GENSCAN 1.0 Date run: 4-Nov-116 Time: 10:06:11 Sequence gi568815595f:159889057_160095556 : 206500 bp : 42.71% C+G : Isochore 1 ( 0 - 43 C+G%) Parameter matrix: HumanIso.smat Predicted genes/exons: Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr.. ----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------ 1.01 Intr + 3041 3134 94 0 1 82 82 177 0.860 14.60 1.02 Intr + 22537 22685 149 1 2 88 68 34 0.005 0.36 1.03 Intr + 53574 53703 130 1 1 55 87 52 0.227 0.63 1.04 Term + 54384 54639 256 0 1 62 38 225 0.644 8.97 1.05 PlyA + 55705 55710 6 -0.45 2.00 Prom + 57833 57872 40 -3.05 2.01 Init + 63182 63217 36 1 0 91 116 22 0.724 5.36 2.02 Intr + 76135 76263 129 0 0 87 74 28 0.015 1.27 2.03 Term + 82265 82735 471 1 0 52 42 296 0.931 15.34 2.04 PlyA + 83052 83057 6 1.05 3.00 Prom + 88976 89015 40 -4.05 3.01 Init + 89817 89949 133 2 1 86 62 31 0.105 0.65 3.02 Intr + 101111 101256 146 0 2 133 105 96 0.760 14.88 3.03 Intr + 103956 104069 114 2 0 106 70 73 0.979 7.02 3.04 Intr + 104645 104788 144 1 0 77 110 120 0.984 12.66 3.05 Intr + 112202 112406 205 1 1 29 110 146 0.426 8.75 3.06 Intr + 123756 123884 129 1 0 104 31 77 0.346 3.35 3.07 Intr + 130835 131276 442 0 1 43 62 205 0.482 4.99 3.08 Intr + 131590 131688 99 1 0 138 119 -2 0.661 6.21 3.09 Intr + 137554 137642 89 1 2 64 57 110 0.010 4.20 3.10 Intr + 149836 150126 291 2 0 81 85 193 0.760 14.48 3.11 Term + 158763 159094 332 1 2 15 34 290 0.228 10.13 3.12 PlyA + 160240 160245 6 1.05 4.06 PlyA - 163400 163395 6 1.05 4.05 Term - 171449 171243 207 2 0 104 53 60 0.347 0.46 4.04 Intr - 171972 171763 210 0 0 33 97 124 0.601 5.99 4.03 Intr - 181198 181082 117 1 0 41 73 73 0.434 0.84 4.02 Intr - 185729 185552 178 1 1 80 44 107 0.509 4.50 4.01 Init - 204561 204485 77 0 2 70 96 57 0.167 5.31 Suboptimal exons with probability > 0.800 Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr.. ----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------ S.001 Term - 180501 180358 144 0 0 -12 49 183 0.833 1.33 Predicted peptide sequence(s): Predicted coding sequence(s): >gi568815595f:159889057_160095556|GENSCAN_predicted_peptide_1|209_aa XLNEELVQLLLIRDELHTEQDAMLVDIEDLTSSIPELFCILSRHFPPASGRHFKSIPMIV SPKTALSPVSSCSANSPTIYPGSCTEFWVQTPGEPILSKWPHSVLPLQLDHTKMSQSHHL SLAKLRCNTGGEGLSPLSPLNVNFPSNNVLTEIALRLILRTEETMAVAAPVQTLQRWSLE PTAATEILEKGSRRAMETLRDFEERRILR >gi568815595f:159889057_160095556|GENSCAN_predicted_CDS_1|630_bp ngcttgaatgaagagttggtccagctgcttctcatccgagatgagctgcacacagagcag gatgccatgctggtggacattgaagacttgaccagctccatccctgagctcttctgcatt ctaagccggcatttcccacctgcttctggaagacatttcaaatctattcccatgattgtt tcccctaaaactgctctttctcctgtttcctcttgttcagcaaacagccctaccatctac ccagggtcgtgcactgagttttgggtgcagacccccggtgaacccatactgagcaagtgg ccccactctgtgctcccattgcaacttgaccatacaaagatgtcacaatctcatcacttg tctctcgccaaattgagatgtaacactggaggggagggcctatctcctctcagtccgcta aatgtgaacttccccagcaataatgtcctcaccgagatagctttaagattaatccttaga acagaggagaccatggcagtagcagctcctgttcagaccctgcagagatggagtctggag cctacagcagccacagaaatacttgaaaagggatcaagaagagcgatggagactctcaga gactttgaggaaaggagaatcctgagatga >gi568815595f:159889057_160095556|GENSCAN_predicted_peptide_2|211_aa MGLELGLGSQKKLFSFLVDSPVLWMHPPIAFLRKNESEVNLRYFANAYPHLINNLPQPPR LIRSPEGNPKQSIPDYVLSPLAMSTVPYTDSRHSQLPSHTSNTAKEVLCSLDSSFSLAAE CVSVPCGLGPMELLEDPGFQVPAVLGSQPKVQLVVGMGQMLHQLAAWNHCPDTEHILSLI LWLMDFFSDTPPKTHALSSHDRFLTTLKFMV >gi568815595f:159889057_160095556|GENSCAN_predicted_CDS_2|636_bp atggggcttgagttgggtcttggatctcagaaaaagctcttctctttcttggttgactcc ccagttttgtggatgcacccaccaatagccttcctaagaaagaatgaatcagaggtaaat ttacgatattttgcaaatgcctatcctcatttgattaataacttgcctcaacctcctagg ctcattcgatcccctgaagggaaccctaagcagagtattcctgactatgtgctgtcacca ttagcaatgagcaccgttccctacactgattcgcggcactcccagcttcctagccacacc tcaaacacagccaaagaggtgctctgcagcctggacagctccttcagtttggcagcagag tgcgtctctgtgccatgtggtcttgggcctatggagttgctggaggaccctgggttccag gtgcccgccgtacttggatcacagcctaaggtgcaattggttgtgggaatggggcagatg cttcaccagctggcagcttggaatcattgtcctgacactgagcacatactgtcacttatt ttgtggctgatggatttttttagtgacactcctccaaaaacgcatgccctttcttcacac gaccgcttcctcactactttgaagttcatggtgtaa >gi568815595f:159889057_160095556|GENSCAN_predicted_peptide_3|707_aa MQIIQMLKLSDTEYKITLINMFKKTDDKMENFTRELKSKCFFKKGLLLVATLVLLDHLSL ARNLPVATPDPGMFPCLHHSQNLLRAVSNMLQKARQTLEFYPCTSEEIDHEDITKDKTST VEACLPLELTKALCLSSIYEDLKMYQVEFKTMNAKLLMDPKRQIFLDQNMLAVIDELMQV ADVLETHSCTTASRNPNNDLICWFPSYPTRSKSEALQGSSVSPRNPSPLNDPTTAAPLLN ILPVRVPVLETFKGSSECLTITRAHRAQKMPSHDSTSANPPKLLLWNKLQVWATGQDFER KKRKKERKKERKKERKKERKKERKKERKKERKKERKKERKKERKKEGKKEGRKEGRKEGR KEGKQASKREREKERNKQRNKEERKKEKKVRKRRKRERKEGWKEGRREREKERRRKERKK ERKEGGKAGRQALTPGFREWATPGTLHILAFVSCLSPLECKLQRNCIRSTWLRRPRASRH TRTGTRMGAQKFQDLTLERPARRLRLPAPHDLCGLGALSSVAAGLQAGACAENDCGRGSR AQHCTARRPTADMWGDWVDRKTRRAFVAAGRDSLGSLNQARVGGDPVPVHRPASAQPDSP EAREPDLVMLPSGTTPTSLQRGDEPSAWVTRHQARTDTCTANSGQLTSQQSRQRRVPRRR GRDHMKMEAEIATMQSQGKKQWNNQKLEETRQNSSLQPVTNSALPTP >gi568815595f:159889057_160095556|GENSCAN_predicted_CDS_3|2124_bp atgcagattatccagatgctaaaattgtcagatacagaatataaaataacactgattaat atgtttaagaaaacagatgacaaaatggagaatttcaccagagaattgaaatctaagtgt ttttttaaaaaaggcctcctccttgtggctaccctggtcctcctggaccacctcagtttg gccagaaacctccccgtggccactccagacccaggaatgttcccatgccttcaccactcc caaaacctgctgagggccgtcagcaacatgctccagaaggccagacaaactctagaattt tacccttgcacttctgaagagattgatcatgaagatatcacaaaagataaaaccagcaca gtggaggcctgtttaccattggaattaaccaaggccctgtgccttagtagtatttatgaa gacttgaagatgtaccaggtggagttcaagaccatgaatgcaaagcttctgatggatcct aagaggcagatctttctagatcaaaacatgctggcagttattgatgagctgatgcaggtt gcagatgtcttagaaacacattcctgcaccacagcttcaagaaatccaaataatgacctg atctgctggtttccaagctaccctaccaggagcaagtcagaggccctgcagggctcctcg gtaagccctcgaaatccctctcccctcaatgaccccaccacagcagctccacttttgaat attttaccagtgcgtgttccagtcctagaaacttttaaaggatcctctgagtgtctgaca atcaccagggcccatagagctcagaaaatgccctcccatgactccacttctgcaaatcct ccaaagctgcttctttggaataagctacaagtctgggcaacagggcaagacttcgaaaga aagaaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaag aaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaag aaagaaagaaagaaagaaggaaagaaggaaggaaggaaggaaggaaggaaggaaggaagg aaggaaggaaagcaagcaagcaagcgagagagagagaaagaaagaaacaaacaaagaaac aaagaagaaagaaagaaagagaagaaagtgagaaagagaagaaagagagaaaggaaggaa ggatggaaggaaggaaggagagagagagagaaagaaagaagaaggaaagaaagaaagaaa gaaaggaaagaaggagggaaggcaggcaggcaggcactgacacctggtttcagggaatgg gccactcctggcaccctgcacattttagcatttgtttcctgtctctccccactagaatgc aagctgcagaggaattgtatccgtagcacctggcttcgcagaccaagagcaagtcggcac accaggacaggcactcgcatgggtgcccagaagtttcaagatctgaccttggagagacca gccaggaggctgcgcttacctgctccgcacgacctctgcggcttgggggctctcagctct gtcgctgcggggctccaggctggtgcttgtgctgagaatgactgcgggaggggctcgcgt gcccagcactgcaccgcgaggcgaccaaccgctgacatgtggggcgattgggtggacagg aagactcggcgagcttttgtagccgcgggtagggacagcctgggctccctgaaccaagcg cgcgtgggcggcgaccccgtccctgtgcaccgacccgccagcgcgcagcctgactctcca gaggctagagagccagatttggtgatgttgccatcaggtacaacacccacatcactccag agaggggacgagcccagtgcctgggttaccaggcaccaggcaagaacagacacctgcact gctaacagtgggcagctgacttcacagcagagccgccagagaagagtcccacgaagaaga ggaagagatcacatgaagatggaggcagaaattgcaactatgcagtcacaaggcaagaaa cagtggaacaatcagaagctggaagagacaaggcagaattcttctttacagcctgtgacg aactcagccctgccgacaccttga >gi568815595f:159889057_160095556|GENSCAN_predicted_peptide_4|262_aa MAAELGLMGKIMWVLTRDQGQQIKARHSTPWPQGPVVTAPVCSAQETLPLEIHRTPRKAL MKGGVKTVQLLWKVPVWKECGVSTQEHTQMYTKACGKMLKTSLSSLPKTGSNQTPLTVEE QIKELDIKVLQVPARLRSPAGFTQWTLHRGYRWSCLPVPHLRLHFSALGRSMGLRAVEQG AALVAGAQATQEPKGEGAGSSLGHPRKGLLQCSGRLKSSSSVARVGAEAEEVPRVSEGCE GFEGCQHAVTSQHHCTPIWVTE >gi568815595f:159889057_160095556|GENSCAN_predicted_CDS_4|789_bp atggcagccgagttaggcctcatgggcaagatcatgtgggtcttgaccagagatcaaggc cagcaaattaaagccagacactcaacaccctggccacagggccctgtggtgactgcaccc gtgtgctcagcccaggagactcttcctctggagatccataggaccccaaggaaggcactg atgaaaggaggtgtgaagacagtccagttactctggaaggtccctgtgtggaaggaatgt ggggtcagcacacaggagcacacacagatgtacaccaaagcctgtggcaagatgctcaaa actagtttgtcatcactgccaaaaacgggaagtaatcaaactcctttaacagtggaagaa cagatcaaggagctagacataaaggttctccaagtccccgctagactcaggagcccagct ggcttcacccagtggaccctgcacaggggctacaggtggagctgcctgccagtccctcac ctgcgcctgcacttctcagcccttgggcggtctatgggactccgtgctgtggagcagggg gcggcactcgtggcgggggctcaggccacgcaggagcccaagggtgagggagccggctcc agcctcggccatcccaggaaggggctcctacagtgcagcggcaggctgaagagctcctca agtgtggccagagtgggcgccgaggccgaggaggtgccaagagtgagcgagggatgcgag ggctttgagggctgccagcacgctgtcacctctcaacaccactgcactccaatctgggtg acagagtga