5.56
 1.04 Intr -   9066   8946  121  0  1  114   78    36 0.238   4.35
 1.03 Intr -  23347  23246  102  1  0  117    1    98 0.136   3.45
 1.02 Intr -  23841  23764   78  0  0   86  105    60 0.787   6.33
 1.01 Init -  29044  28988   57  1  0  107    4    65 0.367   1.36
 1.00 Prom -  32751  32712   40                              -8.05

 2.00 Prom +  33263  33302   40                              -5.15
 2.01 Init +  35053  35091   39  0  0   64   72    81 0.773   4.34
 2.02 Intr +  37144  37313  170  0  2   68   79    90 0.802   3.92
 2.03 Term +  37383  37635  253  0  1   93   47   117 0.687   2.23
 2.04 PlyA +  38733  38738    6                               1.05

 3.00 Prom +  42700  42739   40                              -9.45
 3.01 Sngl +  44741  45043  303  1  0   35   38   274 0.883  12.68
 3.02 PlyA +  45166  45171    6                               1.05

 4.00 Prom +  51564  51603   40                              -3.65
 4.01 Init +  61383  61432   50  2  2   57   50   135 0.736   5.07
 4.02 Intr +  66392  66422   31  2  1   94   88    39 0.160   1.71
 4.03 Intr +  67084  67170   87  0  0   49   92   136 0.177   9.35
 4.04 Intr +  79759  79802   44  0  2   97  116    -7 0.950  -0.88
 4.05 Term +  81640  81991  352  1  1  103   48   279 0.980  18.37
 4.06 PlyA +  82314  82319    6                               1.05

 5.16 PlyA -  86814  86809    6                               1.05
 5.15 Term - 100150  99998  153  1  0   69   43   162 0.889   6.74
 5.14 Intr - 102254 102086  169  1  1   76   69   211 0.998  17.03
 5.13 Intr - 103356 103241  116  0  2  120   61    62 0.965   5.03
 5.12 Intr - 107538 107396  143  1  2   29  109    56 0.150   0.95
 5.11 Intr - 116172 115938  235  0  1   72   69   219 0.952  14.74
 5.10 Intr - 116810 116652  159  2  0   32   58   137 0.942   4.36
 5.09 Intr - 118248 117986  263  1  2  102   55   135 0.991   7.88
 5.08 Intr - 121277 121162  116  1  2   95   97    57 0.995   6.47
 5.07 Intr - 124366 124215  152  1  2   55   80    98 0.944   3.74
 5.06 Intr - 132125 132072   54  2  0   53   92    61 0.657   1.26
 5.05 Intr - 145047 145015   33  0  0  125   69    21 0.723   1.40
 5.04 Intr - 145892 145711  182  0  2   80   94   284 0.842  26.87
 5.03 Intr - 146335 146136  200  0  2   90   54   151 0.989   9.97
 5.02 Intr - 146719 146537  183  0  0   84   81    34 0.392   0.28
 5.01 Init - 147628 147612   17  1  2   67   95     1 0.607  -1.49
 5.00 Prom - 147855 147816   40                              -6.05

 6.00 Prom + 150144 150183   40                              -9.15
 6.01 Init + 150718 151057  340  0  1   55  111   487 0.174  45.17
 6.02 Term + 151478 151638  161  0  2   14   32   152 0.553  -0.68
 6.03 PlyA + 151677 151682    6                               1.05

 7.14 PlyA - 151862 151857    6                               1.05
 7.13 Term - 177955 177908   48  1  0  128   38    32 0.814  -1.47
 7.12 Intr - 180240 180163   78  0  0   61   85    64 0.724   2.23
 7.11 Intr - 180811 180741   71  2  2   58  110    52 0.570   2.38
 7.10 Intr - 186583 186520   64  1  1   63  106    31 0.207  -0.23
 7.09 Intr - 191570 191469  102  2  0  109   68    83 0.377   7.85
 7.08 Intr - 196551 196524   28  2  1   78   87    15 0.003  -2.40
 7.07 Intr - 203854 203721  134  1  2   91   34    93 0.002   2.72
 7.06 Intr - 207181 207020  162  1  0   66    9   115 0.001   0.65
 7.05 Intr - 218615 218593   23  0  2  111  107     0 0.083   0.54
 7.04 Intr - 223049 222926  124  2  1   87   90    78 0.973   7.14
 7.03 Intr - 226889 226812   78  2  0   86   63    83 0.935   4.43
 7.02 Intr - 237539 237396  144  2  0  100   87   125 0.988  13.16
 7.01 Init - 244728 244513  216  0  0   68   77   151 0.864  10.96

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589r:83561790_83807679|GENSCAN_predicted_peptide_1|334_aa
MGQNGEDLLTAMVVELLNERFLAQDGCLELQPSSLYSRQQEGRREAAATAHKVYNPDIAG
LRVCQSPREAPNERSDVPKVQTTIISCLDYGSRFLTGLPASALASLHVFSTQQQVFLSVS
APAVAERGQHLALTVASEGGSPKPWQLPRGVEPVGAQKSGTEVWEPLPRFQKMYGNVWMP
RQKFAAGAGPSWRTSARAVWKGNVGLEPSHRVPTGALPSGTVKRGPPSSRPQNGRSTNSL
HCVPGKASDTQCQPVRAAGWEYAEPALSVNRITSGLFDAKGDQFPNSFLKFLHWPAVLPK
IPVIGKFSHQADIEEMGLGQSDFDRALRAVSLQV

>gi568815589r:83561790_83807679|GENSCAN_predicted_CDS_1|1005_bp
atgggccaaaatggagaagacctcttgactgccatggttgtagaactgcttaatgagcgt
ttcttggcccaagatggctgcttggagctccagccatcaagtctgtattccaggcagcag
gaaggaagaagagaggctgctgccaccgcccacaaagtttacaacccagacatagcagga
ctcagggtttgccagtctccccgagaggctccaaatgagagaagtgatgttcctaaggtc
caaaccaccatcatttcttgcctagattacggaagccgattcctaactggtctccctgct
tctgcccttgcctctcttcatgtgttctcaacacagcagcaagtgttcctgtcagtttct
gctccagctgtggctgaaaggggccaacatttagctctgaccgtggcttcagagggtgga
agccccaagccttggcagcttccacgtggtgttgagcctgtgggtgcacagaagtcagga
actgaggtttgggaacctctgcctagatttcagaagatgtatggaaatgtctggatgccc
aggcaaaagtttgctgcaggggcagggccctcatggagaacctctgctagggcagtgtgg
aaggggaatgtggggttggagccctcacacagagtccctactggggcactgcctagtgga
actgtgaaaagagggccaccgtcctccagaccccagaatggtagatccaccaacagcttg
cactgtgtgcctggaaaagcctcagacactcaatgccagcccgtgagagcagccggatgg
gagtatgcagagccagctctaagtgttaacagaataactagtggcttatttgatgcaaaa
ggagaccaatttcctaactcctttctcaaatttctccactggcctgccgtattgcctaaa
attcccgtaattggaaaattcagtcaccaggcagacattgaagaaatgggactgggacag
tcagattttgacagggcgctacgggcagtatctttgcaggtgtaa

>gi568815589r:83561790_83807679|GENSCAN_predicted_peptide_2|153_aa
MNVKPKGDKEAKGASALKESSPLKESFIEEAMEISMRLALISAFQRLISVWSFPPPRLLH
GGRRGICWKHYGKQPSRHSQSVIHIHSQSVTHINSQSVTHICSQFVTTHICSLFGTLSSE
TALPAAVAPTPAPFEVANLDQLRLCGPTPAKGD

>gi568815589r:83561790_83807679|GENSCAN_predicted_CDS_2|462_bp
atgaacgtgaagccaaagggagataaagaagccaaaggggcttcagcgttgaaagaatct
tctccactgaaggaatccttcatagaagaggccatggaaatatctatgaggcttgctctc
atatcagcattccagagactcatctctgtgtggtcctttcccccacctcgcctgctccat
ggagggaggagagggatatgttggaaacattacggcaaacaaccttccagacattcccaa
tctgtaatccacatccattcccaatctgtaactcacatcaattcccaatctgtaacccac
atctgttcccaatttgtaacaacccacatctgttccttatttggcacgcttagttccgaa
actgctcttcctgctgctgtagcccccacccctgctccatttgaagtagctaatctggat
cagcttagattgtgtggtccgaccccagccaaaggggactga

>gi568815589r:83561790_83807679|GENSCAN_predicted_peptide_3|100_aa
MLVQSGVKKGATKSVDHRQGQKEVSKPNRAQNQGNAVYQCLINKKYRYKKVSVLARAIRQ
EEEIKGIQIGKVEVTLSLFADDMITYPENPKDSSKKPLGT

>gi568815589r:83561790_83807679|GENSCAN_predicted_CDS_3|303_bp
atgttggtacagagcggagtgaaaaaaggggccactaagtcagtagaccacagacagggg
cagaaagaagtatctaaaccaaacagagcacaaaatcagggtaatgccgtctaccagtgt
ctgatcaacaagaaatacaggtataagaaagtatccgtcctagccagagcaatcagacaa
gaggaagaaataaagggcatccaaattggtaaagtggaagtcacattgtcactgtttgct
gatgacatgatcacatacccagaaaaccctaaagactcatccaaaaagcccctgggtaca
tga

>gi568815589r:83561790_83807679|GENSCAN_predicted_peptide_4|187_aa
MAAPGALLVMGVSGSGKSTVGALLASELGWKFYDADDYHPEENRRKMGKGIPLNDQDRIP
WLCNLHDILLRDVASGQRVVLACSALKKTYRDILTQGKDGVALKCEESGKEAKQAEMQLL
VVHLSGSFEVISGRLLKREGHFMPPELLQSQFETLEPPAAPENFIQISVDKNVSEIIATI
METLKMK

>gi568815589r:83561790_83807679|GENSCAN_predicted_CDS_4|564_bp
atggcggcgccgggcgcgctgctggtgatgggcgtgagcggctcggggaaatccaccgtg
ggcgccctgctggcatctgagctgggatggaaattctatgatgctgatgattatcacccg
gaggaaaatcgaaggaagatgggaaaaggcataccgctcaatgaccaggaccggattcca
tggctctgtaacttgcatgacattttactaagagatgtagcctcgggacagcgtgtggtt
ctagcctgttcagccctgaagaaaacgtacagagacatattaacacaaggaaaagatggt
gtagctctgaagtgtgaggagtcgggaaaggaagcaaagcaggctgagatgcagctcctg
gtggtccatctgagcgggtcgtttgaggtcatctctggacgcttactcaaaagagaggga
cattttatgccccctgaattattgcagtcccagtttgagactctggagcccccagcagct
ccagaaaactttatccaaataagtgtggacaaaaatgtttcagagataattgctacaatt
atggaaaccctaaaaatgaaatga

>gi568815589r:83561790_83807679|GENSCAN_predicted_peptide_5|724_aa
MTGKNRAIRPLQISNAKHIKITKYLAAILSPDPPPSGERRVDREAREGKAIVTARRGEHG
PAGHEVSPSHWLRLHFGQWSGKGKGTQAELKVAPAGDDSATPPGALPGVLRAAPAKGRGG
RGREEEAVAAADVAMAESGESGGPPGSQDSAAGAEGAGAPAAAASAEPKIMKVTVKTPKE
KEEFAVPENSSVQQYVYHLLDANHWPCRISISIPDEETKAQRQFKEEISKRFKSHTDQLV
LIFAGKILKDQDTLSQHGIHDGLTVHLVIKTQNRPQDHSAQQTNTAGSNVTTSSTPNSNS
TSGSATSNPFGLGGLGGLAGLSSLGLNTTNFSELQSQMQRQLLSNPEMMVQIMENPFVQS
MLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLELARNPAMMQEMMRNQDR
ALSNLESIPGGYNALRRMYTDIQEPMLSAAQEQFGGNPFASLVSNTSSGEGSQPSRTENR
DPLPNPWAPQTSQSSSASSGTASTVGGTTGSTASGTSGQSTTAPNLVPGVGASMFNTPGM
QSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQMQNPDTLSAMSNPRAMQALLQ
IQQGLQTLATEAPGLIPGFTPGLGALGSTGGSSGTNGSNATPSENTSPTAGTTEPGHQQF
IQQMLQALAGVNPQLQNPEVRFQQQLEQLSAMGFLNREANLQALIATGGDINAAIERLLG
SQPS

>gi568815589r:83561790_83807679|GENSCAN_predicted_CDS_5|2175_bp
atgacagggaaaaacagggcaatacgacccctccaaatatcaaacgctaagcatattaaa
ataacaaaatacctcgccgctattttatcaccagaccctcctcccagcggggaacgcaga
gtagacagagaggcaagggagggcaaggcgattgtgacagcgcggaggggtgaacacggc
ccagctgggcatgaggtaagtccttcacactggcttcgcctgcactttgggcaatggagc
gggaaaggaaaaggcacgcaggctgagctcaaagtcgcgccagccggggatgactcggcg
acgccgccaggcgcgttacccggcgtgctccgcgcggcgccggcgaagggacgtggggga
aggggcagggaggaggaagcggtggctgctgcggatgtcgccatggccgagagtggtgaa
agcggcggtcctccgggctcccaggatagcgccgccggagccgaaggtgctggcgccccc
gcggccgctgcctccgcggagcccaaaatcatgaaagtcaccgtgaagaccccgaaggaa
aaggaggaattcgccgtgcccgagaatagctccgtccagcagtatgtttatcatctctta
gatgccaatcattggccctgcagaataagtatctctattcctgatgaagaaaccaaggct
cagagacagtttaaggaagaaatctctaaacgttttaaatcacatactgaccaacttgtg
ttgatatttgctggaaaaattttgaaagatcaagataccttgagtcagcatggaattcat
gatggacttactgttcaccttgtcattaaaacacaaaacaggcctcaggatcattcagct
cagcaaacaaatacagctggaagcaatgttactacatcatcaactcctaatagtaactct
acatctggttctgctactagcaacccttttggtttaggtggccttgggggacttgcaggt
ctgagtagcttgggtttgaatactaccaacttctctgaactacagagtcagatgcagcga
caacttttgtctaaccctgaaatgatggtccagatcatggaaaatccctttgttcagagc
atgctctcaaatcctgacctgatgagacagttaattatggccaatccacaaatgcagcag
ttgatacagagaaatccagaaattagtcatatgttgaataatccagatataatgagacaa
acgttggaacttgccaggaatccagcaatgatgcaggagatgatgaggaaccaggaccga
gctttgagcaacctagaaagcatcccagggggatataatgctttaaggcgcatgtacaca
gatattcaggaaccaatgctgagtgctgcacaagagcagtttggtggtaatccatttgct
tccttggtgagcaatacatcctctggtgaaggtagtcaaccttcccgtacagaaaataga
gatccactacccaatccatgggctccacagacttcccagagttcatcagcttccagcggc
actgccagcactgtgggtggcactactggtagtactgccagtggcacttctgggcagagt
actactgcgccaaatttggtgcctggagtaggagctagtatgttcaacacaccaggaatg
cagagcttgttgcaacaaataactgaaaacccacaactgatgcaaaacatgttgtctgcc
ccctacatgagaagcatgatgcagtcactaagccagaatcctgaccttgctgcacagatg
cagaatcctgatacactatcagcaatgtcaaaccctagagcaatgcaggccttgttacag
attcagcagggtttacagacattagcaacggaagccccgggcctcatcccagggtttact
cctggcttgggggcattaggaagcactggaggctcttcgggaactaatggatctaacgcc
acacctagtgaaaacacaagtcccacagcaggaaccactgaacctggacatcagcagttt
attcagcagatgctgcaggctcttgctggagtaaatcctcagctacagaatccagaagtc
agatttcagcaacaactggaacaactcagtgcaatgggatttttgaaccgtgaagcaaac
ttgcaagctctaatagcaacaggaggtgatatcaatgcagctattgaaaggttactgggc
tcccagccatcatag

>gi568815589r:83561790_83807679|GENSCAN_predicted_peptide_6|166_aa
MMLDKKQIRAIFLFKFKMGHKAAETTHNISNTFGPGTANERTVQWWFKKFHKGEESLEDE
EHSGQPSEVDSDQLRAIIEADPLITTPEVAEELNIDHSTVVRHLKQIGKVKKLALGKLNE
LGYEVLPHPPYSPDLSPTDYHFFKHLDNFLQGKRFHNQQDAEHAFQ

>gi568815589r:83561790_83807679|GENSCAN_predicted_CDS_6|501_bp
atgatgttagacaaaaagcaaattcgagcaattttcttattcaagttcaaaatgggtcat
aaagcagcggagacaactcacaacatcagcaacacatttggcccaggaactgctaatgaa
cgcacagtgcagtggtggttcaagaagtttcacaaaggagaggagagccttgaagatgag
gagcatagtggccagccatcggaagttgacagtgaccaattgagagcaatcatcgaagct
gatcctcttataactacacctgaagttgctgaagaactcaacattgaccattctacagtc
gttcggcatttgaagcaaattggaaaggtgaaaaagcttgcacttgggaaattgaacgaa
ttgggctacgaagttttgcctcatcctccatattcacctgacctctcgccaaccgactac
cacttcttcaagcatcttgacaactttttgcagggaaaacgcttccacaaccagcaggat
gcagaacatgctttccaatag

>gi568815589r:83561790_83807679|GENSCAN_predicted_peptide_7|423_aa
MASAVLSSVPTTASRFALLQVDSGSGSDSEPGKGKGRNTGKSQTLGSKSTTNEKKREKRR
KKKEQQQSEANELRNLAFKKIPQKSSHAVCNAQHDLPLSNPVQKDSREENWQEWRQRDEQ
LTSEMFEADLEKALLLSKLEYEEHKKEYEDAENTSTQSKVMNKKDKRKNHQGKDRPLTVS
LKDFHSEDHISKKTEELSSSQTLSHDGGFFNRLEDDVHKILIREKRREQLTEYNGTDNCT
AHEHNQACKVLLIKEMCSHGVGQLCLCGFAGYSLHLLAAFTAGIECLQLFRCKPCYILPN
QHAEVVLKDGRIERLKLELERKDAEIQKLKNVITQWEAKYKEVKARNAQLLKMLQEGEMK
DKAEILLQVDESQSIKNELTIQVTSLHAALEQERSKVKVLQAELAKYQGGRKGKRNSESD
QCR

>gi568815589r:83561790_83807679|GENSCAN_predicted_CDS_7|1272_bp
atggcctcagcagtacttagttctgttcccaccaccgcttctcgttttgccctgttacaa
gtggatagtggcagtggctctgattctgaacctggaaaaggtaaaggtcgaaatactgga
aagtctcaaactttaggaagcaagtcaactacaaatgagaaaaaaagagagaaaagaaga
aaaaagaaggaacagcaacagagtgaagcaaatgagctcaggaatcttgcttttaagaaa
attccccagaaatcctcccatgctgtttgtaacgctcaacatgatcttccattgtcaaac
ccagtacagaaggattcacgagaagaaaattggcaagagtggagacaaagagatgagcag
ctgacatctgaaatgtttgaagcagatcttgagaaggcattgttactaagtaaactagaa
tatgaagagcacaaaaaggagtatgaagatgctgaaaatacttcaactcagtccaaagtt
atgaataaaaaagataaaagaaagaatcatcagggaaaagacagacctctcacagtatca
ctaaaagattttcattcggaagatcacattagtaaaaagactgaggaattgagttcttct
cagactttatcacatgatggaggattcttcaatagactggaagatgatgttcataaaatt
cttattagagaaaaacgaagagaacagcttacagaatataatggaacagataattgtaca
gctcatgaacacaaccaggcatgtaaagtcttgctgattaaagagatgtgctcccatggt
gttgggcaactctgcctctgtggctttgcagggtacagcctccacttactggctgctttc
acggctggcattgagtgtctgcagcttttccggtgcaaaccgtgttatatcctgccaaat
caacatgctgaagtggttctgaaagatggaagaattgaaagactaaagttagagcttgaa
aggaaagatgctgaaatccagaagctgaaaaatgtaatcactcaatgggaggcaaagtat
aaggaagtaaaggcaagaaatgcacaattattgaaaatgcttcaggaaggtgaaatgaaa
gataaggcagaaatacttctgcaagttgatgaatcacaaagtatcaagaatgagctcact
attcaggtgacttcacttcatgctgcattagaacaagaaagatctaaagtgaaagtatta
caagcagagttagccaaataccagggtggcagaaaagggaaaagaaactctgaatccgac
cagtgtaggtga